Rh7BG177800

Heat Stress Transcription Factor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
14001589 .. 14002733
1145 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG177800.1

Sequence Viewer

Length: 1053 bp
ATGGCTGCGTTGCCGGACCAGAACGGCGATTCGGCGTCCGGCGGCGGCGGCGGACGGGAGTCGCAGAGGACGATTCCGACGCCGTTTTTGACGAAAACGTATGAGCTCGTGGACGATCCGGAGGCCGACGATTTGATTTCGTGGAGCGAAGGCGGATCGACTTTCATAGTGTGGCGGCCGGCCGAATTTGCCAGAGATATACTCCCCAAGTACTTCAAACACAACAACTTCTCCAGCTTCGTCCGCCAGCTAAACACTTATGGATTTCGGAAGGTTGTTCCGGATCGGTGGGAGTTTGCCAACGACTGCTTCAAGAGAGGGGAGAAAGGACTCCTCCGCGAGATTCAGCGCCGGAAGATCTCTCCGGCGGTCTCCGCTTCCGCAGCGGCGGTTGTGGCGGCGGCGACCGTGACGGCGGCGACACTGCCTCCAGCGACGGTTTCGGTTTCTCCGGCAAACTCCGGCGACGAGCAGGTGATCTCGTCCAACTCGTCTCCGATGGCCGTGCCGCCGCCGACTCCGACGGTGGCGTTGCTGCCGCGAACCAGGAGCTGCAACACCACGACGGAGATTCTAGAGGAGAACGAGCGGTTGAGGAAAGAGAACATGCAGCTCAGCCAGGAGCTGGCTCAGCTTCGGGGGTTGTGTAACAATATACTAGCAATGATGACCAACTACGCCTCGGGGCAGTTAGCGAGAGGCGGCGGAGCAGCGGCCGAGGATAAGCGGCCACATCCGCTGTCTCTTGCGGTGAAAAAATCTCGAGAGGGTGAAAACGCCGCCGTAGAAGGCGGTGACAAGGCGGAGTACTCGGCGGGGGAAGAGGAGATGGAGGAGGATCAGGAGGAGGAAACGCCGCCGCCGCTGCTTCCGATTCAGACGCCGAAGCTGTTTGGGGTTTCAATCGGGGTGAAGCGCGTGAGGAGAGACGAGGAGGAGGAGGAGGATCATGAGCGTCAAAACCATGGGTGTGATGAGGTGGTGAAGCCGGAGCCGTCGGATGGGAGCTCCAAGCACGATAAGGAGGCTACGTGGCTGGAGCTGAGGAAGTGA

Protein Analysis

350

Amino Acids

38.32

Weight (kDa)

5.04

Isoelectric Point (pI)

