Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001712

Physical Location & Seq

Genomic Coordinates Forward (+)

11683799 .. 11685799

Gene Structure 2001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0147500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGAGGCTTCCCCTGCTCTCTCCCGCATCGGCCTGGCCGGCCTGGCCGTCATGGGCCAGAACCTCGCCCTCAACATCGCCGAGAAAGGCTTCCCCATCTCCGTCTACAACCGCACCACCTCCAAGGTCGACGAGACCGTCGATCGCGCCATGAGCGAAGGCAACCTTCCTCTCTCCGGTCAGTACACCCCCAAAGACTTCGTCCTCTCCCTCCAGCGCCCCAGATCCGTCATCATTCTCGTCAAGGCCGGCGCCCCCGTCGACCAGACCATCGCCGCCCTGTCCGCCTACATGGAGCCCGGCGACGCCATCATCGACGGCGGCAACGAGTGGTACGAGAACACCGAGCGCCGCATCCAGGAGGCCTCCGCCAAGGGCCTCCTCTACCTCGGCATGGGAGTCTCCGGCGGCGAGGAGGGCGCCCGCCACGGCCCCAGTCTCATGCCCGGCGGGTCCCACCAGGCGTACTCCAACGTCCAGGATATTCTCCACAAGGTCGCCGCCCAGGTGGAGGACGGCCCGTGCGTGACGTACATCGGCCAAGGCGGGTCCGGTAACTTCGTCAAGATGGTCCACAACGGAATCGAGTACGGCGATATGCAGCTGATTTCCGAGGCCTACGACGTGCTGAAGAACATCGGCGGGCTTTCGAATTCGGAGCTGGCTGAAATCTTTGACGAGTGGAACAGAGGGGAGCTGGAGAGCTTCTTGGTTGAGATTACCGCCGATATTTTCAAGGTGAAAGACGATTTGGCCGATGGGTTTTTGGTGGATAAGTTGCTGGACAAGACGGGGATGAAGGGCACCGGGAAATGGACGGTTCAGCAGGCTGCTGAGCTTTCCGTGGCGGCGCCGACTATTGCCGCGTCGTTGGATTGTAGATACTTGAGTGGATTGAAGGAGGAGAGGGAGAGCGCCGAGGAGGCTTTGAAGCAAGCCGGGTTCAAGGAGGAGATTGGGAATGTGACTAGTGGGATTGATAAGAAGAGGTTGATTGATGATGTGAGGCAGGCTTTGTATGCTTCCAAGATTTGTAGCTATGCTCAGGGGATGAACTTGTTGAGGGCTAAGAGTATGGAGAAGGGTTGGAATTTGAATTTGGGGGAATTGGCTAGGATTTGGAAGGGTGGGTGTATTATTAGAGCCGTGTTCTTGGATAGGATTAAGAATGCGTATCAGAGGAATCAGGGTTTGCCTAACTTGGTTGTTGATCCCGACTTTGCTAAGGAAATGGTGCAGAGGCAAGCTGCGTGGAGGAGAGTTGTGGGGTTGGCTGTGGCAGCCGGGATTAGTACTCCGGGAATGTGTGCTAGTTTGTCCTACTTTGATACATATAGGCGTGCTAGGCTTCCGGCTAATCTTGTTCAGGCTCAAAGAGACTTGTTTGGAGCTCATACTTATGAGAGGGTTGATCGCCCTGGCTCATTTCATACAGAGTGGACTAAACTTGCTCAAAAGAGTTCGGGTGTTGGGGCTCTCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1685

Protein Analysis

494

Amino Acids

53.7

Weight (kDa)

5.73

Isoelectric Point (pI)

