Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G47360 |
| fragaria_vesca | FvH4_5g19630 FvH4_5g19630 |
| malus_domestica | MD04G1061400.v1.1 MD06G1055200.v1.1 |
| prunus_persica | Prupe.4G276000_v2.0.a1 Prupe.4G276000_v2.0.a1 |
| pyrus_communis | pycom04g05510 pycom06g04620 |
| rosa_chinensis | RchiOBHm_Chr7g0204361 |
| rosa_laevigata | RLG00000003470 |
| rosa_multiflora | Rmu_sc0012268.1_g000001 Rmu_sc0012666.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00253200 |
| rosa_rugosa | Rorug07G0082000 Rorug07G0082100 Rorug07G0082200 Rorug07G0082300 Rorug07G0082400 Rorug07G0082500 |
| rosa_samantha | Rh7AG212700 Rh7DG220100 |
| rosa_wichuraiana | Rw7G018430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcyI | GRCGYC | 1 cut(s) | 201 |
| AjnI | CCWGG | 1 cut(s) | 18 |
| AluBI | AGCT | 1 cut(s) | 6 |
| AluI | AGCT | 1 cut(s) | 6 |
| Alw21I | GWGCWC | 1 cut(s) | 123 |
| AoxI | GGCC | 2 cut(s) | 64, 73 |
| AspS9I | GGNCC | 1 cut(s) | 235 |
| AvaII | GGWCC | 1 cut(s) | 235 |
| BanII | GRGCYC | 1 cut(s) | 216 |
| Bbv12I | GWGCWC | 1 cut(s) | 123 |
| BccI | CCATC | 1 cut(s) | 237 |
| BceAI | ACGGC | 1 cut(s) | 127 |
| BciT130I | CCWGG | 1 cut(s) | 20 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 72 |
| BlpI | GCTNAGC | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 1 cut(s) | 20 |
| Bme18I | GGWCC | 1 cut(s) | 235 |
| BmgT120I | GGNCC | 1 cut(s) | 235 |
| BmiI | GGNNCC | 1 cut(s) | 237 |
| BmrFI | CCNGG | 1 cut(s) | 20 |
| BmsI | GCATC | 1 cut(s) | 140 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 7 |
| BsaHI | GRCGYC | 1 cut(s) | 201 |
| BsaJI | CCNNGG | 1 cut(s) | 19 |
| BsaWI | WCCGGW | 1 cut(s) | 232 |
| BseBI | CCWGG | 1 cut(s) | 20 |
| BseDI | CCNNGG | 1 cut(s) | 19 |
| BseGI | GGATG | 2 cut(s) | 131, 229 |
| BseMII | CTCAG | 1 cut(s) | 201 |
| BseRI | GAGGAG | 1 cut(s) | 157 |
| BshFI | GGCC | 2 cut(s) | 66, 75 |
| BsiHKAI | GWGCWC | 1 cut(s) | 123 |
| BsiSI | CCGG | 1 cut(s) | 233 |
| BslFI | GGGAC | 2 cut(s) | 139, 221 |
| BsmFI | GGGAC | 2 cut(s) | 139, 221 |
| BsnI | GGCC | 2 cut(s) | 66, 75 |
| Bsp1286I | GDGCHC | 2 cut(s) | 123, 216 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 7 |
| BspANI | GGCC | 2 cut(s) | 66, 75 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BspLI | GGNNCC | 1 cut(s) | 237 |
| BssECI | CCNNGG | 1 cut(s) | 19 |
| BssNI | GRCGYC | 1 cut(s) | 201 |
| Bst2UI | CCWGG | 1 cut(s) | 20 |
| Bst6I | CTCTTC | 1 cut(s) | 261 |
| BstACI | GRCGYC | 1 cut(s) | 201 |
| BstDEI | CTNAG | 2 cut(s) | 7, 210 |
| BstF5I | GGATG | 2 cut(s) | 131, 229 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 72, 200 |
| BstNI | CCWGG | 1 cut(s) | 20 |
| BstSCI | CCNGG | 1 cut(s) | 18 |
| BsuRI | GGCC | 2 cut(s) | 66, 75 |
| BtsCI | GGATG | 2 cut(s) | 131, 229 |
| BtsIMutI | CAGTG | 1 cut(s) | 207 |
