Rorug05G0167400

DDRGK domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0008682
Physical Location & Seq
Reverse (-)
15549668 .. 15553019
3352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0167400.1

Sequence Viewer

Length: 3066 bp
ATGGATAGCTTCTGTGCAAACCTATTCAAGCCTACCAGCTATCGCTTCCTCATCAACAATGTTGCTCACTACTTGCTCTTTCTTTTTCTGGCATCTACATATCTGCAAACTACTAAACAGTGTTTGGGAGATGGACTTCTGAGTGGTGTGAGATCATCATCATGCATCGAGGAAGAGAGACGAGCGCTTCTCACCTTCAAAGGAGATGTTACTGATCCTTCCGGTAGGCTTTCTTCTTGGGTGGGTCAGGATTGCTGCCGATGGAAAGGGATTTCGTGCAACAACCGTACAGGTCATGTTGCAAGGATGGACCTCCGAAACCTGAATTCTGATCACGGCTTCTACGGGGAGACCTCTTTGGGGGGTAAGATTAATCCTTCTTTGCTTATCTTTAAGAACTTACGTTACCTTGATCTAAGCGGAAACGATTTTCAAGGACGTCGAATTCCTAACTTCTTTGGGAAGCTTCAAAGTTTGAGGTATCTCAATCTCTCATATAGTTCATTTGTGGGAGAGATTCCCCCAGCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTTAGTTGCGATCATTATTCGGTTTTTGATCCTTATTATTCCAGAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAGTACCTCAATCTTGGAGGTGTGGACCTTAGCAGCACAGGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCAGGTTGCCAAATTCAAAACCTTCCACACTCCCAGCTTCCGTCAGTGAACTTCACATCCCGCCTATTGGTTCTTGATATATCAGAGAATCATATTAATTCTTCATTTCCCAGCTGGTTTTTTAATCTTACCAACCTCAAAAGACTTGAAGCACATTCCAATTTGTTCGGGCCCTTCCCTGTTGAATTTGCAAACCTCAAGTCTTTGGAAGACCTTGATTTAAGCAGTTCTACTTTTCTCCAAGGTCAAATTCCCAAAGTCTTTGGTACTTTGTGCAGCCTAAGAATATTAGATCTTTCAAAGAGCGAGCTCAATGGTAGTTTGGAAGAGGTTTTGAATGGTTTCTCAAACTGTACAAGCCGTAGATTAGAGTCACTTGATTTGTCCGGCAATATGGTGGAAGGTGAACTGCCTGCCGCCTTAGGAATGCTAGAAAATCTGAAGGAACTTGACCTCAGTGACAACCAATTTTCTGGTTCAATTCCACAATCTATTGGTAATTTATCATCATTGGAAAAACTGGACATCTCTGTTAATAATTTGAATGGGTCCATTCCTGAAAGTTTGGGACAACTCTCTCAGCTAGTTCACCTCGATCTATCTGCTAATTCGTTGGAAGGCAATCTAAATGAAGCCCATTTCCGAACTCTCACAGAGTTGGAGTATTTTGCAGTCTGTAGCAAATACGGGCTCATGACTGGGTCCCTCATTTTTAACATGGCTCATGACTGGATTCCTCCTTTCCAACTTAATTCAGTCGACATTTCCGACTGCAGAGTAGGCCCTGCCTTTGGGGCATGGCTCAAGTCTCAAACTGAATTAACGGAAGTCACGCTTAGTAATACTTCAATCTCAGATTTCATACCAGAGGAATGGTTCTTGAAGATATCTTTCCAGCTCACATGGTTGGATTTATCTAACAACCAAATTCATGGAAAGCTTCCATTTCACATAGACTTCCGGTCCCCGTCCTTGGAGAGAATAGATTTGACTCATAATCAATTTGAGGGCCCTCTCCCACATTGGTCTAGTGATGTTGCCCAGCATCTCTTTCTTGGAAGCAATTTATTTTCCGGGCCGATTCCCTCAAATTTTGATCAATTACTGCCTAACTTGGTACAATTAGATCTATCTTACAATCATCTGAATGGTAGTATACCACCCTCTGTGTGGAACCTGTCAGATTTGTCATTTCTTATGTTAAGAAGCAATCGCTTGACTGGAGAATTTCCTCTAGGATGGAGTCTGGCGCCAAAAATAGAAGTTGTAGATGTCTCAGACAACAATTTGTCTGGCAATTTCTCCAGTTCAATGAGTGTTCCAAGCTTACTAGAAGTATTGGATCTGAGCAAAAACAATTTCGGGGGTCAAATTCCTTCTTCTCTATTCCAAAACTGCAGCTGGCTGCTGAGTATTGATCTTGGAGGCAATAGATTTACTGGAAGCATACCTTTACAGACAAGTTCAAATGTACCAGATGAATTGCATATGCTAAGATTGCGATCCAACTCTTTAAGCGGACATATCCCCAATCGATTGTGCTCTCTTCAATCTCTTCACATCATAGACCTTGCCCACAACAAATTTTCAGGGACCATTCCCAAGTGTTTGTATGATCTGACTGCTTTGGTCGATGGTAGTTACGTTCCTATGTCCGAAATAGCAGAATATTATGAGACGGCCAGCTTGACATTGAAGGGAAAAGAACTCGAATATGAAAGGACTCTGGATTTGGTGATTATCATTGATTTCTCATCAAACAACTTAGAAGGTGAAATCCCTGACGAAGTAAGCAGCCTCAAAGCCTTGGGGACATTGAACTTGTCAAGAAATCAACTAACTGGAAACATTCCCTCAAAGATTGGAAACTTGACGCAGCTGGAAACTCTTGATCTCTCACACAATCACCTCTCTGGGCAGATTCCCCAAAGTCTTTCTTCATTAAACTTTTTGGCTCACTTGAACTTGTCTTTCAACAACTTGTCCGGAAGAATTCCTTCAGGCAACCAACTTCAAACACTCAATGATTTATCCATTTACGAAGGCAATCCATCCTTGTGTGGGGTCCCTCTTTCAACTGTCTGCCCGGGAGATGGCGCAGCTGACCCTGACGATGGTGATCATAATGATGATGATAATGATGAGAATGGGAAGTTTGGTATCGTTGTTAGCGCTGTCCTCGGCTTCATCATAGGCTTCTGGAGTGTCTGTGGCACATTGGTTATGAAGAAATCATGGAGGTATGCCTATTTTCGATTCTTTGATAACATAAAGGAGAGGGCAGCATTAGCAATTGCATTGAGAGTGGCTCGTTGGCAAAGGAGGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDRGK

Protein Analysis

1021

Amino Acids

113.28

Weight (kDa)

5.17

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 57 - 94 2.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 123 - 190 1.1e-07 Leucine-rich repeat region
LRR_14 PF23598 205 - 357 6.2e-10 Leucine-rich repeat region
LRR_8 PF13855 266 - 321 3.2e-06 Leucine rich repeat
LRR_8 PF13855 366 - 426 2.8e-07 Leucine rich repeat
LRR_14 PF23598 367 - 521 1.5e-12 Leucine-rich repeat region
LRR_8 PF13855 391 - 450 1.1e-08 Leucine rich repeat
LRR_14 PF23598 837 - 924 6.9e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 442
AccB1I GGYRCC 1 cut(s) 1984
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 2 cut(s) 1494, 1891
AccIII TCCGGA 1 cut(s) 2720
AciI CCGC 4 cut(s) 420, 796, 1152, 2253
