Rorug07G0174000

Hydroxyproline-rich glycoprotein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0006684
Physical Location & Seq
Reverse (-)
14274638 .. 14279294
4657 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0174000.1

Sequence Viewer

Length: 2118 bp
ATGGCGGCGCGCGACTCGCAGGCGAGCATGTACCGACTGCTGCTGGACCGGTGCCAGAGCTTGGAGGCCAGCCACGTCAGACTCAGAGCCGAGTTCCATGAGCTGCAGCACCACAACGAGAAGACCGAGGAGGAGGAGGAGGAGGATGATGATGCGATGCTGACGTCAGAGTTCTCGGTTCCGCACCGTGTCCGGGGGTTCTTCCTGTCCGGGAGTCCGTACCGGAGCATACTGGACAACATGGGCCACGCCGTCCACGTCTGCACGGCCTCCGCCGGAGAGATCCAGTACTGGAATCGTGCGGCTGAGAATCTCTATGGATGGAAGGACTATGAAGCCCTTGGACAAAGGGCTGCTGAGCTCCTCATTGCTGAAGAGTACTATGCACAGTTAAAGAGAATCATGGAAAGATTGAATATTGGCTTATCATGGTCAGGTCAGTTTCCTTTCAAAAAGAGGTCGGGAGAGATATTTATGGCAATGGTGACAAAAAGCCCATTGTATGAGGATGGTGAGCTTGTTGGTATCATCACTGTTTCAAGTGATGCGGCATTGTTTAATAGAGTTGAAGCAGAAAATCTGAGAACATCCAAGGATCATGCCAATGGCCAACATAAGGGATGGCAGTTAAACTGGAACAAGAGCCAATTACACCCTGGCCGGCCACCGGTCGCACCAGTGCCACAGATTGCATCGTCTGTTTCCAATCTGGCCTCCAAACTGCTATCACGAAATGATGATAATGGATGCAATCCAAGTGAGGTTAACAAGGCAAGGGAGAACTCTACAGCAGACACTGGAAAAGCTAACTTAGAGAAAGCTGGTACACTAGCGTCTAAGTTCTTGGCAAAGTTGAACATTAAAGGAGCCAACAAAGGTGGGAAAGAAGATTATGAAACATCTCAAAAAAATGGCAGAAATGATGCTAATCTATTTAGCAATGAAGTGACAAAGCAGCCTAATTCCCCTAGAAATTCAAACGCATCAAGTGTATATGGGCATAAGAATCCGATTGATTTAGATGAGAGTTCTGTCTTAGCCTCTTCAAGGGAGTGCAATGAGTATATTGGGTTGCATAGACCAAATCATCTATTGCCAAAATTACACTATGCAAATGATCCGGGGCCTGAAGAATGCAACTTGAATGCTTCAGAGGTAGAAGATGCAATGCAAAAACAACCAGATGGTCAACCATTACCTAGTTCAGCAGAGAGCACTCGCAGCCCCAGTAGTTCATCAAGCAAAGGGGTTAATAATTCTACTTCCATAGGAGGTTGTGAGATTCGTTGGGAGGACTTACATTTGGGAGAGGAAATTGGACAAGGTTCCTGTGCTATTGTATATCGTGGAATCTGGAATGGATCGGATGTTGCCATTAAGGTTTACTTTAAAAATGAATACAGTGAGGGGGTTTTGCATGACTACAGAAAGGAGATTGATATAATGAAAAGATTGCGGCATCCTAATGTGCTGCTATTTATGGGAGCAGTATATTCACAAGAACGTCTAGCTATTGTCACAGAGTACCTACCTAGGGGAAGTCTTTTCAGACAACTTCACAAAAACAATCAAGCATTGGATATTAAACGACGTATGAGGATGGCCCTTGATGTTGCGAGAGGTATGAATTACTTGCATCGTAGAAATCCACCTATAGTTCACAGAGACTTAAAATCGTCTAACTTGCTGGTTGATAAGAACTGGACTGTCAAGGTTGGAGACTTTGGTCTGTCGAAGTTAAAGAACGCAACCTTCTTGACTGCAAAATCTGGGAGAGGAACACCTCAGTGGATGGCACCTGAAGTCCTCCGAAATGAACCTTCAAATGAGAAGTCTGATGTATTTAGCTTTGGTGTCATCCTTTGGGAACTAATGACTGTATCGGTCCCATGGAATAACCTCAATCCCTTGCAGGTTGTTGGAGTTGTAGGCTTCATGGATAGAAGATTAGACATACCAGAAGGCCTCAATCCCGAAGTAGTATCCATTATTGAAGACTGTTGGCGAAGTGACCCGGGACAGCGTCCATCGTTTGAAGATGTGATTCAGAGAATGAAGGACGTAGTTATCAAAGTTGAAGCAGCTTCAGTAAGAAGAAAGTTCAAACCCTTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

