Rorug06G0252800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0013484
Physical Location & Seq
Forward (+)
39922209 .. 39925967
3759 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0252800.1

Sequence Viewer

Length: 1800 bp
ATGGACGTCCGAAGGCGATCGGCGATGGAGCAGCCCACTAAGGGAGCTGGCGGCAGGCCGGTGAAAATGAAAGTGAAGATGGATCATCACCACCATCAAAACGACGCCGCTAAGGCCTCCGACGCGTTGCCGCTGCCTATGTACCTGACAAATGCGGTCTTCTTCACTCTCTTCTTCTCCGTCGTCTACTTCCTGCTCACTCGCTGGCGCGAGAAGATCCGCACCTCCACTCCTCTCCACATGGTCAATCTATCTGAGATTGTAGCCATCCTTGCCTTCGTAGCCTCCTTCATCTACCTCCTCGGCTTCTTCGGCATCGATTTCGTCCAGTCCTTGATTCTCCGGCCCAGTCACGACGTTTGGGCCGCCGAGGATGACGAGGAGGACATTATTCTCAAGGAGGATGCCCGCAAAGTGCCTTGTGGCCAGGCCCTTGATTGTTCAATTCCCAAAATTGCTCCAATCGCTCCACTGAAACCTGCTCTTAAAGCTGCACTGAAGGTGTTTGATAAAGAGGTGGTGAGCGAGACCTCGCCGCCAACCGCAGAAGACGAAGAGATCATCAACGCTGTGGTGGCTGGAACCATTCCCTCGTACTCACTCGAGACAAAGCTCGGCGATTGCAAGAGGGCAGCTTCTATCAGGCGTGAGGCTTTGCAGAGGGTCACAGGCAAGTCTCTTGAGGGTTTGCCATTGGAGGGATTCGATTACGAGTCAATTTTGGGTCAATGCTGTGAGATGCCAGTCGGGTATGTCACCATCCCTGTTGGAATTGCTGGCCCTGTTATGCTCGATGGAAGAGAGTTCTCAATCCCCATGGCCACAACTGAAGGTTGCTTGGTGGCCAGTACCAACCGCGGTTGCAAAGCTATCAACTTGTCCGGTGGAGCTGCCAGTGTGCTGTTGAAAGATGGAATGACCAGAGCACCTGTTGTCAGATTCAACTCGGCTAAGAGAGCTGCTGAGTTGAAGTTCTTCATGGAAGACCCTGAGAATGCCGACACCATAGCCACCCTTTTCAACAAATCAAGCAGATTTGGTAGACTTCAATCAGTTAAGTGTGCCGTTGCTGGGAAGAACCTGTACATGAGGTTCTGCTGCAGCACTGGTGATGCTATGGGGATGAACATGGTCTCTAAAGGTGTTCAAAACGTTCTCGATTTCCTCCAGAGTGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAGAAGCCTGCTGCTGTCAACTGGATCGAAGGCCGTGGCAAGTCGGTGGTCTGTGAGGCTGTGATCAAGGGAGACATAGTGACGAAGGTTTTGAAAACCAAGGTGGCGGCTTTGGTGGAGCTCAACATGCTCAAGAACCTTACTGGTTCCGCTATTGCTGGTGCTCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCGGCTGTGTACCTTGCCACTGGTCAAGACCCTGCTCAGAACATTGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGGCAAGGATCTTCACGTCTCTGTCACCATGCCTTCCATTGAGGTTGGTACCGTAGGAGGAGGGACCCAACTTGCATCCCAGTCAGCATGTTTGAACTTGCTTGGAGTGAAGGGTGCTAACAGAGAGGCACCAGGAGCGAACGCAAGGCAATTGGCCAGTGTTGTAGCTGCGTCGGTTCTTGCCGGAGAGCTTTCTCTTATGTCTGCTATCGCTGCTGGTCAGCTCGTTAGGAGCCACATGAAGTACAACAGATCCAGCAAAGATGTCTCAACAATGGTTTCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

599

Amino Acids

64.05

Weight (kDa)

7.5

Isoelectric Point (pI)

39.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HMG-CoA_red PF00368 212 - 588 3e-145 Hydroxymethylglutaryl-coenzyme A reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013484)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G44770 AT1G44770
