Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0007220

Physical Location & Seq

Genomic Coordinates Forward (+)

87569944 .. 87607242

Gene Structure 37299 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG649400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGACTGTAAAATACATACATGGACGTCGACTTTTTCATGGGGGTCTGAAGGAAAGGTGCAATTTTGCTATCGTTTCAGGCCAAATCAAAATTATTTGTGTCCGCAGCTTGCGCACTCGGAATGACTTGAAAGATCGTACAAAGTCAAGAGGGAATAACAAGTACAATGAGGATCTTCAAAAAGTAGAGAGTGTGAAGATGAAAGATTTAACAGATCTCAGAGACATGTTACAGGGGGTTATAGTGGAATTCAAGGTTGATTGGGAGGATCAAGATTCATTCTTTCAATTTTTTGACAATAGTCCAGATTTTTGGAATGGCTATGACGGCTTTGTCGATCACCTTATCAAACATCCCTCTCTGTTGAGTTCCGGTAAAAGGATAAAGTACCTTTTTAATTTAGAGCAGGATATAGCAACTAATAAGCTTCGCAAACCTAGTTTATTCATAACAAAATTGGAAGACAACGAGTTTTCTGGGTATTTGAATTGGGATCGTCAACTGAGTCGGGCACCTCGGTTGAGAAATGTCTATCAATACCAGGGCATTAACTACAATAGCGGAAAAGTAAGGGATCTCATCAGATTTCTTGCAAATGCATTTGTGCACTATAGGTCACCGAACCGTAAAAGAGACTTGGACTTTGACATAAGAGGTGTAAGGACTCCAATGGCAGCCATTATATCCTGCCACTCCAAATTCTTAGGACCCAGCATACCCTTTAATGTTGGCACCCGCTTCCCTGTTTCCCGCAACCATTCTTTCCCAACTTCTATTCAATGTCGGATCCAGAACAACAAACAGAAAGGGAGTTCTTTTTCAGTAAAGGAGTGTGCCATTTCAATAGCTTTGACGGTGGGGCTAATAACAGGAGTTCCTGCATTGGAATTGTCCAACAATGCTTATGCAGCTACCCCAGTACTGCCTGATCTGGCTGTACTGATCTCTGGACCGCCAATAAAGGACCCTGGGGCATTGTTGAGATATGCTCTGCCTATTGATAACAAGGCTATCAGGGAGGTACAAAAGCCGCTTGAAGATATCACAGAGAGTCTCAAGATAGCTGGAGTCAAGGCACTAGATTCAACTGAGAGGAATTTGAGGCAGGCGTCTCGAGCACTGAAGCAGGGGAAGCCTTTAATTGTATCTGGATTAGCTGAGTCGAAGAAGGATCATGGTGCTGAATTGCTTGGCAAGCTGGAAGTAGGAATGGATGAGCTCCAACAGATTGTGGAGGATAAAAATAGAGATGGCATTGCTAAGAAACAGAAAGAACTAGTACTCTATGTCGGAGGTGTTGAAGAGGACATGGTGGATGGATTCCCTTATGAAGTGCCCGAAGAATACCAAAGCATGCCTCTATTGAAGGGGAGAGCAACTGTGGATATGAAGGTCAAGGTTAAGGATAATCCTAACCTTACTGACTGTGTCTTTCGTATTGTCCTCGATGGTTACAATGCTCCTGTAACTTCTGGAAACTTTGTGGACTTGGTGGAAAGACACTTTTATGATGGCATGGAAATCCAAAGAGCGGACGGATTTGTTGTACAAACTGGTGATCCTGAAGGACCTGCAGAGGGTTTCATTGATCCAAGTACTGAGAAGACCAGGACAATACCTTTAGAAATCTCTGTAGTTGGAGAGAAAGCACCCTTTTATGGAGCAACTTTGGAAGAACTGGGGCTATACAAGGCTCAGACAAAGCTTCCATTTAACGCATTTGGAACAATGGCAATGGCCCGAGATGAATTTGAGAATAATTCTGCTTCAAGCCAGATATTTTGGTTACTAAAGGAAAGTGAACTAACTCCCAGTAACGCCAATATATTGGATGGTCGGTATGCAGTGTTCGGATACATTACAGAAAATGAGGACTTTTTGGCAGATGTCAAGGTTGGTGATGTTATCGAGTCTATCCAAGTTGTTTCTGGCCTGGAAAATCTAGCGAATCCAAGCTACAAGATTGCTGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006952 