Rh1AG225200

Myelodysplasia-myeloid leukemia factor 1-interacting protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
42825407 .. 42841014
15608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG225200.1

Sequence Viewer

Length: 1110 bp
ATGGCAGCTCCGGCGACCCATTTATCCATGACGCACCTCCTCCACGAGTGCATAGCCTACCAACACGCCCTGGATCTCAACCTCGACCACCTCCTCTCCCAGCGCTCCGACCTCGACAAGCACATCTCCAATCTCCAGAAATCCTCCCAGGTCCTCGACATTGTCAAGTCCGACGCCGACCACGTCCTCTCCAACGTCTCCTCCACCTGCGACCTCGTCGACCACGTCAGCGCCAAGCTCCGCGAGCTCGACCTCGCCCAGTCGCGAGTCAACTCCGGGAAGCTCAAAGCTCCACGCCGGAATCGACAAAAGGAAACAAAGCAGTTGGGCGCTTCTGGAGTTCTCTTTCATTCTCTCAAACCTTCGTTTCCATTCGTTCGTTCCATCAGAGGGATAATCGCAACCAATATGCAAAGCGAAAGGCAAGGCAGACGCGGTTTCTCTCGCTCAGATGACCTGTTAAATAGTTTCCCGGGATTTGGATCTCGTAGAAGCATGTTGCCTAGCCTCTTCAGTGGAAGGGATCCATTTGATGATCCCTTCTTCAGTCGGCCGCTTGGAGACATGTTTGAGTCTAGCATGTTCCGTCCAAGTGCTGCTTCTAGTGATACACCAAAGAGTGGTAGAGATGGGGGAATCATAGTAGAAGAACTAGACTCTGATGATGATGGAGAGGAAGATGAGGTTACTGGAGATGGGAGAGATAAGAGGAAGCAACGAACTGTGTCAAGCGAAGAGCCATCTGTTGAGCATCCGGATGATGATGATATGGATGAAGAGACAGGCAAGAACACGAGTAAAAGAGGTGATTTCAACAAGGTGCAAAGCACACAGCCCCAGGGTCGTAGTGCCTCTGTTCAGAGTTGCAGAGTCACATGTGGTGGTGTAGATGGAGCATATTACACTTCTACAAGAACCAGAAGGGCAGGCAATGATGGCGTGAAGATTGAGGAGACCAAAGAAGCAGATAGGACAACTGGTCGAGCAACACATAAGATATCTAGAGGAATTCATGATAAGGTACACCTTTTCTGCTCATTCAGCCTGGACAACAGATATAACCACGAACTGCATTTTTGGGTGCAAAAAATTTCGGTTAATAAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

369

Amino Acids

41.14

Weight (kDa)

6.57

Isoelectric Point (pI)

52.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COG4_N PF20663 42 - 92 6.2e-09 Conserved oligomeric Golgi complex subunit 4, N-terminal
Mlf1IP PF10248 229 - 343 1.6e-07 Myelodysplasia-myeloid leukemia factor 1-interacting protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 215
Acc36I ACCTGC 1 cut(s) 215
AccB7I CCANNNNNTGG 1 cut(s) 620
AccI GTMKAC 1 cut(s) 219
AccII CGCG 3 cut(s) 243, 265, 435
AccIII TCCGGA 1 cut(s) 754
AciI CCGC 3 cut(s) 241, 435, 554
AclWI GGATC 5 cut(s) 81, 490, 518, 530, 531
AcoI YGGCCR 1 cut(s) 551
AcsI RAATTY 2 cut(s) 1008, 1089
AcuI CTGAAG 2 cut(s) 496, 529
AcyI GRCGYC 1 cut(s) 174
AfaI GTAC 1 cut(s) 1023
