Rorug04G0423200

ADP-ribosylation factor GTPase-activating protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
58246326 .. 58252580
6255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0423200.1

Sequence Viewer

Length: 2568 bp
ATGGTGTCGAAATCGTATTCCAATCTGTTGGAGCTTGCCTCGGGCGAGTCCCCTACCTTGGGCCGAATTGGCCGGGGGAGAATGCCACGCATCATGACTGTTGCTGGCTTGATATCTGATGTTGATGATGACAAGTCGGAGAGTGCGTGCTCCGAGGTGTCCTCATCGTCGGTCCATCGTGACCGAATCATTATAGTGGCAAATCAGCTGCCCATTAGGGCTCAGAGAAAAGAAGATTCTAGCAAGGGTTGGATATTCAGTTGGGATGAGAATTCTCTGCTACTCCAACTCAAAGATGGTTTAGGGGATGATGAGATTGAGGTGATTTATGTGGGTTGTCTTAAGGAAGACATTCACCCCAATGACCAAGATGAGGTTTCCCAAATCCTCCTTGACACCTTTAAGTGTGTCCCAACCTTTCTCCCACCAGAGCTTTTCAGCCGGTATTATCATGGATTTTGCAAGCAACAGTTGTGGCCACTCTTTCATTACATGCTACCCCTCTCGCCCGACCTTGGTGGTAGGTTTAACCGGTCCCTGTGGCAAGCGTATGTATCAGTGAACAAGATTTTTGCGGATAGGATCATGGAAGTCATTAACCCTGAAGATGACTTTGTGTGGATACATGACTATCATCTGATGGTGTTACCAACTTTCTTGCGCAAGAGATTCAATCGCGTCAAACTTGGGTTTTTCCTCCATAGCCCTTTCCCTTCATCAGAAATTTACAAGACATTGCCTATTAGAGAAGAGATTCTACGAGCCCTTTTGAATTCTGATTTAATTGGATTCCATACATTTGACTATGCAAGGCATTTCCTCTCCTGCTGTAGTCGAATGCTTGGTCTTACCTATGAATCCAAGCGAGGTTATATAGGCCTCGAGTATTATGGTCGCACTGTTAGCATCAAAATTCTTCCCGTTGGCATACATATGGGTCAACTGCAGTCAGTTTTGAGTCTCCCAGAGACAGAAGCCAAGGTTGCTGAGCTCAAGACACAGTTCTGTGATCGGGGCAGGACAATGTTACTCGGAGTCGATGACATGGATATATTTAAGGGCATAAGTTTGAAGCTTTTGGCAATGGAGCAGCTGCTTATTCAGCACCCTGAGTGGCAGGGAAAGGTCGTATTGGTGCAGATAGCCAATCCAGCCAGGGGTCGGGGAAAAGATGTGAAAGAAGTTCAGGCCGAGACATCATCAACTGTGAAGCGAATTAATGAAACATTTGGCAAACCTGGGTATAAGCCTGTTGTCTTGATTGATGAGCCACTTAAGTTTTATGAGAGAATTGCATACTATGTAGTTGCAGAGTGTTGTTTGGTTACAGCTGTCAGGGATGGAATGAATTTGATACCATATGAATACATTATTAGTCGTCAAGGAAATGAAAAATTGGATAAGGTTTTGGGATTGGATTCCTCTGTTCCCAAGAAGAGTATGTTAGTTGTCTCTGAGTTCATTGGCTGCTCCCCTTCTTTGAGTGGAGCAATTCGTGTGAACCCCTGGAATATTGATGCTGTGGCAGATGCAATGGACTGTTCTCTGGAGATGGCAGAGCCAGAAAAACAGCTTCGGCATGAGAAACATTATAAATATGTCAGCACCCATGATGTTGGTTACTGGGCTCGCAGTTTCCTCCAAGACTTGGAAAGAACATGCAAGGGTCATTTGCGTCAAAGGTGCTGGGGTATTGGGTTTGGGTTGAGTTTTAGAGTTGTGGCTCTTGATCCAAACTTCAAGAAGCTCTCTGTGGAATACATAGTGTCAGCCTATAAAAGAACTACAACTAGGGCAATTCTTCTCGACTATGATGGCACATTGAAGCCTCAGGCATCCATTGATAAGAGTCCAAATTCTAAATCCATCGAAATCCTAAATAGCCTATGCAGGGACAAGAACAACATGGTTTTAATTGTTAGTGCTAAGAGTCGAAAAACACTTGCCGAGTGGTTCTCTCCTTGTGAGAAGCTTGGAATTGCAGCTGAGCATGGCTACTTTCTACGGTCGAAGCAAGATACAGAATGGGAGACATTGGTACCAGTTGCAGACAGTAGCTGGAAGCAGATTGCAGAGCCCGTCATGAAGCTTTACACAGAAACAACTGATGGTTCCACCATTGAAGATAAGGAAACTTCACTTCTCTGGTGTTATGAGGATGCAGATCCAGACTTTGGATCATGCCAAGCCAAGGAACTTATGGATCATCTTGAAAGTGTGCTTGCTAATGAACCCGTTACTGTTAAAAGTGGGCAGACTTTTGTGGAGGTTAAACCACAGGGTGTAAGCAAGGGTCTGGTAGCCAAACGTCTACTTTCCACCATGCAGGAAAGGGGAATGCTACCAGACTTTGTTCTCTGCATAGGGGATGATCGATCTGATGAAGACATGTTTGAGGTAATTACAAGTTCCATGGAAGGCCCATCAATTGCTCCCAGAGCAGAGGTATTCGCGTGTACAGTTTGTCGAAAACCCAGCAAAGCCAAGTATTATCTAGATGACACGGTGGAGATTGTTAGGATGCTGCAGGGTTTGGCATCTGTTTCTGAGCAAAGCATACCTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

855

Amino Acids

96.77

Weight (kDa)

5.84

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_20 PF00982 62 - 551 5.1e-186 Glycosyltransferase family 20
Trehalose_PPase PF02358 601 - 835 1.1e-79 Trehalose-phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1593
Acc16I TGCGCA 1 cut(s) 662
Acc65I GGTACC 1 cut(s) 2038
AccB1I GGYRCC 1 cut(s) 2038
AccB7I CCANNNNNTGG 2 cut(s) 1648, 2174
AccI GTMKAC 1 cut(s) 2311
AccII CGCG 2 cut(s) 678, 2453
AciI CCGC 1 cut(s) 575
AclWI GGATC 5 cut(s) 590, 1724, 2159, 2185, 2211
AcoI YGGCCR 2 cut(s) 70, 476
AcsI RAATTY 6 cut(s) 271, 723, 772, 912, 1348, 1855
AcuI CTGAAG 1 cut(s) 624
AdeI CACNNNGTG 1 cut(s) 2282
AfaI GTAC 2 cut(s) 2040, 2458
AflII CTTAAG 2 cut(s) 341, 1274
AflIII ACRYGT 1 cut(s) 2388
AgeI ACCGGT 1 cut(s) 531
AgsI TTSAA 7 cut(s) 673, 772, 1072, 1741, 1825, 2123, 2213
AjnI CCWGG 3 cut(s) 1154, 1237, 1505
Alw21I GWGCWC 2 cut(s) 152, 993
Alw26I GTCTC 5 cut(s) 962, 965, 1187, 1456, 2024
AlwI GGATC 5 cut(s) 590, 1724, 2159, 2185, 2211
AlwNI CAGNNNCTG 1 cut(s) 2058
Ama87I CYCGRG 2 cut(s) 40, 881
AoxI GGCC 6 cut(s) 61, 70, 476, 877, 1188, 2419
ApeKI GCWGC 6 cut(s) 208, 1090, 1093, 1467, 1982, 2524