705

Amino Acids

79.18

Weight (kDa)

6.72

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 74 - 179 3.6e-10 PAS fold
PAS_4 PF08448 78 - 182 3.3e-06 PAS fold
PAS_9 PF13426 87 - 182 3.5e-08 PAS domain
PK_Tyr_Ser-Thr PF07714 433 - 684 2.2e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 434 - 683 3.9e-54 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 167
Acc36I ACCTGC 1 cut(s) 1903
AccB1I GGYRCC 2 cut(s) 51, 1795
AccB7I CCANNNNNTGG 1 cut(s) 61
AccII CGCG 2 cut(s) 10, 12
AciI CCGC 6 cut(s) 5, 182, 273, 302, 548, 1456
AclWI GGATC 4 cut(s) 277, 603, 1112, 1369
AcoI YGGCCR 3 cut(s) 607, 658, 662
AcsI RAATTY 1 cut(s) 973
AcuI CTGAAG 5 cut(s) 393, 1134, 1149, 1821, 2070
AcyI GRCGYC 1 cut(s) 164
AfaI GTAC 6 cut(s) 32, 221, 290, 380, 826, 1526
AfiI CCNNNNNNNGG 6 cut(s) 61, 193, 616, 667, 1047, 1534
AgeI ACCGGT 2 cut(s) 48, 667
AjiI CACGTC 2 cut(s) 76, 259
AjnI CCWGG 1 cut(s) 655
AleI CACNNNNGTG 1 cut(s) 1786
AluBI AGCT 9 cut(s) 60, 103, 361, 517, 806, 821, 1511, 1848, 2084
AluI AGCT 9 cut(s) 60, 103, 361, 517, 806, 821, 1511, 1848, 2084
Alw21I GWGCWC 2 cut(s) 363, 1217
Alw26I GTCTC 2 cut(s) 1659, 1713
AlwI GGATC 4 cut(s) 277, 603, 1112, 1369
AlwNI CAGNNNCTG 1 cut(s) 797
Ama87I CYCGRG 1 cut(s) 2014
ApeKI GCWGC 8 cut(s) 40, 103, 106, 353, 955, 1221, 1471, 2081
ApoI RAATTY 1 cut(s) 973
ArsI GACNNNNNNTTYG 2 cut(s) 1817, 1849
AsiGI ACCGGT 2 cut(s) 48, 667
AspA2I CCTAGG 1 cut(s) 1532
AspLEI GCGC 2 cut(s) 10, 12
AspS9I GGNCC 5 cut(s) 46, 244, 1124, 1603, 1885
AsuC2I CCSGG 5 cut(s) 194, 211, 1122, 2015, 2016
AsuHPI GGTGA 2 cut(s) 496, 524
AvaI CYCGRG 1 cut(s) 2014
AvaII GGWCC 2 cut(s) 46, 1885
AvrII CCTAGG 1 cut(s) 1532
BalI TGGCCA 1 cut(s) 609
BanI GGYRCC 2 cut(s) 51, 1795
BanII GRGCYC 1 cut(s) 363
BbsI GAAGAC 2 cut(s) 128, 2001
Bbv12I GWGCWC 2 cut(s) 363, 1217
BbvI GCAGC 8 cut(s) 27, 90, 118, 340, 967, 1233, 1458, 2093
BccI CCATC 7 cut(s) 315, 503, 615, 1178, 1594, 1786, 2035
BceAI ACGGC 2 cut(s) 236, 282
BciT130I CCWGG 1 cut(s) 657