AfeI AGCGCT 1 cut(s) 104
AfiI CCNNNNNNNGG 3 cut(s) 390, 479, 620
AflIII ACRYGT 2 cut(s) 564, 875
AgsI TTSAA 1 cut(s) 814
AhdI GACNNNNNGTC 1 cut(s) 978
AjiI CACGTC 2 cut(s) 184, 226
AjnI CCWGG 4 cut(s) 69, 147, 837, 1044
AjuI GAANNNNNNNTTGG 2 cut(s) 583, 615
AluBI AGCT 5 cut(s) 8, 238, 247, 283, 290
AluI AGCT 5 cut(s) 8, 238, 247, 283, 290
Alw21I GWGCWC 1 cut(s) 249
Alw26I GTCTC 4 cut(s) 202, 555, 773, 947
AlwI GGATC 5 cut(s) 81, 490, 518, 530, 531
Ama87I CYCGRG 1 cut(s) 472
Aor13HI TCCGGA 1 cut(s) 754
Aor51HI AGCGCT 1 cut(s) 104
AoxI GGCC 1 cut(s) 551
ApeKI GCWGC 2 cut(s) 5, 596
ApoI RAATTY 2 cut(s) 1008, 1089
AspLEI GCGC 3 cut(s) 105, 233, 332
AspS9I GGNCC 1 cut(s) 151
AsuC2I CCSGG 3 cut(s) 277, 473, 474
AsuHPI GGTGA 1 cut(s) 818
AvaI CYCGRG 1 cut(s) 472
AvaII GGWCC 1 cut(s) 151
BamHI GGATCC 1 cut(s) 523
BanII GRGCYC 1 cut(s) 249
BauI CACGAG 2 cut(s) 44, 793
Bbv12I GWGCWC 1 cut(s) 249
BbvI GCAGC 2 cut(s) 17, 583
BccI CCATC 7 cut(s) 392, 623, 662, 689, 748, 884, 929
BciT130I CCWGG 4 cut(s) 71, 149, 839, 1046
BcnI CCSGG 3 cut(s) 277, 473, 474
BcoDI GTCTC 4 cut(s) 202, 555, 773, 947
BfaI CTAG 5 cut(s) 504, 576, 603, 653, 1002
BfoI RGCGCY 3 cut(s) 106, 234, 333
BfuAI ACCTGC 1 cut(s) 215
BisI GCNGC 3 cut(s) 6, 554, 597
BlsI GCNGC 3 cut(s) 7, 555, 598
Bme1390I CCNGG 7 cut(s) 71, 149, 277, 473, 474, 839, 1046
Bme18I GGWCC 1 cut(s) 151
BmeRI GACNNNNNGTC 1 cut(s) 978
BmeT110I CYCGRG 1 cut(s) 472
BmgBI CACGTC 2 cut(s) 184, 226
BmgT120I GGNCC 1 cut(s) 151
BmiI GGNNCC 1 cut(s) 525
BmrFI CCNGG 7 cut(s) 71, 149, 277, 473, 474, 839, 1046
BmrI ACTGGG 1 cut(s) 253
BmsI GCATC 1 cut(s) 760
BmuI ACTGGG 1 cut(s) 253
BpmI CTGGAG 3 cut(s) 119, 357, 711
BpuMI CCSGG 3 cut(s) 277, 473, 474
BsaBI GATNNNNATC 1 cut(s) 481
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 947
BsaJI CCNNGG 5 cut(s) 69, 147, 472, 837, 838
BsaWI WCCGGW 1 cut(s) 754
BsaXI ACNNNNNCTCC 6 cut(s) 80, 110, 173, 185, 203, 215
Bsc4I CCNNNNNNNGG 3 cut(s) 390, 479, 620
Bse1I ACTGG 3 cut(s) 259, 694, 982
Bse3DI GCAATG 1 cut(s) 937
Bse8I GATNNNNATC 1 cut(s) 481
BseAI TCCGGA 1 cut(s) 754
BseBI CCWGG 4 cut(s) 71, 149, 839, 1046
BseDI CCNNGG 5 cut(s) 69, 147, 472, 837, 838
