Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001003

Physical Location & Seq

Genomic Coordinates Reverse (-)

11478578 .. 11480696

Gene Structure 2119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0129100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGATGATAAATGTGGCAAAACCCAGCTCCCAAATAGTCATGAAAACCCAAACTGCTTCTGCAACTTTAGCAATTGTCTCCTTCCTTCTTCTCCATGCTTCCATGGCAGCTTCAGATCCAATCCAAGACACCTTCCTCCAATGCCTCTCCAATCTTTCCCAATCCCCCTCTCCACCAATCTCATCAGTCACCTATTTCCCCACCAACCCTTCATACACACCAATCTTACATTCCTACATAAGAAACCTTAGATTCACAACCCCTAAAACCCCAAAACCCTCATTCATTGTCACTCCAACCCATGTTTCTCACATCCAAGCCTCAATCCTCTGCTCCAAAATCCATAACCTTCAAGTCAGAATCCGCAGCGGTGGCCATGACTATGATGGCCTCTCTTACATCTCAGATGTTCCATTCATCATTATTGACATGTTCAATCTTCGATCCATAACAGTCAACATAGAAGATGAAAGTGCTTGGGTCGAGTCTGGAGCAACACTAGGTGAAGTTTATTACAGAATAGCTGAGCAGAGCAAAATACATGGCTACCCAGCTGGGGTTTGTCCCACAGTGGGAGTCGGAGGACACTTGAGTGGAGGTGGGTATGGAAATATGATGAGGAAACATGGCTTATCAGTTGATAACATTCTTGATGCTCAAATAGTTGATGTTAATGGAAGGGTTTTGGATAGAGAGTCAATGGGGGAAGACCTCTTTTGGGCTATTAGAGGTGGAGGTGGAGCTAGTTTTGGTGTCATTGTTTCTTGGAAAATCAAATTGGTTCAAGTCCCAGAAGTTGTCACAGTTTTTAGAGTTGAGAGGACTTTGGAGCAAGGCGCCACCGACATTGTTCATCAATGGCAGTATGTAGGGGATACAATAGATGATGATCTTTTCATTAGGGTGGTTGTGATGCCAGTCAATAGAAAAACTCAGACAGTGAAAGCTAAATTTGTTGCTTTGTATTTAGGAATTGCAGAAAAGCTTGAAGCTTTGATGGGTGAGAGGTTTCCCCAATTGGGTTTGAAGCATGAGGACTATGTCGAAATGGGTTGGATTGAATCGGTTCTGTATTGGTCTAATTACCCAATTGGAACTTCTGCAGATATACTGCTTGAAAGAATACCTCAGTCAGAAAAGTTCTTGAAGAAGAAATCTGACTACATCCAAGAACCAATGTCAAAGGTTGGTCTTGAAGGACTGTGGAACAAGATGATGGAGCTGAAAAAGCCAGTACTAACATTCAATCCTTATGGTGGGAAAATGAGCGAAATTCCGGAGCTTGACACCCCATTCCCACATAGAGCAGGAAATGTGTACAAAATTCAGTACTCGGTGAATTGGAAAGAGGAAGGTGTAGAGGCTGAAGATAAACATCTTGATCTGATAAGAAGGCTTTACGAGCATATGACACCTTATGTGTCAAAGTCACCAAGGTGTTCATATCTAAATTACAGAGATGTTGATTTGGGGACTAATGGAAATGGCAATGTGAGCTACTCAGAAGCTAGTGTTTGGGGGACCAAGTACTTCAAGGGAAACTTTGAGAGGTTGGTACAAGTGAAGACTGCTGTTGATCCAGGAAACTTTTTCAGGTATGAACAAAGTATCCCACCTCTTACGGCTTGGAATGGTAAAATGGCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006325 GO:0006338 GO:0006351 GO:0006354 GO:0006355 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019899 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0040029 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045815 GO:0045893 GO:0045935 GO:0046483 GO:0048096 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Elf1

Protein Analysis

549

Amino Acids

61.56

Weight (kDa)

6.42

Isoelectric Point (pI)