BciVI GTATCC 1 cut(s) 1993
BcnI CCSGG 5 cut(s) 194, 211, 1122, 2015, 2016
BcoDI GTCTC 2 cut(s) 1659, 1713
BfaI CTAG 5 cut(s) 830, 969, 1200, 1508, 1533
BfmI CTRYAG 4 cut(s) 104, 786, 1423, 1653
BfuAI ACCTGC 1 cut(s) 1903
BfuI GTATCC 1 cut(s) 1993
BlnI CCTAGG 1 cut(s) 1532
BlpI GCTNAGC 1 cut(s) 357
BmcAI AGTACT 2 cut(s) 290, 380
Bme1390I CCNGG 6 cut(s) 194, 211, 657, 1122, 2015, 2016
Bme18I GGWCC 2 cut(s) 46, 1885
BmeT110I CYCGRG 1 cut(s) 2014
BmgBI CACGTC 2 cut(s) 76, 259
BmgT120I GGNCC 5 cut(s) 46, 244, 1124, 1603, 1885
BmiI GGNNCC 7 cut(s) 53, 180, 868, 1125, 1327, 1797, 1887
BmrFI CCNGG 6 cut(s) 194, 211, 657, 1122, 2015, 2016
BmrI ACTGGG 1 cut(s) 1221
BmuI ACTGGG 1 cut(s) 1221
BoxI GACNNNNGTC 1 cut(s) 1725
BpiI GAAGAC 2 cut(s) 128, 2001
Bpu1102I GCTNAGC 1 cut(s) 357
BpuMI CCSGG 5 cut(s) 194, 211, 1122, 2015, 2016
BsaBI GATNNNNATC 1 cut(s) 927
BsaHI GRCGYC 1 cut(s) 164
BsaJI CCNNGG 9 cut(s) 126, 193, 340, 591, 655, 1121, 1532, 1889, 2014
BsaWI WCCGGW 3 cut(s) 48, 222, 667
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 193, 616, 667, 1047, 1534
Bse118I RCCGGY 3 cut(s) 48, 660, 667
Bse1I ACTGG 8 cut(s) 237, 286, 296, 638, 677, 802, 1227, 1706
Bse3DI GCAATG 5 cut(s) 366, 486, 946, 1063, 1173
Bse8I GATNNNNATC 1 cut(s) 927
BseBI CCWGG 1 cut(s) 657
BseDI CCNNGG 9 cut(s) 126, 193, 340, 591, 655, 1121, 1532, 1889, 2014
BseJI GATNNNNATC 1 cut(s) 927
BseLI CCNNNNNNNGG 6 cut(s) 61, 193, 616, 667, 1047, 1534
BseMI GCAATG 5 cut(s) 366, 486, 946, 1063, 1173
BseMII CTCAG 5 cut(s) 97, 297, 348, 572, 1799
BseNI ACTGG 8 cut(s) 237, 286, 296, 638, 677, 802, 1227, 1706
BsePI GCGCGC 1 cut(s) 8
BseRI GAGGAG 6 cut(s) 143, 146, 149, 152, 155, 353
BseXI GCAGC 8 cut(s) 27, 90, 118, 340, 967, 1233, 1458, 2093
BsgI GTGCAG 1 cut(s) 247
Bsh1236I CGCG 2 cut(s) 10, 12
Bsh1285I CGRYCG 1 cut(s) 672
BshNI GGYRCC 2 cut(s) 51, 1795
BshTI ACCGGT 2 cut(s) 48, 667
BsiEI CGRYCG 1 cut(s) 672
BsiHKAI GWGCWC 2 cut(s) 363, 1217
BsiHKCI CYCGRG 1 cut(s) 2014
BsiSI CCGG 9 cut(s) 49, 193, 210, 223, 276, 661, 668, 1121, 2015
BslFI GGGAC 2 cut(s) 1871, 2031
BslI CCNNNNNNNGG 6 cut(s) 61, 193, 616, 667, 1047, 1534
BsmAI GTCTC 2 cut(s) 1659, 1713
BsmFI GGGAC 2 cut(s) 1871, 2031
BsmI GAATGC 2 cut(s) 1139, 1150
