Rh2CG246400

Ras-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
25847816 .. 25860220
12405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG246400.1

Sequence Viewer

Length: 1260 bp
ATGGCGACGGTGTCCCCTCTGGCGAAATACAAGCTCGTCTTCCTCGGCGATCAGTCCGTCGGCAAAACCAGCATCATCACCCGCTTCATGTATGACAAATTCGATTCAACCTATCAGGCTACGATTGGAATTGATTTTCTGTCGAAAACCATGTACCTTGAAGATCGGACAGTTCGTTTGCAGCTTTGGGATACTGCCGGGCAAGAGAGGTTTAGGAGTCTCATTCCAAGCTACATCAGGGATTCTTCTGTTGCAGTAATCGTCTATGATGTAGCTAATAGACAATCATTTCTGAACACTAATAAATGGATTGAAGAAGTACGAACAGAACGGGGTACTGATGTCATTATCGTGCTTGTTGGGAACAAAACTGATCTCGTTGATAAGAGACAAGTTTCTATAGAGGAAGGAGATTCCAAATCTCGTGAGTTTGGAGTCATGTTCATAGAAACCAGCGCCAAAGCAGGATTCAATATCAAGCCACTATTCCGTAAGATTGCTTCTGCGCTGCCAGGGATGGAAACCCTTTCCTCCACAAAACAGGAAGATATGGTTGATGTAAACCTGAAGCCCACTGTCAATTCATCCAACGCAGATCAGCAAGGGGGAGAGAGCCTCGACTTCGACTCCATCAGTGGCCAGGACTTCGCATTGGAAGACGGCGCCACCTTCTGCTCCGCCTACCCCTTCTCCGGCGTCGCCGAGAACCTCGTCCTCCAGGAGAAGCTCTCGCATTACTTGGACCCAGAAGACCCAGAACTGTGTTGTTGGAGACACCCAGAGCTAGAAAATGGGGCCGACGATATCACTGTCGGAGCAGTGCACAGACAACAAAAAGACAAGGTGGAGCTTCACCTGGTGAAGGAGATCTCGGTCCGATCAAACTCCTTCTTTGAGTCTCAGAGCCAGTTGGAGGATTTGTATGTGAAGATCGTTGAGGTATGCAATCGGATTCGGGAGCTTAAGGAGACCATTTTTCTGTTGGATGTGGATTTGGTGGACTCTACGAGGCAGATTCAAGAGCTCAATGTTACCAGGAGTAATTTGTTGGCTCTTCAACAGAAGCTGAGGCTGATTCTCTATGTCAATCAAGCTCTTTCGGTTCTCAAACTGCTTGTTGCCTCTGCAGATTGTGCTGGAGCTTTGGATGTCACAGATGACCTACAACATTTGCTGAGCAGCTCCACTCGGAGGTCATCATCCATTGAAGCAGTTTCATTGCAAAACCTTGTGTATAGAAATGTAGTTGCGTTTGTATAA

Protein Analysis

419

Amino Acids

47.05

Weight (kDa)

4.95

Isoelectric Point (pI)