28.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_2	PF03446	9 - 180	1.6e-46	NAD binding domain of 6-phosphogluconate dehydrogenase
6PGD	PF00393	185 - 480	7.2e-125	6-phosphogluconate dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT1G05870 AT2G31560 AT2G31560 AT2G31560 AT2G43340
fragaria_vesca	FvH4_4g11250
prunus_persica	Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1 Prupe.1G189800_v2.0.a1
pyrus_communis	pycom04g03180
rosa_chinensis	RchiOBHm_Chr0c40g0503391 RchiOBHm_Chr4g0407341
rosa_laevigata	RLG00000008732
rosa_multiflora	Rmu_co8278391.1_g000001
rosa_roxburghii	Rroxscaffold_5G00351890
rosa_rugosa	Rorug04G0078800 Rorug04G0078800 Rorug04G0078800 Rorug04G0287500 Rorug06G0154700 Rorug07G0147500
rosa_samantha	Rh4AG143600 Rh4BG141300 Rh4CG149900 Rh4DG137500 Rh6BG301800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	137
AccB1I	GGYRCC	4 cut(s)	251, 419, 803, 850
AccI	GTMKAC	3 cut(s)	105, 129, 261
AccII	CGCG	2 cut(s)	147, 866
AclWI	GGATC	2 cut(s)	219, 1205
AcoI	YGGCCR	4 cut(s)	36, 45, 538, 753
AcsI	RAATTY	3 cut(s)	652, 1090, 1096
AcuI	CTGAAG	1 cut(s)	650
AcyI	GRCGYC	4 cut(s)	252, 306, 420, 851
AfaI	GTAC	6 cut(s)	185, 335, 467, 533, 590, 1294
AfiI	CCNNNNNNNGG	5 cut(s)	176, 358, 394, 511, 813
AgsI	TTSAA	5 cut(s)	736, 898, 931, 946, 1096
AhlI	ACTAGT	1 cut(s)	968
AjiI	CACGTC	1 cut(s)	625
AjnI	CCWGG	7 cut(s)	33, 42, 357, 459, 477, 504, 1417
AjuI	GAANNNNNNNTTGG	4 cut(s)	734, 766, 1082, 1114
AluBI	AGCT	8 cut(s)	604, 661, 697, 705, 838, 1038, 1247, 1391
AluI	AGCT	8 cut(s)	604, 661, 697, 705, 838, 1038, 1247, 1391
Alw21I	GWGCWC	1 cut(s)	1393
Alw26I	GTCTC	4 cut(s)	128, 406, 443, 1371
AlwI	GGATC	2 cut(s)	219, 1205
ApeKI	GCWGC	4 cut(s)	601, 830, 1247, 1280
ApoI	RAATTY	3 cut(s)	652, 1090, 1096
ArsI	GACNNNNNNTTYG	2 cut(s)	186, 218
Asp700I	GAANNNNTTC	1 cut(s)	89
AspLEI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 853, 917
AspS9I	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 549, 571
AsuC2I	CCSGG	6 cut(s)	300, 447, 808, 940, 1285, 1299
AsuHPI	GGTGA	1 cut(s)	751
AsuII	TTCGAA	1 cut(s)	650
AvaII	GGWCC	3 cut(s)	453, 549, 571
BaeGI	GKGCMC	1 cut(s)	806
BaeI	ACNNNNGTAYC	2 cut(s)	874, 907
BanI	GGYRCC	4 cut(s)	251, 419, 803, 850
BanII	GRGCYC	3 cut(s)	300, 1393, 1477
Bbv12I	GWGCWC	1 cut(s)	1393
BbvI	GCAGC	4 cut(s)	613, 817, 1234, 1292
BccI	CCATC	5 cut(s)	104, 278, 317, 562, 752
BceAI	ACGGC	6 cut(s)	32, 334, 445, 532, 607, 1130
BciT130I	CCWGG	7 cut(s)	35, 44, 359, 461, 479, 506, 1419
BcnI	CCSGG	6 cut(s)	300, 447, 808, 940, 1285, 1299
