Rorug05G0272200

Protein of unknown function (DUF1138)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0002659
Physical Location & Seq
Forward (+)
30693979 .. 30703633
9655 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0272200.1

Sequence Viewer

Length: 2217 bp
ATGGTTGAAGAGAAAGAAGACCTCATGATTTCACCAACCGGTGGACACCCATTTCACAAAACAGCCCACTTCCTCAAACCCATCTCGCCTTCCACCCTTTTCGAGTCTTTCACCTCCCATATCCCCACCTCACCATTAGACCCAAAAAAGTGGCCATTGAAGTTTACATTCCGTGGATGGCGTCGCGAGCACCAAGACTTGCAGACTTGGGCTCACCACTTGGCTTCTACTCACCAATCCACGTGGAAGAAAGCCGGCATTTACGAACCCATCTTCAACTCGACCTACCAAATAAGAAGAAACAACGACTTGGTTTGTGGGTTTGCAGAGAAATGGTGTTGTGAGACCAACACCTTCATTTTTCCATGGGGTGAAACCACAATCACATTGGAGGATGTTATGGTTTTGGGAGGCTTCTCTGTTTTGGGAGACTCTATTTTGAGTCCTATTGAAAGCAGAGAGCTGAAAGAAATAGAAGAGAAACTTGAGAAAGAGCGAAAAGGACTTTACGATTACAGTGGGCGTAGGCGTGGGACTAAGGTGGCCAGCGCAAAGTTATGGATGAAGAAATTCATGAAGAGCGGGAGTAAACTAGAGCACCTAGCATTTCTCGTCTTTTGGTTGTCCAGGTATGTTTTCCACGGCAGTCGTGATTCAGTAAACAAGGCTGTTTTCTCCATTGCAATTCATTTAGATAGGGGCATTCGGATTGCGCTTGCACCGGCTGTTCTTGCTCACATTTATGGAGATTTGAGTCTGCTTAAAAGGACTATTGTAGCTTCAAATGCCAGTAATGAATTAAAGCTAGAGTCACCATTTCATTTAGTTCAGGTTTGGGCATGGGAAAGGTTTTTGGAACTTAGGCCAAAGCCCAATGTTATGAGCTATGCTGAGCCAAGATTGGCTAGATGGGATGGAATAGATGGTCAGGATTTCGGAAATTTGAGGATTGTTTTAGACTCTGCTGGAGAATGTTTCATGTGGCGCCCTTATGCCATTGCCATTGAAAACTGTAAGCTTCCTAGTTACTGTTCAGAAAAAGATAGGTGCGTTGGTCCTGGTTTGGATGAGGAGTTCCTTTCATTTGCTCTATGCTTGAGGGTGACTGATTTGGTTGGATTTGGTCGAAATGAGCGATACCTTCCGCATAGGGTGGCTAGGCAATTTGGATATGATCAAGATATTCCGTGTGTCATTGCTCAATCCAATGATGGTTCTGGTATTTTCATTCCTCATATATCCTGGAAAGATCACATGAAGGAAATTAAGGATGTAAAATTGTATATTCCATCTAGGCTGTCTGAGGCAGATGTGAGCACAAGATACATGAAATGGTGGGAGGAAACAGTATCAGGTCTCAAACACATAACTAAGCCTAGGATGCCACCGAAGAAGAAAGCAAAGACTACTGAGCGATCACTACTGACGGGTAAACCTGCCCTCAGGCATCCTGGTTTCCGGCGAACGAAAGTTGCTGAGGGTTCAAATGAAAGAAACAGGTTTACTGGTTTCACCATTCCTTCTGTTTCTTGTCCAAAGAGTTATGCAAAAGTAGTAAAGATTTCCAAAGTACATAATGTAGGTAATGATTCCCTTGTTCCTCCCGGATTTCCTCCCAGATATCCTCCCACAGGTAATATGATGGAAGTTGGAGACACTATGGACAAAGATGAACCGACGAGTCCAGAAATTTTGGAAAAAGGGAAGCAAAAAAACGTTGAAACTAGAAAAGGGGTTGATGATTCAATTGCTGATGGAAGTTCTGTTGATGATATTATGAAGTCAGAAAGATTGGAGAAAGAGGTTATGCTAAGTCCGACCTTGGTTTGGGGAAGAAAGGCCAAGAGGAACATTAAATATGTAATTGTGAGTAATGCAAGAAGTCTAGATAATGACATGGTAAGAACTATTGGCAATGAATGGGCTAGCAGGGTTGAGAGACAGGTTTCAGAGCTTAAAAATCTTGTAAGAAGCTTTAAAGAATCAGACATTTTGAAATATTGTAAGAAGCATAAAAATATTGAAACTAGAAGAGATGGTGACTGCGTGAAGTTGTCAGGTGAAGTTCAAGATTTGGCATCTTCAACCGTGGAAGAAGGTTCTGTTATGAAACAGGTTTCAGAGCTTAAAGCTAGGGTTAGCAAGCTTGAAAGTTTGGCTGACATGTTTCAAACAAACACTGGTGGAGCAGGTGTGGGAACAGCTAAGGAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1138

Protein Analysis

738

Amino Acids

83.88

Weight (kDa)

9.19

Isoelectric Point (pI)

44.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 86 - 447 2.4e-110 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2180
Acc36I ACCTGC 2 cut(s) 1444, 2180
AccB1I GGYRCC 1 cut(s) 984
AccB7I CCANNNNNTGG 1 cut(s) 41
AccBSI CCGCTC 1 cut(s) 582
AccII CGCG 1 cut(s) 186
AciI CCGC 2 cut(s) 582, 1145
AclI AACGTT 1 cut(s) 1716
AcoI YGGCCR 2 cut(s) 152, 543
AcsI RAATTY 3 cut(s) 569, 940, 1689
AcvI CACGTG 1 cut(s) 243
AcyI GRCGYC 2 cut(s) 181, 985
AfaI GTAC 1 cut(s) 1572
AfiI CCNNNNNNNGG 3 cut(s) 41, 1631, 1827
AflIII ACRYGT 1 cut(s) 2163
AgeI ACCGGT 1 cut(s) 38
AjnI CCWGG 4 cut(s) 626, 1057, 1241, 1450
AloI GAACNNNNNNTCC 2 cut(s) 1058, 1090
Alw21I GWGCWC 3 cut(s) 192, 600, 1319
Alw26I GTCTC 5 cut(s) 338, 423, 1361, 1647, 1933
AoxI GGCC 4 cut(s) 152, 543, 863, 1839
ApoI RAATTY 3 cut(s) 569, 940, 1689
AsiGI ACCGGT 1 cut(s) 38
Asp700I GAANNNNTTC 1 cut(s) 569
AspA2I CCTAGG 1 cut(s) 1376
AspLEI GCGC 3 cut(s) 551, 715, 987
AspS9I GGNCC 1 cut(s) 1055
AsuC2I CCSGG 1 cut(s) 1605
AsuNHI GCTAGC 1 cut(s) 1925
AvaII GGWCC 1 cut(s) 1055
AvrII CCTAGG 1 cut(s) 1376
AxyI CCTNAGG 1 cut(s) 1442
BalI TGGCCA 2 cut(s) 154, 545
BanI GGYRCC 1 cut(s) 984
BanII GRGCYC 1 cut(s) 214
BbrPI CACGTG 1 cut(s) 243
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 3 cut(s) 192, 600, 1319
BbvCI CCTCAGC 1 cut(s) 1476
BceAI ACGGC 1 cut(s) 658
BciT130I CCWGG 4 cut(s) 628, 1059, 1243, 1452
BclI TGATCA 1 cut(s) 1174
BcnI CCSGG 1 cut(s) 1605