AclWI GGATC 4 cut(s) 209, 584, 2085, 2232
AcoI YGGCCR 1 cut(s) 2415
AcuI CTGAAG 2 cut(s) 1196, 2718
AcyI GRCGYC 2 cut(s) 439, 1985
AfaI GTAC 6 cut(s) 289, 644, 1003, 1090, 1854, 2208
AfeI AGCGCT 2 cut(s) 186, 2908
AfiI CCNNNNNNNGG 9 cut(s) 360, 530, 802, 1526, 1708, 1905, 2796, 2828, 2849
AhdI GACNNNNNGTC 1 cut(s) 1696
AjuI GAANNNNNNNTTGG 4 cut(s) 598, 630, 969, 1001
AloI GAACNNNNNNTCC 2 cut(s) 776, 808
Alw21I GWGCWC 2 cut(s) 1047, 2279
Alw26I GTCTC 5 cut(s) 172, 344, 1548, 2014, 2405
AlwI GGATC 4 cut(s) 209, 584, 2085, 2232
Ama87I CYCGRG 1 cut(s) 2821
Aor13HI TCCGGA 1 cut(s) 2720
Aor51HI AGCGCT 2 cut(s) 186, 2908
AoxI GGCC 5 cut(s) 905, 1516, 1744, 1811, 2415
ApaI GGGCCC 2 cut(s) 909, 1748
ApeKI GCWGC 9 cut(s) 255, 672, 1011, 2133, 2140, 2529, 2611, 2834, 3017
ArsI GACNNNNNNTTYG 4 cut(s) 920, 952, 2449, 2481
AseI ATTAAT 2 cut(s) 372, 831
Asp700I GAANNNNTTC 2 cut(s) 1076, 2731
AspLEI GCGC 4 cut(s) 187, 1987, 2834, 2909
AsuC2I CCSGG 3 cut(s) 1810, 2822, 2823
AsuHPI GGTGA 7 cut(s) 184, 1151, 1316, 2482, 2519, 2633, 2864
AvaI CYCGRG 1 cut(s) 2821
AvaII GGWCC 7 cut(s) 310, 664, 1284, 1437, 1698, 2328, 2800
AxyI CCTNAGG 1 cut(s) 1156
BaeGI GKGCMC 2 cut(s) 909, 1748
BanI GGYRCC 1 cut(s) 1984
BanII GRGCYC 4 cut(s) 909, 1047, 1428, 1748
BarI GAAGNNNNNNTAC 2 cut(s) 217, 249
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 2 cut(s) 1047, 2279
BbvI GCAGC 9 cut(s) 242, 684, 1023, 2127, 2145, 2541, 2623, 2846, 3029
BccI CCATC 8 cut(s) 125, 255, 301, 1968, 2363, 2794, 2822, 2843
BceAI ACGGC 3 cut(s) 352, 1080, 2430
BcgI CGANNNNNNTGC 2 cut(s) 1319, 1353
BclI TGATCA 3 cut(s) 331, 1831, 2854
BcnI CCSGG 3 cut(s) 1810, 2822, 2823
BcoDI GTCTC 5 cut(s) 172, 344, 1548, 2014, 2405
BfaI CTAG 5 cut(s) 1166, 1319, 1764, 1970, 2066
BfmI CTRYAG 3 cut(s) 1411, 1507, 2131
BfoI RGCGCY 3 cut(s) 188, 1988, 2910
BglI GCCNNNNNGGC 1 cut(s) 1529
BglII AGATCT 2 cut(s) 1027, 1861
Bme1390I CCNGG 3 cut(s) 1810, 2822, 2823
Bme18I GGWCC 7 cut(s) 310, 664, 1284, 1437, 1698, 2328, 2800
BmeRI GACNNNNNGTC 1 cut(s) 1696
BmeT110I CYCGRG 1 cut(s) 2821
BmrFI CCNGG 3 cut(s) 1810, 2822, 2823
BmrI ACTGGG 1 cut(s) 1443