ApoI RAATTY 6 cut(s) 271, 723, 772, 912, 1348, 1855
ArsI GACNNNNNNTTYG 2 cut(s) 829, 861
AseI ATTAAT 1 cut(s) 1218
AsiGI ACCGGT 1 cut(s) 531
Asp700I GAANNNNTTC 2 cut(s) 351, 753
Asp718I GGTACC 1 cut(s) 2038
AspLEI GCGC 1 cut(s) 663
AspS9I GGNCC 4 cut(s) 61, 172, 534, 2420
AsuC2I CCSGG 1 cut(s) 74
AsuHPI GGTGA 2 cut(s) 334, 347
AvaI CYCGRG 2 cut(s) 40, 881
AvaII GGWCC 2 cut(s) 172, 534
AxyI CCTNAGG 1 cut(s) 1830
BaeI ACNNNNGTAYC 2 cut(s) 2022, 2055
BalI TGGCCA 1 cut(s) 478
BanI GGYRCC 1 cut(s) 2038
BanII GRGCYC 5 cut(s) 223, 766, 993, 1630, 2079
BarI GAAGNNNNNNTAC 2 cut(s) 741, 773
BbsI GAAGAC 2 cut(s) 354, 2391
Bbv12I GWGCWC 2 cut(s) 152, 993
BbvI GCAGC 6 cut(s) 195, 1080, 1102, 1454, 1994, 2511
BccI CCATC 9 cut(s) 183, 290, 634, 1334, 1546, 1808, 1874, 2102, 2431
BciT130I CCWGG 3 cut(s) 1156, 1239, 1507
BciVI GTATCC 1 cut(s) 615
BcnI CCSGG 1 cut(s) 74
BcoDI GTCTC 5 cut(s) 962, 965, 1187, 1456, 2024
BfaI CTAG 3 cut(s) 240, 1791, 2495
BfmI CTRYAG 4 cut(s) 829, 944, 2525, 2564
BfrI CTTAAG 2 cut(s) 341, 1274
BfuI GTATCC 1 cut(s) 615
BglI GCCNNNNNGGC 1 cut(s) 69
BisI GCNGC 6 cut(s) 209, 1091, 1094, 1468, 1983, 2525
BlpI GCTNAGC 2 cut(s) 987, 1986
BlsI GCNGC 6 cut(s) 210, 1092, 1095, 1469, 1984, 2526
Bme1390I CCNGG 4 cut(s) 74, 1156, 1239, 1507
Bme18I GGWCC 2 cut(s) 172, 534
BmeT110I CYCGRG 2 cut(s) 40, 881
BmgT120I GGNCC 4 cut(s) 61, 172, 534, 2420
BmiI GGNNCC 3 cut(s) 536, 2040, 2113
BmrFI CCNGG 4 cut(s) 74, 1156, 1239, 1507
BmrI ACTGGG 1 cut(s) 1633
BmsI GCATC 8 cut(s) 99, 915, 1507, 1519, 1844, 2149, 2511, 2546
BmuI ACTGGG 1 cut(s) 1633
BpiI GAAGAC 2 cut(s) 354, 2391
BplI GAGNNNNNCTC 6 cut(s) 23, 55, 146, 178, 1940, 1972
BpmI CTGGAG 1 cut(s) 1568
Bpu1102I GCTNAGC 2 cut(s) 987, 1986
BpuEI CTTGAG 1 cut(s) 977
BpuMI CCSGG 1 cut(s) 74
Bsa29I ATCGAT 1 cut(s) 2374
BsaBI GATNNNNATC 1 cut(s) 2163
BsaWI WCCGGW 1 cut(s) 531
BsaXI ACNNNNNCTCC 2 cut(s) 131, 161
Bse118I RCCGGY 2 cut(s) 441, 531
Bse1I ACTGG 2 cut(s) 1628, 2042
Bse21I CCTNAGG 1 cut(s) 1830
Bse3DI GCAATG 3 cut(s) 734, 1089, 1539