47.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arf PF00025 9 - 130 1.4e-13 ADP-ribosylation factor family
Ras PF00071 11 - 169 1e-56 Ras family
Roc PF08477 11 - 125 6e-37 Ras of Complex, Roc, domain of DAPkinase
GTP_EFTU PF00009 43 - 171 6.8e-06 Elongation factor Tu GTP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 662
AciI CCGC 2 cut(s) 82, 678
AcoI YGGCCR 1 cut(s) 637
AcsI RAATTY 1 cut(s) 98
AcuI CTGAAG 1 cut(s) 587
AcyI GRCGYC 2 cut(s) 663, 696
AdeI CACNNNGTG 1 cut(s) 859
AfaI GTAC 3 cut(s) 155, 321, 337
AfiI CCNNNNNNNGG 4 cut(s) 692, 862, 913, 1191
AflII CTTAAG 1 cut(s) 962
AgsI TTSAA 7 cut(s) 108, 161, 314, 472, 1019, 1058, 1208
AjnI CCWGG 5 cut(s) 511, 639, 717, 855, 1034
AjuI GAANNNNNNNTTGG 2 cut(s) 452, 484
Alw21I GWGCWC 2 cut(s) 825, 1026
Alw26I GTCTC 5 cut(s) 224, 382, 766, 903, 962
Alw44I GTGCAC 1 cut(s) 821
AlwNI CAGNNNCTG 1 cut(s) 1066
AoxI GGCC 2 cut(s) 637, 795
ApaLI GTGCAC 1 cut(s) 821
ApeKI GCWGC 3 cut(s) 181, 508, 1179
ApoI RAATTY 1 cut(s) 98
ArsI GACNNNNNNTTYG 2 cut(s) 160, 192
AspLEI GCGC 3 cut(s) 458, 508, 665
AspS9I GGNCC 3 cut(s) 742, 795, 874
AsuC2I CCSGG 1 cut(s) 199
AsuHPI GGTGA 3 cut(s) 70, 845, 871
AvaII GGWCC 2 cut(s) 742, 874
BaeGI GKGCMC 1 cut(s) 825
BaeI ACNNNNGTAYC 2 cut(s) 327, 360
BalI TGGCCA 1 cut(s) 639
BanI GGYRCC 1 cut(s) 662
BanII GRGCYC 1 cut(s) 1026
BarI GAAGNNNNNNTAC 2 cut(s) 484, 516
BauI CACGAG 1 cut(s) 423
BbsI GAAGAC 3 cut(s) 31, 663, 756
Bbv12I GWGCWC 2 cut(s) 825, 1026
BbvCI CCTCAGC 1 cut(s) 1067
BbvI GCAGC 3 cut(s) 193, 495, 1191
BccI CCATC 2 cut(s) 511, 638
BceAI ACGGC 1 cut(s) 676
BciT130I CCWGG 5 cut(s) 513, 641, 719, 857, 1036
BciVI GTATCC 1 cut(s) 184
BcnI CCSGG 1 cut(s) 199
BcoDI GTCTC 5 cut(s) 224, 382, 766, 903, 962
BfaI CTAG 1 cut(s) 785
BfmI CTRYAG 2 cut(s) 399, 1125
BfoI RGCGCY 2 cut(s) 459, 666
BfrI CTTAAG 1 cut(s) 962
BfuI GTATCC 1 cut(s) 184
BglII AGATCT 1 cut(s) 867
BisI GCNGC 3 cut(s) 182, 509, 1180
BlpI GCTNAGC 1 cut(s) 1175
BlsI GCNGC 3 cut(s) 183, 510, 1181
Bme1390I CCNGG 6 cut(s) 199, 513, 641, 719, 857, 1036
Bme18I GGWCC 2 cut(s) 742, 874
BmgT120I GGNCC 3 cut(s) 742, 795, 874
BmiI GGNNCC 3 cut(s) 664, 744, 796