34.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	93 - 229	4.7e-23	FAD binding domain
BBE	PF08031	481 - 538	1.9e-20	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001003)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46030 AT5G46030 AT5G46030
fragaria_vesca	FvH4_3g08380 FvH4_3g08380 FvH4_3g08380 FvH4_3g08380 FvH4_3g08380 FvH4_3g08380 FvH4_3g19110 FvH4_3g43700
malus_domestica	MD03G1236500.v1.1 MD05G1271300.v1.1 MD05G1308200.v1.1 MD06G1020300.v1.1 MD10G1287200.v1.1 MD11G1257300.v1.1
prunus_persica	Prupe.2G137500_v2.0.a1 Prupe.2G137800_v2.0.a1 Prupe.2G141500_v2.0.a1 Prupe.2G141600_v2.0.a1 Prupe.4G054600_v2.0.a1 Prupe.4G172800_v2.0.a1 Prupe.4G172800_v2.0.a1 Prupe.4G172800_v2.0.a1
pyrus_communis	pycom05g28490
rosa_chinensis	RchiOBHm_Chr4g0445711 RchiOBHm_Chr5g0009521 RchiOBHm_Chr5g0031911 RchiOBHm_Chr5g0078351
rosa_laevigata	RLG00000036769
rosa_multiflora	Rmu_sc0000335.1_g000042 Rmu_sc0001124.1_g000026 Rmu_sc0002711.1_g000002 Rmu_sc0005375.1_g000025
rosa_roxburghii	Rroxscaffold_1G00048350 Rroxscaffold_1G00066610 Rroxscaffold_1G00067310 Rroxscaffold_5G00386200
rosa_rugosa	Rorug04G0365100 Rorug04G0444100 Rorug05G0129100 Rorug05G0460300
rosa_samantha	Rh4AG426000 Rh4CG453000 Rh4DG434200 Rh5AG074900 Rh5AG075500 Rh5AG223100 Rh5AG514200 Rh5BG070700 Rh5BG223200 Rh5BG537100 Rh5CG083400 Rh5CG246400 Rh5CG560600 Rh5DG071100 Rh5DG228100
rosa_wichuraiana	Rw5G006940 Rw5G006960 Rw5G020320 Rw5G047740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	836
AccIII	TCCGGA	1 cut(s)	1276
AciI	CCGC	2 cut(s)	364, 369
AclWI	GGATC	3 cut(s)	110, 438, 1571
AcoI	YGGCCR	1 cut(s)	373
AcsI	RAATTY	3 cut(s)	950, 1272, 1323
AcuI	CTGAAG	2 cut(s)	96, 1386
AcyI	GRCGYC	1 cut(s)	837
AdeI	CACNNNGTG	1 cut(s)	503
AfaI	GTAC	5 cut(s)	1236, 1319, 1331, 1529, 1557
AfiI	CCNNNNNNNGG	5 cut(s)	556, 572, 718, 1019, 1256
AflIII	ACRYGT	1 cut(s)	429
AjnI	CCWGG	1 cut(s)	1579
AjuI	GAANNNNNNNTTGG	8 cut(s)	214, 246, 289, 321, 761, 793, 1081, 1113
AleI	CACNNNNGTG	2 cut(s)	591, 1435
AloI	GAACNNNNNNTCC	2 cut(s)	1593, 1625
Alw26I	GTCTC	1 cut(s)	82
AlwI	GGATC	3 cut(s)	110, 438, 1571
Aor13HI	TCCGGA	1 cut(s)	1276
AoxI	GGCC	2 cut(s)	373, 388
ApeKI	GCWGC	2 cut(s)	107, 366
ApoI	RAATTY	3 cut(s)	950, 1272, 1323
Asp700I	GAANNNNTTC	1 cut(s)	1065
AspLEI	GCGC	1 cut(s)	839
