Rh7DG431500

Functions as actin-binding component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
61293121 .. 61296164
3044 bp
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UTR
Exon/CDS
Intron
Rh7DG431500.1

Sequence Viewer

Length: 360 bp
ATGAAGCAGCCTGCTTTGAGGACTTTTGCTTCCGATGTTGATCCACTTGTTGCTCTTGTGCATCAGCCAAAGAAATCCTTTTTCCTTATTCCTCAGAAATGTCGCGCTGCTCCTGCTGCGGTTCATGCAACAGTTCAGGCTGTGATTCATGCAGCGGTAAATGCTGTGGTTCATACAAGGGTTCATGATGCGGTCCATGTAACCGTAATTTGTGTTTCAGTTGCCCTTCACTACCAAAGTGGTGATGTTGCTGCTCATGTCCCCGATCCCGTTACTGCAAAACTAGTTCATGTTCATGCAGCAGAAATTGCTGCATTTTACCATCATGTTCGTGTTCGTGTCCCGATTGCTCTTGTTTGA

Protein Analysis

119

Amino Acids

12.79

Weight (kDa)

9.44

Isoelectric Point (pI)

36.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 105
AciI CCGC 3 cut(s) 119, 155, 191
AclWI GGATC 2 cut(s) 35, 260
AhlI ACTAGT 1 cut(s) 283
AlwI GGATC 2 cut(s) 35, 260
ApeKI GCWGC 7 cut(s) 7, 107, 116, 152, 251, 299, 311
AspLEI GCGC 1 cut(s) 107
AspS9I GGNCC 1 cut(s) 193
AsuHPI GGTGA 1 cut(s) 254
AvaII GGWCC 1 cut(s) 193
BbvI GCAGC 7 cut(s) 19, 94, 103, 164, 238, 298, 311
BccI CCATC 1 cut(s) 330
BcuI ACTAGT 1 cut(s) 283
BfaI CTAG 1 cut(s) 284
BisI GCNGC 7 cut(s) 8, 108, 117, 153, 252, 300, 312
BlsI GCNGC 7 cut(s) 9, 109, 118, 154, 253, 301, 313
Bme18I GGWCC 1 cut(s) 193
BmgT120I GGNCC 1 cut(s) 193
BmsI GCATC 2 cut(s) 70, 178
BsaBI GATNNNNATC 1 cut(s) 39
Bse8I GATNNNNATC 1 cut(s) 39
BseJI GATNNNNATC 1 cut(s) 39
BseMII CTCAG 1 cut(s) 107
BseXI GCAGC 7 cut(s) 19, 94, 103, 164, 238, 298, 311
Bsh1236I CGCG 1 cut(s) 105
BslFI GGGAC 2 cut(s) 245, 326
BsmFI GGGAC 2 cut(s) 245, 326
Bsp143I GATC 2 cut(s) 40, 265
BspACI CCGC 3 cut(s) 119, 155, 191
BspCNI CTCAG 1 cut(s) 106
BspFNI CGCG 1 cut(s) 105
BspHI TCATGA 1 cut(s) 184
BspPI GGATC 2 cut(s) 35, 260
BssMI GATC 2 cut(s) 40, 265
Bst4CI ACNGT 2 cut(s) 133, 205
BstAPI GCANNNNNTGC 1 cut(s) 308
BstC8I GCNNGC 1 cut(s) 12
BstDEI CTNAG 1 cut(s) 93
BstFNI CGCG 1 cut(s) 105
BstHHI GCGC 1 cut(s) 107
BstKTI GATC 2 cut(s) 43, 268
BstMBI GATC 2 cut(s) 40, 265
BstMWI GCNNNNNNNGC 5 cut(s) 113, 116, 125, 161, 308
BstUI CGCG 1 cut(s) 105
BstV1I GCAGC 7 cut(s) 19, 94, 103, 164, 238, 298, 311
Cac8I GCNNGC 1 cut(s) 12
CciI TCATGA 1 cut(s) 184
CfoI GCGC 1 cut(s) 107
Cfr13I GGNCC 1 cut(s) 193
CviAII CATG 8 cut(s) 125, 149, 185, 197, 257, 290, 296, 326
CviJI RGCY 3 cut(s) 10, 67, 140
CviKI_1 RGCY 3 cut(s) 10, 67, 140