BsoBI CYCGRG 1 cut(s) 2014
Bsp1286I GDGCHC 2 cut(s) 363, 1217
Bsp143I GATC 4 cut(s) 282, 595, 1117, 1361
Bsp1720I GCTNAGC 1 cut(s) 357
Bsp19I CCATGG 1 cut(s) 1889
BspACI CCGC 6 cut(s) 5, 182, 273, 302, 548, 1456
BspCNI CTCAG 5 cut(s) 96, 298, 349, 573, 1798
BspFNI CGCG 2 cut(s) 10, 12
BspLI GGNNCC 7 cut(s) 53, 180, 868, 1125, 1327, 1797, 1887
BspMAI CTGCAG 1 cut(s) 108
BspMI ACCTGC 1 cut(s) 1903
BspPI GGATC 4 cut(s) 277, 603, 1112, 1369
BspT107I GGYRCC 2 cut(s) 51, 1795
BsrDI GCAATG 5 cut(s) 366, 486, 946, 1063, 1173
BsrFI RCCGGY 3 cut(s) 48, 660, 667
BsrI ACTGG 8 cut(s) 237, 286, 296, 638, 677, 802, 1227, 1706
BssAI RCCGGY 3 cut(s) 48, 660, 667
BssECI CCNNGG 9 cut(s) 126, 193, 340, 591, 655, 1121, 1532, 1889, 2014
BssHII GCGCGC 1 cut(s) 8
BssMI GATC 4 cut(s) 282, 595, 1117, 1361
BssNI GRCGYC 1 cut(s) 164
BssT1I CCWWGG 4 cut(s) 340, 591, 1532, 1889
Bst2UI CCWGG 1 cut(s) 657
Bst4CI ACNGT 7 cut(s) 188, 390, 535, 1403, 1708, 1879, 2000
Bst6I CTCTTC 2 cut(s) 369, 1048
BstACI GRCGYC 1 cut(s) 164
BstC8I GCNNGC 5 cut(s) 10, 21, 25, 70, 662
BstDEI CTNAG 8 cut(s) 83, 306, 357, 581, 811, 837, 1036, 1785
BstDSI CCRYGG 1 cut(s) 1889
BstENI CCTNNNNNAGG 1 cut(s) 1045
BstFNI CGCG 2 cut(s) 10, 12
BstHHI GCGC 2 cut(s) 10, 12
BstKTI GATC 4 cut(s) 285, 598, 1120, 1364
BstMAI GTCTC 2 cut(s) 1659, 1713
BstMBI GATC 4 cut(s) 282, 595, 1117, 1361
BstMCI CGRYCG 1 cut(s) 672
BstMWI GCNNNNNNNGC 2 cut(s) 16, 1221
BstNI CCWGG 1 cut(s) 657
BstNSI RCATGY 1 cut(s) 31
BstPAI GACNNNNGTC 1 cut(s) 1725
BstSCI CCNGG 6 cut(s) 192, 209, 655, 1120, 2013, 2014
BstSFI CTRYAG 4 cut(s) 104, 786, 1423, 1653
BstUI CGCG 2 cut(s) 10, 12
BstV1I GCAGC 8 cut(s) 27, 90, 118, 340, 967, 1233, 1458, 2093
BstV2I GAAGAC 2 cut(s) 128, 2001
BstX2I RGATCY 1 cut(s) 282
BstYI RGATCY 1 cut(s) 282
BsuI GTATCC 1 cut(s) 1993
BtgI CCRYGG 1 cut(s) 1889
BtgZI GCGATG 1 cut(s) 170
BtrI CACGTC 2 cut(s) 76, 259
BtsIMutI CAGTG 5 cut(s) 531, 684, 795, 1408, 1793
BveI ACCTGC 1 cut(s) 1903
Cac8I GCNNGC 5 cut(s) 10, 21, 25, 70, 662
CaiI CAGNNNCTG 1 cut(s) 797
CfoI GCGC 2 cut(s) 10, 12
Cfr10I RCCGGY 3 cut(s) 48, 660, 667
Cfr13I GGNCC 5 cut(s) 46, 244, 1124, 1603, 1885
Cfr9I CCCGGG 1 cut(s) 2014
CseI GACGC 2 cut(s) 822, 2012