BseGI GGATG 3 cut(s) 751, 763, 778
BseJI GATNNNNATC 1 cut(s) 481
BseLI CCNNNNNNNGG 3 cut(s) 390, 479, 620
BseMI GCAATG 1 cut(s) 937
BseMII CTCAG 1 cut(s) 462
BseNI ACTGG 3 cut(s) 259, 694, 982
BseRI GAGGAG 4 cut(s) 29, 83, 190, 965
BseX3I CGGCCG 1 cut(s) 551
BseXI GCAGC 2 cut(s) 17, 583
BseYI CCCAGC 1 cut(s) 99
Bsh1236I CGCG 3 cut(s) 243, 265, 435
Bsh1285I CGRYCG 1 cut(s) 554
BshFI GGCC 1 cut(s) 553
BsiEI CGRYCG 1 cut(s) 554
BsiHKAI GWGCWC 1 cut(s) 249
BsiHKCI CYCGRG 1 cut(s) 472
BsiSI CCGG 5 cut(s) 11, 276, 298, 473, 755
BslI CCNNNNNNNGG 3 cut(s) 390, 479, 620
BsmAI GTCTC 4 cut(s) 202, 555, 773, 947
BsmBI CGTCTC 1 cut(s) 202
BsnI GGCC 1 cut(s) 553
Bso31I GGTCTC 1 cut(s) 947
BsoBI CYCGRG 1 cut(s) 472
Bsp1286I GDGCHC 1 cut(s) 249
Bsp13I TCCGGA 1 cut(s) 754
Bsp143I GATC 4 cut(s) 73, 482, 523, 535
Bsp68I TCGCGA 1 cut(s) 265
BspACI CCGC 3 cut(s) 241, 435, 554
BspANI GGCC 1 cut(s) 553
BspCNI CTCAG 1 cut(s) 461
BspEI TCCGGA 1 cut(s) 754
BspFNI CGCG 3 cut(s) 243, 265, 435
BspHI TCATGA 1 cut(s) 1012
BspLI GGNNCC 1 cut(s) 525
BspMI ACCTGC 1 cut(s) 215
BspPI GGATC 5 cut(s) 81, 490, 518, 530, 531
BspQI GCTCTTC 1 cut(s) 729
BspTNI GGTCTC 1 cut(s) 947
BsrDI GCAATG 1 cut(s) 937
BsrI ACTGG 3 cut(s) 259, 694, 982
BssECI CCNNGG 5 cut(s) 69, 147, 472, 837, 838
BssMI GATC 4 cut(s) 73, 482, 523, 535
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 2 cut(s) 44, 793
Bst2BI CACGAG 2 cut(s) 44, 793
Bst2UI CCWGG 4 cut(s) 71, 149, 839, 1046
Bst4CI ACNGT 1 cut(s) 724
Bst6I CTCTTC 3 cut(s) 515, 729, 771
BstACI GRCGYC 1 cut(s) 174
BstC8I GCNNGC 2 cut(s) 245, 928
BstDEI CTNAG 1 cut(s) 448
BstF5I GGATG 3 cut(s) 751, 763, 778
BstFNI CGCG 3 cut(s) 243, 265, 435
BstH2I RGCGCY 3 cut(s) 106, 234, 333
BstHHI GCGC 3 cut(s) 105, 233, 332
BstKTI GATC 4 cut(s) 76, 485, 526, 538
BstMAI GTCTC 4 cut(s) 202, 555, 773, 947
BstMBI GATC 4 cut(s) 73, 482, 523, 535
BstMCI CGRYCG 1 cut(s) 554
BstMWI GCNNNNNNNGC 4 cut(s) 11, 244, 936, 1041
BstNI CCWGG 4 cut(s) 71, 149, 839, 1046
BstNSI RCATGY 4 cut(s) 499, 568, 583, 879
BstSCI CCNGG 7 cut(s) 69, 147, 275, 471, 472, 837, 1044
BstUI CGCG 3 cut(s) 243, 265, 435
BstV1I GCAGC 2 cut(s) 17, 583
