Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005627

Physical Location & Seq

Genomic Coordinates Reverse (-)

3677541 .. 3680351

Gene Structure 2811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0051300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

ATGCAAGAGATTATTGTAGCATTTGTTGAACCATTGGCAGAATGGACAGTGAGACCAATTTGTCGACAGTTGAGTTATGTGTTTCACTACGACAGCAACATTGAGCATCTCACCAGAAAGGTTCAGGAACTCCGTGACAAAAGAGAAAGAGTAAACCTGGAGATGAAACCTGCGAGAGAAGCTTCACAGATTATTGGTCCCGGAGTTGATCGCTGGCTCGGTGATGTAGACAAGATCATACAGGAAAAGGAGACGAGTTTCAGTGAAGAAACTGTAGCAGGAAAGACAGCGTGCTGTAATGGGTGGCTTCCAAATTTGAAGTGCCGTCATTATTCTTTGGGAAGGAAAGCTAAGAAGATGACTGATGAGGTGGATAAACTCCTTGCTAATGAACCCAGGACTATAGCGCATCCTGCTCTTCATCCAGAGGTGGAATTCCAACCCACAGAGGACTTATTGCATGAAGGTGGCAGCTCCTCAGAAGCATCAAACCAAGAACAGCTACCTGCGTGTGAAGGAAAAAATATTAATTTTGATTCAAGAAGATCAACCATTAGAGATGTGATGGAAGCTCTCAAGGGGAATCAATTCAATCCGATTATCATATGCGGCATGGGCGGCATTGGGAAGACAACATTGATGGGGCAAATTTTTGAGAAAGCGAAGGAAGAGGGTCTGTTCGATGAGTATACAAAGGCAACCATTAAGGAATCTCTTGACAAAGCTCCTGACGTGATTCAGATTCAAGGTGAACTTGCAGAATATCTAGGCAAGAAGATCCTTGAGGACGAAAAAGAGAGAGGTCCAAGAGCAAGTAAGCTACGTCAAAGATTATCTCAAGGCAACAAGAAGATCCTTGTAATGTTAGACAATGTTTCAACAACAACCTCAGACCTTTTGTGGGAAATAGGGATTCCCCCTAGTTGTAAACTTCTGGTCACATCAAGACAACAAGATCTATTCAAGGACATGGACAGAAGAAAGAACTTCTCAATTGATGGTTTGCCAGATAGAGATGCCTGGAGTCTATTTAAGAAGACAGCAGGAAGTGCCATCGAATCTGATCTCGAGTTGCATGTTGTAGCAGAAAAGGTTCTGGAGGAATGTGCTGGGTTGCCAATTGCAATTTCAACTATTGGAACGGCACTAAAAGGTGAAAGCATTGCAATTTGGAAGAATGCACTAAAGGAACTAGAAAAGGCTAGCCCAGAAAACGTTCCAGGAGTGATAGAACATGTGTATGGTAAAATAAAGTTCAGCTATGAATGTTTACGAAACGAGGAAGCCAAATCATGTTTTTTGCTGTGTTGCATATTTGAAGAAAGCGCTGATATACCAATCGAAGATTTGGTTAGATACGGGCTTGGGCTTGAGCTCTTTAAAGGCATTGATTCAATGGTTGAAGGAAGAAACCGTATGGAAACATTGGTTCAGACACTTAAAAGTCGCTTTTTATTGTTAGACAGTGATGATAAGCCAGAATTTGTGAGAATGCATGATGTGGTGCATGATGTAGCCGTATATATAGCCTCTGAAGAGTTTGTAGAAAAGAAAAATGATGGGGTTGAAAAGAGAATTGTGGTGAGAGACAAAGCAAAAACTGTGAAATTGATGGATTGGCCTGCTAAGAATAGTGTTGCTGAGAAATCTACTTATTGCACTTCACTGAGTATCAAGGGGCTTTGTCGGCTTTTACTGTTGAGAACTCTACCTTTAACTGGAATTCCATTGGAGCCTCCACCCACAATTTTAAGTAGAATGAAAGATATCACGGTTCTAGTAATTGAGAGTATGTCTCCATTGTCACTACTGCCATCACTTCCAGTTTTGAAAAACCTTCATACACTGTGTCTAGATGTGTGCGATCTCAAGTGTGATGTATCTATAATTGGGGAGCTAAGGACACTCGTGATACTCAGTTTGTGTGGATCCGACATTGAACAGTTGCCTGATACATTCAAAAATTTGTCTAATCTGAGATTTCTTGATTTGTCCATATGTAGTGAGCTAAAAATAATACCACCAGGTGTTATATCAAGTTTATCCCGACTAGAAGAATTGTACATGTGGCATAGCTTCGAGGATTGGGTAGTTGAGAAACTAGCCTCGATTGAAACAACCAATTGGATCTCTCAATTGGAGGCTGAGGAGAGAGTTGATGAATCCGAAGAAGTGGACTATCGGGAAACGTCACTGGACACGTGGAAGAGATTCAACAGATTGGCGGTTGAGCAACCAGCAAACATAGGAAACCAGTTTAGAAAAGAGGTTCAAGGTCTGGACAGAGCAAACGATGAGCACACAAGGTGGGCTAACTCCATGGACTGGAAAACTGGGATACTTGCAGAGTTACTTTCCTTGTCCCATTTGACTACTTTAGAAGTTGTTCTGCCACCAGTTAATAAGCTTCTAACCAGTAATCTATTTAACAAGCTCGAAAGATTTAAGATCTTTATAGGATGGAAGCAGCATATACTTTGGGACTTGAAGCATGATGGCAACTACTTGAGAGTTCACGATCTTGACGGAAGCGCTGTTATGGGTGGTGGAATCACTTTGTTGCTAAAGAAAACCAGCATTCTTGAGTTCAGAATGAAGAATTTAACAGAACCTCAAGCTCTGAATGTCTTAGATACGGTCTGTTTTGCAAAGATTAAGTCTCTTACACTTGAGGAGTGTGATGCTGCGGAAAGGGGTTTGGAACCCAGCCTAACTGGGAGGCTCAGCCCCACGCCCGGATTAAATTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0042221 GO:0042493 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

916

Amino Acids

103.44

Weight (kDa)

5.42

Isoelectric Point (pI)

43.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	183 - 349	9e-20	NB-ARC domain
LRR_14	PF23598	600 - 708	2.6e-07	Leucine-rich repeat region
LRR_14	PF23598	630 - 751	1.1e-06	Leucine-rich repeat region
LRR_8	PF13855	635 - 689	7.3e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11660
fragaria_vesca	FvH4_5g01770 FvH4_5g01770 FvH4_5g01770 FvH4_5g01770 FvH4_5g01770 FvH4_5g01770
malus_domestica	MD04G1064700.v1.1
prunus_persica	Prupe.5G093200_v2.0.a1 Prupe.5G093200_v2.0.a1 Prupe.5G093200_v2.0.a1 Prupe.5G093200_v2.0.a1 Prupe.5G093200_v2.0.a1
pyrus_communis	pycom04g05850 pycom17g23290
rosa_chinensis	RchiOBHm_Chr7g0198941
rosa_laevigata	RLG00000003831
rosa_multiflora	Rmu_sc0006266.1_g000015 Rmu_sc0042306.1_g000001
rosa_roxburghii	Rroxscaffold_3G00257300