AspS9I	GGNCC	1 cut(s)	1521
AsuHPI	GGTGA	5 cut(s)	181, 515, 1013, 1348, 1422
AvaII	GGWCC	1 cut(s)	1521
BalI	TGGCCA	1 cut(s)	375
BanI	GGYRCC	1 cut(s)	836
BbsI	GAAGAC	2 cut(s)	714, 1571
BbvI	GCAGC	2 cut(s)	119, 378
BccI	CCATC	3 cut(s)	380, 991, 1210
BceAI	ACGGC	1 cut(s)	1638
BciT130I	CCWGG	1 cut(s)	1581
BciVI	GTATCC	2 cut(s)	868, 1619
BcoDI	GTCTC	1 cut(s)	82
BfaI	CTAG	3 cut(s)	500, 744, 1509
BfmI	CTRYAG	1 cut(s)	1101
BfoI	RGCGCY	1 cut(s)	840
BfuI	GTATCC	2 cut(s)	868, 1619
BisI	GCNGC	2 cut(s)	108, 367
BlpI	GCTNAGC	1 cut(s)	525
BlsI	GCNGC	2 cut(s)	109, 368
BmcAI	AGTACT	3 cut(s)	1236, 1331, 1529
Bme1390I	CCNGG	1 cut(s)	1581
Bme18I	GGWCC	1 cut(s)	1521
BmgT120I	GGNCC	1 cut(s)	1521
BmiI	GGNNCC	2 cut(s)	838, 1522
BmrFI	CCNGG	1 cut(s)	1581
BmsI	GCATC	2 cut(s)	643, 903
BpiI	GAAGAC	2 cut(s)	714, 1571
BpmI	CTGGAG	1 cut(s)	510
Bpu1102I	GCTNAGC	1 cut(s)	525
BpuEI	CTTGAG	1 cut(s)	610
BsaBI	GATNNNNATC	2 cut(s)	888, 1374
BsaHI	GRCGYC	1 cut(s)	837
BsaJI	CCNNGG	2 cut(s)	102, 1433
BsaWI	WCCGGW	1 cut(s)	1276
Bsc4I	CCNNNNNNNGG	5 cut(s)	556, 572, 718, 1019, 1256
Bse1I	ACTGG	2 cut(s)	917, 1232
Bse3DI	GCAATG	1 cut(s)	1495
Bse8I	GATNNNNATC	2 cut(s)	888, 1374
BseAI	TCCGGA	1 cut(s)	1276
BseBI	CCWGG	1 cut(s)	1581
BseDI	CCNNGG	2 cut(s)	102, 1433
BseGI	GGATG	2 cut(s)	312, 1164
BseJI	GATNNNNATC	2 cut(s)	888, 1374
BseLI	CCNNNNNNNGG	5 cut(s)	556, 572, 718, 1019, 1256
BseMI	GCAATG	1 cut(s)	1495
BseMII	CTCAG	5 cut(s)	417, 516, 947, 1142, 1515
BseNI	ACTGG	2 cut(s)	917, 1232
BseXI	GCAGC	2 cut(s)	119, 378
BseYI	CCCAGC	3 cut(s)	23, 550, 554
BshFI	GGCC	2 cut(s)	375, 390
BshNI	GGYRCC	1 cut(s)	836
BsiSI	CCGG	1 cut(s)	1277
BslFI	GGGAC	4 cut(s)	549, 773, 1486, 1534
BslI	CCNNNNNNNGG	5 cut(s)	556, 572, 718, 1019, 1256
BsmAI	GTCTC	1 cut(s)	82
BsmFI	GGGAC	4 cut(s)	549, 773, 1486, 1534
BsnI	GGCC	2 cut(s)	375, 390
Bsp13I	TCCGGA	1 cut(s)	1276
Bsp1407I	TGTACA	1 cut(s)	1317
Bsp143I	GATC	5 cut(s)	115, 443, 889, 1381, 1576
Bsp1720I	GCTNAGC	1 cut(s)	525
Bsp19I	CCATGG	1 cut(s)	102
BspACI	CCGC	2 cut(s)	364, 369
BspANI	GGCC	2 cut(s)	375, 390
BspCNI	CTCAG	5 cut(s)	416, 517, 946, 1141, 1514
BspEI	TCCGGA	1 cut(s)	1276
BspHI	TCATGA	1 cut(s)	39
BspLI	GGNNCC	2 cut(s)	838, 1522
BspMAI	CTGCAG	1 cut(s)	1105
BspPI	GGATC	3 cut(s)	110, 438, 1571
BspT107I	GGYRCC	1 cut(s)	836
