Rorug05G0167500

DDRGK domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0008682
Physical Location & Seq
Reverse (-)
15554007 .. 15559665
5659 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0167500.1

Sequence Viewer

Length: 1494 bp
ATGGCGAGCCATCTCTTCACCTACGGCGCCGCCCAATCAGCTCCAGCTCCCACTCCTGCTCTCTCCACCGTCTACACCCCTCGCTCCCTAGCCCAATCCTACCTCTCCGACCCGGCCCACCGCTACCTTTCCGGGTCGGACCCTCTCTCCACTTCCTCCATGTACCTCGCCGGCACCGATGGCCTCGGCGCTTACTCCGACGCTGCCAGAGCGACGTCGTATATGATGTCATCGTGGCCCGCCCCGGATGCCGAACCCGGGCCGCCGGGCTTCAAACGCACCTCTGAAGCACTCTACCATCAGGCTCTTTTGGGTGCCCATAATCCGATTGGGCAAATGGAAGCTTGGTATTCGACAAATCCTTTAGCAAAGCGACCTAGATTCGAGAATACAAGCTTGCCTATTTATCCACAGAGGCCAGGAGAGAAAGATTGTGTCCACTATATGCAAACAAGAACCTGTAAATTTGGAGAGGGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGATGGTGGAATCCCAGATTGGAAAGAGGTTCCACTTGTTGCTCCAAGTGAGTCCCTTCCCGAGAGACCTGGAGTGCCCGATTGTCCATACTTTTTAAAAACTCAAAGATGCAAGTTTGGTCTTAGATGCAAGTTTAATCATCCAAAGGACAATCTGGCCACTGCGGGCGCTTCAGAAAATGGTGATGTTTATGCCTTACCCGAGAGGCCTTCTGAACCCGCATGTGCATTCTACTTGAAAACTGGGCAATGCAAGTATGGTGCAACCTGCAAATTTAATCACCCAAAAGACATCCAGATACCATCAGCCACTCAAGAGAATAAATCTGGCGAAACTGAGACAGATCTTAAGACGGAGGGCAGTGAAGTTGCTGTGAAGCCTCTTGTTTCATTCACTCCAGCACTATTGTATAACTCCAAAGAGCTTCCTGTAAGACCGGGTGAAGCTGATTGTCCGTTCTACCTGAAAACTGGAAGCTGCAAGTATGGGGCCACTTGCCGGTACAATCACCCTGATAGATATGATATCAATCCACCTGTTGCTGCAATCAGCTATCCTCTTTCAGCGCCTGCAGTTGCAGGTTTTAACATAGGAGTTGCTAGTCCAGCTGCCTTCACTTATCAAACTTTGGCACAACCAACGGTGGGAGCGAGCCCTACTGTTTATCCTCAGCGCTTTGGACAGGCTGAGTGTGAATACTATATGAAGACTGGGGAATGCAAGTATGGTGCACAATGCAGATTCCATCACCCGATTGATAGGCCAGCAGTGGCGTTGTCAACAACAAAGCCATCTCAACAAGAAAATGTGAAGCTAACGCTTGCTGGACTTCCTAGGAGAGAGGGTGCCGTTATCTGTGTGTATTATCTTAAAACCGGCACATGCAAGTATGGTGCAACCTGCAGATTTGACCACCCACCTCCTGGCGAAGTTGTAGCAATGGCAGCTTCACAAGCAAAATCTGATTCTACCGGAGGAAAAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDRGK

Protein Analysis

497

Amino Acids

53.88

Weight (kDa)

8.17

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 141 - 165 4e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 193 - 218 8.8e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 241 - 265 4.6e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 316 - 340 4.9e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_DUS3L PF25585 317 - 339 6.4e-07 DUS3L CCCH zinc finger domain