BmsI GCATC 3 cut(s) 101, 174, 1789
BmuI ACTGGG 1 cut(s) 1443
BpiI GAAGAC 1 cut(s) 951
BplI GAGNNNNNCTC 4 cut(s) 174, 206, 3028, 3060
BpmI CTGGAG 3 cut(s) 1977, 2023, 2956
Bpu10I CCTNAGC 1 cut(s) 668
BpuEI CTTGAG 2 cut(s) 917, 1523
BpuMI CCSGG 3 cut(s) 1810, 2822, 2823
Bsa29I ATCGAT 1 cut(s) 2269
BsaBI GATNNNNATC 3 cut(s) 157, 2236, 2853
BsaHI GRCGYC 2 cut(s) 439, 1985
BsaI GGTCTC 1 cut(s) 344
BsaJI CCNNGG 5 cut(s) 976, 1707, 2541, 2821, 2914
BsaWI WCCGGW 3 cut(s) 221, 1695, 2720
BsaXI ACNNNNNCTCC 2 cut(s) 2929, 2959
Bsc4I CCNNNNNNNGG 9 cut(s) 360, 530, 802, 1526, 1708, 1905, 2796, 2828, 2849
Bse1I ACTGG 7 cut(s) 1260, 1438, 1469, 1960, 2040, 2179, 2581
Bse21I CCTNAGG 1 cut(s) 1156
Bse8I GATNNNNATC 3 cut(s) 157, 2236, 2853
BseAI TCCGGA 1 cut(s) 2720
BseCI ATCGAT 1 cut(s) 2269
BseDI CCNNGG 5 cut(s) 976, 1707, 2541, 2821, 2914
BseGI GGATG 4 cut(s) 312, 791, 1979, 2786
BseJI GATNNNNATC 3 cut(s) 157, 2236, 2853
BseLI CCNNNNNNNGG 9 cut(s) 360, 530, 802, 1526, 1708, 1905, 2796, 2828, 2849
BseMII CTCAG 7 cut(s) 131, 1204, 1328, 1602, 2025, 2072, 2135
BseNI ACTGG 7 cut(s) 1260, 1438, 1469, 1960, 2040, 2179, 2581
BseSI GKGCMC 2 cut(s) 909, 1748
BseXI GCAGC 9 cut(s) 242, 684, 1023, 2127, 2145, 2541, 2623, 2846, 3029
BseYI CCCAGC 4 cut(s) 523, 768, 845, 1776
BsgI GTGCAG 1 cut(s) 1030
BshFI GGCC 5 cut(s) 907, 1518, 1746, 1813, 2417
BshNI GGYRCC 1 cut(s) 1984
BshVI ATCGAT 1 cut(s) 2269
BsiHKAI GWGCWC 2 cut(s) 1047, 2279
BsiHKCI CYCGRG 1 cut(s) 2821
BsiSI CCGG 6 cut(s) 222, 1122, 1696, 1809, 2721, 2822
BslFI GGGAC 6 cut(s) 1317, 1423, 1684, 2341, 2560, 2786
BslI CCNNNNNNNGG 9 cut(s) 360, 530, 802, 1526, 1708, 1905, 2796, 2828, 2849
BsmAI GTCTC 5 cut(s) 172, 344, 1548, 2014, 2405
BsmBI CGTCTC 2 cut(s) 172, 2405
BsmFI GGGAC 6 cut(s) 1317, 1423, 1684, 2341, 2560, 2786
BsmI GAATGC 1 cut(s) 1167
BsnI GGCC 5 cut(s) 907, 1518, 1746, 1813, 2417
Bso31I GGTCTC 1 cut(s) 344
BsoBI CYCGRG 1 cut(s) 2821
Bsp120I GGGCCC 2 cut(s) 905, 1744
Bsp1286I GDGCHC 5 cut(s) 909, 1047, 1428, 1748, 2279
Bsp13I TCCGGA 1 cut(s) 2720
Bsp1407I TGTACA 1 cut(s) 1088
BspACI CCGC 4 cut(s) 420, 796, 1152, 2253