BcoDI	GTCTC	4 cut(s)	128, 406, 443, 1371
BcuI	ACTAGT	1 cut(s)	968
BfaI	CTAG	4 cut(s)	969, 1113, 1311, 1344
BfoI	RGCGCY	6 cut(s)	220, 255, 352, 423, 854, 918
BglI	GCCNNNNNGGC	3 cut(s)	39, 44, 923
BlpI	GCTNAGC	1 cut(s)	834
BmcAI	AGTACT	1 cut(s)	1294
Bme18I	GGWCC	3 cut(s)	453, 549, 571
BmgBI	CACGTC	1 cut(s)	625
BmgT120I	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 549, 571
BmiI	GGNNCC	9 cut(s)	253, 297, 421, 433, 454, 455, 550, 805, 852
BmrI	ACTGGG	1 cut(s)	429
BmsI	GCATC	2 cut(s)	36, 363
BmuI	ACTGGG	1 cut(s)	429
BpmI	CTGGAG	2 cut(s)	197, 719
Bpu10I	CCTNAGC	2 cut(s)	1044, 1224
Bpu1102I	GCTNAGC	1 cut(s)	834
Bpu14I	TTCGAA	1 cut(s)	650
BpuEI	CTTGAG	1 cut(s)	907
BpuMI	CCSGG	6 cut(s)	300, 447, 808, 940, 1285, 1299
BsaHI	GRCGYC	4 cut(s)	252, 306, 420, 851
BsaI	GGTCTC	1 cut(s)	128
BsaWI	WCCGGW	2 cut(s)	176, 551
Bsc4I	CCNNNNNNNGG	5 cut(s)	176, 358, 394, 511, 813
Bse118I	RCCGGY	2 cut(s)	38, 248
Bse1I	ACTGG	1 cut(s)	435
BseBI	CCWGG	7 cut(s)	35, 44, 359, 461, 479, 506, 1419
BseGI	GGATG	3 cut(s)	354, 801, 1056
BseLI	CCNNNNNNNGG	5 cut(s)	176, 358, 394, 511, 813
BseMII	CTCAG	2 cut(s)	825, 1058
BseNI	ACTGG	1 cut(s)	435
BseRI	GAGGAG	6 cut(s)	371, 428, 917, 935, 965, 1270
BseSI	GKGCMC	1 cut(s)	806
BseXI	GCAGC	4 cut(s)	613, 817, 1234, 1292
BsgI	GTGCAG	1 cut(s)	1256
Bsh1236I	CGCG	2 cut(s)	147, 866
Bsh1285I	CGRYCG	1 cut(s)	145
BshNI	GGYRCC	4 cut(s)	251, 419, 803, 850
BsiEI	CGRYCG	1 cut(s)	145
BsiHKAI	GWGCWC	1 cut(s)	1393
BslFI	GGGAC	1 cut(s)	439
BslI	CCNNNNNNNGG	5 cut(s)	176, 358, 394, 511, 813
BsmAI	GTCTC	4 cut(s)	128, 406, 443, 1371
BsmFI	GGGAC	1 cut(s)	439
BsmI	GAATGC	1 cut(s)	1174
Bso31I	GGTCTC	1 cut(s)	128
Bsp119I	TTCGAA	1 cut(s)	650
Bsp1286I	GDGCHC	4 cut(s)	300, 806, 1393, 1477
Bsp143I	GATC	4 cut(s)	142, 224, 1210, 1411
Bsp1720I	GCTNAGC	1 cut(s)	834
BspCNI	CTCAG	2 cut(s)	826, 1057
BspFNI	CGCG	2 cut(s)	147, 866
BspLI	GGNNCC	9 cut(s)	253, 297, 421, 433, 454, 455, 550, 805, 852
BspPI	GGATC	2 cut(s)	219, 1205
BspT104I	TTCGAA	1 cut(s)	650
BspT107I	GGYRCC	4 cut(s)	251, 419, 803, 850
BspTNI	GGTCTC	1 cut(s)	128
BsrFI	RCCGGY	2 cut(s)	38, 248
BsrI	ACTGG	1 cut(s)	435
BssAI	RCCGGY	2 cut(s)	38, 248
BssMI	GATC	4 cut(s)	142, 224, 1210, 1411
BssNI	GRCGYC	4 cut(s)	252, 306, 420, 851
BssT1I	CCWWGG	3 cut(s)	123, 372, 541
Bst2UI	CCWGG	7 cut(s)	35, 44, 359, 461, 479, 506, 1419
Bst4CI	ACNGT	2 cut(s)	139, 820
Bst6I	CTCTTC	1 cut(s)	980
BstACI	GRCGYC	4 cut(s)	252, 306, 420, 851
BstBI	TTCGAA	1 cut(s)	650
BstDEI	CTNAG	4 cut(s)	834, 1044, 1068, 1224
BstDSI	CCRYGG	2 cut(s)	427, 843