Csp6I GTAC 6 cut(s) 31, 220, 289, 379, 825, 1525
CspAI ACCGGT 2 cut(s) 48, 667
CspCI CAANNNNNGTGG 2 cut(s) 859, 894
CviAII CATG 9 cut(s) 28, 98, 241, 403, 429, 599, 1418, 1890, 1936
CviQI GTAC 6 cut(s) 31, 220, 289, 379, 825, 1525
DdeI CTNAG 8 cut(s) 83, 306, 357, 581, 811, 837, 1036, 1785
DpnI GATC 4 cut(s) 284, 597, 1119, 1363
DpnII GATC 4 cut(s) 282, 595, 1117, 1361
DraI TTTAAA 1 cut(s) 1390
EaeI YGGCCR 3 cut(s) 607, 658, 662
Eam1104I CTCTTC 2 cut(s) 369, 1048
EarI CTCTTC 2 cut(s) 369, 1048
EciI GGCGGA 1 cut(s) 262
Ecl136II GAGCTC 1 cut(s) 361
Eco130I CCWWGG 4 cut(s) 340, 591, 1532, 1889
Eco147I AGGCCT 1 cut(s) 1965
Eco24I GRGCYC 1 cut(s) 363
Eco47I GGWCC 2 cut(s) 46, 1885
Eco53kI GAGCTC 1 cut(s) 361
Eco57I CTGAAG 5 cut(s) 393, 1134, 1149, 1821, 2070
Eco88I CYCGRG 1 cut(s) 2014
EcoICRI GAGCTC 1 cut(s) 361
EcoNI CCTNNNNNAGG 1 cut(s) 1045
EcoO109I RGGNCCY 1 cut(s) 1124
EcoRII CCWGG 1 cut(s) 655
EcoT14I CCWWGG 4 cut(s) 340, 591, 1532, 1889
EcoT38I GRGCYC 1 cut(s) 363
ErhI CCWWGG 4 cut(s) 340, 591, 1532, 1889
FaeI CATG 9 cut(s) 31, 101, 244, 406, 432, 602, 1421, 1893, 1939
FalI AAGNNNNNCTT 2 cut(s) 1370, 1402
FaqI GGGAC 2 cut(s) 1871, 2031
FatI CATG 9 cut(s) 27, 97, 240, 402, 428, 598, 1417, 1889, 1935
FriOI GRGCYC 1 cut(s) 363
FseI GGCCGGCC 1 cut(s) 664
FspBI CTAG 5 cut(s) 830, 969, 1200, 1508, 1533
GlaI GCGC 2 cut(s) 9, 11
HapII CCGG 9 cut(s) 49, 193, 210, 223, 276, 661, 668, 1121, 2015
HgaI GACGC 2 cut(s) 822, 2012
HhaI GCGC 2 cut(s) 10, 12
Hin1I GRCGYC 1 cut(s) 164
Hin1II CATG 9 cut(s) 31, 101, 244, 406, 432, 602, 1421, 1893, 1939
Hin6I GCGC 2 cut(s) 8, 10
HinP1I GCGC 2 cut(s) 8, 10
HincII GTYRAC 2 cut(s) 766, 1190
HindII GTYRAC 2 cut(s) 766, 1190
HpaI GTTAAC 1 cut(s) 766
HpaII CCGG 9 cut(s) 49, 193, 210, 223, 276, 661, 668, 1121, 2015
HphI GGTGA 2 cut(s) 496, 524
Hpy166II GTNNAC 6 cut(s) 256, 766, 827, 1190, 1384, 1660
Hpy188III TCNNGA 5 cut(s) 462, 729, 1354, 1756, 1973
Hpy8I GTNNAC 6 cut(s) 256, 766, 827, 1190, 1384, 1660
Hpy99I CGWCG 1 cut(s) 1593
HpyAV CCTTC 5 cut(s) 319, 1762, 1830, 1955, 2050
HpyCH4III ACNGT 7 cut(s) 188, 390, 535, 1403, 1708, 1879, 2000
HpyCH4IV ACGT 6 cut(s) 75, 164, 258, 1504, 1591, 2061
HpyF10VI GCNNNNNNNGC 2 cut(s) 16, 1221