DdeI CTNAG 1 cut(s) 93
DpnI GATC 2 cut(s) 42, 267
DpnII GATC 2 cut(s) 40, 265
Eco47I GGWCC 1 cut(s) 193
FaeI CATG 8 cut(s) 128, 152, 188, 200, 260, 293, 299, 329
FaiI YATR 9 cut(s) 126, 150, 174, 186, 198, 258, 291, 297, 327
FalI AAGNNNNNCTT 2 cut(s) 62, 94
FaqI GGGAC 2 cut(s) 245, 326
FatI CATG 8 cut(s) 124, 148, 184, 196, 256, 289, 295, 325
Fnu4HI GCNGC 7 cut(s) 8, 108, 117, 153, 252, 300, 312
Fsp4HI GCNGC 7 cut(s) 8, 108, 117, 153, 252, 300, 312
FspBI CTAG 1 cut(s) 284
GlaI GCGC 1 cut(s) 106
GluI GCNGC 7 cut(s) 8, 108, 117, 153, 252, 300, 312
HhaI GCGC 1 cut(s) 107
Hin1II CATG 8 cut(s) 128, 152, 188, 200, 260, 293, 299, 329
Hin6I GCGC 1 cut(s) 105
HinP1I GCGC 1 cut(s) 105
HinfI GANTC 1 cut(s) 145
HphI GGTGA 1 cut(s) 254
Hpy188I TCNGA 2 cut(s) 34, 96
Hpy188III TCNNGA 2 cut(s) 185, 343
HpyAV CCTTC 1 cut(s) 236
HpyCH4III ACNGT 2 cut(s) 133, 205
HpyCH4V TGCA 6 cut(s) 61, 128, 152, 278, 299, 314
HpyF10VI GCNNNNNNNGC 5 cut(s) 113, 116, 125, 161, 308
HpyF3I CTNAG 1 cut(s) 93
Hsp92II CATG 8 cut(s) 128, 152, 188, 200, 260, 293, 299, 329
HspAI GCGC 1 cut(s) 105
Kzo9I GATC 2 cut(s) 40, 265
LmnI GCTCC 1 cut(s) 115
LpnPI CCDG 3 cut(s) 24, 122, 126
Lsp1109I GCAGC 7 cut(s) 19, 94, 103, 164, 238, 298, 311
LweI GCATC 2 cut(s) 70, 178
MaeI CTAG 1 cut(s) 284
MaeIII GTNAC 2 cut(s) 199, 271
MalI GATC 2 cut(s) 42, 267
MboI GATC 2 cut(s) 40, 265
MluCI AATT 2 cut(s) 207, 306
MnlI CCTC 2 cut(s) 12, 102
MslI CAYNNNNRTG 2 cut(s) 294, 330
MspA1I CMGCKG 1 cut(s) 155
MvnI CGCG 1 cut(s) 105
MwoI GCNNNNNNNGC 5 cut(s) 113, 116, 125, 161, 308
NdeII GATC 2 cut(s) 40, 265
NlaIII CATG 8 cut(s) 128, 152, 188, 200, 260, 293, 299, 329
PagI TCATGA 1 cut(s) 184
PfeI GAWTC 1 cut(s) 145
PkrI GCNGC 7 cut(s) 9, 109, 118, 154, 253, 301, 313
PspPI GGNCC 1 cut(s) 193
RseI CAYNNNNRTG 2 cut(s) 294, 330
SatI GCNGC 7 cut(s) 8, 108, 117, 153, 252, 300, 312
Sau3AI GATC 2 cut(s) 40, 265
Sau96I GGNCC 1 cut(s) 193
SfaNI GCATC 2 cut(s) 70, 178
SinI GGWCC 1 cut(s) 193
SmiMI CAYNNNNRTG 2 cut(s) 294, 330
SpeI ACTAGT 1 cut(s) 283
Sse9I AATT 2 cut(s) 207, 306
SsiI CCGC 3 cut(s) 119, 155, 191
SspMI CTAG 1 cut(s) 284
TaaI ACNGT 2 cut(s) 133, 205
TasI AATT 2 cut(s) 207, 306
TfiI GAWTC 1 cut(s) 145
TseI GCWGC 7 cut(s) 7, 107, 116, 152, 251, 299, 311
TspDTI ATGAA 7 cut(s) 17, 113, 137, 161, 173, 278, 284
VpaK11BI GGWCC 1 cut(s) 193
XspI CTAG 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.