rosa_rugosa	Rorug07G0051100 Rorug07G0051200 Rorug07G0051300
rosa_samantha	Rh7AG174600 Rh7BG177800 Rh7CG183800 Rh7DG177200
rosa_wichuraiana	Rw7G015290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	60
Acc36I	ACCTGC	2 cut(s)	178, 514
AccB7I	CCANNNNNTGG	1 cut(s)	2325
AccI	GTMKAC	3 cut(s)	64, 228, 689
AciI	CCGC	4 cut(s)	609, 618, 2225, 2687
AclI	AACGTT	1 cut(s)	1215
AclWI	GGATC	5 cut(s)	772, 847, 1923, 1936, 2135
AcsI	RAATTY	7 cut(s)	313, 434, 648, 1481, 1722, 1963, 2599
AcuI	CTGAAG	1 cut(s)	1554
AcvI	CACGTG	1 cut(s)	2202
AdeI	CACNNNGTG	2 cut(s)	2027, 2307
AfaI	GTAC	1 cut(s)	2063
AfeI	AGCGCT	2 cut(s)	1327, 2533
AfiI	CCNNNNNNNGG	4 cut(s)	901, 1718, 2325, 2735
AflIII	ACRYGT	3 cut(s)	1234, 2064, 2199
AjiI	CACGTC	1 cut(s)	733
AjnI	CCWGG	5 cut(s)	156, 395, 1019, 1219, 2023
AjuI	GAANNNNNNNTTGG	2 cut(s)	1111, 1143
Alw21I	GWGCWC	2 cut(s)	1377, 2301
Alw26I	GTCTC	5 cut(s)	46, 245, 1581, 1800, 2664
AlwI	GGATC	5 cut(s)	772, 847, 1923, 1936, 2135
Ama87I	CYCGRG	1 cut(s)	1067
Aor51HI	AGCGCT	2 cut(s)	1327, 2533
AoxI	GGCC	1 cut(s)	1619
ApeKI	GCWGC	3 cut(s)	471, 2467, 2684
ApoI	RAATTY	7 cut(s)	313, 434, 648, 1481, 1722, 1963, 2599
ArsI	GACNNNNNNTTYG	2 cut(s)	2642, 2674
AseI	ATTAAT	1 cut(s)	528
Asp700I	GAANNNNTTC	5 cut(s)	587, 1092, 1215, 2210, 2385
AspLEI	GCGC	3 cut(s)	409, 1328, 2534
AspS9I	GGNCC	2 cut(s)	197, 803
AsuC2I	CCSGG	2 cut(s)	201, 2736
AsuHPI	GGTGA	5 cut(s)	103, 233, 761, 1166, 1594
AsuNHI	GCTAGC	1 cut(s)	1202
AvaI	CYCGRG	1 cut(s)	1067
AvaII	GGWCC	2 cut(s)	197, 803
BamHI	GGATCC	1 cut(s)	1928
BanII	GRGCYC	1 cut(s)	1377
BauI	CACGAG	1 cut(s)	1907
BbrPI	CACGTG	1 cut(s)	2202
BbsI	GAAGAC	2 cut(s)	635, 1043
Bbv12I	GWGCWC	2 cut(s)	1377, 2301
BbvCI	CCTCAGC	1 cut(s)	2145
BbvI	GCAGC	3 cut(s)	483, 2479, 2671
BccI	CCATC	9 cut(s)	559, 634, 992, 1061, 1553, 1606, 1822, 2454, 2489
BceAI	ACGGC	3 cut(s)	309, 1158, 1502
BciT130I	CCWGG	5 cut(s)	158, 397, 1021, 1221, 2025
BciVI	GTATCC	1 cut(s)	2331
BcnI	CCSGG	2 cut(s)	201, 2736
BcoDI	GTCTC	5 cut(s)	46, 245, 1581, 1800, 2664
BfaI	CTAG	8 cut(s)	767, 921, 1193, 1203, 1778, 1853, 2051, 2102