fragaria_vesca FvH4_2g26730
malus_domestica MD08G1165700.v1.1 MD15G1351500.v1.1
pyrus_communis pycom12654g00110 pycom15g31390
rosa_chinensis RchiOBHm_Chr6g0295611
rosa_laevigata RLG00000011785
rosa_multiflora Rmu_sc0013988.1_g000004
rosa_roxburghii Rroxscaffold_7G00172320
rosa_rugosa Rorug06G0252700 Rorug06G0252800
rosa_samantha Rh6AG365800 Rh6BG373900 Rh6CG380200 Rh6DG366800
rosa_wichuraiana Rw6G031920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1190
AatII GACGTC 1 cut(s) 9
Acc36I ACCTGC 1 cut(s) 487
Acc65I GGTACC 1 cut(s) 1559
AccB1I GGYRCC 2 cut(s) 1559, 1639
AccI GTMKAC 2 cut(s) 186, 1042
AccII CGCG 3 cut(s) 125, 210, 858
AclI AACGTT 1 cut(s) 1152
AclWI GGATC 5 cut(s) 90, 211, 1256, 1527, 1758
AcoI YGGCCR 4 cut(s) 424, 819, 843, 1665
AcuI CTGAAG 2 cut(s) 518, 849
AcyI GRCGYC 2 cut(s) 6, 105
AfaI GTAC 7 cut(s) 143, 596, 850, 1085, 1436, 1561, 1757
AfiI CCNNNNNNNGG 4 cut(s) 41, 698, 1071, 1186
AflIII ACRYGT 1 cut(s) 123
AjiI CACGTC 1 cut(s) 1528
AjnI CCWGG 2 cut(s) 426, 1642
Alw21I GWGCWC 3 cut(s) 928, 1347, 1390
Alw26I GTCTC 7 cut(s) 521, 599, 681, 1138, 1290, 1534, 1783
AlwI GGATC 5 cut(s) 90, 211, 1256, 1527, 1758
Ama87I CYCGRG 1 cut(s) 602
ArsI GACNNNNNNTTYG 2 cut(s) 1297, 1329
Asp700I GAANNNNTTC 1 cut(s) 974
Asp718I GGTACC 1 cut(s) 1559
AspLEI GCGC 1 cut(s) 210
AspS9I GGNCC 5 cut(s) 345, 363, 430, 779, 1575
AsuHPI GGTGA 7 cut(s) 73, 80, 532, 748, 1121, 1480, 1528
AvaI CYCGRG 1 cut(s) 602
AvaII GGWCC 1 cut(s) 1575
BalI TGGCCA 4 cut(s) 426, 821, 845, 1667
BanI GGYRCC 2 cut(s) 1559, 1639
BanII GRGCYC 1 cut(s) 1347
BarI GAAGNNNNNNTAC 2 cut(s) 1067, 1099
BbsI GAAGAC 3 cut(s) 151, 555, 990
Bbv12I GWGCWC 3 cut(s) 928, 1347, 1390
BceAI ACGGC 2 cut(s) 1049, 1242
BcgI CGANNNNNNTGC 2 cut(s) 304, 338
BciT130I CCWGG 2 cut(s) 428, 1644
BclI TGATCA 1 cut(s) 1287
BcoDI GTCTC 7 cut(s) 521, 599, 681, 1138, 1290, 1534, 1783
BfmI CTRYAG 1 cut(s) 1099
BfuAI ACCTGC 1 cut(s) 487
BglI GCCNNNNNGGC 1 cut(s) 113
Bme1390I CCNGG 2 cut(s) 428, 1644
Bme18I GGWCC 1 cut(s) 1575
BmeT110I CYCGRG 1 cut(s) 602
BmgBI CACGTC 1 cut(s) 1528
BmgT120I GGNCC 5 cut(s) 345, 363, 430, 779, 1575
BmiI GGNNCC 7 cut(s) 583, 1372, 1561, 1576, 1577, 1641, 1745
BmrFI CCNGG 2 cut(s) 428, 1644
BmrI ACTGGG 2 cut(s) 342, 1585
BmsI GCATC 5 cut(s) 324, 394, 729, 1102, 1595
BmuI ACTGGG 2 cut(s) 342, 1585
BpiI GAAGAC 3 cut(s) 151, 555, 990
BpmI CTGGAG 1 cut(s) 1151
Bpu10I CCTNAGC 1 cut(s) 111