57.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSF_DNA-bind PF00447 29 - 118 6.1e-31 HSF-type DNA-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 463
Acc36I ACCTGC 1 cut(s) 463
AccB7I CCANNNNNTGG 1 cut(s) 625
AccBSI CCGCTC 1 cut(s) 589
AccII CGCG 3 cut(s) 339, 541, 918
AccIII TCCGGA 2 cut(s) 118, 280
AclWI GGATC 5 cut(s) 110, 163, 291, 846, 954
AcoI YGGCCR 5 cut(s) 176, 180, 501, 714, 728
AcsI RAATTY 1 cut(s) 185
AcyI GRCGYC 3 cut(s) 35, 80, 881
AfaI GTAC 2 cut(s) 212, 809
AfiI CCNNNNNNNGG 2 cut(s) 625, 1001
AgsI TTSAA 3 cut(s) 217, 313, 903
AjnI CCWGG 2 cut(s) 545, 618
AjuI GAANNNNNNNTTGG 2 cut(s) 293, 325
Alw21I GWGCWC 2 cut(s) 108, 1010
Alw26I GTCTC 4 cut(s) 376, 498, 747, 921
AlwI GGATC 5 cut(s) 110, 163, 291, 846, 954
AlwNI CAGNNNCTG 2 cut(s) 552, 625
Ama87I CYCGRG 2 cut(s) 682, 762
Aor13HI TCCGGA 2 cut(s) 118, 280
AoxI GGCC 6 cut(s) 123, 176, 180, 501, 714, 728
ApeKI GCWGC 7 cut(s) 5, 383, 535, 552, 610, 710, 865
ApoI RAATTY 1 cut(s) 185
ArsI GACNNNNNNTTYG 2 cut(s) 70, 102
AspLEI GCGC 2 cut(s) 351, 918
AspS9I GGNCC 1 cut(s) 16
AsuHPI GGTGA 6 cut(s) 487, 763, 782, 806, 922, 994
AvaI CYCGRG 2 cut(s) 682, 762
AvaII GGWCC 1 cut(s) 16
BanII GRGCYC 2 cut(s) 108, 1010
BauI CACGAG 1 cut(s) 107
Bbv12I GWGCWC 2 cut(s) 108, 1010
BbvCI CCTCAGC 1 cut(s) 1043
BbvI GCAGC 6 cut(s) 395, 522, 539, 622, 722, 852
BccI CCATC 3 cut(s) 493, 823, 995
BceAI ACGGC 6 cut(s) 40, 67, 429, 488, 767, 979
BcgI CGANNNNNNTGC 2 cut(s) 487, 521
BciT130I CCWGG 2 cut(s) 547, 620
BcoDI GTCTC 4 cut(s) 376, 498, 747, 921
BfaI CTAG 2 cut(s) 575, 659
BfoI RGCGCY 1 cut(s) 352
BfuAI ACCTGC 1 cut(s) 463
BglII AGATCT 1 cut(s) 357
BlpI GCTNAGC 2 cut(s) 614, 630
BmcAI AGTACT 2 cut(s) 212, 809
Bme1390I CCNGG 2 cut(s) 547, 620
Bme18I GGWCC 1 cut(s) 16
BmeT110I CYCGRG 2 cut(s) 682, 762
BmgT120I GGNCC 1 cut(s) 16
BmiI GGNNCC 1 cut(s) 993
BmrFI CCNGG 2 cut(s) 547, 620
BoxI GACNNNNGTC 1 cut(s) 58
BplI GAGNNNNNCTC 2 cut(s) 186, 218
BpmI CTGGAG 2 cut(s) 217, 414
Bpu10I CCTNAGC 1 cut(s) 1043
Bpu1102I GCTNAGC 2 cut(s) 614, 630
BsaAI YACGTR 1 cut(s) 1032
BsaHI GRCGYC 3 cut(s) 35, 80, 881
BsaI GGTCTC 1 cut(s) 376
BsaJI CCNNGG 3 cut(s) 681, 717, 964
BsaWI WCCGGW 2 cut(s) 118, 280
BsaXI ACNNNNNCTCC 6 cut(s) 215, 245, 412, 442, 1016, 1046
Bsc4I CCNNNNNNNGG 2 cut(s) 625, 1001
Bse118I RCCGGY 1 cut(s) 178
Bse3DI GCAATG 1 cut(s) 669
BseAI TCCGGA 2 cut(s) 118, 280
BseBI CCWGG 2 cut(s) 547, 620
BseDI CCNNGG 3 cut(s) 681, 717, 964
BseGI GGATG 2 cut(s) 733, 1006
BseLI CCNNNNNNNGG 2 cut(s) 625, 1001
BseMI GCAATG 1 cut(s) 669
BseMII CTCAG 3 cut(s) 628, 644, 1034