BfmI	CTRYAG	2 cut(s)	273, 402
BfoI	RGCGCY	2 cut(s)	1329, 2535
BfuAI	ACCTGC	2 cut(s)	178, 514
BfuI	GTATCC	1 cut(s)	2331
BglII	AGATCT	2 cut(s)	955, 2448
BisI	GCNGC	5 cut(s)	472, 610, 619, 2468, 2685
BlpI	GCTNAGC	1 cut(s)	2723
BlsI	GCNGC	5 cut(s)	473, 611, 620, 2469, 2686
Bme1390I	CCNGG	7 cut(s)	158, 201, 397, 1021, 1221, 2025, 2736
Bme18I	GGWCC	2 cut(s)	197, 803
BmeT110I	CYCGRG	1 cut(s)	1067
BmgBI	CACGTC	1 cut(s)	733
BmgT120I	GGNCC	2 cut(s)	197, 803
BmiI	GGNNCC	4 cut(s)	199, 1734, 1930, 2703
BmrFI	CCNGG	7 cut(s)	158, 201, 397, 1021, 1221, 2025, 2736
BmrI	ACTGGG	2 cut(s)	2343, 2724
BmsI	GCATC	5 cut(s)	115, 418, 494, 1006, 2671
BmtI	GCTAGC	1 cut(s)	1206
BmuI	ACTGGG	2 cut(s)	2343, 2724
BpiI	GAAGAC	2 cut(s)	635, 1043
BplI	GAGNNNNNCTC	2 cut(s)	1780, 1812
BpmI	CTGGAG	3 cut(s)	179, 1042, 1118
Bpu10I	CCTNAGC	2 cut(s)	1898, 2145
Bpu1102I	GCTNAGC	1 cut(s)	2723
BpuEI	CTTGAG	9 cut(s)	560, 803, 822, 1391, 1853, 2527, 2598, 2603, 2690
BpuMI	CCSGG	2 cut(s)	201, 2736
BsaAI	YACGTR	1 cut(s)	2202
BsaI	GGTCTC	1 cut(s)	46
BsaJI	CCNNGG	2 cut(s)	395, 2319
Bsc4I	CCNNNNNNNGG	4 cut(s)	901, 1718, 2325, 2735
Bse1I	ACTGG	9 cut(s)	1723, 1823, 2199, 2254, 2330, 2338, 2396, 2415, 2719
Bse3DI	GCAATG	1 cut(s)	1161
BseBI	CCWGG	5 cut(s)	158, 397, 1021, 1221, 2025
BseDI	CCNNGG	2 cut(s)	395, 2319
BseGI	GGATG	3 cut(s)	409, 421, 2465
BseLI	CCNNNNNNNGG	4 cut(s)	901, 1718, 2325, 2735
BseMI	GCAATG	1 cut(s)	1161
BseMII	CTCAG	8 cut(s)	492, 903, 1632, 1658, 1930, 1967, 2136, 2737
BseNI	ACTGG	9 cut(s)	1723, 1823, 2199, 2254, 2330, 2338, 2396, 2415, 2719
BseRI	GAGGAG	3 cut(s)	466, 2162, 2687
BseXI	GCAGC	3 cut(s)	483, 2479, 2671
BseYI	CCCAGC	2 cut(s)	1109, 2705
BshFI	GGCC	1 cut(s)	1621
BsiHKAI	GWGCWC	2 cut(s)	1377, 2301
BsiHKCI	CYCGRG	1 cut(s)	1067
BsiSI	CCGG	2 cut(s)	201, 2736
BslFI	GGGAC	3 cut(s)	183, 2347, 2495
BslI	CCNNNNNNNGG	4 cut(s)	901, 1718, 2325, 2735
BsmAI	GTCTC	5 cut(s)	46, 245, 1581, 1800, 2664
BsmBI	CGTCTC	1 cut(s)	245
BsmFI	GGGAC	3 cut(s)	183, 2347, 2495
BsmI	GAATGC	3 cut(s)	1183, 1497, 2577