BpuEI CTTGAG 3 cut(s) 380, 701, 1340
Bsa29I ATCGAT 1 cut(s) 318
BsaHI GRCGYC 2 cut(s) 6, 105
BsaI GGTCTC 2 cut(s) 521, 1138
BsaJI CCNNGG 6 cut(s) 301, 369, 816, 856, 1258, 1323
BsaWI WCCGGW 1 cut(s) 881
BsaXI ACNNNNNCTCC 4 cut(s) 214, 244, 1287, 1317
Bsc4I CCNNNNNNNGG 4 cut(s) 41, 698, 1071, 1186
Bse118I RCCGGY 1 cut(s) 58
BseBI CCWGG 2 cut(s) 428, 1644
BseCI ATCGAT 1 cut(s) 318
BseDI CCNNGG 6 cut(s) 301, 369, 816, 856, 1258, 1323
BseGI GGATG 7 cut(s) 267, 379, 409, 759, 1128, 1195, 1586
BseLI CCNNNNNNNGG 4 cut(s) 41, 698, 1071, 1186
BseMII CTCAG 5 cut(s) 246, 954, 981, 1233, 1475
BseRI GAGGAG 4 cut(s) 222, 290, 395, 1584
BseYI CCCAGC 1 cut(s) 1070
BsgI GTGCAG 1 cut(s) 477
Bsh1236I CGCG 3 cut(s) 125, 210, 858
Bsh1285I CGRYCG 1 cut(s) 20
BshNI GGYRCC 2 cut(s) 1559, 1639
BshVI ATCGAT 1 cut(s) 318
BsiEI CGRYCG 1 cut(s) 20
BsiHKAI GWGCWC 3 cut(s) 928, 1347, 1390
BsiHKCI CYCGRG 1 cut(s) 602
BsiSI CCGG 4 cut(s) 59, 343, 882, 1695
BslFI GGGAC 1 cut(s) 1588
BslI CCNNNNNNNGG 4 cut(s) 41, 698, 1071, 1186
BsmAI GTCTC 7 cut(s) 521, 599, 681, 1138, 1290, 1534, 1783
BsmBI CGTCTC 1 cut(s) 1534
BsmFI GGGAC 1 cut(s) 1588
BsmI GAATGC 1 cut(s) 1000
Bso31I GGTCTC 2 cut(s) 521, 1138
BsoBI CYCGRG 1 cut(s) 602
Bsp1286I GDGCHC 3 cut(s) 928, 1347, 1390
Bsp1407I TGTACA 1 cut(s) 1083
Bsp143I GATC 8 cut(s) 17, 82, 216, 558, 1248, 1287, 1519, 1763
Bsp19I CCATGG 1 cut(s) 816
BspCNI CTCAG 5 cut(s) 247, 955, 982, 1232, 1474
BspDI ATCGAT 1 cut(s) 318
BspFNI CGCG 3 cut(s) 125, 210, 858
BspLI GGNNCC 7 cut(s) 583, 1372, 1561, 1576, 1577, 1641, 1745
BspMAI CTGCAG 1 cut(s) 1103
BspMI ACCTGC 1 cut(s) 487
BspPI GGATC 5 cut(s) 90, 211, 1256, 1527, 1758
BspT107I GGYRCC 2 cut(s) 1559, 1639
BspTNI GGTCTC 2 cut(s) 521, 1138
BsrFI RCCGGY 1 cut(s) 58
BsrGI TGTACA 1 cut(s) 1083
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 6 cut(s) 301, 369, 816, 856, 1258, 1323
BssMI GATC 8 cut(s) 17, 82, 216, 558, 1248, 1287, 1519, 1763
BssNI GRCGYC 2 cut(s) 6, 105
BssT1I CCWWGG 2 cut(s) 816, 1323
Bst2UI CCWGG 2 cut(s) 428, 1644
Bst4CI ACNGT 2 cut(s) 1484, 1564
Bst6I CTCTTC 3 cut(s) 176, 549, 793
BstACI GRCGYC 2 cut(s) 6, 105
BstAUI TGTACA 1 cut(s) 1083
BstC8I GCNNGC 6 cut(s) 49, 56, 206, 409, 778, 1233
BstDEI CTNAG 8 cut(s) 39, 111, 255, 951, 963, 990, 1219, 1461
BstDSI CCRYGG 3 cut(s) 816, 856, 1258
BstF5I GGATG 7 cut(s) 267, 379, 409, 759, 1128, 1195, 1586
BstFNI CGCG 3 cut(s) 125, 210, 858
BstHHI GCGC 1 cut(s) 210