BstF5I	GGATG	3 cut(s)	354, 801, 1056
BstFNI	CGCG	2 cut(s)	147, 866
BstH2I	RGCGCY	6 cut(s)	220, 255, 352, 423, 854, 918
BstHHI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 853, 917
BstKTI	GATC	4 cut(s)	145, 227, 1213, 1414
BstMAI	GTCTC	4 cut(s)	128, 406, 443, 1371
BstMBI	GATC	4 cut(s)	142, 224, 1210, 1411
BstMCI	CGRYCG	1 cut(s)	145
BstNI	CCWGG	7 cut(s)	35, 44, 359, 461, 479, 506, 1419
BstSLI	GKGCMC	1 cut(s)	806
BstUI	CGCG	2 cut(s)	147, 866
BstV1I	GCAGC	4 cut(s)	613, 817, 1234, 1292
BstX2I	RGATCY	1 cut(s)	224
BstYI	RGATCY	1 cut(s)	224
BtgI	CCRYGG	2 cut(s)	427, 843
BtgZI	GCGATG	2 cut(s)	61, 256
BtrI	CACGTC	1 cut(s)	625
BtsCI	GGATG	3 cut(s)	354, 801, 1056
CfoI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 853, 917
Cfr10I	RCCGGY	2 cut(s)	38, 248
Cfr13I	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 549, 571
CseI	GACGC	2 cut(s)	314, 855
Csp6I	GTAC	6 cut(s)	184, 334, 466, 532, 589, 1293
CspCI	CAANNNNNGTGG	2 cut(s)	1232, 1267
CviAII	CATG	5 cut(s)	52, 151, 292, 394, 442
CviQI	GTAC	6 cut(s)	184, 334, 466, 532, 589, 1293
DdeI	CTNAG	4 cut(s)	834, 1044, 1068, 1224
DinI	GGCGCC	3 cut(s)	253, 421, 852
DpnI	GATC	4 cut(s)	144, 226, 1212, 1413
DpnII	GATC	4 cut(s)	142, 224, 1210, 1411
DrdI	GACNNNNNNGTC	1 cut(s)	137
DseDI	GACNNNNNNGTC	1 cut(s)	137
EaeI	YGGCCR	4 cut(s)	36, 45, 538, 753
Eam1104I	CTCTTC	1 cut(s)	980
EarI	CTCTTC	1 cut(s)	980
EciI	GGCGGA	2 cut(s)	274, 358
Ecl136II	GAGCTC	1 cut(s)	1391
Eco130I	CCWWGG	3 cut(s)	123, 372, 541
Eco147I	AGGCCT	2 cut(s)	365, 617
Eco24I	GRGCYC	3 cut(s)	300, 1393, 1477
Eco31I	GGTCTC	1 cut(s)	128
Eco47I	GGWCC	3 cut(s)	453, 549, 571
Eco53kI	GAGCTC	1 cut(s)	1391
Eco57I	CTGAAG	1 cut(s)	650
EcoICRI	GAGCTC	1 cut(s)	1391
EcoO109I	RGGNCCY	2 cut(s)	376, 453
EcoRI	GAATTC	1 cut(s)	652
EcoRII	CCWGG	7 cut(s)	33, 42, 357, 459, 477, 504, 1417
EcoT14I	CCWWGG	3 cut(s)	123, 372, 541
EcoT38I	GRGCYC	3 cut(s)	300, 1393, 1477
EgeI	GGCGCC	3 cut(s)	253, 421, 852
EheI	GGCGCC	3 cut(s)	253, 421, 852
ErhI	CCWWGG	3 cut(s)	123, 372, 541
FaeI	CATG	5 cut(s)	55, 154, 295, 397, 445
FalI	AAGNNNNNCTT	2 cut(s)	150, 182
FaqI	GGGAC	1 cut(s)	439
FatI	CATG	5 cut(s)	51, 150, 291, 393, 441
FauI	CCCGC	5 cut(s)	32, 431, 443, 539, 635
FblI	GTMKAC	3 cut(s)	105, 129, 261
FokI	GGATG	3 cut(s)	341, 808, 1063
FriOI	GRGCYC	3 cut(s)	300, 1393, 1477
FseI	GGCCGGCC	1 cut(s)	42
FspBI	CTAG	4 cut(s)	969, 1113, 1311, 1344
GlaI	GCGC	7 cut(s)	148, 218, 253, 350, 421, 852, 916
GsuI	CTGGAG	2 cut(s)	197, 719
HaeII	RGCGCY	6 cut(s)	220, 255, 352, 423, 854, 918
HgaI	GACGC	2 cut(s)	314, 855