BcoDI GTCTC 5 cut(s) 338, 423, 1361, 1647, 1933
BfoI RGCGCY 1 cut(s) 988
BfuAI ACCTGC 2 cut(s) 1444, 2180
BlnI CCTAGG 1 cut(s) 1376
BlpI GCTNAGC 1 cut(s) 891
Bme1390I CCNGG 5 cut(s) 628, 1059, 1243, 1452, 1605
Bme18I GGWCC 1 cut(s) 1055
BmgT120I GGNCC 1 cut(s) 1055
BmiI GGNNCC 1 cut(s) 986
BmrFI CCNGG 5 cut(s) 628, 1059, 1243, 1452, 1605
BmsI GCATC 3 cut(s) 1371, 1456, 2087
BmtI GCTAGC 1 cut(s) 1929
BpiI GAAGAC 1 cut(s) 24
BpmI CTGGAG 1 cut(s) 987
Bpu10I CCTNAGC 2 cut(s) 1476, 2205
Bpu1102I GCTNAGC 1 cut(s) 891
BpuEI CTTGAG 2 cut(s) 506, 1117
BpuMI CCSGG 1 cut(s) 1605
BsaAI YACGTR 1 cut(s) 243
BsaHI GRCGYC 2 cut(s) 181, 985
BsaI GGTCTC 2 cut(s) 338, 1361
BsaJI CCNNGG 6 cut(s) 172, 365, 640, 1376, 1821, 2088
BsaWI WCCGGW 1 cut(s) 38
BsaXI ACNNNNNCTCC 2 cut(s) 2178, 2208
Bsc4I CCNNNNNNNGG 3 cut(s) 41, 1631, 1827
Bse118I RCCGGY 3 cut(s) 38, 254, 721
Bse1I ACTGG 3 cut(s) 789, 1510, 2185
Bse21I CCTNAGG 1 cut(s) 1442
Bse3DI GCAATG 4 cut(s) 678, 996, 1194, 1921
BseBI CCWGG 4 cut(s) 628, 1059, 1243, 1452
BseDI CCNNGG 6 cut(s) 172, 365, 640, 1376, 1821, 2088
BseGI GGATG 8 cut(s) 182, 400, 567, 919, 1072, 1276, 1386, 1447
BseLI CCNNNNNNNGG 3 cut(s) 41, 1631, 1827
BseMI GCAATG 4 cut(s) 678, 996, 1194, 1921
BseMII CTCAG 5 cut(s) 882, 1293, 1401, 1456, 1467
BseNI ACTGG 3 cut(s) 789, 1510, 2185
BseRI GAGGAG 1 cut(s) 1085
Bsh1236I CGCG 1 cut(s) 186
BshFI GGCC 4 cut(s) 154, 545, 865, 1841
BshNI GGYRCC 1 cut(s) 984
BshTI ACCGGT 1 cut(s) 38
BsiHKAI GWGCWC 3 cut(s) 192, 600, 1319
BsiSI CCGG 5 cut(s) 39, 255, 722, 1459, 1605
BslFI GGGAC 1 cut(s) 547
BslI CCNNNNNNNGG 3 cut(s) 41, 1631, 1827
BsmAI GTCTC 5 cut(s) 338, 423, 1361, 1647, 1933
BsmFI GGGAC 1 cut(s) 547
BsmI GAATGC 1 cut(s) 702
BsnI GGCC 4 cut(s) 154, 545, 865, 1841
Bso31I GGTCTC 2 cut(s) 338, 1361
Bsp1286I GDGCHC 4 cut(s) 192, 214, 600, 1319
Bsp143I GATC 3 cut(s) 1174, 1249, 1415
Bsp1720I GCTNAGC 1 cut(s) 891
Bsp19I CCATGG 1 cut(s) 365
Bsp68I TCGCGA 1 cut(s) 186
BspACI CCGC 2 cut(s) 582, 1145
BspANI GGCC 4 cut(s) 154, 545, 865, 1841
BspCNI CTCAG 5 cut(s) 883, 1294, 1402, 1455, 1468