BsnI	GGCC	1 cut(s)	1621
Bso31I	GGTCTC	1 cut(s)	46
BsoBI	CYCGRG	1 cut(s)	1067
Bsp1286I	GDGCHC	2 cut(s)	1377, 2301
Bsp1407I	TGTACA	1 cut(s)	2061
Bsp1720I	GCTNAGC	1 cut(s)	2723
Bsp19I	CCATGG	1 cut(s)	2319
BspACI	CCGC	4 cut(s)	609, 618, 2225, 2687
BspANI	GGCC	1 cut(s)	1621
BspCNI	CTCAG	8 cut(s)	491, 902, 1633, 1659, 1929, 1968, 2137, 2736
BspLI	GGNNCC	4 cut(s)	199, 1734, 1930, 2703
BspMI	ACCTGC	2 cut(s)	178, 514
BspOI	GCTAGC	1 cut(s)	1206
BspPI	GGATC	5 cut(s)	772, 847, 1923, 1936, 2135
BspQI	GCTCTTC	1 cut(s)	423
BspTNI	GGTCTC	1 cut(s)	46
BsrDI	GCAATG	1 cut(s)	1161
BsrGI	TGTACA	1 cut(s)	2061
BsrI	ACTGG	9 cut(s)	1723, 1823, 2199, 2254, 2330, 2338, 2396, 2415, 2719
BssECI	CCNNGG	2 cut(s)	395, 2319
BssNAI	GTATAC	1 cut(s)	690
BssSI	CACGAG	1 cut(s)	1907
BssT1I	CCWWGG	1 cut(s)	2319
Bst1107I	GTATAC	1 cut(s)	690
Bst2BI	CACGAG	1 cut(s)	1907
Bst2UI	CCWGG	5 cut(s)	158, 397, 1021, 1221, 2025
Bst6I	CTCTTC	4 cut(s)	423, 663, 1530, 2201
BstAPI	GCANNNNNTGC	1 cut(s)	1049
BstAUI	TGTACA	1 cut(s)	2061
BstBAI	YACGTR	1 cut(s)	2202
BstC8I	GCNNGC	4 cut(s)	215, 292, 1204, 1623
BstDSI	CCRYGG	1 cut(s)	2319
BstF5I	GGATG	3 cut(s)	409, 421, 2465
BstH2I	RGCGCY	2 cut(s)	1329, 2535
BstHHI	GCGC	3 cut(s)	409, 1328, 2534
BstMAI	GTCTC	5 cut(s)	46, 245, 1581, 1800, 2664
BstMWI	GCNNNNNNNGC	6 cut(s)	179, 413, 615, 618, 1049, 1687
BstNI	CCWGG	5 cut(s)	158, 397, 1021, 1221, 2025
BstNSI	RCATGY	3 cut(s)	1079, 1238, 2068
BstSCI	CCNGG	7 cut(s)	156, 199, 395, 1019, 1219, 2023, 2734
BstSFI	CTRYAG	2 cut(s)	273, 402
BstV1I	GCAGC	3 cut(s)	483, 2479, 2671
BstV2I	GAAGAC	2 cut(s)	635, 1043
BstX2I	RGATCY	6 cut(s)	777, 852, 955, 1928, 2127, 2448
BstYI	RGATCY	6 cut(s)	777, 852, 955, 1928, 2127, 2448
BstZ17I	GTATAC	1 cut(s)	690
BsuI	GTATCC	1 cut(s)	2331
BsuRI	GGCC	1 cut(s)	1621
BtgI	CCRYGG	1 cut(s)	2319
BtrI	CACGTC	1 cut(s)	733
BtsCI	GGATG	3 cut(s)	409, 421, 2465
BtsIMutI	CAGTG	6 cut(s)	54, 268, 1471, 1664, 1844, 2192
BveI	ACCTGC	2 cut(s)	178, 514
Cac8I	GCNNGC	4 cut(s)	215, 292, 1204, 1623
CfoI	GCGC	3 cut(s)	409, 1328, 2534