zf-CCCH PF00642 395 - 420 1e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 453 - 476 4.7e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4 PF18345 455 - 474 1.1e-06 Zinc finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 218
Acc36I ACCTGC 3 cut(s) 782, 1076, 1415
AccB1I GGYRCC 4 cut(s) 26, 173, 314, 1352
AccB7I CCANNNNNTGG 1 cut(s) 1430
AccI GTMKAC 1 cut(s) 72
AciI CCGC 6 cut(s) 30, 121, 240, 263, 671, 726
AcoI YGGCCR 1 cut(s) 663
AcsI RAATTY 2 cut(s) 464, 779
AcuI CTGAAG 2 cut(s) 306, 663
AcyI GRCGYC 2 cut(s) 27, 215
AfaI GTAC 2 cut(s) 164, 1010
AfeI AGCGCT 1 cut(s) 1181
AfiI CCNNNNNNNGG 5 cut(s) 258, 512, 1005, 1151, 1430
AflII CTTAAG 1 cut(s) 854
AgsI TTSAA 2 cut(s) 274, 745
AjnI CCWGG 3 cut(s) 418, 574, 1429
AjuI GAANNNNNNNTTGG 2 cut(s) 508, 540
Alw21I GWGCWC 1 cut(s) 1240
Alw26I GTCTC 2 cut(s) 565, 839
Alw44I GTGCAC 1 cut(s) 1236
AlwNI CAGNNNCTG 1 cut(s) 1076
Ama87I CYCGRG 3 cut(s) 257, 566, 707
Aor51HI AGCGCT 1 cut(s) 1181
AoxI GGCC 9 cut(s) 114, 181, 236, 260, 416, 663, 713, 996, 1268
ApaLI GTGCAC 1 cut(s) 1236
ApeKI GCWGC 6 cut(s) 203, 477, 984, 1049, 1115, 1451
ApoI RAATTY 2 cut(s) 464, 779
AspA2I CCTAGG 1 cut(s) 1340
AspLEI GCGC 5 cut(s) 29, 191, 677, 1075, 1182
AspS9I GGNCC 5 cut(s) 115, 139, 237, 260, 996
AsuC2I CCSGG 7 cut(s) 113, 133, 245, 258, 259, 267, 945
AsuHPI GGTGA 6 cut(s) 10, 701, 779, 959, 1007, 1247
AvaI CYCGRG 3 cut(s) 257, 566, 707
AvaII GGWCC 1 cut(s) 139
AvrII CCTAGG 1 cut(s) 1340
BaeGI GKGCMC 3 cut(s) 319, 585, 1240
BalI TGGCCA 1 cut(s) 665
BanI GGYRCC 4 cut(s) 26, 173, 314, 1352
BanII GRGCYC 1 cut(s) 1163
BbsI GAAGAC 1 cut(s) 1220
Bbv12I GWGCWC 1 cut(s) 1240
BbvCI CCTCAGC 1 cut(s) 1176
BbvI GCAGC 6 cut(s) 190, 464, 971, 1036, 1102, 1463
BccI CCATC 8 cut(s) 18, 173, 306, 498, 503, 817, 1260, 1306
BceAI ACGGC 2 cut(s) 40, 1340
BciT130I CCWGG 3 cut(s) 420, 576, 1431
BcnI CCSGG 7 cut(s) 113, 133, 245, 258, 259, 267, 945
BcoDI GTCTC 2 cut(s) 565, 839
BfaI CTAG 4 cut(s) 89, 378, 1107, 1341
BfmI CTRYAG 2 cut(s) 1077, 1408
BfoI RGCGCY 5 cut(s) 30, 192, 678, 1076, 1183
BfrI CTTAAG 1 cut(s) 854
BfuAI ACCTGC 3 cut(s) 782, 1076, 1415
BglII AGATCT 1 cut(s) 850
BisI GCNGC 8 cut(s) 30, 204, 263, 478, 985, 1050, 1116, 1452
BlnI CCTAGG 1 cut(s) 1340
BlsI GCNGC 8 cut(s) 31, 205, 264, 479, 986, 1051, 1117, 1453
Bme18I GGWCC 1 cut(s) 139
BmeT110I CYCGRG 3 cut(s) 257, 566, 707
BmgT120I GGNCC 5 cut(s) 115, 139, 237, 260, 996
BmiI GGNNCC 8 cut(s) 28, 141, 175, 316, 504, 537, 997, 1354
BmrI ACTGGG 2 cut(s) 759, 1227