BstKTI GATC 8 cut(s) 20, 85, 219, 561, 1251, 1290, 1522, 1766
BstMAI GTCTC 7 cut(s) 521, 599, 681, 1138, 1290, 1534, 1783
BstMBI GATC 8 cut(s) 17, 82, 216, 558, 1248, 1287, 1519, 1763
BstMCI CGRYCG 1 cut(s) 20
BstNI CCWGG 2 cut(s) 428, 1644
BstNSI RCATGY 3 cut(s) 1354, 1412, 1602
BstSCI CCNGG 2 cut(s) 426, 1642
BstSFI CTRYAG 1 cut(s) 1099
BstUI CGCG 3 cut(s) 125, 210, 858
BstV2I GAAGAC 3 cut(s) 151, 555, 990
BstX2I RGATCY 3 cut(s) 216, 1519, 1763
BstYI RGATCY 3 cut(s) 216, 1519, 1763
Bsu15I ATCGAT 1 cut(s) 318
BsuTUI ATCGAT 1 cut(s) 318
BtgI CCRYGG 3 cut(s) 816, 856, 1258
BtgZI GCGATG 1 cut(s) 38
BtrI CACGTC 1 cut(s) 1528
BtsCI GGATG 7 cut(s) 267, 379, 409, 759, 1128, 1195, 1586
BtsIMutI CAGTG 7 cut(s) 470, 494, 901, 1104, 1443, 1480, 1675
BveI ACCTGC 1 cut(s) 487
Cac8I GCNNGC 6 cut(s) 49, 56, 206, 409, 778, 1233
CfoI GCGC 1 cut(s) 210
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 5 cut(s) 345, 363, 430, 779, 1575
Cfr42I CCGCGG 1 cut(s) 859
ClaI ATCGAT 1 cut(s) 318
CseI GACGC 3 cut(s) 113, 131, 1671
Csp6I GTAC 7 cut(s) 142, 595, 849, 1084, 1435, 1560, 1756
CviQI GTAC 7 cut(s) 142, 595, 849, 1084, 1435, 1560, 1756
DdeI CTNAG 8 cut(s) 39, 111, 255, 951, 963, 990, 1219, 1461
DpnI GATC 8 cut(s) 19, 84, 218, 560, 1250, 1289, 1521, 1765
DpnII GATC 8 cut(s) 17, 82, 216, 558, 1248, 1287, 1519, 1763
DrdI GACNNNNNNGTC 1 cut(s) 1190
DseDI GACNNNNNNGTC 1 cut(s) 1190
EaeI YGGCCR 4 cut(s) 424, 819, 843, 1665
Eam1104I CTCTTC 3 cut(s) 176, 549, 793
EarI CTCTTC 3 cut(s) 176, 549, 793
Ecl136II GAGCTC 1 cut(s) 1345
Eco130I CCWWGG 2 cut(s) 816, 1323
Eco147I AGGCCT 1 cut(s) 116
Eco24I GRGCYC 1 cut(s) 1347
Eco31I GGTCTC 2 cut(s) 521, 1138
Eco47I GGWCC 1 cut(s) 1575
Eco53kI GAGCTC 1 cut(s) 1345
Eco57I CTGAAG 2 cut(s) 518, 849
Eco88I CYCGRG 1 cut(s) 602
EcoICRI GAGCTC 1 cut(s) 1345
EcoO109I RGGNCCY 2 cut(s) 430, 1575
EcoRII CCWGG 2 cut(s) 426, 1642
EcoT14I CCWWGG 2 cut(s) 816, 1323
EcoT38I GRGCYC 1 cut(s) 1347
ErhI CCWWGG 2 cut(s) 816, 1323
Esp3I CGTCTC 1 cut(s) 1534
FaqI GGGAC 1 cut(s) 1588
FauI CCCGC 1 cut(s) 416
FbaI TGATCA 1 cut(s) 1287
FblI GTMKAC 2 cut(s) 186, 1042
FokI GGATG 7 cut(s) 254, 386, 416, 746, 1135, 1202, 1573
FriOI GRGCYC 1 cut(s) 1347
GlaI GCGC 1 cut(s) 209
GsaI CCCAGC 1 cut(s) 1074
GsuI CTGGAG 1 cut(s) 1151
HapII CCGG 4 cut(s) 59, 343, 882, 1695
HgaI GACGC 3 cut(s) 113, 131, 1671
HhaI GCGC 1 cut(s) 210
Hin1I GRCGYC 2 cut(s) 6, 105
Hin6I GCGC 1 cut(s) 208
HinP1I GCGC 1 cut(s) 208