GO:0008150 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0016020 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0042651 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0055035 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

657

Amino Acids

73.73

Weight (kDa)

6.56

Isoelectric Point (pI)

37.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CYP38_PsbQ-like	PF21329	322 - 438	1.5e-41	Peptidyl-prolyl cis-trans isomerase CYP38-like, PsbQ-like domain
Pro_isomerase	PF00160	478 - 635	5.5e-21	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007220)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01480 AT3G01480
fragaria_vesca	FvH4_6g50590 FvH4_6g50590
malus_domestica	MD09G1035000.v1.1 MD17G1035100.v1.1
prunus_persica	Prupe.3G283500_v2.0.a1 Prupe.3G283500_v2.0.a1
pyrus_communis	pycom111g02790 pycom17g03240
rosa_chinensis	RchiOBHm_Chr2g0171281 RchiOBHm_Chr2g0171291 RchiOBHm_Chr2g0171361 RchiOBHm_Chr2g0171371 RchiOBHm_Chr2g0171381
rosa_laevigata	RLG00000022008
rosa_multiflora	Rmu_sc0007646.1_g000010
rosa_roxburghii	Rroxscaffold_2G00080710
rosa_rugosa	Rorug02G0553600
rosa_samantha	Rh2AG627900 Rh2BG638400 Rh2CG607100 Rh2DG649400 Rh2DG655500
rosa_wichuraiana	Rw2G052010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	332
AatII	GACGTC	1 cut(s)	28
Acc16I	TGCGCA	1 cut(s)	113
Acc36I	ACCTGC	1 cut(s)	1579
AccB1I	GGYRCC	2 cut(s)	511, 731
AccBSI	CCGCTC	1 cut(s)	1532
AccI	GTMKAC	1 cut(s)	28
AciI	CCGC	7 cut(s)	103, 561, 736, 751, 953, 1031, 1532
AclWI	GGATC	9 cut(s)	180, 276, 501, 582, 781, 794, 1179, 1553, 1583
AcsI	RAATTY	4 cut(s)	248, 698, 1096, 1748
AcuI	CTGAAG	3 cut(s)	68, 1142, 1584
AcyI	GRCGYC	2 cut(s)	25, 1109
AfaI	GTAC	9 cut(s)	139, 164, 389, 921, 939, 1023, 1281, 1548, 1597
AfiI	CCNNNNNNNGG	4 cut(s)	378, 1531, 1577, 1658
AflIII	ACRYGT	1 cut(s)	225
AhlI	ACTAGT	1 cut(s)	1276
AjnI	CCWGG	4 cut(s)	540, 967, 1607, 1932
Alw21I	GWGCWC	3 cut(s)	609, 1120, 1221
Alw26I	GTCTC	4 cut(s)	216, 627, 1058, 1116
Alw44I	GTGCAC	1 cut(s)	605
AlwI	GGATC	9 cut(s)	180, 276, 501, 582, 781, 794, 1179, 1553, 1583
