(NAC) domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g12150 |
| rosa_chinensis | RchiOBHm_Chr1g0350911 |
| rosa_laevigata | RLG00000028443 RLG00000028444 |
| rosa_multiflora | Rmu_sc0014584.1_g000008 Rmu_sc0014584.1_g000010 |
| rosa_roxburghii | Rroxscaffold_4G00304380 Rroxscaffold_4G00304420 |
| rosa_rugosa | Rorug01G0215100 Rorug06G0023100 Rorug06G0023200 |
| rosa_samantha | Rh1AG229500 Rh1AG229700 Rh1AG229800 Rh1BG075100 Rh1BG199500 Rh1BG199700 Rh1DG227500 |
| rosa_wichuraiana | Rw1G019890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 934 |
| AccI | GTMKAC | 1 cut(s) | 377 |
| AccIII | TCCGGA | 1 cut(s) | 420 |
| AciI | CCGC | 3 cut(s) | 237, 511, 934 |
| AclWI | GGATC | 3 cut(s) | 227, 1455, 1468 |
| AcoI | YGGCCR | 1 cut(s) | 97 |
| AcsI | RAATTY | 4 cut(s) | 67, 615, 969, 1292 |
| AdeI | CACNNNGTG | 1 cut(s) | 452 |
| AfaI | GTAC | 5 cut(s) | 539, 662, 739, 884, 938 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 209, 517, 702, 754 |
| AflIII | ACRYGT | 1 cut(s) | 352 |
| AgsI | TTSAA | 4 cut(s) | 216, 1124, 1168, 1532 |
| AhlI | ACTAGT | 2 cut(s) | 380, 1054 |
| AjnI | CCWGG | 2 cut(s) | 99, 110 |
| AluBI | AGCT | 2 cut(s) | 322, 950 |
| AluI | AGCT | 2 cut(s) | 322, 950 |
| Alw26I | GTCTC | 1 cut(s) | 1042 |
| AlwI | GGATC | 3 cut(s) | 227, 1455, 1468 |
| Aor13HI | TCCGGA | 1 cut(s) | 420 |
| AoxI | GGCC | 2 cut(s) | 97, 789 |
| ApeKI | GCWGC | 2 cut(s) | 758, 1424 |
| ApoI | RAATTY | 4 cut(s) | 67, 615, 969, 1292 |
| AsuHPI | GGTGA | 2 cut(s) | 322, 1157 |
| AsuII | TTCGAA | 1 cut(s) | 922 |
| BalI | TGGCCA | 1 cut(s) | 99 |
| BamHI | GGATCC | 1 cut(s) | 1460 |
| BanII | GRGCYC | 3 cut(s) | 111, 203, 695 |
| BbsI | GAAGAC | 1 cut(s) | 474 |
| BbvI | GCAGC | 2 cut(s) | 745, 1436 |
| BccI | CCATC | 1 cut(s) | 1636 |
| BciT130I | CCWGG | 2 cut(s) | 101, 112 |
| BciVI | GTATCC | 1 cut(s) | 1594 |
| BclI | TGATCA | 1 cut(s) | 1249 |
| BcoDI | GTCTC | 1 cut(s) | 1042 |
| BcuI | ACTAGT | 2 cut(s) | 380, 1054 |
| BfaI | CTAG | 4 cut(s) | 134, 381, 1029, 1055 |
| BfuI | GTATCC | 1 cut(s) | 1594 |
| BglII | AGATCT | 1 cut(s) | 1579 |
| BisI | GCNGC | 2 cut(s) | 759, 1425 |
| BlsI | GCNGC | 2 cut(s) | 760, 1426 |
| Bme1390I | CCNGG | 2 cut(s) | 101, 112 |
| BmiI | GGNNCC | 5 cut(s) | 261, 419, 694, 746, 1462 |
| BmrFI | CCNGG | 2 cut(s) | 101, 112 |