BmrFI CCNGG 6 cut(s) 199, 513, 641, 719, 857, 1036
BmsI GCATC 1 cut(s) 81
BpiI GAAGAC 3 cut(s) 31, 663, 756
BplI GAGNNNNNCTC 4 cut(s) 600, 632, 713, 745
BpmI CTGGAG 2 cut(s) 701, 1158
Bpu10I CCTNAGC 1 cut(s) 1067
Bpu1102I GCTNAGC 1 cut(s) 1175
BpuMI CCSGG 1 cut(s) 199
BsaHI GRCGYC 2 cut(s) 663, 696
BsaI GGTCTC 1 cut(s) 962
BsaJI CCNNGG 2 cut(s) 43, 512
BsaXI ACNNNNNCTCC 6 cut(s) 611, 641, 674, 704, 905, 935
Bsc4I CCNNNNNNNGG 4 cut(s) 692, 862, 913, 1191
Bse1I ACTGG 1 cut(s) 907
Bse3DI GCAATG 1 cut(s) 1217
BseBI CCWGG 5 cut(s) 513, 641, 719, 857, 1036
BseDI CCNNGG 2 cut(s) 43, 512
BseGI GGATG 5 cut(s) 522, 584, 991, 1153, 1199
BseLI CCNNNNNNNGG 4 cut(s) 692, 862, 913, 1191
BseMI GCAATG 1 cut(s) 1217
BseMII CTCAG 3 cut(s) 914, 1058, 1166
BseNI ACTGG 1 cut(s) 907
BseSI GKGCMC 1 cut(s) 825
BseXI GCAGC 3 cut(s) 193, 495, 1191
BshFI GGCC 2 cut(s) 639, 797
BshNI GGYRCC 1 cut(s) 662
BsiHKAI GWGCWC 2 cut(s) 825, 1026
BsiSI CCGG 2 cut(s) 198, 693
BslI CCNNNNNNNGG 4 cut(s) 692, 862, 913, 1191
BsmAI GTCTC 5 cut(s) 224, 382, 766, 903, 962
BsnI GGCC 2 cut(s) 639, 797
Bso31I GGTCTC 1 cut(s) 962
Bsp1286I GDGCHC 2 cut(s) 825, 1026
Bsp143I GATC 7 cut(s) 49, 163, 373, 595, 867, 878, 930
Bsp1720I GCTNAGC 1 cut(s) 1175
BspACI CCGC 2 cut(s) 82, 678
BspANI GGCC 2 cut(s) 639, 797
BspCNI CTCAG 3 cut(s) 913, 1059, 1167
BspLI GGNNCC 3 cut(s) 664, 744, 796
BspMAI CTGCAG 1 cut(s) 1129
BspQI GCTCTTC 1 cut(s) 1059
BspT107I GGYRCC 1 cut(s) 662
BspTI CTTAAG 1 cut(s) 962
BspTNI GGTCTC 1 cut(s) 962
BsrDI GCAATG 1 cut(s) 1217
BsrI ACTGG 1 cut(s) 907
BssECI CCNNGG 2 cut(s) 43, 512
BssMI GATC 7 cut(s) 49, 163, 373, 595, 867, 878, 930
BssNI GRCGYC 2 cut(s) 663, 696
BssSI CACGAG 1 cut(s) 423
Bst2BI CACGAG 1 cut(s) 423
Bst2UI CCWGG 5 cut(s) 513, 641, 719, 857, 1036
Bst4CI ACNGT 5 cut(s) 10, 172, 577, 762, 811
Bst6I CTCTTC 1 cut(s) 1059
BstACI GRCGYC 2 cut(s) 663, 696
BstAFI CTTAAG 1 cut(s) 962
BstAPI GCANNNNNTGC 1 cut(s) 1133
BstDEI CTNAG 3 cut(s) 900, 1067, 1175
BstENI CCTNNNNNAGG 1 cut(s) 860
BstF5I GGATG 5 cut(s) 522, 584, 991, 1153, 1199
BstH2I RGCGCY 2 cut(s) 459, 666
BstHHI GCGC 3 cut(s) 458, 508, 665
BstKTI GATC 7 cut(s) 52, 166, 376, 598, 870, 881, 933