Ama87I	CYCGRG	2 cut(s)	1113, 1740
AoxI	GGCC	3 cut(s)	79, 1737, 1930
ApaLI	GTGCAC	1 cut(s)	605
ApeKI	GCWGC	3 cut(s)	105, 674, 908
ApoI	RAATTY	4 cut(s)	248, 698, 1096, 1748
ArsI	GACNNNNNNTTYG	2 cut(s)	626, 658
AspLEI	GCGC	1 cut(s)	114
AspS9I	GGNCC	5 cut(s)	707, 950, 964, 1568, 1738
AsuHPI	GGTGA	4 cut(s)	332, 609, 1568, 1910
AvaI	CYCGRG	2 cut(s)	1113, 1740
AvaII	GGWCC	4 cut(s)	707, 950, 964, 1568
BaeGI	GKGCMC	3 cut(s)	514, 609, 1338
BamHI	GGATCC	1 cut(s)	786
BanI	GGYRCC	2 cut(s)	511, 731
BanII	GRGCYC	1 cut(s)	1221
BbsI	GAAGAC	2 cut(s)	468, 1610
Bbv12I	GWGCWC	3 cut(s)	609, 1120, 1221
BbvI	GCAGC	3 cut(s)	117, 686, 920
BccI	CCATC	5 cut(s)	1244, 1310, 1442, 1505, 1826
BceAI	ACGGC	1 cut(s)	343
BcgI	CGANNNNNNTGC	2 cut(s)	1094, 1128
BciT130I	CCWGG	4 cut(s)	542, 969, 1609, 1934
BciVI	GTATCC	1 cut(s)	1847
BcoDI	GTCTC	4 cut(s)	216, 627, 1058, 1116
BcuI	ACTAGT	1 cut(s)	1276
BfaI	CTAG	5 cut(s)	438, 1079, 1277, 1943, 1972
BfmI	CTRYAG	3 cut(s)	610, 1572, 1632
BfuAI	ACCTGC	1 cut(s)	1579
BfuI	GTATCC	1 cut(s)	1847
BglII	AGATCT	1 cut(s)	214
BisI	GCNGC	4 cut(s)	106, 675, 909, 1031
BlsI	GCNGC	4 cut(s)	107, 676, 910, 1032
BmcAI	AGTACT	3 cut(s)	921, 1281, 1597
Bme1390I	CCNGG	4 cut(s)	542, 969, 1609, 1934
Bme18I	GGWCC	4 cut(s)	707, 950, 964, 1568
BmeT110I	CYCGRG	2 cut(s)	1113, 1740
BmgT120I	GGNCC	5 cut(s)	707, 950, 964, 1568, 1738
BmiI	GGNNCC	5 cut(s)	513, 709, 733, 788, 966
BmrFI	CCNGG	4 cut(s)	542, 969, 1609, 1934
BmrI	ACTGGG	3 cut(s)	911, 1688, 1806
BmuI	ACTGGG	3 cut(s)	911, 1688, 1806
BoxI	GACNNNNGTC	1 cut(s)	300
BpiI	GAAGAC	2 cut(s)	468, 1610
BplI	GAGNNNNNCTC	2 cut(s)	973, 1005
BpmI	CTGGAG	1 cut(s)	1086
BpuEI	CTTGAG	1 cut(s)	1040
BsaHI	GRCGYC	2 cut(s)	25, 1109
BsaJI	CCNNGG	4 cut(s)	515, 541, 967, 968
BsaWI	WCCGGW	1 cut(s)	371
Bsc4I	CCNNNNNNNGG	4 cut(s)	378, 1531, 1577, 1658
Bse1I	ACTGG	4 cut(s)	917, 1558, 1683, 1812
Bse3DI	GCAATG	2 cut(s)	1254, 1740
BseBI	CCWGG	4 cut(s)	542, 969, 1609, 1934
BseDI	CCNNGG	4 cut(s)	515, 541, 967, 968
BseGI	GGATG	4 cut(s)	352, 1219, 1321, 1837
BseLI	CCNNNNNNNGG	4 cut(s)	378, 1531, 1577, 1658
BseMI	GCAATG	2 cut(s)	1254, 1740
BseMII	CTCAG	6 cut(s)	232, 494, 1080, 1149, 1590, 1709
BseNI	ACTGG	4 cut(s)	917, 1558, 1683, 1812
BseSI	GKGCMC	3 cut(s)	514, 609, 1338