| BmrI | ACTGGG | 1 cut(s) | 698 |
| BmsI | GCATC | 1 cut(s) | 865 |
| BmuI | ACTGGG | 1 cut(s) | 698 |
| BpiI | GAAGAC | 1 cut(s) | 474 |
| BpmI | CTGGAG | 2 cut(s) | 1350, 1626 |
| Bpu14I | TTCGAA | 1 cut(s) | 922 |
| BpuEI | CTTGAG | 2 cut(s) | 1292, 1373 |
| Bsa29I | ATCGAT | 1 cut(s) | 1009 |
| BsaBI | GATNNNNATC | 4 cut(s) | 87, 1329, 1443, 1578 |
| BsaJI | CCNNGG | 7 cut(s) | 110, 111, 337, 516, 608, 633, 696 |
| BsaWI | WCCGGW | 1 cut(s) | 420 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 694, 724 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 209, 517, 702, 754 |
| Bse1I | ACTGG | 3 cut(s) | 693, 1104, 1609 |
| Bse3DI | GCAATG | 1 cut(s) | 1147 |
| Bse8I | GATNNNNATC | 4 cut(s) | 87, 1329, 1443, 1578 |
| BseAI | TCCGGA | 1 cut(s) | 420 |
| BseBI | CCWGG | 2 cut(s) | 101, 112 |
| BseCI | ATCGAT | 1 cut(s) | 1009 |
| BseDI | CCNNGG | 7 cut(s) | 110, 111, 337, 516, 608, 633, 696 |
| BseGI | GGATG | 5 cut(s) | 15, 376, 1213, 1294, 1636 |
| BseJI | GATNNNNATC | 4 cut(s) | 87, 1329, 1443, 1578 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 209, 517, 702, 754 |
| BseMI | GCAATG | 1 cut(s) | 1147 |
| BseMII | CTCAG | 3 cut(s) | 188, 266, 663 |
| BseNI | ACTGG | 3 cut(s) | 693, 1104, 1609 |
| BseRI | GAGGAG | 5 cut(s) | 1031, 1221, 1302, 1380, 1383 |
| BseXI | GCAGC | 2 cut(s) | 745, 1436 |
| BsgI | GTGCAG | 1 cut(s) | 377 |
| BshFI | GGCC | 2 cut(s) | 99, 791 |
| BshVI | ATCGAT | 1 cut(s) | 1009 |
| BsiSI | CCGG | 1 cut(s) | 421 |
| BslFI | GGGAC | 3 cut(s) | 137, 635, 1092 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 209, 517, 702, 754 |
| BsmAI | GTCTC | 1 cut(s) | 1042 |
| BsmFI | GGGAC | 3 cut(s) | 137, 635, 1092 |
| BsnI | GGCC | 2 cut(s) | 99, 791 |
| Bsp119I | TTCGAA | 1 cut(s) | 922 |
| Bsp1286I | GDGCHC | 3 cut(s) | 111, 203, 695 |
| Bsp13I | TCCGGA | 1 cut(s) | 420 |
| BspACI | CCGC | 3 cut(s) | 237, 511, 934 |
| BspANI | GGCC | 2 cut(s) | 99, 791 |
| BspCNI | CTCAG | 3 cut(s) | 189, 265, 662 |
| BspDI | ATCGAT | 1 cut(s) | 1009 |
| BspEI | TCCGGA | 1 cut(s) | 420 |
| BspHI | TCATGA | 1 cut(s) | 1447 |
| BspLI | GGNNCC | 5 cut(s) | 261, 419, 694, 746, 1462 |
| BspPI | GGATC | 3 cut(s) | 227, 1455, 1468 |
| BspQI | GCTCTTC | 3 cut(s) | 99, 597, 1653 |
| BspT104I | TTCGAA | 1 cut(s) | 922 |
| BsrBI | CCGCTC | 1 cut(s) | 934 |
