Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0006134

Physical Location & Seq

Genomic Coordinates Forward (+)

7053614 .. 7058359

Gene Structure 4746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0090000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGCCTGGTCCTGCTTTGAACAAATATGGCATTCTTGAACTCACCACAAAACGAGCAACAAAGTTGAAAGCCGCATGGCCTGAGGTTGAACTAACCTTAAATGCCTACTCCCTTTCATGCGATCTGAATCTGGCCAACTGTTTCATGCATGTCTCAACAACCCCATCGCTTGAGGATCGATGTATGGTTGAAAAGGCTAGGCATCTCCTTGAACTCTTGTCCACAAGTCTTGTTCCGCCATATATGGCGTTAGAAATATTCCAAGACGTTAGGCAACAGGAAACCATCAACATAGGATTTCAGCAGGGTGGGATTTGCTCAAAATTTGGGATCAAGAAGGATGACTATCTTAGACGATGGGAATGTCTCTTCTGCTCGCTAAAGGACTTCCTCACAGGAGAAATTATCGGTCGTGGTATTGAGAAGGGGGGATTGTACTACATGGAAATGACAGATGCTGGTGATCTCCGTGCTAGTGAGGTATACCATGTGCAGAAGAGTACTTCAACAAGCAAAGAGAGAGAAAACATATTGCTGTGGCACCAGAGATTGGGTCATCCTTCATTTGGCTACCTGAGGAGTTTACTTCCTACCTTGTTTACAACTTGCAAGGAGTCTGATTTTCAATGTGAAATATGCATCCAAGGAAAGAGTCGCCGTGCTAGCTATCCTCTCAGTCATTCTCGCAGTGTTAGACCCTTTGACTTAATCCACTCAGATGTATGGGGACCTTGTCCAGCTACTCCTTCTGGTATGCAATATTTCCTGTTATTTGTGGATGATTGTACAAGAATGTGTTGGGTTTTCTTGTTAAAGCAAAAGAGCGAAGTTTGTTATGTGTTTCAAATCTTTCATAAAATGATTCAAACCCAATTTCAAACTCCCATCAAAGTCTTCTGCTCAGATAATGGTGGTGAATATGTAAACCATGCCCTCCATCAGTACCTAACCAACCATGGCATTATCCACCAAACCACATGTCCCCAAACTCCCCAACAAAATGGTGTGGCAGAACGAAAAAACCAGCATATCCTTCAAGTTGCCCGTTCCATGCTCATAGGAGCCCACATGCCAAAATATCTATGGGGTGATGCCATCCTTACCACTATTTATCTCCTCAATCGCCTGCCCACACAAGCCCTTAAAGCACTATTGGAGGATGACCATCTACGTCCAAAAACACCACTTGAAGCTCTTGGCCAGTTCTTTACCCTACCACCACTCCATACGCTTCCACCCAAGATCTTTGGTTGTGTGGCTTATAGACACATTCCTCGTAATCAGATAACGAAGTTGAATGCTTGTGGTGAGAAGTGTGTCTTTGTGGGATATGGTTCTACCCAGAAAGGATATAGGTGCTATAATCCCTCTACCCGGAAGGTGTATGTTACCATGGATGTAACATTTTGTGAGCAAGAGTTTTTCTTTTTCCCGAAGACTTCACTTCAGGGGGAGAGCACATCTGGAGAAGAGCAGTCTTCTTCATTAGAAGTACCAGGAATTGTTGTAGAGGAAAGAATTGTTGTACAAGAAAGAACTCAAAGAGATCTTGAAACGCCAACAACAAATGATGATCGACCAAAAGCACCAGCAACAAGAAATGATGATCAACCTCAGTCGATAATGCCAGATTCAGTGTTGCCAGATTCAGTTGAAGACCCCCCTACTCCTACAATACCGGTCCCTATTTCTCATGAGGATGCTCCTGAGGTAAGTTCTAATCCTGAAATCGAATCAGATAGTGTTAATGATGAGCATAGCCCTATTTGTGAGTCTAGTGATATCATACCTAATGAGGTTAATCCTGACACAAGACTCAACACCGAAACAAATGTGTGCCCTAAATATCACTTGCCTAATCGTACAACAAGAGGGAAACCTAAACTCCAGTATGAGCCAAATCCCAAAGCCAAAGCCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF2363