BseXI	GCAGC	3 cut(s)	117, 686, 920
BseYI	CCCAGC	1 cut(s)	710
BshFI	GGCC	3 cut(s)	81, 1739, 1932
BshNI	GGYRCC	2 cut(s)	511, 731
BsiHKAI	GWGCWC	3 cut(s)	609, 1120, 1221
BsiHKCI	CYCGRG	2 cut(s)	1113, 1740
BsiSI	CCGG	1 cut(s)	372
BslI	CCNNNNNNNGG	4 cut(s)	378, 1531, 1577, 1658
BsmAI	GTCTC	4 cut(s)	216, 627, 1058, 1116
BsmBI	CGTCTC	1 cut(s)	1116
BsnI	GGCC	3 cut(s)	81, 1739, 1932
BsoBI	CYCGRG	2 cut(s)	1113, 1740
Bsp1286I	GDGCHC	5 cut(s)	514, 609, 1120, 1221, 1338
Bsp1407I	TGTACA	1 cut(s)	1546
BspACI	CCGC	7 cut(s)	103, 561, 736, 751, 953, 1031, 1532
BspANI	GGCC	3 cut(s)	81, 1739, 1932
BspCNI	CTCAG	6 cut(s)	231, 495, 1081, 1150, 1591, 1708
BspLI	GGNNCC	5 cut(s)	513, 709, 733, 788, 966
BspMAI	CTGCAG	1 cut(s)	1576
BspMI	ACCTGC	1 cut(s)	1579
BspPI	GGATC	9 cut(s)	180, 276, 501, 582, 781, 794, 1179, 1553, 1583
BspT107I	GGYRCC	2 cut(s)	511, 731
BsrBI	CCGCTC	1 cut(s)	1532
BsrDI	GCAATG	2 cut(s)	1254, 1740
BsrGI	TGTACA	1 cut(s)	1546
BsrI	ACTGG	4 cut(s)	917, 1558, 1683, 1812
BssECI	CCNNGG	4 cut(s)	515, 541, 967, 968
BssNI	GRCGYC	2 cut(s)	25, 1109
Bst2UI	CCWGG	4 cut(s)	542, 969, 1609, 1934
Bst4CI	ACNGT	5 cut(s)	7, 626, 856, 1381, 1427
Bst6I	CTCTTC	1 cut(s)	1296
BstACI	GRCGYC	2 cut(s)	25, 1109
BstAUI	TGTACA	1 cut(s)	1546
BstC8I	GCNNGC	5 cut(s)	110, 1107, 1196, 1355, 1969
BstDEI	CTNAG	8 cut(s)	218, 503, 703, 1089, 1158, 1260, 1599, 1695
BstEII	GGTNACC	1 cut(s)	615
BstF5I	GGATG	4 cut(s)	352, 1219, 1321, 1837
BstHHI	GCGC	1 cut(s)	114
BstMAI	GTCTC	4 cut(s)	216, 627, 1058, 1116
BstMWI	GCNNNNNNNGC	6 cut(s)	111, 327, 908, 1115, 1132, 1195
BstNI	CCWGG	4 cut(s)	542, 969, 1609, 1934
BstNSI	RCATGY	2 cut(s)	229, 1357
BstPAI	GACNNNNGTC	1 cut(s)	300
BstPI	GGTNACC	1 cut(s)	615
BstSCI	CCNGG	4 cut(s)	540, 967, 1607, 1932
BstSFI	CTRYAG	3 cut(s)	610, 1572, 1632
BstSLI	GKGCMC	3 cut(s)	514, 609, 1338
BstV1I	GCAGC	3 cut(s)	117, 686, 920
BstV2I	GAAGAC	2 cut(s)	468, 1610
BstX2I	RGATCY	4 cut(s)	172, 214, 574, 786
BstXI	CCANNNNNNTGG	2 cut(s)	312, 1828
BstYI	RGATCY	4 cut(s)	172, 214, 574, 786
BsuI	GTATCC	1 cut(s)	1847
BsuRI	GGCC	3 cut(s)	81, 1739, 1932
BtsCI	GGATG	4 cut(s)	352, 1219, 1321, 1837
BtsI	GCAGTG	1 cut(s)	1851
BtsIMutI	CAGTG	2 cut(s)	1118, 1851
BveI	ACCTGC	1 cut(s)	1579