| BsrDI | GCAATG | 1 cut(s) | 1147 |
| BsrI | ACTGG | 3 cut(s) | 693, 1104, 1609 |
| BssECI | CCNNGG | 7 cut(s) | 110, 111, 337, 516, 608, 633, 696 |
| BssNAI | GTATAC | 1 cut(s) | 378 |
| BssT1I | CCWWGG | 3 cut(s) | 337, 608, 696 |
| Bst1107I | GTATAC | 1 cut(s) | 378 |
| Bst2UI | CCWGG | 2 cut(s) | 101, 112 |
| Bst4CI | ACNGT | 3 cut(s) | 1114, 1406, 1661 |
| Bst6I | CTCTTC | 8 cut(s) | 99, 308, 597, 718, 873, 980, 1530, 1653 |
| BstBI | TTCGAA | 1 cut(s) | 922 |
| BstC8I | GCNNGC | 1 cut(s) | 1225 |
| BstDEI | CTNAG | 5 cut(s) | 197, 252, 323, 649, 830 |
| BstDSI | CCRYGG | 2 cut(s) | 516, 633 |
| BstF5I | GGATG | 5 cut(s) | 15, 376, 1213, 1294, 1636 |
| BstMAI | GTCTC | 1 cut(s) | 1042 |
| BstNI | CCWGG | 2 cut(s) | 101, 112 |
| BstNSI | RCATGY | 1 cut(s) | 356 |
| BstSCI | CCNGG | 2 cut(s) | 99, 110 |
| BstV1I | GCAGC | 2 cut(s) | 745, 1436 |
| BstV2I | GAAGAC | 1 cut(s) | 474 |
| BstX2I | RGATCY | 2 cut(s) | 1460, 1579 |
| BstYI | RGATCY | 2 cut(s) | 1460, 1579 |
| BstZ17I | GTATAC | 1 cut(s) | 378 |
| Bsu15I | ATCGAT | 1 cut(s) | 1009 |
| BsuI | GTATCC | 1 cut(s) | 1594 |
| BsuRI | GGCC | 2 cut(s) | 99, 791 |
| BsuTUI | ATCGAT | 1 cut(s) | 1009 |
| BtgI | CCRYGG | 2 cut(s) | 516, 633 |
| BtgZI | GCGATG | 1 cut(s) | 1587 |
| BtsCI | GGATG | 5 cut(s) | 15, 376, 1213, 1294, 1636 |
| BtsI | GCAGTG | 2 cut(s) | 29, 365 |
| BtsIMutI | CAGTG | 3 cut(s) | 29, 365, 1119 |
| Cac8I | GCNNGC | 1 cut(s) | 1225 |
| CciI | TCATGA | 1 cut(s) | 1447 |
| ClaI | ATCGAT | 1 cut(s) | 1009 |
| Csp6I | GTAC | 5 cut(s) | 538, 661, 738, 883, 937 |
| CviQI | GTAC | 5 cut(s) | 538, 661, 738, 883, 937 |
| DdeI | CTNAG | 5 cut(s) | 197, 252, 323, 649, 830 |
| DraIII | CACNNNGTG | 1 cut(s) | 452 |
| EaeI | YGGCCR | 1 cut(s) | 97 |
| Eam1104I | CTCTTC | 8 cut(s) | 99, 308, 597, 718, 873, 980, 1530, 1653 |
| EarI | CTCTTC | 8 cut(s) | 99, 308, 597, 718, 873, 980, 1530, 1653 |
| EciI | GGCGGA | 1 cut(s) | 500 |
| Eco130I | CCWWGG | 3 cut(s) | 337, 608, 696 |
| Eco24I | GRGCYC | 3 cut(s) | 111, 203, 695 |
| Eco32I | GATATC | 2 cut(s) | 131, 329 |
| EcoRI | GAATTC | 1 cut(s) | 969 |
| EcoRII | CCWGG | 2 cut(s) | 99, 110 |
| EcoRV | GATATC | 2 cut(s) | 131, 329 |
| EcoT14I | CCWWGG | 3 cut(s) | 337, 608, 696 |
| EcoT38I | GRGCYC | 3 cut(s) | 111, 203, 695 |
| ErhI | CCWWGG | 3 cut(s) | 337, 608, 696 |