BmsI GCATC 3 cut(s) 238, 605, 623
BmuI ACTGGG 2 cut(s) 759, 1227
BpiI GAAGAC 1 cut(s) 1220
BpmI CTGGAG 3 cut(s) 27, 597, 888
Bpu10I CCTNAGC 1 cut(s) 1176
BpuEI CTTGAG 1 cut(s) 804
BpuMI CCSGG 7 cut(s) 113, 133, 245, 258, 259, 267, 945
BsaBI GATNNNNATC 1 cut(s) 1035
BsaHI GRCGYC 2 cut(s) 27, 215
BsaI GGTCTC 1 cut(s) 565
BsaJI CCNNGG 4 cut(s) 184, 243, 257, 1340
BsaWI WCCGGW 1 cut(s) 1478
BsaXI ACNNNNNCTCC 4 cut(s) 131, 161, 1336, 1366
Bsc4I CCNNNNNNNGG 5 cut(s) 258, 512, 1005, 1151, 1430
Bse118I RCCGGY 3 cut(s) 170, 1005, 1382
Bse1I ACTGG 3 cut(s) 754, 982, 1222
Bse3DI GCAATG 2 cut(s) 761, 1452
Bse8I GATNNNNATC 1 cut(s) 1035
BseBI CCWGG 3 cut(s) 420, 576, 1431
BseDI CCNNGG 4 cut(s) 184, 243, 257, 1340
BseGI GGATG 4 cut(s) 253, 490, 646, 798
BseJI GATNNNNATC 1 cut(s) 1035
BseLI CCNNNNNNNGG 5 cut(s) 258, 512, 1005, 1151, 1430
BseMI GCAATG 2 cut(s) 761, 1452
BseMII CTCAG 3 cut(s) 834, 1185, 1190
BseNI ACTGG 3 cut(s) 754, 982, 1222
BseSI GKGCMC 3 cut(s) 319, 585, 1240
BseXI GCAGC 6 cut(s) 190, 464, 971, 1036, 1102, 1463
BshFI GGCC 9 cut(s) 116, 183, 238, 262, 418, 665, 715, 998, 1270
BshNI GGYRCC 4 cut(s) 26, 173, 314, 1352
BsiHKAI GWGCWC 1 cut(s) 1240
BsiHKCI CYCGRG 3 cut(s) 257, 566, 707
BslFI GGGAC 1 cut(s) 544
BslI CCNNNNNNNGG 5 cut(s) 258, 512, 1005, 1151, 1430
BsmAI GTCTC 2 cut(s) 565, 839
BsmFI GGGAC 1 cut(s) 544
BsmI GAATGC 2 cut(s) 734, 1229
BsnI GGCC 9 cut(s) 116, 183, 238, 262, 418, 665, 715, 998, 1270
Bso31I GGTCTC 1 cut(s) 565
BsoBI CYCGRG 3 cut(s) 257, 566, 707
Bsp1286I GDGCHC 4 cut(s) 319, 585, 1163, 1240
Bsp143I GATC 1 cut(s) 850
BspACI CCGC 6 cut(s) 30, 121, 240, 263, 671, 726
BspANI GGCC 9 cut(s) 116, 183, 238, 262, 418, 665, 715, 998, 1270
BspCNI CTCAG 3 cut(s) 835, 1186, 1189
BspLI GGNNCC 8 cut(s) 28, 141, 175, 316, 504, 537, 997, 1354
BspMAI CTGCAG 2 cut(s) 1081, 1412
BspMI ACCTGC 3 cut(s) 782, 1076, 1415
BspT107I GGYRCC 4 cut(s) 26, 173, 314, 1352
BspTI CTTAAG 1 cut(s) 854
BspTNI GGTCTC 1 cut(s) 565
BsrDI GCAATG 2 cut(s) 761, 1452
BsrFI RCCGGY 3 cut(s) 170, 1005, 1382
BsrI ACTGG 3 cut(s) 754, 982, 1222
BssAI RCCGGY 3 cut(s) 170, 1005, 1382
BssECI CCNNGG 4 cut(s) 184, 243, 257, 1340
BssMI GATC 1 cut(s) 850
BssNI GRCGYC 2 cut(s) 27, 215
BssT1I CCWWGG 1 cut(s) 1340
Bst2UI CCWGG 3 cut(s) 420, 576, 1431
Bst4CI ACNGT 3 cut(s) 70, 1150, 1168
Bst6I CTCTTC 1 cut(s) 20
BstACI GRCGYC 2 cut(s) 27, 215
BstAFI CTTAAG 1 cut(s) 854