BstMAI GTCTC 5 cut(s) 224, 382, 766, 903, 962
BstMBI GATC 7 cut(s) 49, 163, 373, 595, 867, 878, 930
BstMWI GCNNNNNNNGC 2 cut(s) 69, 1133
BstNI CCWGG 5 cut(s) 513, 641, 719, 857, 1036
BstSCI CCNGG 6 cut(s) 197, 511, 639, 717, 855, 1034
BstSFI CTRYAG 2 cut(s) 399, 1125
BstSLI GKGCMC 1 cut(s) 825
BstV1I GCAGC 3 cut(s) 193, 495, 1191
BstV2I GAAGAC 3 cut(s) 31, 663, 756
BstX2I RGATCY 1 cut(s) 867
BstYI RGATCY 1 cut(s) 867
BsuI GTATCC 1 cut(s) 184
BsuRI GGCC 2 cut(s) 639, 797
BtsCI GGATG 5 cut(s) 522, 584, 991, 1153, 1199
BtsI GCAGTG 1 cut(s) 825
BtsIMutI CAGTG 4 cut(s) 573, 640, 807, 825
CaiI CAGNNNCTG 1 cut(s) 1066
CfoI GCGC 3 cut(s) 458, 508, 665
Cfr13I GGNCC 3 cut(s) 742, 795, 874
CpoI CGGWCCG 1 cut(s) 874
CseI GACGC 1 cut(s) 685
CsiI ACCWGGT 1 cut(s) 855
Csp6I GTAC 3 cut(s) 154, 320, 336
CspI CGGWCCG 1 cut(s) 874
CviAII CATG 3 cut(s) 88, 151, 439
CviQI GTAC 3 cut(s) 154, 320, 336
DdeI CTNAG 3 cut(s) 900, 1067, 1175
DinI GGCGCC 1 cut(s) 664
DpnI GATC 7 cut(s) 51, 165, 375, 597, 869, 880, 932
DpnII GATC 7 cut(s) 49, 163, 373, 595, 867, 878, 930
DraIII CACNNNGTG 1 cut(s) 859
EaeI YGGCCR 1 cut(s) 637
Eam1104I CTCTTC 1 cut(s) 1059
EarI CTCTTC 1 cut(s) 1059
EciI GGCGGA 1 cut(s) 667
Ecl136II GAGCTC 1 cut(s) 1024
Eco24I GRGCYC 1 cut(s) 1026
Eco31I GGTCTC 1 cut(s) 962
Eco32I GATATC 1 cut(s) 805
Eco47I GGWCC 2 cut(s) 742, 874
Eco53kI GAGCTC 1 cut(s) 1024
Eco57I CTGAAG 1 cut(s) 587
EcoICRI GAGCTC 1 cut(s) 1024
EcoNI CCTNNNNNAGG 1 cut(s) 860
EcoRII CCWGG 5 cut(s) 511, 639, 717, 855, 1034
EcoRV GATATC 1 cut(s) 805
EcoT38I GRGCYC 1 cut(s) 1026
EgeI GGCGCC 1 cut(s) 664
EheI GGCGCC 1 cut(s) 664
FaeI CATG 3 cut(s) 91, 154, 442
FalI AAGNNNNNCTT 2 cut(s) 23, 55
FatI CATG 3 cut(s) 87, 150, 438
FauI CCCGC 1 cut(s) 89
Fnu4HI GCNGC 3 cut(s) 182, 509, 1180
FokI GGATG 5 cut(s) 529, 571, 998, 1160, 1186
FriOI GRGCYC 1 cut(s) 1026
Fsp4HI GCNGC 3 cut(s) 182, 509, 1180
FspBI CTAG 1 cut(s) 785
GlaI GCGC 3 cut(s) 457, 507, 664
GluI GCNGC 3 cut(s) 182, 509, 1180
GsuI CTGGAG 2 cut(s) 701, 1158
HaeII RGCGCY 2 cut(s) 459, 666
HaeIII GGCC 2 cut(s) 639, 797
HapII CCGG 2 cut(s) 198, 693
HgaI GACGC 1 cut(s) 685
HhaI GCGC 3 cut(s) 458, 508, 665