| FaqI | GGGAC | 3 cut(s) | 137, 635, 1092 |
| FbaI | TGATCA | 1 cut(s) | 1249 |
| FblI | GTMKAC | 1 cut(s) | 377 |
| Fnu4HI | GCNGC | 2 cut(s) | 759, 1425 |
| FokI | GGATG | 5 cut(s) | 2, 383, 1220, 1301, 1643 |
| FriOI | GRGCYC | 3 cut(s) | 111, 203, 695 |
| Fsp4HI | GCNGC | 2 cut(s) | 759, 1425 |
| FspBI | CTAG | 4 cut(s) | 134, 381, 1029, 1055 |
| GluI | GCNGC | 2 cut(s) | 759, 1425 |
| GsuI | CTGGAG | 2 cut(s) | 1350, 1626 |
| HaeIII | GGCC | 2 cut(s) | 99, 791 |
| HapII | CCGG | 1 cut(s) | 421 |
| HincII | GTYRAC | 2 cut(s) | 841, 1567 |
| HindII | GTYRAC | 2 cut(s) | 841, 1567 |
| HindIII | AAGCTT | 1 cut(s) | 320 |
| HinfI | GANTC | 6 cut(s) | 26, 56, 250, 521, 848, 1067 |
| HpaI | GTTAAC | 1 cut(s) | 841 |
| HpaII | CCGG | 1 cut(s) | 421 |
| HphI | GGTGA | 2 cut(s) | 322, 1157 |
| Hpy166II | GTNNAC | 6 cut(s) | 378, 841, 885, 1507, 1567, 1657 |
| Hpy188I | TCNGA | 4 cut(s) | 255, 346, 652, 1072 |
| Hpy8I | GTNNAC | 6 cut(s) | 378, 841, 885, 1507, 1567, 1657 |
| Hpy99I | CGWCG | 1 cut(s) | 284 |
| HpyAV | CCTTC | 7 cut(s) | 192, 250, 776, 1209, 1290, 1371, 1395 |
| HpyCH4III | ACNGT | 3 cut(s) | 1114, 1406, 1661 |
| HpyCH4V | TGCA | 5 cut(s) | 358, 407, 856, 1063, 1484 |
| HpyF3I | CTNAG | 5 cut(s) | 197, 252, 323, 649, 830 |
| Kpn2I | TCCGGA | 1 cut(s) | 420 |
| Ksp22I | TGATCA | 1 cut(s) | 1249 |
| KspAI | GTTAAC | 1 cut(s) | 841 |
| LguI | GCTCTTC | 3 cut(s) | 99, 597, 1653 |
| LmnI | GCTCC | 4 cut(s) | 259, 423, 698, 1607 |
| Lsp1109I | GCAGC | 2 cut(s) | 745, 1436 |
| LweI | GCATC | 1 cut(s) | 865 |
| MaeI | CTAG | 4 cut(s) | 134, 381, 1029, 1055 |
| MaeIII | GTNAC | 1 cut(s) | 1406 |
| MbiI | CCGCTC | 1 cut(s) | 934 |
| MfeI | CAATTG | 4 cut(s) | 231, 303, 527, 810 |
| MflI | RGATCY | 2 cut(s) | 1460, 1579 |
| MhlI | GDGCHC | 3 cut(s) | 111, 203, 695 |
| MlsI | TGGCCA | 1 cut(s) | 99 |
| MluNI | TGGCCA | 1 cut(s) | 99 |
| MlyI | GAGTC | 4 cut(s) | 244, 515, 842, 1061 |
| MmeI | TCCRAC | 1 cut(s) | 227 |
| Mox20I | TGGCCA | 1 cut(s) | 99 |
| MroI | TCCGGA | 1 cut(s) | 420 |
| MscI | TGGCCA | 1 cut(s) | 99 |
| MseI | TTAA | 4 cut(s) | 188, 642, 840, 1080 |
| Msp20I | TGGCCA | 1 cut(s) | 99 |
| MspI | CCGG | 1 cut(s) | 421 |
| MspR9I | CCNGG | 2 cut(s) | 101, 112 |
| MunI | CAATTG | 4 cut(s) | 231, 303, 527, 810 |
| MvaI | CCWGG | 2 cut(s) | 101, 112 |
