No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0328971 RchiOBHm_Chr2g0116291 RchiOBHm_Chr2g0116331 RchiOBHm_Chr6g0255481 |
| rosa_laevigata | RLG00000018254 RLG00000018257 RLG00000018797 RLG00000023323 |
| rosa_multiflora | Rmu_sc0000982.1_g000046 |
| rosa_roxburghii | Rroxscaffold_2G00127340 Rroxscaffold_6G00393060 |
| rosa_samantha | Rh2AG261100 Rh2BG272200 Rh2BG272500 Rh2DG269300 Rh7DG431500 |
| rosa_wichuraiana | Rw1G007120 Rw2G020470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 132 |
| AciI | CCGC | 3 cut(s) | 130, 146, 182 |
| AclWI | GGATC | 1 cut(s) | 284 |
| AcoI | YGGCCR | 1 cut(s) | 92 |
| AcsI | RAATTY | 1 cut(s) | 331 |
| AfaI | GTAC | 1 cut(s) | 33 |
| AgsI | TTSAA | 1 cut(s) | 11 |
| AhlI | ACTAGT | 1 cut(s) | 307 |
| AlwI | GGATC | 1 cut(s) | 284 |
| AoxI | GGCC | 1 cut(s) | 92 |
| ApeKI | GCWGC | 5 cut(s) | 134, 143, 179, 275, 323 |
| ApoI | RAATTY | 1 cut(s) | 331 |
| AspLEI | GCGC | 1 cut(s) | 134 |
| BbvI | GCAGC | 5 cut(s) | 121, 130, 191, 262, 335 |
| BccI | CCATC | 1 cut(s) | 354 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 257, 291 |
| BcuI | ACTAGT | 1 cut(s) | 307 |
| BfaI | CTAG | 1 cut(s) | 308 |
| BfmI | CTRYAG | 1 cut(s) | 168 |
| BisI | GCNGC | 6 cut(s) | 130, 135, 144, 180, 276, 324 |
| BlsI | GCNGC | 6 cut(s) | 131, 136, 145, 181, 277, 325 |
| BmiI | GGNNCC | 1 cut(s) | 226 |
| BmsI | GCATC | 3 cut(s) | 69, 97, 202 |
| BsaJI | CCNNGG | 1 cut(s) | 220 |
| BseDI | CCNNGG | 1 cut(s) | 220 |
| BseXI | GCAGC | 5 cut(s) | 121, 130, 191, 262, 335 |
| Bsh1236I | CGCG | 1 cut(s) | 132 |
| BshFI | GGCC | 1 cut(s) | 94 |
| BslFI | GGGAC | 3 cut(s) | 84, 269, 350 |
| BsmFI | GGGAC | 3 cut(s) | 84, 269, 350 |
| BsnI | GGCC | 1 cut(s) | 94 |
| Bsp143I | GATC | 1 cut(s) | 289 |
| Bsp19I | CCATGG | 1 cut(s) | 220 |
| BspACI | CCGC | 3 cut(s) | 130, 146, 182 |
| BspANI | GGCC | 1 cut(s) | 94 |
| BspFNI | CGCG | 1 cut(s) | 132 |
| BspHI | TCATGA | 1 cut(s) | 208 |
| BspLI | GGNNCC | 1 cut(s) | 226 |
| BspPI | GGATC | 1 cut(s) | 284 |
| BssECI | CCNNGG | 1 cut(s) | 220 |
| BssMI | GATC | 1 cut(s) | 289 |
| BssT1I | CCWWGG | 1 cut(s) | 220 |
| Bst4CI | ACNGT | 2 cut(s) | 160, 229 |
| BstDEI | CTNAG | 1 cut(s) | 26 |
| BstDSI | CCRYGG | 1 cut(s) | 220 |
| BstFNI | CGCG | 1 cut(s) | 132 |
| BstHHI | GCGC | 1 cut(s) | 134 |
| BstKTI | GATC | 1 cut(s) | 292 |
| BstMBI | GATC | 1 cut(s) | 289 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 140, 143, 152, 188 |
| BstNSI | RCATGY | 1 cut(s) | 42 |
| BstSFI | CTRYAG | 1 cut(s) | 168 |
| BstUI | CGCG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 5 cut(s) | 121, 130, 191, 262, 335 |
| BsuRI | GGCC | 1 cut(s) | 94 |
| BtgI | CCRYGG | 1 cut(s) | 220 |
| BtgZI | GCGATG | 1 cut(s) | 282 |
| CciI | TCATGA | 1 cut(s) | 208 |
| CfoI | GCGC | 1 cut(s) | 134 |
| Csp6I | GTAC | 1 cut(s) | 32 |
| CviJI | RGCY | 2 cut(s) | 94, 167 |
| CviKI_1 | RGCY | 2 cut(s) | 94, 167 |
| CviQI | GTAC | 1 cut(s) | 32 |
| DdeI | CTNAG | 1 cut(s) | 26 |