BspANI GGCC 5 cut(s) 907, 1518, 1746, 1813, 2417
BspCNI CTCAG 7 cut(s) 132, 1203, 1327, 1601, 2024, 2073, 2136
BspDI ATCGAT 1 cut(s) 2269
BspEI TCCGGA 1 cut(s) 2720
BspHI TCATGA 2 cut(s) 1428, 1459
BspMAI CTGCAG 2 cut(s) 1511, 2135
BspPI GGATC 4 cut(s) 209, 584, 2085, 2232
BspT107I GGYRCC 1 cut(s) 1984
BspTNI GGTCTC 1 cut(s) 344
BsrGI TGTACA 1 cut(s) 1088
BsrI ACTGG 7 cut(s) 1260, 1438, 1469, 1960, 2040, 2179, 2581
BssECI CCNNGG 5 cut(s) 976, 1707, 2541, 2821, 2914
BssNAI GTATAC 1 cut(s) 1892
BssNI GRCGYC 2 cut(s) 439, 1985
BssT1I CCWWGG 3 cut(s) 976, 1707, 2541
Bst1107I GTATAC 1 cut(s) 1892
Bst4CI ACNGT 4 cut(s) 120, 287, 1088, 2815
Bst6I CTCTTC 5 cut(s) 168, 637, 1056, 2286, 2295
BstACI GRCGYC 2 cut(s) 439, 1985
BstAUI TGTACA 1 cut(s) 1088
BstC8I GCNNGC 4 cut(s) 1043, 1149, 2138, 2419
BstEII GGTNACC 1 cut(s) 533
BstF5I GGATG 4 cut(s) 312, 791, 1979, 2786
BstH2I RGCGCY 3 cut(s) 188, 1988, 2910
BstHHI GCGC 4 cut(s) 187, 1987, 2834, 2909
BstMAI GTCTC 5 cut(s) 172, 344, 1548, 2014, 2405
BstMWI GCNNNNNNNGC 4 cut(s) 1515, 1529, 2233, 3023
BstNSI RCATGY 1 cut(s) 709
BstPI GGTNACC 1 cut(s) 533
BstSCI CCNGG 3 cut(s) 1808, 2820, 2821
BstSFI CTRYAG 3 cut(s) 1411, 1507, 2131
BstSLI GKGCMC 2 cut(s) 909, 1748
BstV1I GCAGC 9 cut(s) 242, 684, 1023, 2127, 2145, 2541, 2623, 2846, 3029
BstV2I GAAGAC 1 cut(s) 951
BstX2I RGATCY 3 cut(s) 1027, 1861, 2077
BstXI CCANNNNNNTGG 3 cut(s) 1208, 1608, 1667
BstYI RGATCY 3 cut(s) 1027, 1861, 2077
BstZ17I GTATAC 1 cut(s) 1892
Bsu15I ATCGAT 1 cut(s) 2269
Bsu36I CCTNAGG 1 cut(s) 1156
BsuRI GGCC 5 cut(s) 907, 1518, 1746, 1813, 2417
BsuTUI ATCGAT 1 cut(s) 2269
BtsCI GGATG 4 cut(s) 312, 791, 1979, 2786
BtsIMutI CAGTG 3 cut(s) 125, 786, 1198
Cac8I GCNNGC 4 cut(s) 1043, 1149, 2138, 2419
CciI TCATGA 2 cut(s) 1428, 1459
CfoI GCGC 4 cut(s) 187, 1987, 2834, 2909
Cfr9I CCCGGG 1 cut(s) 2821
ClaI ATCGAT 1 cut(s) 2269
CseI GACGC 1 cut(s) 2617
Csp6I GTAC 6 cut(s) 288, 643, 1002, 1089, 1853, 2207
CviQI GTAC 6 cut(s) 288, 643, 1002, 1089, 1853, 2207
DinI GGCGCC 1 cut(s) 1986
DriI GACNNNNNGTC 1 cut(s) 1696
EaeI YGGCCR 1 cut(s) 2415