Bse8I GATNNNNATC 1 cut(s) 2163
BseBI CCWGG 3 cut(s) 1156, 1239, 1507
BseCI ATCGAT 1 cut(s) 2374
BseGI GGATG 7 cut(s) 271, 313, 1345, 1835, 2164, 2374, 2526
BseJI GATNNNNATC 1 cut(s) 2163
BseMI GCAATG 3 cut(s) 734, 1089, 1539
BseMII CTCAG 7 cut(s) 236, 978, 1101, 1446, 1844, 1977, 2538
BseNI ACTGG 2 cut(s) 1628, 2042
BseXI GCAGC 6 cut(s) 195, 1080, 1102, 1454, 1994, 2511
BseYI CCCAGC 2 cut(s) 1686, 2474
BsgI GTGCAG 1 cut(s) 1157
Bsh1236I CGCG 2 cut(s) 678, 2453
Bsh1285I CGRYCG 1 cut(s) 2009
BshFI GGCC 6 cut(s) 63, 72, 478, 879, 1190, 2421
BshNI GGYRCC 1 cut(s) 2038
BshTI ACCGGT 1 cut(s) 531
BshVI ATCGAT 1 cut(s) 2374
BsiEI CGRYCG 1 cut(s) 2009
BsiHKAI GWGCWC 2 cut(s) 152, 993
BsiHKCI CYCGRG 2 cut(s) 40, 881
BsiSI CCGG 3 cut(s) 73, 442, 532
BslFI GGGAC 4 cut(s) 34, 395, 520, 1907
BsmAI GTCTC 5 cut(s) 962, 965, 1187, 1456, 2024
BsmFI GGGAC 4 cut(s) 34, 395, 520, 1907
BsmI GAATGC 3 cut(s) 87, 843, 2343
BsnI GGCC 6 cut(s) 63, 72, 478, 879, 1190, 2421
BsoBI CYCGRG 2 cut(s) 40, 881
Bsp1286I GDGCHC 6 cut(s) 152, 223, 766, 993, 1630, 2079
Bsp1407I TGTACA 1 cut(s) 2456
Bsp143I GATC 8 cut(s) 582, 1009, 1729, 2164, 2177, 2203, 2371, 2375
Bsp1720I GCTNAGC 2 cut(s) 987, 1986
Bsp19I CCATGG 1 cut(s) 2412
BspACI CCGC 1 cut(s) 575
BspANI GGCC 6 cut(s) 63, 72, 478, 879, 1190, 2421
BspCNI CTCAG 7 cut(s) 235, 979, 1102, 1447, 1843, 1978, 2539
BspDI ATCGAT 1 cut(s) 2374
BspFNI CGCG 2 cut(s) 678, 2453
BspHI TCATGA 2 cut(s) 93, 2082
BspLI GGNNCC 3 cut(s) 536, 2040, 2113
BspMAI CTGCAG 2 cut(s) 948, 2529
BspPI GGATC 5 cut(s) 590, 1724, 2159, 2185, 2211
BspT107I GGYRCC 1 cut(s) 2038
BspTI CTTAAG 2 cut(s) 341, 1274
BsrDI GCAATG 3 cut(s) 734, 1089, 1539
BsrFI RCCGGY 2 cut(s) 441, 531
BsrGI TGTACA 1 cut(s) 2456
BsrI ACTGG 2 cut(s) 1628, 2042
BssAI RCCGGY 2 cut(s) 441, 531
BssMI GATC 8 cut(s) 582, 1009, 1729, 2164, 2177, 2203, 2371, 2375
BssT1I CCWWGG 5 cut(s) 57, 514, 978, 2190, 2412
Bst2UI CCWGG 3 cut(s) 1156, 1239, 1507
Bst6I CTCTTC 2 cut(s) 744, 1430
BstAFI CTTAAG 2 cut(s) 341, 1274
BstAUI TGTACA 1 cut(s) 2456