Protein Analysis

640

Amino Acids

72.55

Weight (kDa)

6.3

Isoelectric Point (pI)

49.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
gag_pre-integrs	PF13976	164 - 218	8.3e-15	GAG-pre-integrase domain
rve	PF00665	232 - 331	7.1e-15	Integrase core domain
SH3_retrovirus	PF25597	418 - 478	1.4e-22	Retroviral polymerase SH3-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18420 AT5G18420 AT5G18420 AT5G18420
fragaria_vesca	FvH4_5g20280 FvH4_5g20280
malus_domestica	MD04G1052500.v1.1 MD06G1047700.v1.1
prunus_persica	Prupe.5G058000_v2.0.a1
pyrus_communis	pycom04g04630 pycom06g04070
rosa_chinensis	RchiOBHm_Chr7g0205341
rosa_laevigata	RLG00000003386
rosa_multiflora	Rmu_sc0009725.1_g000008 Rmu_ssc0000004.1_g000021
rosa_roxburghii	Rroxscaffold_3G00252440
rosa_rugosa	Rorug07G0089900 Rorug07G0090000 Rorug07G0090000 Rorug07G0090000 Rorug07G0090100 Rorug07G0090200
rosa_samantha	Rh7AG220600 Rh7BG216800 Rh7CG233600 Rh7DG227500
rosa_wichuraiana	Rw7G019070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	540
AccB7I	CCANNNNNTGG	1 cut(s)	550
AccI	GTMKAC	1 cut(s)	483
AciI	CCGC	2 cut(s)	72, 236
AclWI	GGATC	2 cut(s)	183, 338
AcoI	YGGCCR	2 cut(s)	132, 1198
AcsI	RAATTY	1 cut(s)	323
AcuI	CTGAAG	1 cut(s)	1430
AfaI	GTAC	7 cut(s)	437, 502, 787, 944, 1494, 1527, 1864
AfiI	CCNNNNNNNGG	3 cut(s)	550, 566, 1374
AflIII	ACRYGT	1 cut(s)	977
AgeI	ACCGGT	1 cut(s)	1678
AjnI	CCWGG	2 cut(s)	4, 1495
AluBI	AGCT	3 cut(s)	666, 740, 1193
AluI	AGCT	3 cut(s)	666, 740, 1193
Alw21I	GWGCWC	1 cut(s)	1460
Alw26I	GTCTC	2 cut(s)	157, 371
AlwI	GGATC	2 cut(s)	183, 338
AlwNI	CAGNNNCTG	1 cut(s)	458
AoxI	GGCC	3 cut(s)	77, 132, 1198
ApoI	RAATTY	1 cut(s)	323
ArsI	GACNNNNNNTTYG	2 cut(s)	964, 996
AsiGI	ACCGGT	1 cut(s)	1678
AspS9I	GGNCC	3 cut(s)	8, 728, 1681
AsuC2I	CCSGG	1 cut(s)	1375
AsuHPI	GGTGA	5 cut(s)	34, 473, 926, 1100, 1319
AsuNHI	GCTAGC	1 cut(s)	662