BstC8I GCNNGC 9 cut(s) 7, 172, 240, 398, 673, 1077, 1159, 1272, 1329
BstDEI CTNAG 4 cut(s) 629, 843, 1176, 1194
BstF5I GGATG 4 cut(s) 253, 490, 646, 798
BstH2I RGCGCY 5 cut(s) 30, 192, 678, 1076, 1183
BstHHI GCGC 5 cut(s) 29, 191, 677, 1075, 1182
BstKTI GATC 1 cut(s) 853
BstMAI GTCTC 2 cut(s) 565, 839
BstMBI GATC 1 cut(s) 850
BstMWI GCNNNNNNNGC 8 cut(s) 38, 180, 209, 248, 276, 1112, 1451, 1460
BstNI CCWGG 3 cut(s) 420, 576, 1431
BstNSI RCATGY 2 cut(s) 732, 1392
BstSFI CTRYAG 2 cut(s) 1077, 1408
BstSLI GKGCMC 3 cut(s) 319, 585, 1240
BstV1I GCAGC 6 cut(s) 190, 464, 971, 1036, 1102, 1463
BstV2I GAAGAC 1 cut(s) 1220
BstX2I RGATCY 1 cut(s) 850
BstYI RGATCY 1 cut(s) 850
BsuRI GGCC 9 cut(s) 116, 183, 238, 262, 418, 665, 715, 998, 1270
BtsCI GGATG 4 cut(s) 253, 490, 646, 798
BtsI GCAGTG 3 cut(s) 666, 874, 1281
BtsIMutI CAGTG 3 cut(s) 666, 874, 1281
BveI ACCTGC 3 cut(s) 782, 1076, 1415
Cac8I GCNNGC 9 cut(s) 7, 172, 240, 398, 673, 1077, 1159, 1272, 1329
CaiI CAGNNNCTG 1 cut(s) 1076
CfoI GCGC 5 cut(s) 29, 191, 677, 1075, 1182
Cfr10I RCCGGY 3 cut(s) 170, 1005, 1382
Cfr13I GGNCC 5 cut(s) 115, 139, 237, 260, 996
Cfr9I CCCGGG 1 cut(s) 257
CseI GACGC 1 cut(s) 209
Csp6I GTAC 2 cut(s) 163, 1009
CviAII CATG 3 cut(s) 160, 729, 1389
CviQI GTAC 2 cut(s) 163, 1009
DdeI CTNAG 4 cut(s) 629, 843, 1176, 1194
DinI GGCGCC 1 cut(s) 28
DpnI GATC 1 cut(s) 852
DpnII GATC 1 cut(s) 850
DraI TTTAAA 1 cut(s) 603
EaeI YGGCCR 1 cut(s) 663
Eam1104I CTCTTC 1 cut(s) 20
EarI CTCTTC 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 1340
Eco147I AGGCCT 1 cut(s) 715
Eco24I GRGCYC 1 cut(s) 1163
Eco31I GGTCTC 1 cut(s) 565
Eco32I GATATC 1 cut(s) 1033
Eco47I GGWCC 1 cut(s) 139
Eco47III AGCGCT 1 cut(s) 1181
Eco57I CTGAAG 2 cut(s) 306, 663
Eco88I CYCGRG 3 cut(s) 257, 566, 707
EcoRII CCWGG 3 cut(s) 418, 574, 1429
EcoRV GATATC 1 cut(s) 1033
EcoT14I CCWWGG 1 cut(s) 1340
EcoT38I GRGCYC 1 cut(s) 1163
EgeI GGCGCC 1 cut(s) 28
EheI GGCGCC 1 cut(s) 28
ErhI CCWWGG 1 cut(s) 1340
FaeI CATG 3 cut(s) 163, 732, 1392
FaqI GGGAC 1 cut(s) 544
FatI CATG 3 cut(s) 159, 728, 1388
FauI CCCGC 3 cut(s) 247, 664, 733
FblI GTMKAC 1 cut(s) 72
Fnu4HI GCNGC 8 cut(s) 30, 204, 263, 478, 985, 1050, 1116, 1452
FokI GGATG 4 cut(s) 260, 477, 633, 785
FriOI GRGCYC 1 cut(s) 1163
Fsp4HI GCNGC 8 cut(s) 30, 204, 263, 478, 985, 1050, 1116, 1452
FspBI CTAG 4 cut(s) 89, 378, 1107, 1341
GlaI GCGC 5 cut(s) 28, 190, 676, 1074, 1181