Eam1104I CTCTTC 5 cut(s) 168, 637, 1056, 2286, 2295
Eam1105I GACNNNNNGTC 1 cut(s) 1696
EarI CTCTTC 5 cut(s) 168, 637, 1056, 2286, 2295
Ecl136II GAGCTC 1 cut(s) 1045
Eco130I CCWWGG 3 cut(s) 976, 1707, 2541
Eco24I GRGCYC 4 cut(s) 909, 1047, 1428, 1748
Eco31I GGTCTC 1 cut(s) 344
Eco32I GATATC 1 cut(s) 1623
Eco47I GGWCC 7 cut(s) 310, 664, 1284, 1437, 1698, 2328, 2800
Eco47III AGCGCT 2 cut(s) 186, 2908
Eco53kI GAGCTC 1 cut(s) 1045
Eco57I CTGAAG 2 cut(s) 1196, 2718
Eco81I CCTNAGG 1 cut(s) 1156
Eco88I CYCGRG 1 cut(s) 2821
Eco91I GGTNACC 1 cut(s) 533
EcoICRI GAGCTC 1 cut(s) 1045
EcoO109I RGGNCCY 6 cut(s) 906, 1437, 1517, 1744, 1745, 2800
EcoO65I GGTNACC 1 cut(s) 533
EcoRI GAATTC 3 cut(s) 325, 444, 2727
EcoRV GATATC 1 cut(s) 1623
EcoT14I CCWWGG 3 cut(s) 976, 1707, 2541
EcoT22I ATGCAT 1 cut(s) 167
EcoT38I GRGCYC 4 cut(s) 909, 1047, 1428, 1748
EgeI GGCGCC 1 cut(s) 1986
EheI GGCGCC 1 cut(s) 1986
ErhI CCWWGG 3 cut(s) 976, 1707, 2541
Esp3I CGTCTC 2 cut(s) 172, 2405
FalI AAGNNNNNCTT 9 cut(s) 1554, 1586, 2170, 2202, 2656, 2688, 2716, 2748, 3046
FaqI GGGAC 6 cut(s) 1317, 1423, 1684, 2341, 2560, 2786
FauI CCCGC 1 cut(s) 803
FauNDI CATATG 1 cut(s) 2223
FbaI TGATCA 3 cut(s) 331, 1831, 2854
FblI GTMKAC 2 cut(s) 1494, 1891
FokI GGATG 4 cut(s) 319, 778, 1986, 2773
FriOI GRGCYC 4 cut(s) 909, 1047, 1428, 1748
FspBI CTAG 5 cut(s) 1166, 1319, 1764, 1970, 2066
GlaI GCGC 4 cut(s) 186, 1986, 2833, 2908
GsaI CCCAGC 4 cut(s) 527, 772, 849, 1780
GsuI CTGGAG 3 cut(s) 1977, 2023, 2956
HaeII RGCGCY 3 cut(s) 188, 1988, 2910
HaeIII GGCC 5 cut(s) 907, 1518, 1746, 1813, 2417
HapII CCGG 6 cut(s) 222, 1122, 1696, 1809, 2721, 2822
HgaI GACGC 1 cut(s) 2617
HhaI GCGC 4 cut(s) 187, 1987, 2834, 2909
Hin1I GRCGYC 2 cut(s) 439, 1985
Hin6I GCGC 4 cut(s) 185, 1985, 2832, 2907
HinP1I GCGC 4 cut(s) 185, 1985, 2832, 2907
HincII GTYRAC 2 cut(s) 703, 1495
HindII GTYRAC 2 cut(s) 703, 1495
HindIII AAGCTT 3 cut(s) 464, 1673, 2059
HpaII CCGG 6 cut(s) 222, 1122, 1696, 1809, 2721, 2822
HphI GGTGA 7 cut(s) 184, 1151, 1316, 2482, 2519, 2633, 2864
Hpy166II GTNNAC 7 cut(s) 664, 703, 784, 1142, 1324, 1495, 1892