BsrDI	GCAATG	1 cut(s)	1495
BsrGI	TGTACA	1 cut(s)	1317
BsrI	ACTGG	2 cut(s)	917, 1232
BssECI	CCNNGG	2 cut(s)	102, 1433
BssMI	GATC	5 cut(s)	115, 443, 889, 1381, 1576
BssNI	GRCGYC	1 cut(s)	837
BssT1I	CCWWGG	2 cut(s)	102, 1433
Bst2UI	CCWGG	1 cut(s)	1581
Bst4CI	ACNGT	5 cut(s)	454, 571, 805, 940, 1203
BstACI	GRCGYC	1 cut(s)	837
BstAUI	TGTACA	1 cut(s)	1317
BstDEI	CTNAG	6 cut(s)	248, 403, 525, 933, 1128, 1501
BstDSI	CCRYGG	1 cut(s)	102
BstF5I	GGATG	2 cut(s)	312, 1164
BstH2I	RGCGCY	1 cut(s)	840
BstHHI	GCGC	1 cut(s)	839
BstKTI	GATC	5 cut(s)	118, 446, 892, 1384, 1579
BstMAI	GTCTC	1 cut(s)	82
BstMBI	GATC	5 cut(s)	115, 443, 889, 1381, 1576
BstMWI	GCNNNNNNNGC	6 cut(s)	68, 104, 372, 1228, 1402, 1494
BstNI	CCWGG	1 cut(s)	1581
BstNSI	RCATGY	1 cut(s)	433
BstSCI	CCNGG	1 cut(s)	1579
BstSFI	CTRYAG	1 cut(s)	1101
BstV1I	GCAGC	2 cut(s)	119, 378
BstV2I	GAAGAC	2 cut(s)	714, 1571
BstX2I	RGATCY	1 cut(s)	115
BstYI	RGATCY	1 cut(s)	115
BsuI	GTATCC	2 cut(s)	868, 1619
BsuRI	GGCC	2 cut(s)	375, 390
BtgI	CCRYGG	1 cut(s)	102
BtsCI	GGATG	2 cut(s)	312, 1164
BtsIMutI	CAGTG	2 cut(s)	576, 945
CciI	TCATGA	1 cut(s)	39
CfoI	GCGC	1 cut(s)	839
Cfr13I	GGNCC	1 cut(s)	1521
Csp6I	GTAC	5 cut(s)	1235, 1318, 1330, 1528, 1556
CspCI	CAANNNNNGTGG	2 cut(s)	829, 864
CviAII	CATG	9 cut(s)	40, 95, 103, 302, 377, 430, 542, 626, 1031
CviQI	GTAC	5 cut(s)	1235, 1318, 1330, 1528, 1556
DdeI	CTNAG	6 cut(s)	248, 403, 525, 933, 1128, 1501
DinI	GGCGCC	1 cut(s)	838
DpnI	GATC	5 cut(s)	117, 445, 891, 1383, 1578
DpnII	GATC	5 cut(s)	115, 443, 889, 1381, 1576
DraIII	CACNNNGTG	1 cut(s)	503
EaeI	YGGCCR	1 cut(s)	373
Eco130I	CCWWGG	2 cut(s)	102, 1433
Eco47I	GGWCC	1 cut(s)	1521
Eco57I	CTGAAG	2 cut(s)	96, 1386
EcoRII	CCWGG	1 cut(s)	1579
EcoT14I	CCWWGG	2 cut(s)	102, 1433
EgeI	GGCGCC	1 cut(s)	838
EheI	GGCGCC	1 cut(s)	838
ErhI	CCWWGG	2 cut(s)	102, 1433
FaeI	CATG	9 cut(s)	43, 98, 106, 305, 380, 433, 545, 629, 1034
FalI	AAGNNNNNCTT	2 cut(s)	1526, 1558
FaqI	GGGAC	4 cut(s)	549, 773, 1486, 1534
FatI	CATG	9 cut(s)	39, 94, 102, 301, 376, 429, 541, 625, 1030
FauNDI	CATATG	1 cut(s)	1407
Fnu4HI	GCNGC	2 cut(s)	108, 367
FokI	GGATG	2 cut(s)	299, 1151
Fsp4HI	GCNGC	2 cut(s)	108, 367
FspBI	CTAG	3 cut(s)	500, 744, 1509
GlaI	GCGC	1 cut(s)	838
GluI	GCNGC	2 cut(s)	108, 367
GsaI	CCCAGC	3 cut(s)	27, 554, 558