AvaII	GGWCC	3 cut(s)	8, 728, 1681
AxyI	CCTNAGG	3 cut(s)	81, 575, 1707
BaeGI	GKGCMC	1 cut(s)	1841
BalI	TGGCCA	2 cut(s)	134, 1200
BanI	GGYRCC	1 cut(s)	540
BanII	GRGCYC	1 cut(s)	1066
BbsI	GAAGAC	4 cut(s)	886, 1442, 1470, 1662
Bbv12I	GWGCWC	1 cut(s)	1460
BccI	CCATC	7 cut(s)	172, 293, 351, 893, 945, 1103, 1173
BceAI	ACGGC	1 cut(s)	642
BciT130I	CCWGG	2 cut(s)	6, 1497
BclI	TGATCA	1 cut(s)	1606
BcnI	CCSGG	1 cut(s)	1375
BcoDI	GTCTC	2 cut(s)	157, 371
BfaI	CTAG	4 cut(s)	198, 474, 663, 1776
BglII	AGATCT	2 cut(s)	1242, 1546
BisI	GCNGC	1 cut(s)	72
BlsI	GCNGC	1 cut(s)	73
BmcAI	AGTACT	1 cut(s)	502
Bme1390I	CCNGG	3 cut(s)	6, 1375, 1497
Bme18I	GGWCC	3 cut(s)	8, 728, 1681
BmgT120I	GGNCC	3 cut(s)	8, 728, 1681
BmiI	GGNNCC	4 cut(s)	542, 729, 1063, 1683
BmrFI	CCNGG	3 cut(s)	6, 1375, 1497
BmsI	GCATC	5 cut(s)	211, 445, 648, 1081, 1690
BmtI	GCTAGC	1 cut(s)	666
BpiI	GAAGAC	4 cut(s)	886, 1442, 1470, 1662
BpmI	CTGGAG	2 cut(s)	1485, 1871
BpuEI	CTTGAG	1 cut(s)	191
BpuMI	CCSGG	1 cut(s)	1375
Bsa29I	ATCGAT	1 cut(s)	178
BsaBI	GATNNNNATC	3 cut(s)	126, 345, 1164
BsaJI	CCNNGG	3 cut(s)	643, 955, 1392
BsaWI	WCCGGW	1 cut(s)	1678
BsaXI	ACNNNNNCTCC	4 cut(s)	1206, 1236, 1869, 1899
Bsc4I	CCNNNNNNNGG	3 cut(s)	550, 566, 1374
Bse118I	RCCGGY	1 cut(s)	1678
Bse1I	ACTGG	2 cut(s)	1201, 1888
Bse21I	CCTNAGG	3 cut(s)	81, 575, 1707
Bse8I	GATNNNNATC	3 cut(s)	126, 345, 1164
BseBI	CCWGG	2 cut(s)	6, 1497
BseCI	ATCGAT	1 cut(s)	178
BseDI	CCNNGG	3 cut(s)	643, 955, 1392
BseGI	GGATG	8 cut(s)	346, 556, 639, 784, 1095, 1165, 1402, 1705
BseJI	GATNNNNATC	3 cut(s)	126, 345, 1164
BseLI	CCNNNNNNNGG	3 cut(s)	550, 566, 1374
BseMII	CTCAG	7 cut(s)	72, 566, 688, 729, 915, 1628, 1698
BseNI	ACTGG	2 cut(s)	1201, 1888
BseRI	GAGGAG	2 cut(s)	592, 1106
BseSI	GKGCMC	1 cut(s)	1841
BsgI	GTGCAG	1 cut(s)	512
Bsh1285I	CGRYCG	1 cut(s)	412
BshFI	GGCC	3 cut(s)	79, 134, 1200
BshNI	GGYRCC	1 cut(s)	540
BshTI	ACCGGT	1 cut(s)	1678
BshVI	ATCGAT	1 cut(s)	178
BsiEI	CGRYCG	1 cut(s)	412
BsiHKAI	GWGCWC	1 cut(s)	1460
BsiSI	CCGG	2 cut(s)	1375, 1679
BslFI	GGGAC	3 cut(s)	741, 966, 1667