BstC8I GCNNGC 7 cut(s) 36, 106, 148, 464, 546, 1630, 2223
BstDEI CTNAG 8 cut(s) 222, 987, 1110, 1455, 1830, 1926, 1986, 2547
BstDSI CCRYGG 1 cut(s) 2412
BstF5I GGATG 7 cut(s) 271, 313, 1345, 1835, 2164, 2374, 2526
BstFNI CGCG 2 cut(s) 678, 2453
BstHHI GCGC 1 cut(s) 663
BstKTI GATC 8 cut(s) 585, 1012, 1732, 2167, 2180, 2206, 2374, 2378
BstMAI GTCTC 5 cut(s) 962, 965, 1187, 1456, 2024
BstMBI GATC 8 cut(s) 582, 1009, 1729, 2164, 2177, 2203, 2371, 2375
BstMCI CGRYCG 1 cut(s) 2009
BstMWI GCNNNNNNNGC 6 cut(s) 69, 903, 983, 1102, 1151, 2438
BstNI CCWGG 3 cut(s) 1156, 1239, 1507
BstNSI RCATGY 3 cut(s) 496, 1662, 2392
BstSCI CCNGG 4 cut(s) 72, 1154, 1237, 1505
BstSFI CTRYAG 4 cut(s) 829, 944, 2525, 2564
BstUI CGCG 2 cut(s) 678, 2453
BstV1I GCAGC 6 cut(s) 195, 1080, 1102, 1454, 1994, 2511
BstV2I GAAGAC 2 cut(s) 354, 2391
BstX2I RGATCY 1 cut(s) 2164
BstXI CCANNNNNNTGG 2 cut(s) 28, 1616
BstYI RGATCY 1 cut(s) 2164
Bsu15I ATCGAT 1 cut(s) 2374
Bsu36I CCTNAGG 1 cut(s) 1830
BsuI GTATCC 1 cut(s) 615
BsuRI GGCC 6 cut(s) 63, 72, 478, 879, 1190, 2421
BsuTUI ATCGAT 1 cut(s) 2374
BtgI CCRYGG 1 cut(s) 2412
BtsCI GGATG 7 cut(s) 271, 313, 1345, 1835, 2164, 2374, 2526
BtsIMutI CAGTG 2 cut(s) 564, 897
Cac8I GCNNGC 7 cut(s) 36, 106, 148, 464, 546, 1630, 2223
CaiI CAGNNNCTG 1 cut(s) 2058
CciI TCATGA 2 cut(s) 93, 2082
CfoI GCGC 1 cut(s) 663
Cfr10I RCCGGY 2 cut(s) 441, 531
Cfr13I GGNCC 4 cut(s) 61, 172, 534, 2420
ClaI ATCGAT 1 cut(s) 2374
CseI GACGC 2 cut(s) 667, 1664
Csp6I GTAC 2 cut(s) 2039, 2457
CspAI ACCGGT 1 cut(s) 531
CspCI CAANNNNNGTGG 2 cut(s) 455, 490
CviQI GTAC 2 cut(s) 2039, 2457
DdeI CTNAG 8 cut(s) 222, 987, 1110, 1455, 1830, 1926, 1986, 2547
DpnI GATC 8 cut(s) 584, 1011, 1731, 2166, 2179, 2205, 2373, 2377
DpnII GATC 8 cut(s) 582, 1009, 1729, 2164, 2177, 2203, 2371, 2375
DraIII CACNNNGTG 1 cut(s) 2282
EaeI YGGCCR 2 cut(s) 70, 476
Eam1104I CTCTTC 2 cut(s) 744, 1430
EarI CTCTTC 2 cut(s) 744, 1430
Ecl136II GAGCTC 1 cut(s) 991
Eco130I CCWWGG 5 cut(s) 57, 514, 978, 2190, 2412
Eco147I AGGCCT 1 cut(s) 879