BseX3I CGGCCG 3 cut(s) 176, 180, 714
BseXI GCAGC 6 cut(s) 395, 522, 539, 622, 722, 852
Bsh1236I CGCG 3 cut(s) 339, 541, 918
Bsh1285I CGRYCG 4 cut(s) 179, 183, 408, 717
BshFI GGCC 6 cut(s) 125, 178, 182, 503, 716, 730
BsiEI CGRYCG 4 cut(s) 179, 183, 408, 717
BsiHKAI GWGCWC 2 cut(s) 108, 1010
BsiHKCI CYCGRG 2 cut(s) 682, 762
BslI CCNNNNNNNGG 2 cut(s) 625, 1001
BsmAI GTCTC 4 cut(s) 376, 498, 747, 921
BsmBI CGTCTC 2 cut(s) 498, 921
BsnI GGCC 6 cut(s) 125, 178, 182, 503, 716, 730
Bso31I GGTCTC 1 cut(s) 376
BsoBI CYCGRG 2 cut(s) 682, 762
Bsp1286I GDGCHC 2 cut(s) 108, 1010
Bsp13I TCCGGA 2 cut(s) 118, 280
Bsp143I GATC 7 cut(s) 115, 155, 283, 357, 477, 838, 946
Bsp1720I GCTNAGC 2 cut(s) 614, 630
Bsp19I CCATGG 1 cut(s) 964
BspANI GGCC 6 cut(s) 125, 178, 182, 503, 716, 730
BspCNI CTCAG 3 cut(s) 627, 643, 1035
BspEI TCCGGA 2 cut(s) 118, 280
BspFNI CGCG 3 cut(s) 339, 541, 918
BspHI TCATGA 1 cut(s) 949
BspLI GGNNCC 1 cut(s) 993
BspMI ACCTGC 1 cut(s) 463
BspPI GGATC 5 cut(s) 110, 163, 291, 846, 954
BspTNI GGTCTC 1 cut(s) 376
BsrBI CCGCTC 1 cut(s) 589
BsrDI GCAATG 1 cut(s) 669
BsrFI RCCGGY 1 cut(s) 178
BssAI RCCGGY 1 cut(s) 178
BssECI CCNNGG 3 cut(s) 681, 717, 964
BssMI GATC 7 cut(s) 115, 155, 283, 357, 477, 838, 946
BssNI GRCGYC 3 cut(s) 35, 80, 881
BssSI CACGAG 1 cut(s) 107
BssT1I CCWWGG 1 cut(s) 964
Bst2BI CACGAG 1 cut(s) 107
Bst2UI CCWGG 2 cut(s) 547, 620
Bst4CI ACNGT 3 cut(s) 409, 439, 526
Bst6I CTCTTC 1 cut(s) 816
BstACI GRCGYC 3 cut(s) 35, 80, 881
BstBAI YACGTR 1 cut(s) 1032
BstC8I GCNNGC 3 cut(s) 180, 248, 627
BstDEI CTNAG 3 cut(s) 614, 630, 1043
BstDSI CCRYGG 1 cut(s) 964
BstF5I GGATG 2 cut(s) 733, 1006
BstFNI CGCG 3 cut(s) 339, 541, 918
BstH2I RGCGCY 1 cut(s) 352
BstHHI GCGC 2 cut(s) 351, 918
BstKTI GATC 7 cut(s) 118, 158, 286, 360, 480, 841, 949
BstMAI GTCTC 4 cut(s) 376, 498, 747, 921
BstMBI GATC 7 cut(s) 115, 155, 283, 357, 477, 838, 946
BstMCI CGRYCG 4 cut(s) 179, 183, 408, 717
BstNI CCWGG 2 cut(s) 547, 620
BstNSI RCATGY 1 cut(s) 610
BstPAI GACNNNNGTC 1 cut(s) 58
BstSCI CCNGG 2 cut(s) 545, 618
BstUI CGCG 3 cut(s) 339, 541, 918
BstV1I GCAGC 6 cut(s) 395, 522, 539, 622, 722, 852
BstX2I RGATCY 1 cut(s) 357
BstYI RGATCY 1 cut(s) 357
BstZI CGGCCG 3 cut(s) 176, 180, 714
BsuRI GGCC 6 cut(s) 125, 178, 182, 503, 716, 730
BtgI CCRYGG 1 cut(s) 964
BtsCI GGATG 2 cut(s) 733, 1006
BtsI GCAGTG 1 cut(s) 422
BtsIMutI CAGTG 1 cut(s) 422
BveI ACCTGC 1 cut(s) 463
Cac8I GCNNGC 3 cut(s) 180, 248, 627
CaiI CAGNNNCTG 2 cut(s) 552, 625
CciI TCATGA 1 cut(s) 949
CfoI GCGC 2 cut(s) 351, 918
Cfr10I RCCGGY 1 cut(s) 178
Cfr13I GGNCC 1 cut(s) 16
CseI GACGC 4 cut(s) 24, 88, 889, 944