HhaI	GCGC	7 cut(s)	149, 219, 254, 351, 422, 853, 917
Hin1I	GRCGYC	4 cut(s)	252, 306, 420, 851
Hin1II	CATG	5 cut(s)	55, 154, 295, 397, 445
Hin6I	GCGC	7 cut(s)	147, 217, 252, 349, 420, 851, 915
HinP1I	GCGC	7 cut(s)	147, 217, 252, 349, 420, 851, 915
HincII	GTYRAC	2 cut(s)	130, 262
HindII	GTYRAC	2 cut(s)	130, 262
HinfI	GANTC	3 cut(s)	399, 582, 1183
HphI	GGTGA	1 cut(s)	751
Hpy166II	GTNNAC	6 cut(s)	106, 130, 186, 262, 574, 1440
Hpy188I	TCNGA	3 cut(s)	613, 658, 1179
Hpy188III	TCNNGA	2 cut(s)	565, 1214
Hpy8I	GTNNAC	6 cut(s)	106, 130, 186, 262, 574, 1440
Hpy99I	CGWCG	7 cut(s)	134, 143, 263, 308, 320, 626, 871
HpyAV	CCTTC	6 cut(s)	152, 176, 793, 892, 1075, 1117
HpyCH4III	ACNGT	2 cut(s)	139, 820
HpyCH4IV	ACGT	3 cut(s)	474, 530, 624
HpyCH4V	TGCA	2 cut(s)	601, 1237
HpyF3I	CTNAG	4 cut(s)	834, 1044, 1068, 1224
HpySE526I	ACGT	3 cut(s)	474, 530, 624
Hsp92I	GRCGYC	4 cut(s)	252, 306, 420, 851
Hsp92II	CATG	5 cut(s)	55, 154, 295, 397, 445
HspAI	GCGC	7 cut(s)	147, 217, 252, 349, 420, 851, 915
KasI	GGCGCC	3 cut(s)	251, 419, 850
KflI	GGGWCCC	1 cut(s)	453
KroI	GCCGGC	2 cut(s)	38, 248
KroNI	GCCGGC	2 cut(s)	40, 250
Kzo9I	GATC	4 cut(s)	142, 224, 1210, 1411
LmnI	GCTCC	4 cut(s)	295, 658, 694, 1388
Lsp1109I	GCAGC	4 cut(s)	613, 817, 1234, 1292
LweI	GCATC	2 cut(s)	36, 363
MaeI	CTAG	4 cut(s)	969, 1113, 1311, 1344
MaeII	ACGT	3 cut(s)	474, 530, 624
MaeIII	GTNAC	3 cut(s)	526, 554, 964
MalI	GATC	4 cut(s)	144, 226, 1212, 1413
MboI	GATC	4 cut(s)	142, 224, 1210, 1411
MboII	GAAGA	2 cut(s)	643, 997
MfeI	CAATTG	1 cut(s)	1480
MflI	RGATCY	1 cut(s)	224
MhlI	GDGCHC	4 cut(s)	300, 806, 1393, 1477
MluCI	AATT	5 cut(s)	652, 1090, 1096, 1106, 1480
Mly113I	GGCGCC	3 cut(s)	252, 420, 851
MlyI	GAGTC	1 cut(s)	408
MmeI	TCCRAC	3 cut(s)	495, 852, 1067
MroNI	GCCGGC	2 cut(s)	38, 248
MroXI	GAANNNNTTC	1 cut(s)	89
MseI	TTAA	1 cut(s)	1164
MslI	CAYNNNNRTG	1 cut(s)	1398
MspA1I	CMGCKG	1 cut(s)	604
MunI	CAATTG	1 cut(s)	1480
Mva1269I	GAATGC	1 cut(s)	1174
MvaI	CCWGG	7 cut(s)	35, 44, 359, 461, 479, 506, 1419
MvnI	CGCG	2 cut(s)	147, 866
NaeI	GCCGGC	2 cut(s)	40, 250
NarI	GGCGCC	3 cut(s)	252, 420, 851
NciI	CCSGG	6 cut(s)	300, 447, 808, 940, 1285, 1299
NdeII	GATC	4 cut(s)	142, 224, 1210, 1411
NgoMIV	GCCGGC	2 cut(s)	38, 248
NlaIII	CATG	5 cut(s)	55, 154, 295, 397, 445
NlaIV	GGNNCC	9 cut(s)	253, 297, 421, 433, 454, 455, 550, 805, 852
NmeAIII	GCCGAG	3 cut(s)	106, 369, 943
NmuCI	GTSAC	2 cut(s)	526, 964
NspV	TTCGAA	1 cut(s)	650
PceI	AGGCCT	2 cut(s)	365, 617
PcsI	WCGNNNNNNNCGW	9 cut(s)	135, 138, 312, 324, 333, 342, 522, 591, 753