Eco24I GRGCYC 5 cut(s) 223, 766, 993, 1630, 2079
Eco32I GATATC 1 cut(s) 114
Eco47I GGWCC 2 cut(s) 172, 534
Eco53kI GAGCTC 1 cut(s) 991
Eco57I CTGAAG 1 cut(s) 624
Eco81I CCTNAGG 1 cut(s) 1830
Eco88I CYCGRG 2 cut(s) 40, 881
EcoICRI GAGCTC 1 cut(s) 991
EcoRI GAATTC 2 cut(s) 271, 772
EcoRII CCWGG 3 cut(s) 1154, 1237, 1505
EcoRV GATATC 1 cut(s) 114
EcoT14I CCWWGG 5 cut(s) 57, 514, 978, 2190, 2412
EcoT38I GRGCYC 5 cut(s) 223, 766, 993, 1630, 2079
ErhI CCWWGG 5 cut(s) 57, 514, 978, 2190, 2412
FaqI GGGAC 4 cut(s) 34, 395, 520, 1907
FauNDI CATATG 2 cut(s) 933, 1360
FblI GTMKAC 1 cut(s) 2311
Fnu4HI GCNGC 6 cut(s) 209, 1091, 1094, 1468, 1983, 2525
FokI GGATG 7 cut(s) 278, 320, 1352, 1822, 2171, 2381, 2533
FriOI GRGCYC 5 cut(s) 223, 766, 993, 1630, 2079
Fsp4HI GCNGC 6 cut(s) 209, 1091, 1094, 1468, 1983, 2525
FspBI CTAG 3 cut(s) 240, 1791, 2495
FspI TGCGCA 1 cut(s) 662
GlaI GCGC 1 cut(s) 662
GluI GCNGC 6 cut(s) 209, 1091, 1094, 1468, 1983, 2525
GsaI CCCAGC 2 cut(s) 1690, 2478
GsuI CTGGAG 1 cut(s) 1568
HaeIII GGCC 6 cut(s) 63, 72, 478, 879, 1190, 2421
HapII CCGG 3 cut(s) 73, 442, 532
HgaI GACGC 2 cut(s) 667, 1664
HhaI GCGC 1 cut(s) 663
Hin6I GCGC 1 cut(s) 661
HinP1I GCGC 1 cut(s) 661
HincII GTYRAC 1 cut(s) 941
HindII GTYRAC 1 cut(s) 941
HindIII AAGCTT 3 cut(s) 1073, 1970, 2087
HpaII CCGG 3 cut(s) 73, 442, 532
HphI GGTGA 2 cut(s) 334, 347
Hpy166II GTNNAC 5 cut(s) 562, 941, 1501, 2312, 2457
Hpy8I GTNNAC 5 cut(s) 562, 941, 1501, 2312, 2457
Hpy99I CGWCG 1 cut(s) 172
HpyAV CCTTC 3 cut(s) 723, 1485, 2411
HpyCH4IV ACGT 1 cut(s) 2308
HpyF10VI GCNNNNNNNGC 6 cut(s) 69, 903, 983, 1102, 1151, 2438
HpyF3I CTNAG 8 cut(s) 222, 987, 1110, 1455, 1830, 1926, 1986, 2547
HpySE526I ACGT 1 cut(s) 2308
HspAI GCGC 1 cut(s) 661
KpnI GGTACC 1 cut(s) 2042
Kzo9I GATC 8 cut(s) 582, 1009, 1729, 2164, 2177, 2203, 2371, 2375
LmnI GCTCC 6 cut(s) 31, 155, 1087, 1475, 1487, 2437
Lsp1109I GCAGC 6 cut(s) 195, 1080, 1102, 1454, 1994, 2511
LweI GCATC 8 cut(s) 99, 915, 1507, 1519, 1844, 2149, 2511, 2546
MaeI CTAG 3 cut(s) 240, 1791, 2495