BspFNI CGCG 1 cut(s) 186
BspHI TCATGA 2 cut(s) 24, 573
BspLI GGNNCC 1 cut(s) 986
BspMI ACCTGC 2 cut(s) 1444, 2180
BspOI GCTAGC 1 cut(s) 1929
BspQI GCTCTTC 1 cut(s) 572
BspT107I GGYRCC 1 cut(s) 984
BspTNI GGTCTC 2 cut(s) 338, 1361
BsrBI CCGCTC 1 cut(s) 582
BsrDI GCAATG 4 cut(s) 678, 996, 1194, 1921
BsrFI RCCGGY 3 cut(s) 38, 254, 721
BsrI ACTGG 3 cut(s) 789, 1510, 2185
BssAI RCCGGY 3 cut(s) 38, 254, 721
BssECI CCNNGG 6 cut(s) 172, 365, 640, 1376, 1821, 2088
BssMI GATC 3 cut(s) 1174, 1249, 1415
BssNI GRCGYC 2 cut(s) 181, 985
BssT1I CCWWGG 3 cut(s) 365, 1376, 1821
Bst2UI CCWGG 4 cut(s) 628, 1059, 1243, 1452
Bst4CI ACNGT 5 cut(s) 518, 1013, 1031, 1348, 2089
Bst6I CTCTTC 4 cut(s) 3, 471, 572, 2026
BstACI GRCGYC 2 cut(s) 181, 985
BstBAI YACGTR 1 cut(s) 243
BstC8I GCNNGC 6 cut(s) 188, 256, 547, 717, 1927, 2144
BstDSI CCRYGG 4 cut(s) 172, 365, 640, 2088
BstENI CCTNNNNNAGG 1 cut(s) 1629
BstF5I GGATG 8 cut(s) 182, 400, 567, 919, 1072, 1276, 1386, 1447
BstFNI CGCG 1 cut(s) 186
BstH2I RGCGCY 1 cut(s) 988
BstHHI GCGC 3 cut(s) 551, 715, 987
BstKTI GATC 3 cut(s) 1177, 1252, 1418
BstMAI GTCTC 5 cut(s) 338, 423, 1361, 1647, 1933
BstMBI GATC 3 cut(s) 1174, 1249, 1415
BstMWI GCNNNNNNNGC 4 cut(s) 187, 731, 785, 1381
BstNI CCWGG 4 cut(s) 628, 1059, 1243, 1452
BstNSI RCATGY 1 cut(s) 2167
BstSCI CCNGG 5 cut(s) 626, 1057, 1241, 1450, 1603
BstUI CGCG 1 cut(s) 186
BstV2I GAAGAC 1 cut(s) 24
BstXI CCANNNNNNTGG 1 cut(s) 150
Bsu36I CCTNAGG 1 cut(s) 1442
BsuRI GGCC 4 cut(s) 154, 545, 865, 1841
BtgI CCRYGG 4 cut(s) 172, 365, 640, 2088
BtsCI GGATG 8 cut(s) 182, 400, 567, 919, 1072, 1276, 1386, 1447
BtsIMutI CAGTG 2 cut(s) 523, 2178
BtuMI TCGCGA 1 cut(s) 186
BveI ACCTGC 2 cut(s) 1444, 2180
Cac8I GCNNGC 6 cut(s) 188, 256, 547, 717, 1927, 2144
CciI TCATGA 2 cut(s) 24, 573
CfoI GCGC 3 cut(s) 551, 715, 987
Cfr10I RCCGGY 3 cut(s) 38, 254, 721
Cfr13I GGNCC 1 cut(s) 1055
CseI GACGC 1 cut(s) 170
Csp6I GTAC 1 cut(s) 1571
CspAI ACCGGT 1 cut(s) 38
CspCI CAANNNNNGTGG 2 cut(s) 224, 259
CviAII CATG 9 cut(s) 25, 366, 574, 840, 979, 1255, 1327, 1897, 2164