| DpnI | GATC | 1 cut(s) | 291 |
| DpnII | GATC | 1 cut(s) | 289 |
| EaeI | YGGCCR | 1 cut(s) | 92 |
| Eco130I | CCWWGG | 1 cut(s) | 220 |
| EcoT14I | CCWWGG | 1 cut(s) | 220 |
| ErhI | CCWWGG | 1 cut(s) | 220 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 89, 121 |
| FaqI | GGGAC | 3 cut(s) | 84, 269, 350 |
| Fnu4HI | GCNGC | 6 cut(s) | 130, 135, 144, 180, 276, 324 |
| Fsp4HI | GCNGC | 6 cut(s) | 130, 135, 144, 180, 276, 324 |
| FspBI | CTAG | 1 cut(s) | 308 |
| GlaI | GCGC | 1 cut(s) | 133 |
| GluI | GCNGC | 6 cut(s) | 130, 135, 144, 180, 276, 324 |
| HaeIII | GGCC | 1 cut(s) | 94 |
| HhaI | GCGC | 1 cut(s) | 134 |
| Hin6I | GCGC | 1 cut(s) | 132 |
| HinP1I | GCGC | 1 cut(s) | 132 |
| HinfI | GANTC | 1 cut(s) | 101 |
| Hpy188I | TCNGA | 1 cut(s) | 123 |
| Hpy188III | TCNNGA | 2 cut(s) | 209, 367 |
| HpyAV | CCTTC | 1 cut(s) | 260 |
| HpyCH4III | ACNGT | 2 cut(s) | 160, 229 |
| HpyCH4V | TGCA | 8 cut(s) | 60, 88, 155, 179, 215, 302, 323, 338 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 140, 143, 152, 188 |
| HpyF3I | CTNAG | 1 cut(s) | 26 |
| HspAI | GCGC | 1 cut(s) | 132 |
| Kzo9I | GATC | 1 cut(s) | 289 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| LpnPI | CCDG | 2 cut(s) | 149, 153 |
| Lsp1109I | GCAGC | 5 cut(s) | 121, 130, 191, 262, 335 |
| LweI | GCATC | 3 cut(s) | 69, 97, 202 |
| MaeI | CTAG | 1 cut(s) | 308 |
| MaeIII | GTNAC | 1 cut(s) | 196 |
| MalI | GATC | 1 cut(s) | 291 |
| MboI | GATC | 1 cut(s) | 289 |
| MluCI | AATT | 2 cut(s) | 231, 331 |
| MnlI | CCTC | 1 cut(s) | 129 |
| MslI | CAYNNNNRTG | 2 cut(s) | 318, 354 |
| MspA1I | CMGCKG | 1 cut(s) | 182 |
| MvnI | CGCG | 1 cut(s) | 132 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 140, 143, 152, 188 |
| NcoI | CCATGG | 1 cut(s) | 220 |
| NdeII | GATC | 1 cut(s) | 289 |
| NlaIV | GGNNCC | 1 cut(s) | 226 |
| NspI | RCATGY | 1 cut(s) | 42 |
| PagI | TCATGA | 1 cut(s) | 208 |
| PfeI | GAWTC | 1 cut(s) | 101 |
| PkrI | GCNGC | 6 cut(s) | 131, 136, 145, 181, 277, 325 |
| PspN4I | GGNNCC | 1 cut(s) | 226 |
| RsaI | GTAC | 1 cut(s) | 33 |
| RsaNI | GTAC | 1 cut(s) | 32 |
| RseI | CAYNNNNRTG | 2 cut(s) | 318, 354 |
| SatI | GCNGC | 6 cut(s) | 130, 135, 144, 180, 276, 324 |
| Sau3AI | GATC | 1 cut(s) | 289 |
| SetI | ASST | 1 cut(s) | 9 |
| SfaNI | GCATC | 3 cut(s) | 69, 97, 202 |
| SfcI | CTRYAG | 1 cut(s) | 168 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 318, 354 |
| SpeI | ACTAGT | 1 cut(s) | 307 |
| Sse9I | AATT | 2 cut(s) | 231, 331 |
| SsiI | CCGC | 3 cut(s) | 130, 146, 182 |
| SspMI | CTAG | 1 cut(s) | 308 |
| StyI | CCWWGG | 1 cut(s) | 220 |
| TaaI | ACNGT | 2 cut(s) | 160, 229 |
| TasI | AATT | 2 cut(s) | 231, 331 |
| TatI | WGTACW | 1 cut(s) | 31 |
| TauI | GCSGC | 1 cut(s) | 132 |
| TfiI | GAWTC | 1 cut(s) | 101 |
| TseI | GCWGC | 5 cut(s) | 134, 143, 179, 275, 323 |
| TspDTI | ATGAA | 7 cut(s) | 17, 140, 164, 197, 302, 308, 350 |
| XapI | RAATTY | 1 cut(s) | 331 |
| XceI | RCATGY | 1 cut(s) | 42 |
| XspI | CTAG | 1 cut(s) | 308 |