MaeII ACGT 1 cut(s) 2308
MaeIII GTNAC 6 cut(s) 179, 645, 1026, 1324, 1619, 2236
MalI GATC 8 cut(s) 584, 1011, 1731, 2166, 2179, 2205, 2373, 2377
MboI GATC 8 cut(s) 582, 1009, 1729, 2164, 2177, 2203, 2371, 2375
MboII GAAGA 9 cut(s) 245, 359, 617, 761, 908, 1447, 1793, 2135, 2396
MfeI CAATTG 1 cut(s) 2427
MflI RGATCY 1 cut(s) 2164
MhlI GDGCHC 6 cut(s) 152, 223, 766, 993, 1630, 2079
MlsI TGGCCA 1 cut(s) 478
MluNI TGGCCA 1 cut(s) 478
MlyI GAGTC 5 cut(s) 56, 967, 1044, 1858, 1939
MmeI TCCRAC 4 cut(s) 9, 117, 230, 310
Mox20I TGGCCA 1 cut(s) 478
MroXI GAANNNNTTC 2 cut(s) 351, 753
MscI TGGCCA 1 cut(s) 478
MslI CAYNNNNRTG 3 cut(s) 194, 360, 932
Msp20I TGGCCA 1 cut(s) 478
MspA1I CMGCKG 4 cut(s) 208, 1093, 1331, 1985
MspCI CTTAAG 2 cut(s) 341, 1274
MspI CCGG 3 cut(s) 73, 442, 532
MspR9I CCNGG 4 cut(s) 74, 1156, 1239, 1507
MunI CAATTG 1 cut(s) 2427
Mva1269I GAATGC 3 cut(s) 87, 843, 2343
MvaI CCWGG 3 cut(s) 1156, 1239, 1507
MvnI CGCG 2 cut(s) 678, 2453
MwoI GCNNNNNNNGC 6 cut(s) 69, 903, 983, 1102, 1151, 2438
NciI CCSGG 1 cut(s) 74
NcoI CCATGG 1 cut(s) 2412
NdeI CATATG 2 cut(s) 933, 1360
NdeII GATC 8 cut(s) 582, 1009, 1729, 2164, 2177, 2203, 2371, 2375
NlaIV GGNNCC 3 cut(s) 536, 2040, 2113
NmeAIII GCCGAG 2 cut(s) 1216, 1972
NmuCI GTSAC 1 cut(s) 179
NsbI TGCGCA 1 cut(s) 662
NspI RCATGY 3 cut(s) 496, 1662, 2392
PaeR7I CTCGAG 1 cut(s) 881
PagI TCATGA 2 cut(s) 93, 2082
PceI AGGCCT 1 cut(s) 879
PciI ACATGT 1 cut(s) 2388
PcsI WCGNNNNNNNCGW 1 cut(s) 143
PctI GAATGC 3 cut(s) 87, 843, 2343
PdmI GAANNNNTTC 2 cut(s) 351, 753
PfeI GAWTC 7 cut(s) 186, 236, 669, 754, 789, 857, 1418
PflMI CCANNNNNTGG 2 cut(s) 1648, 2174
PinAI ACCGGT 1 cut(s) 531
PkrI GCNGC 6 cut(s) 210, 1092, 1095, 1469, 1984, 2526
PleI GAGTC 5 cut(s) 55, 966, 1043, 1857, 1938
PpsI GAGTC 5 cut(s) 55, 966, 1043, 1857, 1938
PscI ACATGT 1 cut(s) 2388
PshBI ATTAAT 1 cut(s) 1218
PsiI TTATAA 1 cut(s) 1593
Psp124BI GAGCTC 1 cut(s) 993
Psp6I CCWGG 3 cut(s) 1154, 1237, 1505
PspFI CCCAGC 2 cut(s) 1686, 2474
PspGI CCWGG 3 cut(s) 1154, 1237, 1505