BslI	CCNNNNNNNGG	3 cut(s)	550, 566, 1374
BsmAI	GTCTC	2 cut(s)	157, 371
BsmFI	GGGAC	3 cut(s)	741, 966, 1667
BsmI	GAATGC	2 cut(s)	30, 1303
BsnI	GGCC	3 cut(s)	79, 134, 1200
Bsp1286I	GDGCHC	3 cut(s)	1066, 1460, 1841
Bsp1407I	TGTACA	2 cut(s)	785, 1525
Bsp143I	GATC	8 cut(s)	121, 175, 330, 463, 1242, 1546, 1573, 1606
Bsp19I	CCATGG	2 cut(s)	955, 1392
BspACI	CCGC	2 cut(s)	72, 236
BspANI	GGCC	3 cut(s)	79, 134, 1200
BspCNI	CTCAG	7 cut(s)	73, 567, 687, 728, 914, 1627, 1699
BspDI	ATCGAT	1 cut(s)	178
BspHI	TCATGA	1 cut(s)	1693
BspLI	GGNNCC	4 cut(s)	542, 729, 1063, 1683
BspOI	GCTAGC	1 cut(s)	666
BspPI	GGATC	2 cut(s)	183, 338
BspQI	GCTCTTC	1 cut(s)	1464
BspT107I	GGYRCC	1 cut(s)	540
BsrFI	RCCGGY	1 cut(s)	1678
BsrGI	TGTACA	2 cut(s)	785, 1525
BsrI	ACTGG	2 cut(s)	1201, 1888
BssAI	RCCGGY	1 cut(s)	1678
BssECI	CCNNGG	3 cut(s)	643, 955, 1392
BssMI	GATC	8 cut(s)	121, 175, 330, 463, 1242, 1546, 1573, 1606
BssNAI	GTATAC	1 cut(s)	484
BssT1I	CCWWGG	3 cut(s)	643, 955, 1392
Bst1107I	GTATAC	1 cut(s)	484
Bst2UI	CCWGG	2 cut(s)	6, 1497
Bst4CI	ACNGT	1 cut(s)	140
Bst6I	CTCTTC	3 cut(s)	374, 491, 1464
BstAUI	TGTACA	2 cut(s)	785, 1525
BstC8I	GCNNGC	3 cut(s)	377, 664, 1127
BstDEI	CTNAG	8 cut(s)	81, 350, 575, 674, 715, 901, 1614, 1707
BstDSI	CCRYGG	2 cut(s)	955, 1392
BstF5I	GGATG	8 cut(s)	346, 556, 639, 784, 1095, 1165, 1402, 1705
BstKTI	GATC	8 cut(s)	124, 178, 333, 466, 1245, 1549, 1576, 1609
BstMAI	GTCTC	2 cut(s)	157, 371
BstMBI	GATC	8 cut(s)	121, 175, 330, 463, 1242, 1546, 1573, 1606
BstMCI	CGRYCG	1 cut(s)	412
BstMWI	GCNNNNNNNGC	2 cut(s)	663, 1145
BstNI	CCWGG	2 cut(s)	6, 1497
BstNSI	RCATGY	3 cut(s)	152, 981, 1072
BstSCI	CCNGG	3 cut(s)	4, 1373, 1495
BstSLI	GKGCMC	1 cut(s)	1841
BstV2I	GAAGAC	4 cut(s)	886, 1442, 1470, 1662
BstX2I	RGATCY	2 cut(s)	1242, 1546
BstXI	CCANNNNNNTGG	1 cut(s)	1001
BstYI	RGATCY	2 cut(s)	1242, 1546
BstZ17I	GTATAC	1 cut(s)	484
Bsu15I	ATCGAT	1 cut(s)	178
Bsu36I	CCTNAGG	3 cut(s)	81, 575, 1707
BsuRI	GGCC	3 cut(s)	79, 134, 1200
BsuTUI	ATCGAT	1 cut(s)	178
BtgI	CCRYGG	2 cut(s)	955, 1392
BtgZI	GCGATG	1 cut(s)	150