Hin1I GRCGYC 2 cut(s) 663, 696
Hin1II CATG 3 cut(s) 91, 154, 442
Hin6I GCGC 3 cut(s) 456, 506, 663
HinP1I GCGC 3 cut(s) 456, 506, 663
HpaII CCGG 2 cut(s) 198, 693
HphI GGTGA 3 cut(s) 70, 845, 871
Hpy166II GTNNAC 3 cut(s) 562, 823, 1000
Hpy188I TCNGA 7 cut(s) 168, 294, 815, 878, 903, 951, 1191
Hpy188III TCNNGA 3 cut(s) 425, 956, 1019
Hpy8I GTNNAC 3 cut(s) 562, 823, 1000
Hpy99I CGWCG 4 cut(s) 10, 62, 701, 803
HpyAV CCTTC 5 cut(s) 401, 679, 697, 856, 898
HpyCH4III ACNGT 5 cut(s) 10, 172, 577, 762, 811
HpyCH4V TGCA 6 cut(s) 181, 254, 823, 945, 1127, 1222
HpyF10VI GCNNNNNNNGC 2 cut(s) 69, 1133
HpyF3I CTNAG 3 cut(s) 900, 1067, 1175
Hsp92I GRCGYC 2 cut(s) 663, 696
Hsp92II CATG 3 cut(s) 91, 154, 442
HspAI GCGC 3 cut(s) 456, 506, 663
KasI GGCGCC 1 cut(s) 662
Kzo9I GATC 7 cut(s) 49, 163, 373, 595, 867, 878, 930
LguI GCTCTTC 1 cut(s) 1059
LmnI GCTCC 6 cut(s) 680, 815, 847, 958, 1139, 1187
Lsp1109I GCAGC 3 cut(s) 193, 495, 1191
LweI GCATC 1 cut(s) 81
MabI ACCWGGT 1 cut(s) 855
MaeI CTAG 1 cut(s) 785
MaeIII GTNAC 2 cut(s) 1030, 1150
MalI GATC 7 cut(s) 51, 165, 375, 597, 869, 880, 932
MboI GATC 7 cut(s) 49, 163, 373, 595, 867, 878, 930
MboII GAAGA 9 cut(s) 31, 173, 237, 326, 557, 668, 761, 940, 1046
MflI RGATCY 1 cut(s) 867
MhlI GDGCHC 2 cut(s) 825, 1026
MlsI TGGCCA 1 cut(s) 639
MluCI AATT 4 cut(s) 98, 129, 580, 1042
MluNI TGGCCA 1 cut(s) 639
Mly113I GGCGCC 1 cut(s) 663
MlyI GAGTC 5 cut(s) 226, 444, 620, 905, 995
MmeI TCCRAC 5 cut(s) 612, 749, 793, 891, 963
Mox20I TGGCCA 1 cut(s) 639
MscI TGGCCA 1 cut(s) 639
MseI TTAA 1 cut(s) 963
MslI CAYNNNNRTG 1 cut(s) 350
Msp20I TGGCCA 1 cut(s) 639
MspCI CTTAAG 1 cut(s) 962
MspI CCGG 2 cut(s) 198, 693
MspR9I CCNGG 6 cut(s) 199, 513, 641, 719, 857, 1036
MvaI CCWGG 5 cut(s) 513, 641, 719, 857, 1036
MwoI GCNNNNNNNGC 2 cut(s) 69, 1133
NarI GGCGCC 1 cut(s) 663
NciI CCSGG 1 cut(s) 199
NdeII GATC 7 cut(s) 49, 163, 373, 595, 867, 878, 930
NlaIII CATG 3 cut(s) 91, 154, 442
NlaIV GGNNCC 3 cut(s) 664, 744, 796
NmeAIII GCCGAG 2 cut(s) 24, 727
NmuCI GTSAC 1 cut(s) 1150
PciSI GCTCTTC 1 cut(s) 1059
PcsI WCGNNNNNNNCGW 1 cut(s) 172
PfeI GAWTC 7 cut(s) 104, 242, 413, 468, 952, 1015, 1075