Cfr13I	GGNCC	2 cut(s)	197, 803
CsiI	ACCWGGT	1 cut(s)	2023
Csp6I	GTAC	1 cut(s)	2062
CviQI	GTAC	1 cut(s)	2062
DraI	TTTAAA	1 cut(s)	1381
DraIII	CACNNNGTG	2 cut(s)	2027, 2307
DrdI	GACNNNNNNGTC	1 cut(s)	60
DseDI	GACNNNNNNGTC	1 cut(s)	60
Eam1104I	CTCTTC	4 cut(s)	423, 663, 1530, 2201
EarI	CTCTTC	4 cut(s)	423, 663, 1530, 2201
Ecl136II	GAGCTC	1 cut(s)	1375
Eco130I	CCWWGG	1 cut(s)	2319
Eco24I	GRGCYC	1 cut(s)	1377
Eco31I	GGTCTC	1 cut(s)	46
Eco32I	GATATC	1 cut(s)	1768
Eco47I	GGWCC	2 cut(s)	197, 803
Eco47III	AGCGCT	2 cut(s)	1327, 2533
Eco53kI	GAGCTC	1 cut(s)	1375
Eco57I	CTGAAG	1 cut(s)	1554
Eco72I	CACGTG	1 cut(s)	2202
Eco88I	CYCGRG	1 cut(s)	1067
EcoICRI	GAGCTC	1 cut(s)	1375
EcoRI	GAATTC	2 cut(s)	434, 1722
EcoRII	CCWGG	5 cut(s)	156, 395, 1019, 1219, 2023
EcoRV	GATATC	1 cut(s)	1768
EcoT14I	CCWWGG	1 cut(s)	2319
EcoT22I	ATGCAT	1 cut(s)	1497
EcoT38I	GRGCYC	1 cut(s)	1377
ErhI	CCWWGG	1 cut(s)	2319
Esp3I	CGTCTC	1 cut(s)	245
FalI	AAGNNNNNCTT	2 cut(s)	738, 770
FaqI	GGGAC	3 cut(s)	183, 2347, 2495
FauNDI	CATATG	2 cut(s)	605, 1997
FblI	GTMKAC	3 cut(s)	64, 228, 689
Fnu4HI	GCNGC	5 cut(s)	472, 610, 619, 2468, 2685
FokI	GGATG	3 cut(s)	396, 408, 2472
FriOI	GRGCYC	1 cut(s)	1377
Fsp4HI	GCNGC	5 cut(s)	472, 610, 619, 2468, 2685
FspBI	CTAG	8 cut(s)	767, 921, 1193, 1203, 1778, 1853, 2051, 2102
GlaI	GCGC	3 cut(s)	408, 1327, 2533
GluI	GCNGC	5 cut(s)	472, 610, 619, 2468, 2685
GsaI	CCCAGC	2 cut(s)	1113, 2709
GsuI	CTGGAG	3 cut(s)	179, 1042, 1118
HaeII	RGCGCY	2 cut(s)	1329, 2535
HaeIII	GGCC	1 cut(s)	1621
HapII	CCGG	2 cut(s)	201, 2736
HhaI	GCGC	3 cut(s)	409, 1328, 2534
Hin6I	GCGC	3 cut(s)	407, 1326, 2532
HinP1I	GCGC	3 cut(s)	407, 1326, 2532
HincII	GTYRAC	1 cut(s)	65
HindII	GTYRAC	1 cut(s)	65
HindIII	AAGCTT	2 cut(s)	180, 2405
HpaII	CCGG	2 cut(s)	201, 2736
HphI	GGTGA	5 cut(s)	103, 233, 761, 1166, 1594
Hpy166II	GTNNAC	9 cut(s)	65, 154, 229, 690, 752, 929, 1271, 2176, 2515
Hpy8I	GTNNAC	9 cut(s)	65, 154, 229, 690, 752, 929, 1271, 2176, 2515
HpyAV	CCTTC	6 cut(s)	336, 458, 509, 658, 1397, 1847