Hpy8I GTNNAC 7 cut(s) 664, 703, 784, 1142, 1324, 1495, 1892
Hpy99I CGWCG 1 cut(s) 444
HpyCH4III ACNGT 4 cut(s) 120, 287, 1088, 2815
HpyCH4IV ACGT 3 cut(s) 403, 439, 2379
HpyF10VI GCNNNNNNNGC 4 cut(s) 1515, 1529, 2233, 3023
HpySE526I ACGT 3 cut(s) 403, 439, 2379
Hsp92I GRCGYC 2 cut(s) 439, 1985
HspAI GCGC 4 cut(s) 185, 1985, 2832, 2907
KasI GGCGCC 1 cut(s) 1984
KflI GGGWCCC 2 cut(s) 1437, 2800
Kpn2I TCCGGA 1 cut(s) 2720
Ksp22I TGATCA 3 cut(s) 331, 1831, 2854
Lsp1109I GCAGC 9 cut(s) 242, 684, 1023, 2127, 2145, 2541, 2623, 2846, 3029
LweI GCATC 3 cut(s) 101, 174, 1789
MaeI CTAG 5 cut(s) 1166, 1319, 1764, 1970, 2066
MaeII ACGT 3 cut(s) 403, 439, 2379
MaeIII GTNAC 7 cut(s) 208, 404, 533, 1107, 1193, 1564, 2375
MfeI CAATTG 1 cut(s) 3027
MflI RGATCY 3 cut(s) 1027, 1861, 2077
MhlI GDGCHC 5 cut(s) 909, 1047, 1428, 1748, 2279
Mly113I GGCGCC 1 cut(s) 1985
MlyI GAGTC 4 cut(s) 1115, 1720, 1987, 2452
MmeI TCCRAC 6 cut(s) 1329, 1374, 1504, 1527, 1623, 2265
Mph1103I ATGCAT 1 cut(s) 167
MroI TCCGGA 1 cut(s) 2720
MroXI GAANNNNTTC 2 cut(s) 1076, 2731
MslI CAYNNNNRTG 4 cut(s) 160, 1881, 2791, 2862
MspA1I CMGCKG 4 cut(s) 849, 2136, 2614, 2837
MspI CCGG 6 cut(s) 222, 1122, 1696, 1809, 2721, 2822
MspR9I CCNGG 3 cut(s) 1810, 2822, 2823
MunI CAATTG 1 cut(s) 3027
Mva1269I GAATGC 1 cut(s) 1167
MwoI GCNNNNNNNGC 4 cut(s) 1515, 1529, 2233, 3023
NarI GGCGCC 1 cut(s) 1985
NciI CCSGG 3 cut(s) 1810, 2822, 2823
NdeI CATATG 1 cut(s) 2223
NmeAIII GCCGAG 1 cut(s) 2895
NmuCI GTSAC 3 cut(s) 1107, 1193, 1564
NsiI ATGCAT 1 cut(s) 167
NspI RCATGY 1 cut(s) 709
PagI TCATGA 2 cut(s) 1428, 1459
PcsI WCGNNNNNNNCGW 1 cut(s) 1500
PctI GAATGC 1 cut(s) 1167
PdmI GAANNNNTTC 2 cut(s) 1076, 2731
PfeI GAWTC 6 cut(s) 517, 823, 1468, 1816, 2656, 2991
PflFI GACNNNGTC 1 cut(s) 1435
PflMI CCANNNNNTGG 1 cut(s) 530
PleI GAGTC 4 cut(s) 1114, 1720, 1986, 2452
PluTI GGCGCC 1 cut(s) 1988
PpsI GAGTC 4 cut(s) 1114, 1720, 1986, 2452
PpuMI RGGWCCY 2 cut(s) 1437, 2800
PshBI ATTAAT 2 cut(s) 372, 831
Psp124BI GAGCTC 1 cut(s) 1047
Psp5II RGGWCCY 2 cut(s) 1437, 2800
PspEI GGTNACC 1 cut(s) 533
PspFI CCCAGC 4 cut(s) 523, 768, 845, 1776