Cac8I	GCNNGC	5 cut(s)	110, 1107, 1196, 1355, 1969
CfoI	GCGC	1 cut(s)	114
Cfr13I	GGNCC	5 cut(s)	707, 950, 964, 1568, 1738
CseI	GACGC	1 cut(s)	1098
Csp6I	GTAC	9 cut(s)	138, 163, 388, 920, 938, 1022, 1280, 1547, 1596
CviAII	CATG	7 cut(s)	20, 38, 226, 1175, 1309, 1354, 1516
CviQI	GTAC	9 cut(s)	138, 163, 388, 920, 938, 1022, 1280, 1547, 1596
DdeI	CTNAG	8 cut(s)	218, 503, 703, 1089, 1158, 1260, 1599, 1695
DrdI	GACNNNNNNGTC	1 cut(s)	332
DseDI	GACNNNNNNGTC	1 cut(s)	332
Eam1104I	CTCTTC	1 cut(s)	1296
EarI	CTCTTC	1 cut(s)	1296
Ecl136II	GAGCTC	1 cut(s)	1219
Eco24I	GRGCYC	1 cut(s)	1221
Eco32I	GATATC	1 cut(s)	1042
Eco47I	GGWCC	4 cut(s)	707, 950, 964, 1568
Eco53kI	GAGCTC	1 cut(s)	1219
Eco57I	CTGAAG	3 cut(s)	68, 1142, 1584
Eco88I	CYCGRG	2 cut(s)	1113, 1740
Eco91I	GGTNACC	1 cut(s)	615
EcoICRI	GAGCTC	1 cut(s)	1219
EcoO109I	RGGNCCY	3 cut(s)	707, 964, 1568
EcoO65I	GGTNACC	1 cut(s)	615
EcoRI	GAATTC	1 cut(s)	248
EcoRII	CCWGG	4 cut(s)	540, 967, 1607, 1932
EcoRV	GATATC	1 cut(s)	1042
EcoT22I	ATGCAT	1 cut(s)	601
EcoT38I	GRGCYC	1 cut(s)	1221
Esp3I	CGTCTC	1 cut(s)	1116
FaeI	CATG	7 cut(s)	23, 41, 229, 1178, 1312, 1357, 1519
FatI	CATG	7 cut(s)	19, 37, 225, 1174, 1308, 1353, 1515
FauI	CCCGC	2 cut(s)	743, 758
FblI	GTMKAC	1 cut(s)	28
Fnu4HI	GCNGC	4 cut(s)	106, 675, 909, 1031
FokI	GGATG	4 cut(s)	339, 1226, 1328, 1844
FriOI	GRGCYC	1 cut(s)	1221
Fsp4HI	GCNGC	4 cut(s)	106, 675, 909, 1031
FspBI	CTAG	5 cut(s)	438, 1079, 1277, 1943, 1972
FspI	TGCGCA	1 cut(s)	113
GlaI	GCGC	1 cut(s)	113
GluI	GCNGC	4 cut(s)	106, 675, 909, 1031
GsaI	CCCAGC	1 cut(s)	714
GsuI	CTGGAG	1 cut(s)	1086
HaeIII	GGCC	3 cut(s)	81, 1739, 1932
HapII	CCGG	1 cut(s)	372
HgaI	GACGC	1 cut(s)	1098
HhaI	GCGC	1 cut(s)	114
Hin1I	GRCGYC	2 cut(s)	25, 1109
Hin1II	CATG	7 cut(s)	23, 41, 229, 1178, 1312, 1357, 1519
Hin6I	GCGC	1 cut(s)	112
HinP1I	GCGC	1 cut(s)	112
HincII	GTYRAC	2 cut(s)	29, 500
HindII	GTYRAC	2 cut(s)	29, 500
HindIII	AAGCTT	2 cut(s)	425, 1703
HpaII	CCGG	1 cut(s)	372
HphI	GGTGA	4 cut(s)	332, 609, 1568, 1910
Hpy166II	GTNNAC	5 cut(s)	29, 500, 607, 1486, 1802
Hpy188I	TCNGA	8 cut(s)	48, 120, 221, 584, 786, 1292, 1698, 1853
Hpy8I	GTNNAC	5 cut(s)	29, 500, 607, 1486, 1802
Hpy99I	CGWCG	1 cut(s)	30
HpyAV	CCTTC	5 cut(s)	43, 1162, 1360, 1384, 1559