GsuI	CTGGAG	1 cut(s)	510
HaeII	RGCGCY	1 cut(s)	840
HaeIII	GGCC	2 cut(s)	375, 390
HapII	CCGG	1 cut(s)	1277
HhaI	GCGC	1 cut(s)	839
Hin1I	GRCGYC	1 cut(s)	837
Hin1II	CATG	9 cut(s)	43, 98, 106, 305, 380, 433, 545, 629, 1034
Hin6I	GCGC	1 cut(s)	837
HinP1I	GCGC	1 cut(s)	837
HincII	GTYRAC	1 cut(s)	457
HindII	GTYRAC	1 cut(s)	457
HindIII	AAGCTT	2 cut(s)	983, 990
HinfI	GANTC	6 cut(s)	252, 360, 485, 576, 695, 1061
HpaII	CCGG	1 cut(s)	1277
HphI	GGTGA	5 cut(s)	181, 515, 1013, 1348, 1422
Hpy166II	GTNNAC	2 cut(s)	457, 1318
Hpy188I	TCNGA	9 cut(s)	115, 359, 406, 581, 936, 1135, 1159, 1386, 1504
Hpy188III	TCNNGA	7 cut(s)	40, 489, 650, 1144, 1193, 1277, 1379
Hpy8I	GTNNAC	2 cut(s)	457, 1318
HpyAV	CCTTC	9 cut(s)	91, 95, 142, 219, 359, 672, 1190, 1346, 1386
HpyCH4III	ACNGT	5 cut(s)	454, 571, 805, 940, 1203
HpyCH4V	TGCA	3 cut(s)	62, 977, 1103
HpyF10VI	GCNNNNNNNGC	6 cut(s)	68, 104, 372, 1228, 1402, 1494
HpyF3I	CTNAG	6 cut(s)	248, 403, 525, 933, 1128, 1501
Hsp92I	GRCGYC	1 cut(s)	837
Hsp92II	CATG	9 cut(s)	43, 98, 106, 305, 380, 433, 545, 629, 1034
HspAI	GCGC	1 cut(s)	837
KasI	GGCGCC	1 cut(s)	836
Kpn2I	TCCGGA	1 cut(s)	1276
Kzo9I	GATC	5 cut(s)	115, 443, 889, 1381, 1576
LmnI	GCTCC	7 cut(s)	32, 338, 491, 740, 829, 1219, 1279
Lsp1109I	GCAGC	2 cut(s)	119, 378
LweI	GCATC	2 cut(s)	643, 903
MaeI	CTAG	3 cut(s)	500, 744, 1509
MaeIII	GTNAC	4 cut(s)	187, 289, 799, 1428
MalI	GATC	5 cut(s)	117, 445, 891, 1383, 1578
MboI	GATC	5 cut(s)	115, 443, 889, 1381, 1576
MboII	GAAGA	8 cut(s)	80, 431, 476, 719, 1159, 1162, 1379, 1576
MfeI	CAATTG	3 cut(s)	72, 1016, 1089
MflI	RGATCY	1 cut(s)	115
MlsI	TGGCCA	1 cut(s)	375
MluNI	TGGCCA	1 cut(s)	375
Mly113I	GGCGCC	1 cut(s)	837
MlyI	GAGTC	3 cut(s)	494, 585, 704
MmeI	TCCRAC	3 cut(s)	320, 559, 1034
Mox20I	TGGCCA	1 cut(s)	375
MroI	TCCGGA	1 cut(s)	1276
MroXI	GAANNNNTTC	1 cut(s)	1065
MscI	TGGCCA	1 cut(s)	375
MseI	TTAA	1 cut(s)	672
MslI	CAYNNNNRTG	4 cut(s)	381, 591, 902, 1435
Msp20I	TGGCCA	1 cut(s)	375
MspA1I	CMGCKG	2 cut(s)	369, 554
MspI	CCGG	1 cut(s)	1277
MspR9I	CCNGG	1 cut(s)	1581
MunI	CAATTG	3 cut(s)	72, 1016, 1089
MvaI	CCWGG	1 cut(s)	1581
MwoI	GCNNNNNNNGC	6 cut(s)	68, 104, 372, 1228, 1402, 1494
NarI	GGCGCC	1 cut(s)	837
NcoI	CCATGG	1 cut(s)	102
NdeI	CATATG	1 cut(s)	1407
NdeII	GATC	5 cut(s)	115, 443, 889, 1381, 1576