Csp6I GTAC 2 cut(s) 211, 808
CviAII CATG 3 cut(s) 607, 950, 965
CviQI GTAC 2 cut(s) 211, 808
DdeI CTNAG 3 cut(s) 614, 630, 1043
DpnI GATC 7 cut(s) 117, 157, 285, 359, 479, 840, 948
DpnII GATC 7 cut(s) 115, 155, 283, 357, 477, 838, 946
EaeI YGGCCR 5 cut(s) 176, 180, 501, 714, 728
EagI CGGCCG 3 cut(s) 176, 180, 714
Eam1104I CTCTTC 1 cut(s) 816
EarI CTCTTC 1 cut(s) 816
EciI GGCGGA 5 cut(s) 66, 168, 233, 720, 818
Ecl136II GAGCTC 2 cut(s) 106, 1008
EclXI CGGCCG 3 cut(s) 176, 180, 714
Eco130I CCWWGG 1 cut(s) 964
Eco24I GRGCYC 2 cut(s) 108, 1010
Eco31I GGTCTC 1 cut(s) 376
Eco47I GGWCC 1 cut(s) 16
Eco52I CGGCCG 3 cut(s) 176, 180, 714
Eco53kI GAGCTC 2 cut(s) 106, 1008
Eco88I CYCGRG 2 cut(s) 682, 762
EcoICRI GAGCTC 2 cut(s) 106, 1008
EcoRII CCWGG 2 cut(s) 545, 618
EcoT14I CCWWGG 1 cut(s) 964
EcoT38I GRGCYC 2 cut(s) 108, 1010
ErhI CCWWGG 1 cut(s) 964
Esp3I CGTCTC 2 cut(s) 498, 921
FaeI CATG 3 cut(s) 610, 953, 968
FaiI YATR 8 cut(s) 102, 167, 200, 261, 608, 656, 951, 966
FatI CATG 3 cut(s) 606, 949, 964
FauI CCCGC 1 cut(s) 808
FokI GGATG 2 cut(s) 720, 1013
FriOI GRGCYC 2 cut(s) 108, 1010
FseI GGCCGGCC 1 cut(s) 182
FspBI CTAG 2 cut(s) 575, 659
GlaI GCGC 2 cut(s) 350, 917
GsuI CTGGAG 2 cut(s) 217, 414
HaeII RGCGCY 1 cut(s) 352
HaeIII GGCC 6 cut(s) 125, 178, 182, 503, 716, 730
HgaI GACGC 4 cut(s) 24, 88, 889, 944
HhaI GCGC 2 cut(s) 351, 918
Hin1I GRCGYC 3 cut(s) 35, 80, 881
Hin1II CATG 3 cut(s) 610, 953, 968
Hin6I GCGC 2 cut(s) 349, 916
HinP1I GCGC 2 cut(s) 349, 916
HinfI GANTC 8 cut(s) 29, 59, 73, 330, 343, 517, 571, 874
HphI GGTGA 6 cut(s) 487, 763, 782, 806, 922, 994
Hpy166II GTNNAC 1 cut(s) 112
Hpy188I TCNGA 7 cut(s) 78, 270, 498, 522, 873, 879, 1000
Hpy188III TCNNGA 8 cut(s) 119, 281, 313, 575, 762, 764, 842, 950
Hpy8I GTNNAC 1 cut(s) 112
Hpy99I CGWCG 7 cut(s) 82, 131, 439, 470, 526, 568, 1000
HpyAV CCTTC 3 cut(s) 143, 265, 782
HpyCH4III ACNGT 3 cut(s) 409, 439, 526
HpyCH4IV ACGT 2 cut(s) 98, 1031
HpyCH4V TGCA 2 cut(s) 555, 610
HpyF3I CTNAG 3 cut(s) 614, 630, 1043
HpySE526I ACGT 2 cut(s) 98, 1031
Hsp92I GRCGYC 3 cut(s) 35, 80, 881
Hsp92II CATG 3 cut(s) 610, 953, 968
HspAI GCGC 2 cut(s) 349, 916
Kpn2I TCCGGA 2 cut(s) 118, 280
KroI GCCGGC 1 cut(s) 178
KroNI GCCGGC 1 cut(s) 180
Kzo9I GATC 7 cut(s) 115, 155, 283, 357, 477, 838, 946
LmnI GCTCC 8 cut(s) 144, 549, 622, 707, 991, 1005, 1013, 1039
Lsp1109I GCAGC 6 cut(s) 395, 522, 539, 622, 722, 852
MaeI CTAG 2 cut(s) 575, 659
MaeII ACGT 2 cut(s) 98, 1031
MaeIII GTNAC 3 cut(s) 409, 647, 794
MalI GATC 7 cut(s) 117, 157, 285, 359, 479, 840, 948
MbiI CCGCTC 1 cut(s) 589