BtsCI	GGATG	8 cut(s)	346, 556, 639, 784, 1095, 1165, 1402, 1705
BtsI	GCAGTG	1 cut(s)	694
BtsIMutI	CAGTG	2 cut(s)	694, 1641
Cac8I	GCNNGC	3 cut(s)	377, 664, 1127
CaiI	CAGNNNCTG	1 cut(s)	458
CciI	TCATGA	1 cut(s)	1693
Cfr10I	RCCGGY	1 cut(s)	1678
Cfr13I	GGNCC	3 cut(s)	8, 728, 1681
ClaI	ATCGAT	1 cut(s)	178
Csp6I	GTAC	7 cut(s)	436, 501, 786, 943, 1493, 1526, 1863
CspAI	ACCGGT	1 cut(s)	1678
CspCI	CAANNNNNGTGG	2 cut(s)	211, 246
CviQI	GTAC	7 cut(s)	436, 501, 786, 943, 1493, 1526, 1863
DdeI	CTNAG	8 cut(s)	81, 350, 575, 674, 715, 901, 1614, 1707
DpnI	GATC	8 cut(s)	123, 177, 332, 465, 1244, 1548, 1575, 1608
DpnII	GATC	8 cut(s)	121, 175, 330, 463, 1242, 1546, 1573, 1606
EaeI	YGGCCR	2 cut(s)	132, 1198
Eam1104I	CTCTTC	3 cut(s)	374, 491, 1464
EarI	CTCTTC	3 cut(s)	374, 491, 1464
EciI	GGCGGA	1 cut(s)	225
Eco130I	CCWWGG	3 cut(s)	643, 955, 1392
Eco24I	GRGCYC	1 cut(s)	1066
Eco32I	GATATC	1 cut(s)	1783
Eco47I	GGWCC	3 cut(s)	8, 728, 1681
Eco57I	CTGAAG	1 cut(s)	1430
Eco81I	CCTNAGG	3 cut(s)	81, 575, 1707
EcoO109I	RGGNCCY	1 cut(s)	728
EcoRII	CCWGG	2 cut(s)	4, 1495
EcoRV	GATATC	1 cut(s)	1783
EcoT14I	CCWWGG	3 cut(s)	643, 955, 1392
EcoT22I	ATGCAT	2 cut(s)	150, 641
EcoT38I	GRGCYC	1 cut(s)	1066
ErhI	CCWWGG	3 cut(s)	643, 955, 1392
FalI	AAGNNNNNCTT	2 cut(s)	1304, 1336
FaqI	GGGAC	3 cut(s)	741, 966, 1667
FbaI	TGATCA	1 cut(s)	1606
FblI	GTMKAC	1 cut(s)	483
Fnu4HI	GCNGC	1 cut(s)	72
FokI	GGATG	8 cut(s)	353, 543, 626, 791, 1082, 1172, 1409, 1712
FriOI	GRGCYC	1 cut(s)	1066
Fsp4HI	GCNGC	1 cut(s)	72
FspBI	CTAG	4 cut(s)	198, 474, 663, 1776
GluI	GCNGC	1 cut(s)	72
GsuI	CTGGAG	2 cut(s)	1485, 1871
HaeIII	GGCC	3 cut(s)	79, 134, 1200
HapII	CCGG	2 cut(s)	1375, 1679
HinfI	GANTC	9 cut(s)	127, 614, 652, 862, 1631, 1646, 1733, 1772, 1815
HpaII	CCGG	2 cut(s)	1375, 1679
HphI	GGTGA	5 cut(s)	34, 473, 926, 1100, 1319
Hpy166II	GTNNAC	5 cut(s)	222, 484, 584, 600, 925
Hpy188I	TCNGA	6 cut(s)	126, 619, 718, 904, 1284, 1738
Hpy188III	TCNNGA	9 cut(s)	35, 334, 1432, 1464, 1550, 1694, 1706, 1724, 1805
Hpy8I	GTNNAC	5 cut(s)	222, 484, 584, 600, 925
HpyAV	CCTTC	6 cut(s)	331, 418, 570, 756, 1043, 1372