PctI	GAATGC	1 cut(s)	1174
PdiI	GCCGGC	2 cut(s)	40, 250
PdmI	GAANNNNTTC	1 cut(s)	89
PfeI	GAWTC	2 cut(s)	582, 1183
PflFI	GACNNNGTC	1 cut(s)	200
PfoI	TCCNGGA	3 cut(s)	357, 477, 1297
Ple19I	CGATCG	1 cut(s)	145
PleI	GAGTC	1 cut(s)	407
PluTI	GGCGCC	3 cut(s)	255, 423, 854
PpsI	GAGTC	1 cut(s)	407
PpuMI	RGGWCCY	1 cut(s)	453
Psp124BI	GAGCTC	1 cut(s)	1393
Psp5II	RGGWCCY	1 cut(s)	453
Psp6I	CCWGG	7 cut(s)	33, 42, 357, 459, 477, 504, 1417
PspGI	CCWGG	7 cut(s)	33, 42, 357, 459, 477, 504, 1417
PspN4I	GGNNCC	9 cut(s)	253, 297, 421, 433, 454, 455, 550, 805, 852
PspPI	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 549, 571
PspPPI	RGGWCCY	1 cut(s)	453
PsuI	RGATCY	1 cut(s)	224
PsyI	GACNNNGTC	1 cut(s)	200
PvuI	CGATCG	1 cut(s)	145
PvuII	CAGCTG	1 cut(s)	604
RigI	GGCCGGCC	1 cut(s)	42
RsaI	GTAC	6 cut(s)	185, 335, 467, 533, 590, 1294
RsaNI	GTAC	6 cut(s)	184, 334, 466, 532, 589, 1293
RseI	CAYNNNNRTG	1 cut(s)	1398
SacI	GAGCTC	1 cut(s)	1393
SalI	GTCGAC	2 cut(s)	128, 260
SaqAI	TTAA	1 cut(s)	1164
Sau3AI	GATC	4 cut(s)	142, 224, 1210, 1411
Sau96I	GGNCC	7 cut(s)	55, 376, 431, 453, 518, 549, 571
ScaI	AGTACT	1 cut(s)	1294
SchI	GAGTC	1 cut(s)	408
SduI	GDGCHC	4 cut(s)	300, 806, 1393, 1477
SfaNI	GCATC	2 cut(s)	36, 363
SfiI	GGCCNNNNNGGCC	2 cut(s)	39, 44
SfoI	GGCGCC	3 cut(s)	253, 421, 852
SfuI	TTCGAA	1 cut(s)	650
SinI	GGWCC	3 cut(s)	453, 549, 571
SmiMI	CAYNNNNRTG	1 cut(s)	1398
SmlI	CTYRAG	1 cut(s)	886
SmoI	CTYRAG	1 cut(s)	886
SpeI	ACTAGT	1 cut(s)	968
Sse9I	AATT	5 cut(s)	652, 1090, 1096, 1106, 1480
SseBI	AGGCCT	2 cut(s)	365, 617
SspDI	GGCGCC	3 cut(s)	251, 419, 850
SspMI	CTAG	4 cut(s)	969, 1113, 1311, 1344
SstI	GAGCTC	1 cut(s)	1393
StuI	AGGCCT	2 cut(s)	365, 617
StyI	CCWWGG	3 cut(s)	123, 372, 541
TaaI	ACNGT	2 cut(s)	139, 820
TaiI	ACGT	3 cut(s)	477, 533, 627
TaqI	TCGA	6 cut(s)	129, 141, 261, 315, 585, 650
TasI	AATT	5 cut(s)	652, 1090, 1096, 1106, 1480
TatI	WGTACW	2 cut(s)	183, 1292
TauI	GCSGC	7 cut(s)	278, 324, 354, 411, 503, 851, 866
TfiI	GAWTC	2 cut(s)	582, 1183
Tru1I	TTAA	1 cut(s)	1164
Tru9I	TTAA	1 cut(s)	1164
TseFI	GTSAC	2 cut(s)	526, 964
TseI	GCWGC	4 cut(s)	601, 830, 1247, 1280
Tsp45I	GTSAC	2 cut(s)	526, 964
TspDTI	ATGAA	3 cut(s)	812, 1067, 1418
TspGWI	ACGGA	4 cut(s)	91, 217, 594, 832
Tth111I	GACNNNGTC	1 cut(s)	200
VpaK11BI	GGWCC	3 cut(s)	453, 549, 571
XapI	RAATTY	3 cut(s)	652, 1090, 1096
XmiI	GTMKAC	3 cut(s)	105, 129, 261
XmnI	GAANNNNTTC	1 cut(s)	89
XspI	CTAG	4 cut(s)	969, 1113, 1311, 1344
ZrmI	AGTACT	1 cut(s)	1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.