GluI GCNGC 8 cut(s) 30, 204, 263, 478, 985, 1050, 1116, 1452
GsuI CTGGAG 3 cut(s) 27, 597, 888
HaeII RGCGCY 5 cut(s) 30, 192, 678, 1076, 1183
HaeIII GGCC 9 cut(s) 116, 183, 238, 262, 418, 665, 715, 998, 1270
HgaI GACGC 1 cut(s) 209
HhaI GCGC 5 cut(s) 29, 191, 677, 1075, 1182
Hin1I GRCGYC 2 cut(s) 27, 215
Hin1II CATG 3 cut(s) 163, 732, 1392
Hin6I GCGC 5 cut(s) 27, 189, 675, 1073, 1180
HinP1I GCGC 5 cut(s) 27, 189, 675, 1073, 1180
HincII GTYRAC 1 cut(s) 1287
HindII GTYRAC 1 cut(s) 1287
HindIII AAGCTT 2 cut(s) 342, 394
HinfI GANTC 5 cut(s) 381, 516, 557, 1248, 1472
HphI GGTGA 6 cut(s) 10, 701, 779, 959, 1007, 1247
Hpy166II GTNNAC 4 cut(s) 73, 439, 1238, 1287
Hpy188I TCNGA 8 cut(s) 109, 139, 199, 286, 327, 682, 721, 1471
Hpy188III TCNNGA 5 cut(s) 385, 506, 566, 802, 821
Hpy8I GTNNAC 4 cut(s) 73, 439, 1238, 1287
Hpy99I CGWCG 3 cut(s) 203, 217, 220
HpyAV CCTTC 3 cut(s) 572, 726, 1129
HpyCH4III ACNGT 3 cut(s) 70, 1150, 1168
HpyCH4IV ACGT 1 cut(s) 215
HpyF10VI GCNNNNNNNGC 8 cut(s) 38, 180, 209, 248, 276, 1112, 1451, 1460
HpyF3I CTNAG 4 cut(s) 629, 843, 1176, 1194
HpySE526I ACGT 1 cut(s) 215
Hsp92I GRCGYC 2 cut(s) 27, 215
Hsp92II CATG 3 cut(s) 163, 732, 1392
HspAI GCGC 5 cut(s) 27, 189, 675, 1073, 1180
KasI GGCGCC 1 cut(s) 26
KroI GCCGGC 1 cut(s) 170
KroNI GCCGGC 1 cut(s) 172
Kzo9I GATC 1 cut(s) 850
LmnI GCTCC 5 cut(s) 46, 52, 89, 553, 1154
Lsp1109I GCAGC 6 cut(s) 190, 464, 971, 1036, 1102, 1463
LweI GCATC 3 cut(s) 238, 605, 623
MaeI CTAG 4 cut(s) 89, 378, 1107, 1341
MaeII ACGT 1 cut(s) 215
MalI GATC 1 cut(s) 852
MboI GATC 1 cut(s) 850
MboII GAAGA 2 cut(s) 7, 1225
MflI RGATCY 1 cut(s) 850
MhlI GDGCHC 4 cut(s) 319, 585, 1163, 1240
MlsI TGGCCA 1 cut(s) 665
MluCI AATT 2 cut(s) 464, 779
MluNI TGGCCA 1 cut(s) 665
Mly113I GGCGCC 1 cut(s) 27
MlyI GAGTC 1 cut(s) 566
MmeI TCCRAC 3 cut(s) 117, 132, 222
Mox20I TGGCCA 1 cut(s) 665
MroNI GCCGGC 1 cut(s) 170
MscI TGGCCA 1 cut(s) 665
MseI TTAA 6 cut(s) 602, 642, 783, 855, 1092, 1377
Msp20I TGGCCA 1 cut(s) 665
MspA1I CMGCKG 1 cut(s) 1115
MspCI CTTAAG 1 cut(s) 854
Mva1269I GAATGC 2 cut(s) 734, 1229
MvaI CCWGG 3 cut(s) 420, 576, 1431
MwoI GCNNNNNNNGC 8 cut(s) 38, 180, 209, 248, 276, 1112, 1451, 1460
NaeI GCCGGC 1 cut(s) 172
NarI GGCGCC 1 cut(s) 27
NciI CCSGG 7 cut(s) 113, 133, 245, 258, 259, 267, 945
NdeII GATC 1 cut(s) 850
NgoMIV GCCGGC 1 cut(s) 170
NlaIII CATG 3 cut(s) 163, 732, 1392