HpyCH4III	ACNGT	1 cut(s)	140
HpyCH4IV	ACGT	2 cut(s)	267, 1171
HpyCH4V	TGCA	5 cut(s)	148, 493, 609, 639, 757
HpyF10VI	GCNNNNNNNGC	2 cut(s)	663, 1145
HpyF3I	CTNAG	8 cut(s)	81, 350, 575, 674, 715, 901, 1614, 1707
HpySE526I	ACGT	2 cut(s)	267, 1171
Ksp22I	TGATCA	1 cut(s)	1606
Kzo9I	GATC	8 cut(s)	121, 175, 330, 463, 1242, 1546, 1573, 1606
LguI	GCTCTTC	1 cut(s)	1464
LmnI	GCTCC	2 cut(s)	1061, 1708
LweI	GCATC	5 cut(s)	211, 445, 648, 1081, 1690
MaeI	CTAG	4 cut(s)	198, 474, 663, 1776
MaeII	ACGT	2 cut(s)	267, 1171
MaeIII	GTNAC	2 cut(s)	1387, 1399
MalI	GATC	8 cut(s)	123, 177, 332, 465, 1244, 1548, 1575, 1608
MboI	GATC	8 cut(s)	121, 175, 330, 463, 1242, 1546, 1573, 1606
MboII	GAAGA	8 cut(s)	361, 508, 886, 1447, 1470, 1473, 1481, 1667
MflI	RGATCY	2 cut(s)	1242, 1546
MhlI	GDGCHC	3 cut(s)	1066, 1460, 1841
MlsI	TGGCCA	2 cut(s)	134, 1200
MluCI	AATT	5 cut(s)	323, 402, 872, 1500, 1518
MluNI	TGGCCA	2 cut(s)	134, 1200
MlyI	GAGTC	4 cut(s)	623, 661, 1781, 1809
Mox20I	TGGCCA	2 cut(s)	134, 1200
Mph1103I	ATGCAT	2 cut(s)	150, 641
MscI	TGGCCA	2 cut(s)	134, 1200
MseI	TTAA	6 cut(s)	98, 707, 812, 1143, 1746, 1800
MslI	CAYNNNNRTG	3 cut(s)	446, 717, 1698
Msp20I	TGGCCA	2 cut(s)	134, 1200
MspI	CCGG	2 cut(s)	1375, 1679
MspR9I	CCNGG	3 cut(s)	6, 1375, 1497
Mva1269I	GAATGC	2 cut(s)	30, 1303
MvaI	CCWGG	2 cut(s)	6, 1497
MwoI	GCNNNNNNNGC	2 cut(s)	663, 1145
NciI	CCSGG	1 cut(s)	1375
NcoI	CCATGG	2 cut(s)	955, 1392
NdeII	GATC	8 cut(s)	121, 175, 330, 463, 1242, 1546, 1573, 1606
NheI	GCTAGC	1 cut(s)	662
NlaIV	GGNNCC	4 cut(s)	542, 729, 1063, 1683
NsiI	ATGCAT	2 cut(s)	150, 641
NspI	RCATGY	3 cut(s)	152, 981, 1072
PagI	TCATGA	1 cut(s)	1693
PciI	ACATGT	1 cut(s)	977
PciSI	GCTCTTC	1 cut(s)	1464
PctI	GAATGC	2 cut(s)	30, 1303
PfeI	GAWTC	5 cut(s)	127, 862, 1631, 1646, 1733
PflFI	GACNNNGTC	1 cut(s)	732
PflMI	CCANNNNNTGG	1 cut(s)	550
PinAI	ACCGGT	1 cut(s)	1678
PkrI	GCNGC	1 cut(s)	73
PleI	GAGTC	4 cut(s)	622, 660, 1780, 1809
PpsI	GAGTC	4 cut(s)	622, 660, 1780, 1809
PpuMI	RGGWCCY	1 cut(s)	728
PscI	ACATGT	1 cut(s)	977
Psp5II	RGGWCCY	1 cut(s)	728
Psp6I	CCWGG	2 cut(s)	4, 1495