BstX2I RGATCY 3 cut(s) 73, 482, 523
BstYI RGATCY 3 cut(s) 73, 482, 523
BstZI CGGCCG 1 cut(s) 551
BsuRI GGCC 1 cut(s) 553
BtrI CACGTC 2 cut(s) 184, 226
BtsCI GGATG 3 cut(s) 751, 763, 778
BtsIMutI CAGTG 1 cut(s) 520
BtuMI TCGCGA 1 cut(s) 265
BveI ACCTGC 1 cut(s) 215
Cac8I GCNNGC 2 cut(s) 245, 928
CciI TCATGA 1 cut(s) 1012
CfoI GCGC 3 cut(s) 105, 233, 332
Cfr13I GGNCC 1 cut(s) 151
Cfr9I CCCGGG 1 cut(s) 472
CseI GACGC 3 cut(s) 40, 182, 441
Csp6I GTAC 1 cut(s) 1022
CviAII CATG 6 cut(s) 28, 496, 565, 580, 876, 1013
CviQI GTAC 1 cut(s) 1022
DdeI CTNAG 1 cut(s) 448
DpnI GATC 4 cut(s) 75, 484, 525, 537
DpnII GATC 4 cut(s) 73, 482, 523, 535
DriI GACNNNNNGTC 1 cut(s) 978
EaeI YGGCCR 1 cut(s) 551
EagI CGGCCG 1 cut(s) 551
Eam1104I CTCTTC 3 cut(s) 515, 729, 771
Eam1105I GACNNNNNGTC 1 cut(s) 978
EarI CTCTTC 3 cut(s) 515, 729, 771
Ecl136II GAGCTC 1 cut(s) 247
EclXI CGGCCG 1 cut(s) 551
Eco24I GRGCYC 1 cut(s) 249
Eco31I GGTCTC 1 cut(s) 947
Eco32I GATATC 1 cut(s) 999
Eco47I GGWCC 1 cut(s) 151
Eco47III AGCGCT 1 cut(s) 104
Eco52I CGGCCG 1 cut(s) 551
Eco53kI GAGCTC 1 cut(s) 247
Eco57I CTGAAG 2 cut(s) 496, 529
Eco88I CYCGRG 1 cut(s) 472
EcoICRI GAGCTC 1 cut(s) 247
EcoO109I RGGNCCY 1 cut(s) 151
EcoRI GAATTC 1 cut(s) 1008
EcoRII CCWGG 4 cut(s) 69, 147, 837, 1044
EcoRV GATATC 1 cut(s) 999
EcoT38I GRGCYC 1 cut(s) 249
Esp3I CGTCTC 1 cut(s) 202
FaeI CATG 6 cut(s) 31, 499, 568, 583, 879, 1016
FalI AAGNNNNNCTT 2 cut(s) 583, 615
FatI CATG 6 cut(s) 27, 495, 564, 579, 875, 1012
FblI GTMKAC 1 cut(s) 219
Fnu4HI GCNGC 3 cut(s) 6, 554, 597
FokI GGATG 3 cut(s) 738, 770, 785
FriOI GRGCYC 1 cut(s) 249
Fsp4HI GCNGC 3 cut(s) 6, 554, 597
FspBI CTAG 5 cut(s) 504, 576, 603, 653, 1002
GlaI GCGC 3 cut(s) 104, 232, 331
GluI GCNGC 3 cut(s) 6, 554, 597
GsaI CCCAGC 1 cut(s) 103
GsuI CTGGAG 3 cut(s) 119, 357, 711
HaeII RGCGCY 3 cut(s) 106, 234, 333
HaeIII GGCC 1 cut(s) 553
HapII CCGG 5 cut(s) 11, 276, 298, 473, 755
HgaI GACGC 3 cut(s) 40, 182, 441
HhaI GCGC 3 cut(s) 105, 233, 332
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 6 cut(s) 31, 499, 568, 583, 879, 1016
Hin6I GCGC 3 cut(s) 103, 231, 330
HinP1I GCGC 3 cut(s) 103, 231, 330