HpyF3I CTNAG 8 cut(s) 83, 306, 357, 581, 811, 837, 1036, 1785
HpySE526I ACGT 6 cut(s) 75, 164, 258, 1504, 1591, 2061
Hsp92I GRCGYC 1 cut(s) 164
Hsp92II CATG 9 cut(s) 31, 101, 244, 406, 432, 602, 1421, 1893, 1939
HspAI GCGC 2 cut(s) 8, 10
KroI GCCGGC 1 cut(s) 660
KroNI GCCGGC 1 cut(s) 662
KspAI GTTAAC 1 cut(s) 766
Kzo9I GATC 4 cut(s) 282, 595, 1117, 1361
LmnI GCTCC 4 cut(s) 225, 366, 866, 1484
Lsp1109I GCAGC 8 cut(s) 27, 90, 118, 340, 967, 1233, 1458, 2093
MaeI CTAG 5 cut(s) 830, 969, 1200, 1508, 1533
MaeII ACGT 6 cut(s) 75, 164, 258, 1504, 1591, 2061
MaeIII GTNAC 4 cut(s) 484, 946, 1516, 2009
MalI GATC 4 cut(s) 284, 597, 1119, 1363
MboI GATC 4 cut(s) 282, 595, 1117, 1361
MflI RGATCY 1 cut(s) 282
MhlI GDGCHC 2 cut(s) 363, 1217
MlsI TGGCCA 1 cut(s) 609
MluCI AATT 8 cut(s) 647, 961, 973, 1100, 1255, 1314, 1627, 2113
MluNI TGGCCA 1 cut(s) 609
MlyI GAGTC 3 cut(s) 8, 75, 223
MmeI TCCRAC 2 cut(s) 1696, 1900
Mox20I TGGCCA 1 cut(s) 609
MroNI GCCGGC 1 cut(s) 660
MscI TGGCCA 1 cut(s) 609
MslI CAYNNNNRTG 3 cut(s) 603, 1464, 1786
Msp20I TGGCCA 1 cut(s) 609
MspI CCGG 9 cut(s) 49, 193, 210, 223, 276, 661, 668, 1121, 2015
MspR9I CCNGG 6 cut(s) 194, 211, 657, 1122, 2015, 2016
Mva1269I GAATGC 2 cut(s) 1139, 1150
MvaI CCWGG 1 cut(s) 657
MvnI CGCG 2 cut(s) 10, 12
MwoI GCNNNNNNNGC 2 cut(s) 16, 1221
NaeI GCCGGC 1 cut(s) 662
NciI CCSGG 5 cut(s) 194, 211, 1122, 2015, 2016
NcoI CCATGG 1 cut(s) 1889
NdeII GATC 4 cut(s) 282, 595, 1117, 1361
NgoMIV GCCGGC 1 cut(s) 660
NlaIII CATG 9 cut(s) 31, 101, 244, 406, 432, 602, 1421, 1893, 1939
NlaIV GGNNCC 7 cut(s) 53, 180, 868, 1125, 1327, 1797, 1887
NmeAIII GCCGAG 1 cut(s) 115
NmuCI GTSAC 4 cut(s) 484, 946, 1516, 2009
NspI RCATGY 1 cut(s) 31
OliI CACNNNNGTG 1 cut(s) 1786
PauI GCGCGC 1 cut(s) 8
PceI AGGCCT 1 cut(s) 1965
PcsI WCGNNNNNNNCGW 2 cut(s) 123, 255
PctI GAATGC 2 cut(s) 1139, 1150
PdiI GCCGGC 1 cut(s) 662
PfeI GAWTC 7 cut(s) 295, 310, 399, 1006, 1282, 1350, 2044
PflFI GACNNNGTC 1 cut(s) 2022
PflMI CCANNNNNTGG 1 cut(s) 61
PfoI TCCNGGA 1 cut(s) 209
PinAI ACCGGT 2 cut(s) 48, 667
PleI GAGTC 3 cut(s) 8, 75, 222
PpsI GAGTC 3 cut(s) 8, 75, 222
PshAI GACNNNNGTC 1 cut(s) 1725
Psp124BI GAGCTC 1 cut(s) 363
Psp6I CCWGG 1 cut(s) 655
PspGI CCWGG 1 cut(s) 655