HincII GTYRAC 1 cut(s) 1243
HindII GTYRAC 1 cut(s) 1243
HinfI GANTC 4 cut(s) 337, 702, 713, 939
HpaII CCGG 4 cut(s) 59, 343, 882, 1695
HphI GGTGA 7 cut(s) 73, 80, 532, 748, 1121, 1480, 1528
Hpy166II GTNNAC 4 cut(s) 187, 1043, 1243, 1435
Hpy188I TCNGA 6 cut(s) 11, 121, 256, 938, 1222, 1464
Hpy188III TCNNGA 7 cut(s) 353, 604, 680, 1157, 1168, 1357, 1451
Hpy8I GTNNAC 4 cut(s) 187, 1043, 1243, 1435
Hpy99I CGWCG 5 cut(s) 107, 125, 185, 359, 1687
HpyAV CCTTC 9 cut(s) 6, 286, 298, 493, 824, 1247, 1303, 1554, 1615
HpyCH4III ACNGT 2 cut(s) 1484, 1564
HpyCH4IV ACGT 4 cut(s) 6, 357, 1152, 1527
HpyCH4V TGCA 7 cut(s) 494, 624, 658, 864, 1101, 1406, 1586
HpyF3I CTNAG 8 cut(s) 39, 111, 255, 951, 963, 990, 1219, 1461
HpySE526I ACGT 4 cut(s) 6, 357, 1152, 1527
Hsp92I GRCGYC 2 cut(s) 6, 105
HspAI GCGC 1 cut(s) 208
KflI GGGWCCC 1 cut(s) 1575
KpnI GGTACC 1 cut(s) 1563
Ksp22I TGATCA 1 cut(s) 1287
KspI CCGCGG 1 cut(s) 859
Kzo9I GATC 8 cut(s) 17, 82, 216, 558, 1248, 1287, 1519, 1763
LmnI GCTCC 8 cut(s) 28, 44, 463, 472, 887, 1342, 1646, 1743
LweI GCATC 5 cut(s) 324, 394, 729, 1102, 1595
MaeII ACGT 4 cut(s) 6, 357, 1152, 1527
MaeIII GTNAC 8 cut(s) 350, 664, 754, 1172, 1208, 1303, 1415, 1534
MalI GATC 8 cut(s) 19, 84, 218, 560, 1250, 1289, 1521, 1765
MboI GATC 8 cut(s) 17, 82, 216, 558, 1248, 1287, 1519, 1763
MfeI CAATTG 1 cut(s) 1661
MflI RGATCY 3 cut(s) 216, 1519, 1763
MhlI GDGCHC 3 cut(s) 928, 1347, 1390
MlsI TGGCCA 4 cut(s) 426, 821, 845, 1667
MluCI AATT 5 cut(s) 444, 453, 717, 771, 1661
MluI ACGCGT 1 cut(s) 123
MluNI TGGCCA 4 cut(s) 426, 821, 845, 1667
MlyI GAGTC 1 cut(s) 722
MmeI TCCRAC 2 cut(s) 144, 748
Mox20I TGGCCA 4 cut(s) 426, 821, 845, 1667
MroXI GAANNNNTTC 1 cut(s) 974
MscI TGGCCA 4 cut(s) 426, 821, 845, 1667
MseI TTAA 3 cut(s) 486, 1056, 1798
MslI CAYNNNNRTG 1 cut(s) 1493
Msp20I TGGCCA 4 cut(s) 426, 821, 845, 1667
MspA1I CMGCKG 2 cut(s) 133, 858
MspI CCGG 4 cut(s) 59, 343, 882, 1695
MspR9I CCNGG 2 cut(s) 428, 1644
MunI CAATTG 1 cut(s) 1661
Mva1269I GAATGC 1 cut(s) 1000
MvaI CCWGG 2 cut(s) 428, 1644
MvnI CGCG 3 cut(s) 125, 210, 858
NcoI CCATGG 1 cut(s) 816
NdeII GATC 8 cut(s) 17, 82, 216, 558, 1248, 1287, 1519, 1763
NlaIV GGNNCC 7 cut(s) 583, 1372, 1561, 1576, 1577, 1641, 1745
NmeAIII GCCGAG 4 cut(s) 282, 394, 594, 926
NmuCI GTSAC 6 cut(s) 350, 664, 754, 1172, 1303, 1534
NspI RCATGY 3 cut(s) 1354, 1412, 1602
PaeR7I CTCGAG 1 cut(s) 602
PceI AGGCCT 1 cut(s) 116
PctI GAATGC 1 cut(s) 1000