CviQI GTAC 1 cut(s) 1571
DinI GGCGCC 1 cut(s) 986
DpnI GATC 3 cut(s) 1176, 1251, 1417
DpnII GATC 3 cut(s) 1174, 1249, 1415
DraI TTTAAA 1 cut(s) 1978
EaeI YGGCCR 2 cut(s) 152, 543
Eam1104I CTCTTC 4 cut(s) 3, 471, 572, 2026
EarI CTCTTC 4 cut(s) 3, 471, 572, 2026
Eco130I CCWWGG 3 cut(s) 365, 1376, 1821
Eco24I GRGCYC 1 cut(s) 214
Eco31I GGTCTC 2 cut(s) 338, 1361
Eco32I GATATC 1 cut(s) 1622
Eco47I GGWCC 1 cut(s) 1055
Eco72I CACGTG 1 cut(s) 243
Eco81I CCTNAGG 1 cut(s) 1442
EcoNI CCTNNNNNAGG 1 cut(s) 1629
EcoRII CCWGG 4 cut(s) 626, 1057, 1241, 1450
EcoRV GATATC 1 cut(s) 1622
EcoT14I CCWWGG 3 cut(s) 365, 1376, 1821
EcoT38I GRGCYC 1 cut(s) 214
EgeI GGCGCC 1 cut(s) 986
EheI GGCGCC 1 cut(s) 986
ErhI CCWWGG 3 cut(s) 365, 1376, 1821
FaeI CATG 9 cut(s) 28, 369, 577, 843, 982, 1258, 1330, 1900, 2167
FalI AAGNNNNNCTT 2 cut(s) 468, 500
FaqI GGGAC 1 cut(s) 547
FatI CATG 9 cut(s) 24, 365, 573, 839, 978, 1254, 1326, 1896, 2163
FauI CCCGC 1 cut(s) 575
FbaI TGATCA 1 cut(s) 1174
FokI GGATG 8 cut(s) 189, 407, 574, 926, 1079, 1283, 1393, 1434
FriOI GRGCYC 1 cut(s) 214
GlaI GCGC 3 cut(s) 550, 714, 986
GsuI CTGGAG 1 cut(s) 987
HaeII RGCGCY 1 cut(s) 988
HaeIII GGCC 4 cut(s) 154, 545, 865, 1841
HapII CCGG 5 cut(s) 39, 255, 722, 1459, 1605
HgaI GACGC 1 cut(s) 170
HhaI GCGC 3 cut(s) 551, 715, 987
Hin1I GRCGYC 2 cut(s) 181, 985
Hin1II CATG 9 cut(s) 28, 369, 577, 843, 982, 1258, 1330, 1900, 2167
Hin6I GCGC 3 cut(s) 549, 713, 985
HinP1I GCGC 3 cut(s) 549, 713, 985
HindIII AAGCTT 3 cut(s) 1016, 1972, 2144
HpaII CCGG 5 cut(s) 39, 255, 722, 1459, 1605
Hpy166II GTNNAC 6 cut(s) 44, 165, 590, 661, 1433, 1503
Hpy188I TCNGA 9 cut(s) 708, 938, 1036, 1303, 1786, 1818, 1951, 1987, 2122
Hpy188III TCNNGA 9 cut(s) 25, 185, 574, 650, 929, 1178, 1685, 1886, 2069
Hpy8I GTNNAC 6 cut(s) 44, 165, 590, 661, 1433, 1503
Hpy99I CGWCG 2 cut(s) 186, 1681
HpyAV CCTTC 6 cut(s) 99, 364, 1151, 1252, 1530, 2090
HpyCH4III ACNGT 5 cut(s) 518, 1013, 1031, 1348, 2089
HpyCH4IV ACGT 2 cut(s) 242, 1716
HpyCH4V TGCA 6 cut(s) 202, 326, 683, 719, 1547, 1877