PspOMI GGGCCC 2 cut(s) 905, 1744
PspPPI RGGWCCY 2 cut(s) 1437, 2800
PsrI GAACNNNNNNTAC 2 cut(s) 389, 421
PstI CTGCAG 2 cut(s) 1511, 2135
PsuI RGATCY 3 cut(s) 1027, 1861, 2077
PsyI GACNNNGTC 1 cut(s) 1435
PvuII CAGCTG 4 cut(s) 849, 2136, 2614, 2837
RsaI GTAC 6 cut(s) 289, 644, 1003, 1090, 1854, 2208
RsaNI GTAC 6 cut(s) 288, 643, 1002, 1089, 1853, 2207
RseI CAYNNNNRTG 4 cut(s) 160, 1881, 2791, 2862
SacI GAGCTC 1 cut(s) 1047
SalI GTCGAC 1 cut(s) 1493
SchI GAGTC 4 cut(s) 1115, 1720, 1987, 2452
ScrFI CCNGG 3 cut(s) 1810, 2822, 2823
SduI GDGCHC 5 cut(s) 909, 1047, 1428, 1748, 2279
SfaNI GCATC 3 cut(s) 101, 174, 1789
SfcI CTRYAG 3 cut(s) 1411, 1507, 2131
SfoI GGCGCC 1 cut(s) 1986
SinI GGWCC 7 cut(s) 310, 664, 1284, 1437, 1698, 2328, 2800
SmaI CCCGGG 1 cut(s) 2823
SmiMI CAYNNNNRTG 4 cut(s) 160, 1881, 2791, 2862
SmlI CTYRAG 2 cut(s) 932, 1538
SmoI CTYRAG 2 cut(s) 932, 1538
SsiI CCGC 4 cut(s) 420, 796, 1152, 2253
SspDI GGCGCC 1 cut(s) 1984
SspI AATATT 2 cut(s) 1023, 2405
SspMI CTAG 5 cut(s) 1166, 1319, 1764, 1970, 2066
SstI GAGCTC 1 cut(s) 1047
StyD4I CCNGG 3 cut(s) 1808, 2820, 2821
StyI CCWWGG 3 cut(s) 976, 1707, 2541
TaaI ACNGT 4 cut(s) 120, 287, 1088, 2815
TaiI ACGT 3 cut(s) 406, 442, 2382
TaqI TCGA 8 cut(s) 168, 442, 1329, 1494, 2269, 2367, 2445, 2989
TatI WGTACW 1 cut(s) 1088
TauI GCSGC 1 cut(s) 1154
TfiI GAWTC 6 cut(s) 517, 823, 1468, 1816, 2656, 2991
TscAI CASTG 3 cut(s) 125, 786, 1198
TseFI GTSAC 3 cut(s) 1107, 1193, 1564
TseI GCWGC 9 cut(s) 255, 672, 1011, 2133, 2140, 2529, 2611, 2834, 3017
Tsp45I GTSAC 3 cut(s) 1107, 1193, 1564
TspGWI ACGGA 2 cut(s) 765, 1574
TspMI CCCGGG 1 cut(s) 2821
TspRI CASTG 3 cut(s) 125, 786, 1198
Tth111I GACNNNGTC 1 cut(s) 1435
Van91I CCANNNNNTGG 1 cut(s) 530
VpaK11BI GGWCC 7 cut(s) 310, 664, 1284, 1437, 1698, 2328, 2800
VspI ATTAAT 2 cut(s) 372, 831
XceI RCATGY 1 cut(s) 709
XcmI CCANNNNNNNNNTGG 1 cut(s) 1902
XmaI CCCGGG 1 cut(s) 2821
XmiI GTMKAC 2 cut(s) 1494, 1891
XmnI GAANNNNTTC 2 cut(s) 1076, 2731
XspI CTAG 5 cut(s) 1166, 1319, 1764, 1970, 2066
ZraI GACGTC 1 cut(s) 440
Zsp2I ATGCAT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.