| NlaIV | GGNNCC | 5 cut(s) | 261, 419, 694, 746, 1462 |
| NmuCI | GTSAC | 1 cut(s) | 1406 |
| NspI | RCATGY | 1 cut(s) | 356 |
| NspV | TTCGAA | 1 cut(s) | 922 |
| PagI | TCATGA | 1 cut(s) | 1447 |
| PasI | CCCWGGG | 1 cut(s) | 111 |
| PciI | ACATGT | 1 cut(s) | 352 |
| PciSI | GCTCTTC | 3 cut(s) | 99, 597, 1653 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 288 |
| PfeI | GAWTC | 2 cut(s) | 26, 56 |
| PkrI | GCNGC | 2 cut(s) | 760, 1426 |
| PleI | GAGTC | 4 cut(s) | 244, 515, 842, 1061 |
| PpsI | GAGTC | 4 cut(s) | 244, 515, 842, 1061 |
| PscI | ACATGT | 1 cut(s) | 352 |
| Psp6I | CCWGG | 2 cut(s) | 99, 110 |
| PspGI | CCWGG | 2 cut(s) | 99, 110 |
| PspN4I | GGNNCC | 5 cut(s) | 261, 419, 694, 746, 1462 |
| PsuI | RGATCY | 2 cut(s) | 1460, 1579 |
| RsaI | GTAC | 5 cut(s) | 539, 662, 739, 884, 938 |
| RsaNI | GTAC | 5 cut(s) | 538, 661, 738, 883, 937 |
| SapI | GCTCTTC | 3 cut(s) | 99, 597, 1653 |
| SaqAI | TTAA | 4 cut(s) | 188, 642, 840, 1080 |
| SatI | GCNGC | 2 cut(s) | 759, 1425 |
| SchI | GAGTC | 4 cut(s) | 244, 515, 842, 1061 |
| ScrFI | CCNGG | 2 cut(s) | 101, 112 |
| SduI | GDGCHC | 3 cut(s) | 111, 203, 695 |
| SetI | ASST | 8 cut(s) | 44, 324, 393, 496, 539, 629, 657, 952 |
| SfaNI | GCATC | 1 cut(s) | 865 |
| SfuI | TTCGAA | 1 cut(s) | 922 |
| SmlI | CTYRAG | 2 cut(s) | 1271, 1352 |
| SmoI | CTYRAG | 2 cut(s) | 1271, 1352 |
| SpeI | ACTAGT | 2 cut(s) | 380, 1054 |
| SsiI | CCGC | 3 cut(s) | 237, 511, 934 |
| SspI | AATATT | 1 cut(s) | 1435 |
| SspMI | CTAG | 4 cut(s) | 134, 381, 1029, 1055 |
| StyD4I | CCNGG | 2 cut(s) | 99, 110 |
| StyI | CCWWGG | 3 cut(s) | 337, 608, 696 |
| TaaI | ACNGT | 3 cut(s) | 1114, 1406, 1661 |
| TaqI | TCGA | 4 cut(s) | 721, 922, 1009, 1046 |
| TatI | WGTACW | 2 cut(s) | 660, 882 |
| TfiI | GAWTC | 2 cut(s) | 26, 56 |
| Tru1I | TTAA | 4 cut(s) | 188, 642, 840, 1080 |
| Tru9I | TTAA | 4 cut(s) | 188, 642, 840, 1080 |
| TscAI | CASTG | 3 cut(s) | 36, 365, 1119 |
| TseFI | GTSAC | 1 cut(s) | 1406 |
| TseI | GCWGC | 2 cut(s) | 758, 1424 |
| Tsp45I | GTSAC | 1 cut(s) | 1406 |
| TspGWI | ACGGA | 3 cut(s) | 533, 622, 1256 |
| TspRI | CASTG | 3 cut(s) | 36, 365, 1119 |
| XapI | RAATTY | 4 cut(s) | 67, 615, 969, 1292 |
| XceI | RCATGY | 1 cut(s) | 356 |
| XmiI | GTMKAC | 1 cut(s) | 377 |
| XspI | CTAG | 4 cut(s) | 134, 381, 1029, 1055 |