HpyF10VI GCNNNNNNNGC 4 cut(s) 187, 731, 785, 1381
HpySE526I ACGT 2 cut(s) 242, 1716
Hsp92I GRCGYC 2 cut(s) 181, 985
Hsp92II CATG 9 cut(s) 28, 369, 577, 843, 982, 1258, 1330, 1900, 2167
HspAI GCGC 3 cut(s) 549, 713, 985
KasI GGCGCC 1 cut(s) 984
KroI GCCGGC 1 cut(s) 254
KroNI GCCGGC 1 cut(s) 256
Ksp22I TGATCA 1 cut(s) 1174
Kzo9I GATC 3 cut(s) 1174, 1249, 1415
LguI GCTCTTC 1 cut(s) 572
LmnI GCTCC 1 cut(s) 2186
LweI GCATC 3 cut(s) 1371, 1456, 2087
MaeII ACGT 2 cut(s) 242, 1716
MaeIII GTNAC 4 cut(s) 810, 1025, 1102, 2039
MalI GATC 3 cut(s) 1176, 1251, 1417
MbiI CCGCTC 1 cut(s) 582
MboI GATC 3 cut(s) 1174, 1249, 1415
MfeI CAATTG 1 cut(s) 1746
MhlI GDGCHC 4 cut(s) 192, 214, 600, 1319
MlsI TGGCCA 2 cut(s) 154, 545
MluNI TGGCCA 2 cut(s) 154, 545
Mly113I GGCGCC 1 cut(s) 985
MlyI GAGTC 7 cut(s) 113, 425, 451, 763, 818, 953, 1690
MmeI TCCRAC 3 cut(s) 1096, 1630, 1841
Mox20I TGGCCA 2 cut(s) 154, 545
MroNI GCCGGC 1 cut(s) 254
MroXI GAANNNNTTC 1 cut(s) 569
MscI TGGCCA 2 cut(s) 154, 545
MseI TTAA 7 cut(s) 762, 800, 1266, 1854, 1956, 1977, 2127
MslI CAYNNNNRTG 1 cut(s) 741
Msp20I TGGCCA 2 cut(s) 154, 545
MspI CCGG 5 cut(s) 39, 255, 722, 1459, 1605
MspR9I CCNGG 5 cut(s) 628, 1059, 1243, 1452, 1605
MunI CAATTG 1 cut(s) 1746
Mva1269I GAATGC 1 cut(s) 702
MvaI CCWGG 4 cut(s) 628, 1059, 1243, 1452
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 4 cut(s) 187, 731, 785, 1381
NaeI GCCGGC 1 cut(s) 256
NarI GGCGCC 1 cut(s) 985
NciI CCSGG 1 cut(s) 1605
NcoI CCATGG 1 cut(s) 365
NdeII GATC 3 cut(s) 1174, 1249, 1415
NgoMIV GCCGGC 1 cut(s) 254
NheI GCTAGC 1 cut(s) 1925
NlaIII CATG 9 cut(s) 28, 369, 577, 843, 982, 1258, 1330, 1900, 2167
NlaIV GGNNCC 1 cut(s) 986
NmuCI GTSAC 3 cut(s) 810, 1102, 2039
NruI TCGCGA 1 cut(s) 186
NspI RCATGY 1 cut(s) 2167
PagI TCATGA 2 cut(s) 24, 573
PaqCI CACCTGC 1 cut(s) 2180
PciI ACATGT 1 cut(s) 2163
PciSI GCTCTTC 1 cut(s) 572
PcsI WCGNNNNNNNCGW 1 cut(s) 1132
PctI GAATGC 1 cut(s) 702
PdiI GCCGGC 1 cut(s) 256
PdmI GAANNNNTTC 1 cut(s) 569
PfeI GAWTC 4 cut(s) 653, 1589, 1742, 1982
PflMI CCANNNNNTGG 1 cut(s) 41