PflFI GACNNNGTC 1 cut(s) 10
PfoI TCCNGGA 1 cut(s) 717
PkrI GCNGC 3 cut(s) 183, 510, 1181
PleI GAGTC 5 cut(s) 225, 443, 620, 904, 995
PluTI GGCGCC 1 cut(s) 666
PpsI GAGTC 5 cut(s) 225, 443, 620, 904, 995
Psp124BI GAGCTC 1 cut(s) 1026
Psp6I CCWGG 5 cut(s) 511, 639, 717, 855, 1034
PspGI CCWGG 5 cut(s) 511, 639, 717, 855, 1034
PspN4I GGNNCC 3 cut(s) 664, 744, 796
PspPI GGNCC 3 cut(s) 742, 795, 874
PstI CTGCAG 1 cut(s) 1129
PstNI CAGNNNCTG 1 cut(s) 1066
PsuI RGATCY 1 cut(s) 867
PsyI GACNNNGTC 1 cut(s) 10
RsaI GTAC 3 cut(s) 155, 321, 337
RsaNI GTAC 3 cut(s) 154, 320, 336
RseI CAYNNNNRTG 1 cut(s) 350
Rsr2I CGGWCCG 1 cut(s) 874
RsrII CGGWCCG 1 cut(s) 874
SacI GAGCTC 1 cut(s) 1026
SapI GCTCTTC 1 cut(s) 1059
SaqAI TTAA 1 cut(s) 963
SatI GCNGC 3 cut(s) 182, 509, 1180
Sau3AI GATC 7 cut(s) 49, 163, 373, 595, 867, 878, 930
Sau96I GGNCC 3 cut(s) 742, 795, 874
SchI GAGTC 5 cut(s) 226, 444, 620, 905, 995
ScrFI CCNGG 6 cut(s) 199, 513, 641, 719, 857, 1036
SduI GDGCHC 2 cut(s) 825, 1026
SexAI ACCWGGT 1 cut(s) 855
SfaNI GCATC 1 cut(s) 81
SfcI CTRYAG 2 cut(s) 399, 1125
SfoI GGCGCC 1 cut(s) 664
SinI GGWCC 2 cut(s) 742, 874
SmiMI CAYNNNNRTG 1 cut(s) 350
SmlI CTYRAG 1 cut(s) 962
SmoI CTYRAG 1 cut(s) 962
Sse9I AATT 4 cut(s) 98, 129, 580, 1042
SsiI CCGC 2 cut(s) 82, 678
SspDI GGCGCC 1 cut(s) 662
SspMI CTAG 1 cut(s) 785
SstI GAGCTC 1 cut(s) 1026
StyD4I CCNGG 6 cut(s) 197, 511, 639, 717, 855, 1034
TaaI ACNGT 5 cut(s) 10, 172, 577, 762, 811
TaqI TCGA 4 cut(s) 102, 143, 618, 624
TaqII GACCGA 1 cut(s) 862
TasI AATT 4 cut(s) 98, 129, 580, 1042
TfiI GAWTC 7 cut(s) 104, 242, 413, 468, 952, 1015, 1075
Tru1I TTAA 1 cut(s) 963
Tru9I TTAA 1 cut(s) 963
TscAI CASTG 4 cut(s) 580, 640, 814, 825
TseFI GTSAC 1 cut(s) 1150
TseI GCWGC 3 cut(s) 181, 508, 1179
Tsp45I GTSAC 1 cut(s) 1150
TspDTI ATGAA 4 cut(s) 76, 433, 573, 1206
TspGWI ACGGA 2 cut(s) 46, 479
TspRI CASTG 4 cut(s) 580, 640, 814, 825
Tth111I GACNNNGTC 1 cut(s) 10
Vha464I CTTAAG 1 cut(s) 962
VneI GTGCAC 1 cut(s) 821
VpaK11BI GGWCC 2 cut(s) 742, 874
XagI CCTNNNNNAGG 1 cut(s) 860
XapI RAATTY 1 cut(s) 98
XcmI CCANNNNNNNNNTGG 1 cut(s) 979
XspI CTAG 1 cut(s) 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.