MboI GATC 7 cut(s) 115, 155, 283, 357, 477, 838, 946
MboII GAAGA 2 cut(s) 367, 833
MflI RGATCY 1 cut(s) 357
MhlI GDGCHC 2 cut(s) 108, 1010
MluCI AATT 1 cut(s) 185
MlyI GAGTC 3 cut(s) 68, 324, 511
MmeI TCCRAC 4 cut(s) 101, 510, 545, 978
MroI TCCGGA 2 cut(s) 118, 280
MroNI GCCGGC 1 cut(s) 178
MslI CAYNNNNRTG 1 cut(s) 969
MspA1I CMGCKG 4 cut(s) 386, 713, 739, 865
MspR9I CCNGG 2 cut(s) 547, 620
MvaI CCWGG 2 cut(s) 547, 620
MvnI CGCG 3 cut(s) 339, 541, 918
NaeI GCCGGC 1 cut(s) 180
NcoI CCATGG 1 cut(s) 964
NdeII GATC 7 cut(s) 115, 155, 283, 357, 477, 838, 946
NgoMIV GCCGGC 1 cut(s) 178
NlaIII CATG 3 cut(s) 610, 953, 968
NlaIV GGNNCC 1 cut(s) 993
NmeAIII GCCGAG 2 cut(s) 742, 791
NmuCI GTSAC 2 cut(s) 409, 794
NspI RCATGY 1 cut(s) 610
PaeR7I CTCGAG 1 cut(s) 762
PagI TCATGA 1 cut(s) 949
PaqCI CACCTGC 1 cut(s) 463
PcsI WCGNNNNNNNCGW 2 cut(s) 68, 488
PdiI GCCGGC 1 cut(s) 180
PfeI GAWTC 5 cut(s) 29, 73, 343, 571, 874
PflMI CCANNNNNTGG 1 cut(s) 625
PleI GAGTC 3 cut(s) 67, 324, 511
PpsI GAGTC 3 cut(s) 67, 324, 511
Ppu21I YACGTR 1 cut(s) 1032
PshAI GACNNNNGTC 1 cut(s) 58
Psp124BI GAGCTC 2 cut(s) 108, 1010
Psp6I CCWGG 2 cut(s) 545, 618
PspGI CCWGG 2 cut(s) 545, 618
PspN4I GGNNCC 1 cut(s) 993
PspPI GGNCC 1 cut(s) 16
PstNI CAGNNNCTG 2 cut(s) 552, 625
PsuI RGATCY 1 cut(s) 357
RigI GGCCGGCC 1 cut(s) 182
RsaI GTAC 2 cut(s) 212, 809
RsaNI GTAC 2 cut(s) 211, 808
RseI CAYNNNNRTG 1 cut(s) 969
SacI GAGCTC 2 cut(s) 108, 1010
Sau3AI GATC 7 cut(s) 115, 155, 283, 357, 477, 838, 946
Sau96I GGNCC 1 cut(s) 16
ScaI AGTACT 2 cut(s) 212, 809
SchI GAGTC 3 cut(s) 68, 324, 511
ScrFI CCNGG 2 cut(s) 547, 620
SduI GDGCHC 2 cut(s) 108, 1010
Sfr274I CTCGAG 1 cut(s) 762
SinI GGWCC 1 cut(s) 16
SlaI CTCGAG 1 cut(s) 762
SmiMI CAYNNNNRTG 1 cut(s) 969
SmlI CTYRAG 1 cut(s) 762
SmoI CTYRAG 1 cut(s) 762
Sse9I AATT 1 cut(s) 185
SspMI CTAG 2 cut(s) 575, 659
SstI GAGCTC 2 cut(s) 108, 1010
StyD4I CCNGG 2 cut(s) 545, 618
StyI CCWWGG 1 cut(s) 964
TaaI ACNGT 3 cut(s) 409, 439, 526
TaiI ACGT 2 cut(s) 101, 1034
TaqI TCGA 2 cut(s) 158, 763
TasI AATT 1 cut(s) 185
TatI WGTACW 2 cut(s) 210, 807
TfiI GAWTC 5 cut(s) 29, 73, 343, 571, 874
TscAI CASTG 1 cut(s) 429
TseFI GTSAC 2 cut(s) 409, 794
TseI GCWGC 7 cut(s) 5, 383, 535, 552, 610, 710, 865
Tsp45I GTSAC 2 cut(s) 409, 794
TspDTI ATGAA 1 cut(s) 154
TspGWI ACGGA 1 cut(s) 581
TspRI CASTG 1 cut(s) 429
Van91I CCANNNNNTGG 1 cut(s) 625
VpaK11BI GGWCC 1 cut(s) 16
XapI RAATTY 1 cut(s) 185
XbaI TCTAGA 1 cut(s) 574
XceI RCATGY 1 cut(s) 610
XhoI CTCGAG 1 cut(s) 762
XspI CTAG 2 cut(s) 575, 659
ZrmI AGTACT 2 cut(s) 212, 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.