PspGI	CCWGG	2 cut(s)	4, 1495
PspN4I	GGNNCC	4 cut(s)	542, 729, 1063, 1683
PspPI	GGNCC	3 cut(s)	8, 728, 1681
PspPPI	RGGWCCY	1 cut(s)	728
PstNI	CAGNNNCTG	1 cut(s)	458
PsuI	RGATCY	2 cut(s)	1242, 1546
PsyI	GACNNNGTC	1 cut(s)	732
RsaI	GTAC	7 cut(s)	437, 502, 787, 944, 1494, 1527, 1864
RsaNI	GTAC	7 cut(s)	436, 501, 786, 943, 1493, 1526, 1863
RseI	CAYNNNNRTG	3 cut(s)	446, 717, 1698
SapI	GCTCTTC	1 cut(s)	1464
SaqAI	TTAA	6 cut(s)	98, 707, 812, 1143, 1746, 1800
SatI	GCNGC	1 cut(s)	72
Sau3AI	GATC	8 cut(s)	121, 175, 330, 463, 1242, 1546, 1573, 1606
Sau96I	GGNCC	3 cut(s)	8, 728, 1681
ScaI	AGTACT	1 cut(s)	502
SchI	GAGTC	4 cut(s)	623, 661, 1781, 1809
ScrFI	CCNGG	3 cut(s)	6, 1375, 1497
SduI	GDGCHC	3 cut(s)	1066, 1460, 1841
SfaNI	GCATC	5 cut(s)	211, 445, 648, 1081, 1690
SinI	GGWCC	3 cut(s)	8, 728, 1681
SmiMI	CAYNNNNRTG	3 cut(s)	446, 717, 1698
SmlI	CTYRAG	1 cut(s)	170
SmoI	CTYRAG	1 cut(s)	170
Sse9I	AATT	5 cut(s)	323, 402, 872, 1500, 1518
SsiI	CCGC	2 cut(s)	72, 236
SspI	AATATT	2 cut(s)	258, 761
SspMI	CTAG	4 cut(s)	198, 474, 663, 1776
StyD4I	CCNGG	3 cut(s)	4, 1373, 1495
StyI	CCWWGG	3 cut(s)	643, 955, 1392
TaaI	ACNGT	1 cut(s)	140
TaiI	ACGT	2 cut(s)	270, 1174
TaqI	TCGA	4 cut(s)	178, 1576, 1619, 1731
TaqII	GACCGA	1 cut(s)	398
TasI	AATT	5 cut(s)	323, 402, 872, 1500, 1518
TatI	WGTACW	4 cut(s)	435, 500, 785, 1525
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	5 cut(s)	127, 862, 1631, 1646, 1733
Tru1I	TTAA	6 cut(s)	98, 707, 812, 1143, 1746, 1800
Tru9I	TTAA	6 cut(s)	98, 707, 812, 1143, 1746, 1800
TscAI	CASTG	2 cut(s)	694, 1641
TspDTI	ATGAA	5 cut(s)	105, 133, 552, 842, 1473
TspGWI	ACGGA	1 cut(s)	458
TspRI	CASTG	2 cut(s)	694, 1641
Tth111I	GACNNNGTC	1 cut(s)	732
Van91I	CCANNNNNTGG	1 cut(s)	550
VpaK11BI	GGWCC	3 cut(s)	8, 728, 1681
XapI	RAATTY	1 cut(s)	323
XceI	RCATGY	3 cut(s)	152, 981, 1072
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1080
XmiI	GTMKAC	1 cut(s)	483
XspI	CTAG	4 cut(s)	198, 474, 663, 1776
ZrmI	AGTACT	1 cut(s)	502
Zsp2I	ATGCAT	2 cut(s)	150, 641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.