PfoI TCCNGGA 2 cut(s) 1241, 1603
PinAI ACCGGT 1 cut(s) 38
PleI GAGTC 7 cut(s) 112, 425, 450, 762, 817, 953, 1689
PluTI GGCGCC 1 cut(s) 988
PmaCI CACGTG 1 cut(s) 243
PmlI CACGTG 1 cut(s) 243
PpsI GAGTC 7 cut(s) 112, 425, 450, 762, 817, 953, 1689
Ppu21I YACGTR 1 cut(s) 243
PscI ACATGT 1 cut(s) 2163
Psp1406I AACGTT 1 cut(s) 1716
Psp6I CCWGG 4 cut(s) 626, 1057, 1241, 1450
PspCI CACGTG 1 cut(s) 243
PspGI CCWGG 4 cut(s) 626, 1057, 1241, 1450
PspN4I GGNNCC 1 cut(s) 986
PspPI GGNCC 1 cut(s) 1055
RruI TCGCGA 1 cut(s) 186
RsaI GTAC 1 cut(s) 1572
RsaNI GTAC 1 cut(s) 1571
RseI CAYNNNNRTG 1 cut(s) 741
SapI GCTCTTC 1 cut(s) 572
SaqAI TTAA 7 cut(s) 762, 800, 1266, 1854, 1956, 1977, 2127
Sau3AI GATC 3 cut(s) 1174, 1249, 1415
Sau96I GGNCC 1 cut(s) 1055
SchI GAGTC 7 cut(s) 113, 425, 451, 763, 818, 953, 1690
ScrFI CCNGG 5 cut(s) 628, 1059, 1243, 1452, 1605
SduI GDGCHC 4 cut(s) 192, 214, 600, 1319
SfaNI GCATC 3 cut(s) 1371, 1456, 2087
SfoI GGCGCC 1 cut(s) 986
SinI GGWCC 1 cut(s) 1055
SmiMI CAYNNNNRTG 1 cut(s) 741
SmlI CTYRAG 2 cut(s) 485, 1096
SmoI CTYRAG 2 cut(s) 485, 1096
SsiI CCGC 2 cut(s) 582, 1145
SspDI GGCGCC 1 cut(s) 984
SspI AATATT 2 cut(s) 2000, 2020
StyD4I CCNGG 5 cut(s) 626, 1057, 1241, 1450, 1603
StyI CCWWGG 3 cut(s) 365, 1376, 1821
TaaI ACNGT 5 cut(s) 518, 1013, 1031, 1348, 2089
TaiI ACGT 2 cut(s) 245, 1719
TaqI TCGA 3 cut(s) 102, 281, 1126
TatI WGTACW 1 cut(s) 1570
TfiI GAWTC 4 cut(s) 653, 1589, 1742, 1982
Tru1I TTAA 7 cut(s) 762, 800, 1266, 1854, 1956, 1977, 2127
Tru9I TTAA 7 cut(s) 762, 800, 1266, 1854, 1956, 1977, 2127
TscAI CASTG 2 cut(s) 523, 2185
TseFI GTSAC 3 cut(s) 810, 1102, 2039
Tsp45I GTSAC 3 cut(s) 810, 1102, 2039
TspGWI ACGGA 2 cut(s) 161, 1176
TspRI CASTG 2 cut(s) 523, 2185
Van91I CCANNNNNTGG 1 cut(s) 41
VpaK11BI GGWCC 1 cut(s) 1055
XagI CCTNNNNNAGG 1 cut(s) 1629
XapI RAATTY 3 cut(s) 569, 940, 1689
XbaI TCTAGA 1 cut(s) 1885
XceI RCATGY 1 cut(s) 2167
XcmI CCANNNNNNNNNTGG 1 cut(s) 385
XmaJI CCTAGG 1 cut(s) 1376
XmnI GAANNNNTTC 1 cut(s) 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.