PspN4I GGNNCC 3 cut(s) 536, 2040, 2113
PspPI GGNCC 4 cut(s) 61, 172, 534, 2420
PspXI VCTCGAGB 1 cut(s) 881
PstI CTGCAG 2 cut(s) 948, 2529
PstNI CAGNNNCTG 1 cut(s) 2058
PsuI RGATCY 1 cut(s) 2164
PvuII CAGCTG 4 cut(s) 208, 1093, 1331, 1985
RsaI GTAC 2 cut(s) 2040, 2458
RsaNI GTAC 2 cut(s) 2039, 2457
RseI CAYNNNNRTG 3 cut(s) 194, 360, 932
SacI GAGCTC 1 cut(s) 993
SatI GCNGC 6 cut(s) 209, 1091, 1094, 1468, 1983, 2525
Sau3AI GATC 8 cut(s) 582, 1009, 1729, 2164, 2177, 2203, 2371, 2375
Sau96I GGNCC 4 cut(s) 61, 172, 534, 2420
SchI GAGTC 5 cut(s) 56, 967, 1044, 1858, 1939
ScrFI CCNGG 4 cut(s) 74, 1156, 1239, 1507
SduI GDGCHC 6 cut(s) 152, 223, 766, 993, 1630, 2079
SfaNI GCATC 8 cut(s) 99, 915, 1507, 1519, 1844, 2149, 2511, 2546
SfcI CTRYAG 4 cut(s) 829, 944, 2525, 2564
SfiI GGCCNNNNNGGCC 1 cut(s) 69
Sfr274I CTCGAG 1 cut(s) 881
SinI GGWCC 2 cut(s) 172, 534
SlaI CTCGAG 1 cut(s) 881
SmiMI CAYNNNNRTG 3 cut(s) 194, 360, 932
SmlI CTYRAG 4 cut(s) 341, 881, 992, 1274
SmoI CTYRAG 4 cut(s) 341, 881, 992, 1274
SseBI AGGCCT 1 cut(s) 879
SsiI CCGC 1 cut(s) 575
SspI AATATT 1 cut(s) 1513
SspMI CTAG 3 cut(s) 240, 1791, 2495
SstI GAGCTC 1 cut(s) 993
StuI AGGCCT 1 cut(s) 879
StyD4I CCNGG 4 cut(s) 72, 1154, 1237, 1505
StyI CCWWGG 5 cut(s) 57, 514, 978, 2190, 2412
TaiI ACGT 1 cut(s) 2311
TaqII GACCGA 2 cut(s) 160, 198
TatI WGTACW 1 cut(s) 2456
TfiI GAWTC 7 cut(s) 186, 236, 669, 754, 789, 857, 1418
TscAI CASTG 2 cut(s) 564, 904
TseFI GTSAC 1 cut(s) 179
TseI GCWGC 6 cut(s) 208, 1090, 1093, 1467, 1982, 2524
Tsp45I GTSAC 1 cut(s) 179
TspRI CASTG 2 cut(s) 564, 904
Van91I CCANNNNNTGG 2 cut(s) 1648, 2174
Vha464I CTTAAG 2 cut(s) 341, 1274
VpaK11BI GGWCC 2 cut(s) 172, 534
VspI ATTAAT 1 cut(s) 1218
XapI RAATTY 6 cut(s) 271, 723, 772, 912, 1348, 1855
XbaI TCTAGA 1 cut(s) 2494
XceI RCATGY 3 cut(s) 496, 1662, 2392
XcmI CCANNNNNNNNNTGG 2 cut(s) 293, 2197
XhoI CTCGAG 1 cut(s) 881
XmiI GTMKAC 1 cut(s) 2311
XmnI GAANNNNTTC 2 cut(s) 351, 753
XspI CTAG 3 cut(s) 240, 1791, 2495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.