NlaIV GGNNCC 8 cut(s) 28, 141, 175, 316, 504, 537, 997, 1354
NmeAIII GCCGAG 1 cut(s) 165
NspI RCATGY 2 cut(s) 732, 1392
PceI AGGCCT 1 cut(s) 715
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 1154
PctI GAATGC 2 cut(s) 734, 1229
PdiI GCCGGC 1 cut(s) 172
PfeI GAWTC 4 cut(s) 381, 516, 1248, 1472
PflMI CCANNNNNTGG 1 cut(s) 1430
PkrI GCNGC 8 cut(s) 31, 205, 264, 479, 986, 1051, 1117, 1453
PleI GAGTC 1 cut(s) 565
PluTI GGCGCC 1 cut(s) 30
PpsI GAGTC 1 cut(s) 565
Psp6I CCWGG 3 cut(s) 418, 574, 1429
PspGI CCWGG 3 cut(s) 418, 574, 1429
PspN4I GGNNCC 8 cut(s) 28, 141, 175, 316, 504, 537, 997, 1354
PspPI GGNCC 5 cut(s) 115, 139, 237, 260, 996
PstI CTGCAG 2 cut(s) 1081, 1412
PstNI CAGNNNCTG 1 cut(s) 1076
PsuI RGATCY 1 cut(s) 850
PvuII CAGCTG 1 cut(s) 1115
RsaI GTAC 2 cut(s) 164, 1010
RsaNI GTAC 2 cut(s) 163, 1009
SaqAI TTAA 6 cut(s) 602, 642, 783, 855, 1092, 1377
SatI GCNGC 8 cut(s) 30, 204, 263, 478, 985, 1050, 1116, 1452
Sau3AI GATC 1 cut(s) 850
Sau96I GGNCC 5 cut(s) 115, 139, 237, 260, 996
SchI GAGTC 1 cut(s) 566
SduI GDGCHC 4 cut(s) 319, 585, 1163, 1240
SfaNI GCATC 3 cut(s) 238, 605, 623
SfcI CTRYAG 2 cut(s) 1077, 1408
SfoI GGCGCC 1 cut(s) 28
SinI GGWCC 1 cut(s) 139
SmaI CCCGGG 1 cut(s) 259
SmlI CTYRAG 2 cut(s) 819, 854
SmoI CTYRAG 2 cut(s) 819, 854
Sse9I AATT 2 cut(s) 464, 779
SseBI AGGCCT 1 cut(s) 715
SsiI CCGC 6 cut(s) 30, 121, 240, 263, 671, 726
SspDI GGCGCC 1 cut(s) 26
SspMI CTAG 4 cut(s) 89, 378, 1107, 1341
StuI AGGCCT 1 cut(s) 715
StyI CCWWGG 1 cut(s) 1340
TaaI ACNGT 3 cut(s) 70, 1150, 1168
TaiI ACGT 1 cut(s) 218
TaqI TCGA 2 cut(s) 353, 384
TasI AATT 2 cut(s) 464, 779
TauI GCSGC 2 cut(s) 32, 265
TfiI GAWTC 4 cut(s) 381, 516, 1248, 1472
Tru1I TTAA 6 cut(s) 602, 642, 783, 855, 1092, 1377
Tru9I TTAA 6 cut(s) 602, 642, 783, 855, 1092, 1377
TscAI CASTG 3 cut(s) 673, 874, 1281
TseI GCWGC 6 cut(s) 203, 477, 984, 1049, 1115, 1451
TspDTI ATGAA 2 cut(s) 885, 1226
TspGWI ACGGA 2 cut(s) 875, 951
TspMI CCCGGG 1 cut(s) 257
TspRI CASTG 3 cut(s) 673, 874, 1281
Van91I CCANNNNNTGG 1 cut(s) 1430
Vha464I CTTAAG 1 cut(s) 854
VneI GTGCAC 1 cut(s) 1236
VpaK11BI GGWCC 1 cut(s) 139
XapI RAATTY 2 cut(s) 464, 779
XceI RCATGY 2 cut(s) 732, 1392
XcmI CCANNNNNNNNNTGG 2 cut(s) 326, 1427
XmaI CCCGGG 1 cut(s) 257
XmaJI CCTAGG 1 cut(s) 1340
XmiI GTMKAC 1 cut(s) 72
XspI CTAG 4 cut(s) 89, 378, 1107, 1341
ZraI GACGTC 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.