HpyCH4IV	ACGT	5 cut(s)	732, 823, 1215, 2189, 2201
HpyF10VI	GCNNNNNNNGC	6 cut(s)	179, 413, 615, 618, 1049, 1687
HpySE526I	ACGT	5 cut(s)	732, 823, 1215, 2189, 2201
HspAI	GCGC	3 cut(s)	407, 1326, 2532
LguI	GCTCTTC	1 cut(s)	423
LmnI	GCTCC	4 cut(s)	479, 730, 1732, 1894
Lsp1109I	GCAGC	3 cut(s)	483, 2479, 2671
LweI	GCATC	5 cut(s)	115, 418, 494, 1006, 2671
MabI	ACCWGGT	1 cut(s)	2023
MaeI	CTAG	8 cut(s)	767, 921, 1193, 1203, 1778, 1853, 2051, 2102
MaeII	ACGT	5 cut(s)	732, 823, 1215, 2189, 2201
MaeIII	GTNAC	5 cut(s)	134, 937, 1803, 2190, 2349
MfeI	CAATTG	4 cut(s)	993, 1119, 2122, 2135
MflI	RGATCY	6 cut(s)	777, 852, 955, 1928, 2127, 2448
MhlI	GDGCHC	2 cut(s)	1377, 2301
MlyI	GAGTC	1 cut(s)	1033
MmeI	TCCRAC	2 cut(s)	463, 1956
Mph1103I	ATGCAT	1 cut(s)	1497
MroXI	GAANNNNTTC	5 cut(s)	587, 1092, 1215, 2210, 2385
MslI	CAYNNNNRTG	2 cut(s)	465, 1239
MspI	CCGG	2 cut(s)	201, 2736
MspR9I	CCNGG	7 cut(s)	158, 201, 397, 1021, 1221, 2025, 2736
MunI	CAATTG	4 cut(s)	993, 1119, 2122, 2135
Mva1269I	GAATGC	3 cut(s)	1183, 1497, 2577
MvaI	CCWGG	5 cut(s)	158, 397, 1021, 1221, 2025
MwoI	GCNNNNNNNGC	6 cut(s)	179, 413, 615, 618, 1049, 1687
NciI	CCSGG	2 cut(s)	201, 2736
NcoI	CCATGG	1 cut(s)	2319
NdeI	CATATG	2 cut(s)	605, 1997
NheI	GCTAGC	1 cut(s)	1202
NlaIV	GGNNCC	4 cut(s)	199, 1734, 1930, 2703
NmuCI	GTSAC	4 cut(s)	134, 937, 1803, 2190
NsiI	ATGCAT	1 cut(s)	1497
NspI	RCATGY	3 cut(s)	1079, 1238, 2068
PaeR7I	CTCGAG	1 cut(s)	1067
PciI	ACATGT	2 cut(s)	1234, 2064
PciSI	GCTCTTC	1 cut(s)	423
PctI	GAATGC	3 cut(s)	1183, 1497, 2577
PdmI	GAANNNNTTC	5 cut(s)	587, 1092, 1215, 2210, 2385
PflMI	CCANNNNNTGG	1 cut(s)	2325
PfoI	TCCNGGA	2 cut(s)	199, 1219
PkrI	GCNGC	5 cut(s)	473, 611, 620, 2469, 2686
PleI	GAGTC	1 cut(s)	1032
PmaCI	CACGTG	1 cut(s)	2202
PmlI	CACGTG	1 cut(s)	2202
PpsI	GAGTC	1 cut(s)	1032
Ppu21I	YACGTR	1 cut(s)	2202
PscI	ACATGT	2 cut(s)	1234, 2064
PshBI	ATTAAT	1 cut(s)	528
Psp124BI	GAGCTC	1 cut(s)	1377
Psp1406I	AACGTT	1 cut(s)	1215
Psp6I	CCWGG	5 cut(s)	156, 395, 1019, 1219, 2023
PspCI	CACGTG	1 cut(s)	2202
PspFI	CCCAGC	2 cut(s)	1109, 2705