HpyCH4III	ACNGT	5 cut(s)	7, 626, 856, 1381, 1427
HpyCH4IV	ACGT	1 cut(s)	25
HpyCH4V	TGCA	8 cut(s)	60, 593, 599, 607, 881, 908, 1574, 1844
HpyF10VI	GCNNNNNNNGC	6 cut(s)	111, 327, 908, 1115, 1132, 1195
HpyF3I	CTNAG	8 cut(s)	218, 503, 703, 1089, 1158, 1260, 1599, 1695
HpySE526I	ACGT	1 cut(s)	25
Hsp92I	GRCGYC	2 cut(s)	25, 1109
Hsp92II	CATG	7 cut(s)	23, 41, 229, 1178, 1312, 1357, 1519
HspAI	GCGC	1 cut(s)	112
LmnI	GCTCC	3 cut(s)	1224, 1465, 1661
Lsp1109I	GCAGC	3 cut(s)	117, 686, 920
MaeI	CTAG	5 cut(s)	438, 1079, 1277, 1943, 1972
MaeII	ACGT	1 cut(s)	25
MaeIII	GTNAC	6 cut(s)	228, 615, 1451, 1465, 1785, 1814
MbiI	CCGCTC	1 cut(s)	1532
MboII	GAAGA	9 cut(s)	167, 208, 473, 1049, 1177, 1313, 1352, 1615, 1685
MflI	RGATCY	4 cut(s)	172, 214, 574, 786
MhlI	GDGCHC	5 cut(s)	514, 609, 1120, 1221, 1338
MlyI	GAGTC	6 cut(s)	514, 658, 1060, 1077, 1169, 1919
MmeI	TCCRAC	5 cut(s)	764, 918, 1246, 1270, 1618
Mph1103I	ATGCAT	1 cut(s)	601
MseI	TTAA	7 cut(s)	209, 396, 549, 723, 1139, 1401, 1713
MslI	CAYNNNNRTG	1 cut(s)	1506
MspI	CCGG	1 cut(s)	372
MspR9I	CCNGG	4 cut(s)	542, 969, 1609, 1934
MvaI	CCWGG	4 cut(s)	542, 969, 1609, 1934
MwoI	GCNNNNNNNGC	6 cut(s)	111, 327, 908, 1115, 1132, 1195
NlaIII	CATG	7 cut(s)	23, 41, 229, 1178, 1312, 1357, 1519
NlaIV	GGNNCC	5 cut(s)	513, 709, 733, 788, 966
NmuCI	GTSAC	1 cut(s)	615
NsbI	TGCGCA	1 cut(s)	113
NsiI	ATGCAT	1 cut(s)	601
NspI	RCATGY	2 cut(s)	229, 1357
PaeI	GCATGC	1 cut(s)	1357
PaeR7I	CTCGAG	1 cut(s)	1113
PasI	CCCWGGG	1 cut(s)	968
PciI	ACATGT	1 cut(s)	225
PcsI	WCGNNNNNNNCGW	1 cut(s)	333
PfeI	GAWTC	4 cut(s)	275, 1082, 1320, 1948
PflFI	GACNNNGTC	1 cut(s)	1427
PkrI	GCNGC	4 cut(s)	107, 676, 910, 1032
PleI	GAGTC	6 cut(s)	513, 658, 1059, 1076, 1168, 1918
PpsI	GAGTC	6 cut(s)	513, 658, 1059, 1076, 1168, 1918
PpuMI	RGGWCCY	3 cut(s)	707, 964, 1568
PscI	ACATGT	1 cut(s)	225
PshAI	GACNNNNGTC	1 cut(s)	300
Psp124BI	GAGCTC	1 cut(s)	1221
Psp5II	RGGWCCY	3 cut(s)	707, 964, 1568
Psp6I	CCWGG	4 cut(s)	540, 967, 1607, 1932
PspEI	GGTNACC	1 cut(s)	615
PspFI	CCCAGC	1 cut(s)	710
PspGI	CCWGG	4 cut(s)	540, 967, 1607, 1932
PspN4I	GGNNCC	5 cut(s)	513, 709, 733, 788, 966
PspPI	GGNCC	5 cut(s)	707, 950, 964, 1568, 1738
PspPPI	RGGWCCY	3 cut(s)	707, 964, 1568