NlaIII	CATG	9 cut(s)	43, 98, 106, 305, 380, 433, 545, 629, 1034
NlaIV	GGNNCC	2 cut(s)	838, 1522
NmuCI	GTSAC	4 cut(s)	187, 289, 799, 1428
NspI	RCATGY	1 cut(s)	433
OliI	CACNNNNGTG	2 cut(s)	591, 1435
PagI	TCATGA	1 cut(s)	39
PciI	ACATGT	1 cut(s)	429
PdmI	GAANNNNTTC	1 cut(s)	1065
PfeI	GAWTC	3 cut(s)	252, 360, 1061
PflFI	GACNNNGTC	1 cut(s)	1040
PfoI	TCCNGGA	1 cut(s)	1579
PkrI	GCNGC	2 cut(s)	109, 368
PleI	GAGTC	3 cut(s)	493, 584, 703
PluTI	GGCGCC	1 cut(s)	840
PpsI	GAGTC	3 cut(s)	493, 584, 703
PscI	ACATGT	1 cut(s)	429
Psp6I	CCWGG	1 cut(s)	1579
PspFI	CCCAGC	3 cut(s)	23, 550, 554
PspGI	CCWGG	1 cut(s)	1579
PspN4I	GGNNCC	2 cut(s)	838, 1522
PspPI	GGNCC	1 cut(s)	1521
PstI	CTGCAG	1 cut(s)	1105
PsuI	RGATCY	1 cut(s)	115
PsyI	GACNNNGTC	1 cut(s)	1040
PvuII	CAGCTG	1 cut(s)	554
RsaI	GTAC	5 cut(s)	1236, 1319, 1331, 1529, 1557
RsaNI	GTAC	5 cut(s)	1235, 1318, 1330, 1528, 1556
RseI	CAYNNNNRTG	4 cut(s)	381, 591, 902, 1435
SaqAI	TTAA	1 cut(s)	672
SatI	GCNGC	2 cut(s)	108, 367
Sau3AI	GATC	5 cut(s)	115, 443, 889, 1381, 1576
Sau96I	GGNCC	1 cut(s)	1521
ScaI	AGTACT	3 cut(s)	1236, 1331, 1529
SchI	GAGTC	3 cut(s)	494, 585, 704
ScrFI	CCNGG	1 cut(s)	1581
SfaNI	GCATC	2 cut(s)	643, 903
SfcI	CTRYAG	1 cut(s)	1101
SfoI	GGCGCC	1 cut(s)	838
SinI	GGWCC	1 cut(s)	1521
SmiMI	CAYNNNNRTG	4 cut(s)	381, 591, 902, 1435
SmlI	CTYRAG	1 cut(s)	589
SmoI	CTYRAG	1 cut(s)	589
SsiI	CCGC	2 cut(s)	364, 369
SspDI	GGCGCC	1 cut(s)	836
SspMI	CTAG	3 cut(s)	500, 744, 1509
StyD4I	CCNGG	1 cut(s)	1579
StyI	CCWWGG	2 cut(s)	102, 1433
TaaI	ACNGT	5 cut(s)	454, 571, 805, 940, 1203
TaqI	TCGA	3 cut(s)	442, 483, 1044
TatI	WGTACW	4 cut(s)	1234, 1317, 1329, 1527
TfiI	GAWTC	3 cut(s)	252, 360, 1061
Tru1I	TTAA	1 cut(s)	672
Tru9I	TTAA	1 cut(s)	672
TscAI	CASTG	2 cut(s)	576, 945
TseFI	GTSAC	4 cut(s)	187, 289, 799, 1428
TseI	GCWGC	2 cut(s)	107, 366
Tsp45I	GTSAC	4 cut(s)	187, 289, 799, 1428
TspDTI	ATGAA	9 cut(s)	56, 201, 274, 406, 483, 842, 886, 1431, 1614
TspRI	CASTG	2 cut(s)	576, 945
Tth111I	GACNNNGTC	1 cut(s)	1040
VpaK11BI	GGWCC	1 cut(s)	1521
XapI	RAATTY	3 cut(s)	950, 1272, 1323
XceI	RCATGY	1 cut(s)	433
XcmI	CCANNNNNNNNNTGG	1 cut(s)	383
XmnI	GAANNNNTTC	1 cut(s)	1065
XspI	CTAG	3 cut(s)	500, 744, 1509
ZrmI	AGTACT	3 cut(s)	1236, 1331, 1529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.