PspGI	CCWGG	5 cut(s)	156, 395, 1019, 1219, 2023
PspN4I	GGNNCC	4 cut(s)	199, 1734, 1930, 2703
PspPI	GGNCC	2 cut(s)	197, 803
PsuI	RGATCY	6 cut(s)	777, 852, 955, 1928, 2127, 2448
RsaI	GTAC	1 cut(s)	2063
RsaNI	GTAC	1 cut(s)	2062
RseI	CAYNNNNRTG	2 cut(s)	465, 1239
SacI	GAGCTC	1 cut(s)	1377
SalI	GTCGAC	1 cut(s)	63
SapI	GCTCTTC	1 cut(s)	423
SatI	GCNGC	5 cut(s)	472, 610, 619, 2468, 2685
Sau96I	GGNCC	2 cut(s)	197, 803
SchI	GAGTC	1 cut(s)	1033
ScrFI	CCNGG	7 cut(s)	158, 201, 397, 1021, 1221, 2025, 2736
SduI	GDGCHC	2 cut(s)	1377, 2301
SexAI	ACCWGGT	1 cut(s)	2023
SfaNI	GCATC	5 cut(s)	115, 418, 494, 1006, 2671
SfcI	CTRYAG	2 cut(s)	273, 402
Sfr274I	CTCGAG	1 cut(s)	1067
SinI	GGWCC	2 cut(s)	197, 803
SlaI	CTCGAG	1 cut(s)	1067
SmiMI	CAYNNNNRTG	2 cut(s)	465, 1239
SsiI	CCGC	4 cut(s)	609, 618, 2225, 2687
SspI	AATATT	1 cut(s)	526
SspMI	CTAG	8 cut(s)	767, 921, 1193, 1203, 1778, 1853, 2051, 2102
SstI	GAGCTC	1 cut(s)	1377
StyD4I	CCNGG	7 cut(s)	156, 199, 395, 1019, 1219, 2023, 2734
StyI	CCWWGG	1 cut(s)	2319
TaiI	ACGT	5 cut(s)	735, 826, 1218, 2192, 2204
TaqI	TCGA	8 cut(s)	64, 681, 1056, 1068, 1341, 2079, 2108, 2436
TatI	WGTACW	1 cut(s)	2061
TauI	GCSGC	2 cut(s)	612, 621
TscAI	CASTG	6 cut(s)	54, 268, 1471, 1671, 1851, 2199
TseFI	GTSAC	4 cut(s)	134, 937, 1803, 2190
TseI	GCWGC	3 cut(s)	471, 2467, 2684
Tsp45I	GTSAC	4 cut(s)	134, 937, 1803, 2190
TspDTI	ATGAA	9 cut(s)	179, 405, 410, 477, 1278, 1775, 1829, 2175, 2609
TspGWI	ACGGA	2 cut(s)	122, 2541
TspRI	CASTG	6 cut(s)	54, 268, 1471, 1671, 1851, 2199
Van91I	CCANNNNNTGG	1 cut(s)	2325
VpaK11BI	GGWCC	2 cut(s)	197, 803
VspI	ATTAAT	1 cut(s)	528
XapI	RAATTY	7 cut(s)	313, 434, 648, 1481, 1722, 1963, 2599
XbaI	TCTAGA	1 cut(s)	1852
XceI	RCATGY	3 cut(s)	1079, 1238, 2068
XcmI	CCANNNNNNNNNTGG	1 cut(s)	39
XhoI	CTCGAG	1 cut(s)	1067
XmiI	GTMKAC	3 cut(s)	64, 228, 689
XmnI	GAANNNNTTC	5 cut(s)	587, 1092, 1215, 2210, 2385
XspI	CTAG	8 cut(s)	767, 921, 1193, 1203, 1778, 1853, 2051, 2102
Zsp2I	ATGCAT	1 cut(s)	1497

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.