PsrI	GAACNNNNNNTAC	2 cut(s)	1832, 1864
PstI	CTGCAG	1 cut(s)	1576
PsuI	RGATCY	4 cut(s)	172, 214, 574, 786
PsyI	GACNNNGTC	1 cut(s)	1427
RsaI	GTAC	9 cut(s)	139, 164, 389, 921, 939, 1023, 1281, 1548, 1597
RsaNI	GTAC	9 cut(s)	138, 163, 388, 920, 938, 1022, 1280, 1547, 1596
RseI	CAYNNNNRTG	1 cut(s)	1506
SacI	GAGCTC	1 cut(s)	1221
SalI	GTCGAC	1 cut(s)	27
SaqAI	TTAA	7 cut(s)	209, 396, 549, 723, 1139, 1401, 1713
SatI	GCNGC	4 cut(s)	106, 675, 909, 1031
Sau96I	GGNCC	5 cut(s)	707, 950, 964, 1568, 1738
ScaI	AGTACT	3 cut(s)	921, 1281, 1597
SchI	GAGTC	6 cut(s)	514, 658, 1060, 1077, 1169, 1919
ScrFI	CCNGG	4 cut(s)	542, 969, 1609, 1934
SduI	GDGCHC	5 cut(s)	514, 609, 1120, 1221, 1338
SfcI	CTRYAG	3 cut(s)	610, 1572, 1632
Sfr274I	CTCGAG	1 cut(s)	1113
SinI	GGWCC	4 cut(s)	707, 950, 964, 1568
SlaI	CTCGAG	1 cut(s)	1113
SmiMI	CAYNNNNRTG	1 cut(s)	1506
SmlI	CTYRAG	2 cut(s)	1055, 1113
SmoI	CTYRAG	2 cut(s)	1055, 1113
SpeI	ACTAGT	1 cut(s)	1276
SphI	GCATGC	1 cut(s)	1357
SsiI	CCGC	7 cut(s)	103, 561, 736, 751, 953, 1031, 1532
SspMI	CTAG	5 cut(s)	438, 1079, 1277, 1943, 1972
SstI	GAGCTC	1 cut(s)	1221
StyD4I	CCNGG	4 cut(s)	540, 967, 1607, 1932
TaaI	ACNGT	5 cut(s)	7, 626, 856, 1381, 1427
TaiI	ACGT	1 cut(s)	28
TaqI	TCGA	6 cut(s)	28, 336, 1114, 1163, 1446, 1908
TatI	WGTACW	6 cut(s)	162, 919, 937, 1279, 1546, 1595
TauI	GCSGC	1 cut(s)	1033
TfiI	GAWTC	4 cut(s)	275, 1082, 1320, 1948
Tru1I	TTAA	7 cut(s)	209, 396, 549, 723, 1139, 1401, 1713
Tru9I	TTAA	7 cut(s)	209, 396, 549, 723, 1139, 1401, 1713
TscAI	CASTG	2 cut(s)	1125, 1851
TseFI	GTSAC	1 cut(s)	615
TseI	GCWGC	3 cut(s)	105, 674, 908
Tsp45I	GTSAC	1 cut(s)	615
TspDTI	ATGAA	8 cut(s)	26, 215, 267, 436, 1344, 1403, 1573, 1761
TspGWI	ACGGA	1 cut(s)	1551
TspRI	CASTG	2 cut(s)	1125, 1851
Tth111I	GACNNNGTC	1 cut(s)	1427
VneI	GTGCAC	1 cut(s)	605
VpaK11BI	GGWCC	4 cut(s)	707, 950, 964, 1568
XapI	RAATTY	4 cut(s)	248, 698, 1096, 1748
XceI	RCATGY	2 cut(s)	229, 1357
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1925
XhoI	CTCGAG	1 cut(s)	1113
XmiI	GTMKAC	1 cut(s)	28
XspI	CTAG	5 cut(s)	438, 1079, 1277, 1943, 1972
ZraI	GACGTC	1 cut(s)	26
ZrmI	AGTACT	3 cut(s)	921, 1281, 1597
Zsp2I	ATGCAT	1 cut(s)	601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.