PspN4I GGNNCC 7 cut(s) 53, 180, 868, 1125, 1327, 1797, 1887
PspPI GGNCC 5 cut(s) 46, 244, 1124, 1603, 1885
PstI CTGCAG 1 cut(s) 108
PstNI CAGNNNCTG 1 cut(s) 797
PsuI RGATCY 1 cut(s) 282
PsyI GACNNNGTC 1 cut(s) 2022
PteI GCGCGC 1 cut(s) 8
RigI GGCCGGCC 1 cut(s) 664
RsaI GTAC 6 cut(s) 32, 221, 290, 380, 826, 1526
RsaNI GTAC 6 cut(s) 31, 220, 289, 379, 825, 1525
RseI CAYNNNNRTG 3 cut(s) 603, 1464, 1786
SacI GAGCTC 1 cut(s) 363
Sau3AI GATC 4 cut(s) 282, 595, 1117, 1361
Sau96I GGNCC 5 cut(s) 46, 244, 1124, 1603, 1885
ScaI AGTACT 2 cut(s) 290, 380
SchI GAGTC 3 cut(s) 8, 75, 223
ScrFI CCNGG 6 cut(s) 194, 211, 657, 1122, 2015, 2016
SduI GDGCHC 2 cut(s) 363, 1217
SfcI CTRYAG 4 cut(s) 104, 786, 1423, 1653
SinI GGWCC 2 cut(s) 46, 1885
SmaI CCCGGG 1 cut(s) 2016
SmiMI CAYNNNNRTG 3 cut(s) 603, 1464, 1786
Sse9I AATT 8 cut(s) 647, 961, 973, 1100, 1255, 1314, 1627, 2113
SseBI AGGCCT 1 cut(s) 1965
SsiI CCGC 6 cut(s) 5, 182, 273, 302, 548, 1456
SspI AATATT 1 cut(s) 418
SspMI CTAG 5 cut(s) 830, 969, 1200, 1508, 1533
SstI GAGCTC 1 cut(s) 363
StuI AGGCCT 1 cut(s) 1965
StyD4I CCNGG 6 cut(s) 192, 209, 655, 1120, 2013, 2014
StyI CCWWGG 4 cut(s) 340, 591, 1532, 1889
TaaI ACNGT 7 cut(s) 188, 390, 535, 1403, 1708, 1879, 2000
TaiI ACGT 6 cut(s) 78, 167, 261, 1507, 1594, 2064
TaqI TCGA 1 cut(s) 1733
TaqII GACCGA 2 cut(s) 140, 1873
TasI AATT 8 cut(s) 647, 961, 973, 1100, 1255, 1314, 1627, 2113
TatI WGTACW 2 cut(s) 288, 378
TauI GCSGC 4 cut(s) 8, 305, 551, 1459
TfiI GAWTC 7 cut(s) 295, 310, 399, 1006, 1282, 1350, 2044
TscAI CASTG 5 cut(s) 538, 684, 802, 1408, 1793
TseFI GTSAC 4 cut(s) 484, 946, 1516, 2009
TseI GCWGC 8 cut(s) 40, 103, 106, 353, 955, 1221, 1471, 2081
Tsp45I GTSAC 4 cut(s) 484, 946, 1516, 2009
TspGWI ACGGA 1 cut(s) 207
TspMI CCCGGG 1 cut(s) 2014
TspRI CASTG 5 cut(s) 538, 684, 802, 1408, 1793
Tth111I GACNNNGTC 1 cut(s) 2022
Van91I CCANNNNNTGG 1 cut(s) 61
VpaK11BI GGWCC 2 cut(s) 46, 1885
XagI CCTNNNNNAGG 1 cut(s) 1045
XapI RAATTY 1 cut(s) 973
XceI RCATGY 1 cut(s) 31
XcmI CCANNNNNNNNNTGG 1 cut(s) 653
XmaI CCCGGG 1 cut(s) 2014
XmaJI CCTAGG 1 cut(s) 1532
XspI CTAG 5 cut(s) 830, 969, 1200, 1508, 1533
ZraI GACGTC 1 cut(s) 165
ZrmI AGTACT 2 cut(s) 290, 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.