PdmI GAANNNNTTC 1 cut(s) 974
PfeI GAWTC 3 cut(s) 337, 702, 939
Ple19I CGATCG 1 cut(s) 20
PleI GAGTC 1 cut(s) 721
PpsI GAGTC 1 cut(s) 721
PpuMI RGGWCCY 1 cut(s) 1575
Psp124BI GAGCTC 1 cut(s) 1347
Psp1406I AACGTT 1 cut(s) 1152
Psp5II RGGWCCY 1 cut(s) 1575
Psp6I CCWGG 2 cut(s) 426, 1642
PspFI CCCAGC 1 cut(s) 1070
PspGI CCWGG 2 cut(s) 426, 1642
PspN4I GGNNCC 7 cut(s) 583, 1372, 1561, 1576, 1577, 1641, 1745
PspPI GGNCC 5 cut(s) 345, 363, 430, 779, 1575
PspPPI RGGWCCY 1 cut(s) 1575
PsrI GAACNNNNNNTAC 2 cut(s) 1076, 1108
PstI CTGCAG 1 cut(s) 1103
PsuI RGATCY 3 cut(s) 216, 1519, 1763
PvuI CGATCG 1 cut(s) 20
RsaI GTAC 7 cut(s) 143, 596, 850, 1085, 1436, 1561, 1757
RsaNI GTAC 7 cut(s) 142, 595, 849, 1084, 1435, 1560, 1756
RseI CAYNNNNRTG 1 cut(s) 1493
SacI GAGCTC 1 cut(s) 1347
SacII CCGCGG 1 cut(s) 859
SaqAI TTAA 3 cut(s) 486, 1056, 1798
Sau3AI GATC 8 cut(s) 17, 82, 216, 558, 1248, 1287, 1519, 1763
Sau96I GGNCC 5 cut(s) 345, 363, 430, 779, 1575
SchI GAGTC 1 cut(s) 722
ScrFI CCNGG 2 cut(s) 428, 1644
SduI GDGCHC 3 cut(s) 928, 1347, 1390
SfaNI GCATC 5 cut(s) 324, 394, 729, 1102, 1595
SfcI CTRYAG 1 cut(s) 1099
Sfr274I CTCGAG 1 cut(s) 602
Sfr303I CCGCGG 1 cut(s) 859
SgrBI CCGCGG 1 cut(s) 859
SinI GGWCC 1 cut(s) 1575
SlaI CTCGAG 1 cut(s) 602
SmiMI CAYNNNNRTG 1 cut(s) 1493
SmlI CTYRAG 4 cut(s) 395, 602, 680, 1355
SmoI CTYRAG 4 cut(s) 395, 602, 680, 1355
Sse9I AATT 5 cut(s) 444, 453, 717, 771, 1661
SseBI AGGCCT 1 cut(s) 116
SstI GAGCTC 1 cut(s) 1347
StuI AGGCCT 1 cut(s) 116
StyD4I CCNGG 2 cut(s) 426, 1642
StyI CCWWGG 2 cut(s) 816, 1323
TaaI ACNGT 2 cut(s) 1484, 1564
TaiI ACGT 4 cut(s) 9, 360, 1155, 1530
TaqI TCGA 6 cut(s) 318, 603, 705, 792, 1158, 1251
TasI AATT 5 cut(s) 444, 453, 717, 771, 1661
TatI WGTACW 2 cut(s) 1083, 1755
TauI GCSGC 6 cut(s) 54, 110, 133, 368, 538, 1334
TfiI GAWTC 3 cut(s) 337, 702, 939
Tru1I TTAA 3 cut(s) 486, 1056, 1798
Tru9I TTAA 3 cut(s) 486, 1056, 1798
TscAI CASTG 7 cut(s) 477, 501, 901, 1111, 1450, 1487, 1675
TseFI GTSAC 6 cut(s) 350, 664, 754, 1172, 1303, 1534
Tsp45I GTSAC 6 cut(s) 350, 664, 754, 1172, 1303, 1534
TspDTI ATGAA 5 cut(s) 83, 280, 967, 1139, 1766
TspGWI ACGGA 1 cut(s) 169
TspRI CASTG 7 cut(s) 477, 501, 901, 1111, 1450, 1487, 1675
VpaK11BI GGWCC 1 cut(s) 1575
XceI RCATGY 3 cut(s) 1354, 1412, 1602
XhoI CTCGAG 1 cut(s) 602
XmiI GTMKAC 2 cut(s) 186, 1042
XmnI GAANNNNTTC 1 cut(s) 974
ZraI GACGTC 1 cut(s) 7
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.