| Cfr13I | GGNCC | 1 cut(s) | 235 |
| CseI | GACGC | 1 cut(s) | 209 |
| CviAII | CATG | 1 cut(s) | 115 |
| CviJI | RGCY | 5 cut(s) | 6, 24, 66, 75, 214 |
| CviKI_1 | RGCY | 5 cut(s) | 6, 24, 66, 75, 214 |
| DdeI | CTNAG | 2 cut(s) | 7, 210 |
| Eam1104I | CTCTTC | 1 cut(s) | 261 |
| EarI | CTCTTC | 1 cut(s) | 261 |
| Eco24I | GRGCYC | 1 cut(s) | 216 |
| Eco47I | GGWCC | 1 cut(s) | 235 |
| EcoRII | CCWGG | 1 cut(s) | 18 |
| EcoT38I | GRGCYC | 1 cut(s) | 216 |
| FaeI | CATG | 1 cut(s) | 118 |
| FaiI | YATR | 3 cut(s) | 87, 116, 147 |
| FaqI | GGGAC | 2 cut(s) | 139, 221 |
| FatI | CATG | 1 cut(s) | 114 |
| FokI | GGATG | 2 cut(s) | 118, 216 |
| FriOI | GRGCYC | 1 cut(s) | 216 |
| HaeIII | GGCC | 2 cut(s) | 66, 75 |
| HapII | CCGG | 1 cut(s) | 233 |
| HgaI | GACGC | 1 cut(s) | 209 |
| Hin1I | GRCGYC | 1 cut(s) | 201 |
| Hin1II | CATG | 1 cut(s) | 118 |
| HinfI | GANTC | 1 cut(s) | 149 |
| HpaII | CCGG | 1 cut(s) | 233 |
| Hpy188I | TCNGA | 3 cut(s) | 37, 97, 199 |
| Hpy188III | TCNNGA | 1 cut(s) | 156 |
| Hpy99I | CGWCG | 4 cut(s) | 104, 107, 110, 113 |
| HpyAV | CCTTC | 4 cut(s) | 56, 214, 226, 249 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 72, 200 |
| HpyF3I | CTNAG | 2 cut(s) | 7, 210 |
| Hsp92I | GRCGYC | 1 cut(s) | 201 |
| Hsp92II | CATG | 1 cut(s) | 118 |
| LmnI | GCTCC | 1 cut(s) | 118 |
| LpnPI | CCDG | 3 cut(s) | 5, 32, 246 |
| LweI | GCATC | 1 cut(s) | 140 |
| MboII | GAAGA | 7 cut(s) | 21, 50, 53, 56, 71, 211, 248 |
| MhlI | GDGCHC | 2 cut(s) | 123, 216 |
| MlyI | GAGTC | 1 cut(s) | 158 |
| MnlI | CCTC | 9 cut(s) | 43, 86, 145, 175, 178, 187, 194, 253, 260 |
| MseI | TTAA | 1 cut(s) | 265 |
| MspI | CCGG | 1 cut(s) | 233 |
| MspR9I | CCNGG | 1 cut(s) | 20 |
| MvaI | CCWGG | 1 cut(s) | 20 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 72, 200 |
| NlaIII | CATG | 1 cut(s) | 118 |
| NlaIV | GGNNCC | 1 cut(s) | 237 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 105 |
| PleI | GAGTC | 1 cut(s) | 157 |
| PpsI | GAGTC | 1 cut(s) | 157 |
| Psp6I | CCWGG | 1 cut(s) | 18 |
| PspGI | CCWGG | 1 cut(s) | 18 |
| PspN4I | GGNNCC | 1 cut(s) | 237 |
| PspPI | GGNCC | 1 cut(s) | 235 |
| SaqAI | TTAA | 1 cut(s) | 265 |
| Sau96I | GGNCC | 1 cut(s) | 235 |
| SchI | GAGTC | 1 cut(s) | 158 |
| ScrFI | CCNGG | 1 cut(s) | 20 |
| SduI | GDGCHC | 2 cut(s) | 123, 216 |
| SetI | ASST | 3 cut(s) | 8, 167, 179 |
| SfaNI | GCATC | 1 cut(s) | 140 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 72 |
| SgeI | CNNG | 8 cut(s) | 26, 31, 32, 127, 152, 168, 199, 245 |
| SinI | GGWCC | 1 cut(s) | 235 |
| StyD4I | CCNGG | 1 cut(s) | 18 |
| Tru1I | TTAA | 1 cut(s) | 265 |
| Tru9I | TTAA | 1 cut(s) | 265 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TspRI | CASTG | 1 cut(s) | 214 |
| VpaK11BI | GGWCC | 1 cut(s) | 235 |