HincII GTYRAC 2 cut(s) 220, 271
HindII GTYRAC 2 cut(s) 220, 271
HinfI GANTC 6 cut(s) 267, 301, 572, 636, 656, 870
HpaII CCGG 5 cut(s) 11, 276, 298, 473, 755
HphI GGTGA 1 cut(s) 818
Hpy166II GTNNAC 3 cut(s) 220, 271, 1024
Hpy188I TCNGA 6 cut(s) 109, 172, 389, 451, 661, 861
Hpy188III TCNNGA 6 cut(s) 136, 264, 336, 755, 1002, 1013
Hpy8I GTNNAC 3 cut(s) 220, 271, 1024
Hpy99I CGWCG 2 cut(s) 176, 221
HpyAV CCTTC 4 cut(s) 372, 513, 550, 915
HpyCH4III ACNGT 1 cut(s) 724
HpyCH4IV ACGT 3 cut(s) 183, 195, 225
HpyCH4V TGCA 6 cut(s) 51, 412, 823, 867, 1072, 1084
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 244, 936, 1041
HpyF3I CTNAG 1 cut(s) 448
HpySE526I ACGT 3 cut(s) 183, 195, 225
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 6 cut(s) 31, 499, 568, 583, 879, 1016
HspAI GCGC 3 cut(s) 103, 231, 330
Kpn2I TCCGGA 1 cut(s) 754
Kzo9I GATC 4 cut(s) 73, 482, 523, 535
LguI GCTCTTC 1 cut(s) 729
LmnI GCTCC 5 cut(s) 13, 110, 243, 295, 893
Lsp1109I GCAGC 2 cut(s) 17, 583
LweI GCATC 1 cut(s) 760
MaeI CTAG 5 cut(s) 504, 576, 603, 653, 1002
MaeII ACGT 3 cut(s) 183, 195, 225
MaeIII GTNAC 2 cut(s) 685, 871
MalI GATC 4 cut(s) 75, 484, 525, 537
MboI GATC 4 cut(s) 73, 482, 523, 535
MboII GAAGA 7 cut(s) 502, 535, 659, 689, 746, 788, 955
MflI RGATCY 3 cut(s) 73, 482, 523
MhlI GDGCHC 1 cut(s) 249
MluCI AATT 2 cut(s) 1008, 1089
MlyI GAGTC 4 cut(s) 276, 581, 650, 879
MmeI TCCRAC 3 cut(s) 132, 195, 216
MroI TCCGGA 1 cut(s) 754
MseI TTAA 2 cut(s) 461, 1098
MslI CAYNNNNRTG 1 cut(s) 756
MspI CCGG 5 cut(s) 11, 276, 298, 473, 755
MspR9I CCNGG 7 cut(s) 71, 149, 277, 473, 474, 839, 1046
MvaI CCWGG 4 cut(s) 71, 149, 839, 1046
MvnI CGCG 3 cut(s) 243, 265, 435
MwoI GCNNNNNNNGC 4 cut(s) 11, 244, 936, 1041
NciI CCSGG 3 cut(s) 277, 473, 474
NdeII GATC 4 cut(s) 73, 482, 523, 535
NlaIII CATG 6 cut(s) 31, 499, 568, 583, 879, 1016
NlaIV GGNNCC 1 cut(s) 525
NmuCI GTSAC 1 cut(s) 871
NruI TCGCGA 1 cut(s) 265
NspI RCATGY 4 cut(s) 499, 568, 583, 879
PagI TCATGA 1 cut(s) 1012
PaqCI CACCTGC 1 cut(s) 215
PasI CCCWGGG 1 cut(s) 838
PciI ACATGT 2 cut(s) 564, 875
PciSI GCTCTTC 1 cut(s) 729
PcsI WCGNNNNNNNCGW 3 cut(s) 180, 222, 301
PfeI GAWTC 2 cut(s) 301, 636
PflFI GACNNNGTC 4 cut(s) 161, 182, 215, 224
PflMI CCANNNNNTGG 1 cut(s) 620
PfoI TCCNGGA 1 cut(s) 275
PkrI GCNGC 3 cut(s) 7, 555, 598
PleI GAGTC 4 cut(s) 275, 580, 650, 878
PpsI GAGTC 4 cut(s) 275, 580, 650, 878
PpuMI RGGWCCY 1 cut(s) 151
PscI ACATGT 2 cut(s) 564, 875
Psp124BI GAGCTC 1 cut(s) 249
Psp5II RGGWCCY 1 cut(s) 151
Psp6I CCWGG 4 cut(s) 69, 147, 837, 1044
PspFI CCCAGC 1 cut(s) 99
PspGI CCWGG 4 cut(s) 69, 147, 837, 1044
PspN4I GGNNCC 1 cut(s) 525
PspPI GGNCC 1 cut(s) 151
PspPPI RGGWCCY 1 cut(s) 151
PsuI RGATCY 3 cut(s) 73, 482, 523
PsyI GACNNNGTC 4 cut(s) 161, 182, 215, 224
RruI TCGCGA 1 cut(s) 265
RsaI GTAC 1 cut(s) 1023
RsaNI GTAC 1 cut(s) 1022
RseI CAYNNNNRTG 1 cut(s) 756
SacI GAGCTC 1 cut(s) 249
SalI GTCGAC 1 cut(s) 218
SapI GCTCTTC 1 cut(s) 729
SaqAI TTAA 2 cut(s) 461, 1098
SatI GCNGC 3 cut(s) 6, 554, 597
Sau3AI GATC 4 cut(s) 73, 482, 523, 535
Sau96I GGNCC 1 cut(s) 151
SchI GAGTC 4 cut(s) 276, 581, 650, 879
ScrFI CCNGG 7 cut(s) 71, 149, 277, 473, 474, 839, 1046
SduI GDGCHC 1 cut(s) 249
SfaNI GCATC 1 cut(s) 760
SinI GGWCC 1 cut(s) 151
SmaI CCCGGG 1 cut(s) 474
SmiMI CAYNNNNRTG 1 cut(s) 756
Sse9I AATT 2 cut(s) 1008, 1089
SsiI CCGC 3 cut(s) 241, 435, 554
SspMI CTAG 5 cut(s) 504, 576, 603, 653, 1002
SstI GAGCTC 1 cut(s) 249
StyD4I CCNGG 7 cut(s) 69, 147, 275, 471, 472, 837, 1044
TaaI ACNGT 1 cut(s) 724
TaiI ACGT 3 cut(s) 186, 198, 228
TaqI TCGA 7 cut(s) 84, 114, 156, 219, 249, 304, 982
TasI AATT 2 cut(s) 1008, 1089
TauI GCSGC 1 cut(s) 556
TfiI GAWTC 2 cut(s) 301, 636
Tru1I TTAA 2 cut(s) 461, 1098
Tru9I TTAA 2 cut(s) 461, 1098
TscAI CASTG 1 cut(s) 520
TseFI GTSAC 1 cut(s) 871
TseI GCWGC 2 cut(s) 5, 596
Tsp45I GTSAC 1 cut(s) 871
TspDTI ATGAA 3 cut(s) 338, 789, 1001
TspGWI ACGGA 1 cut(s) 575
TspMI CCCGGG 1 cut(s) 472
TspRI CASTG 1 cut(s) 520
Tth111I GACNNNGTC 4 cut(s) 161, 182, 215, 224
Van91I CCANNNNNTGG 1 cut(s) 620
VpaK11BI GGWCC 1 cut(s) 151
XapI RAATTY 2 cut(s) 1008, 1089
XbaI TCTAGA 1 cut(s) 1001
XceI RCATGY 4 cut(s) 499, 568, 583, 879
XmaI CCCGGG 1 cut(s) 472
XmiI GTMKAC 1 cut(s) 219
XspI CTAG 5 cut(s) 504, 576, 603, 653, 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.