zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g25690 FvH4_6g35210 |
| malus_domestica | MD09G1177700.v1.1 |
| prunus_persica | Prupe.3G037000_v2.0.a1 |
| pyrus_communis | pycom09g09610 |
| rosa_chinensis | RchiOBHm_Chr2g0146551 |
| rosa_laevigata | RLG00000003520 RLG00000015540 RLG00000020205 |
| rosa_multiflora | Rmu_sc0000654.1_g000028 Rmu_sc0001986.1_g000025 Rmu_sc0005157.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00100050 Rroxscaffold_7G00217240 |
| rosa_rugosa | Rorug02G0394700 |
| rosa_samantha | Rh2AG451500 Rh2BG464300 Rh2CG438400 Rh2DG473300 Rh2DG658700 Rh6CG004000 |
| rosa_wichuraiana | Rw2G036880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 171 |
| AciI | CCGC | 5 cut(s) | 119, 165, 169, 171, 174 |
| AclI | AACGTT | 1 cut(s) | 186 |
| AcoI | YGGCCR | 1 cut(s) | 166 |
| AgsI | TTSAA | 2 cut(s) | 8, 89 |
| AluBI | AGCT | 2 cut(s) | 34, 82 |
| AluI | AGCT | 2 cut(s) | 34, 82 |
| AoxI | GGCC | 1 cut(s) | 166 |
| ApeKI | GCWGC | 1 cut(s) | 162 |
| BbvI | GCAGC | 1 cut(s) | 174 |
| BfaI | CTAG | 1 cut(s) | 114 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 174 |
| BisI | GCNGC | 6 cut(s) | 120, 163, 166, 169, 172, 175 |
| BlsI | GCNGC | 6 cut(s) | 121, 164, 167, 170, 173, 176 |
| BpuEI | CTTGAG | 1 cut(s) | 61 |
| BsaJI | CCNNGG | 1 cut(s) | 169 |
| Bse1I | ACTGG | 2 cut(s) | 70, 204 |
| BseDI | CCNNGG | 1 cut(s) | 169 |
| BseNI | ACTGG | 2 cut(s) | 70, 204 |
| BseRI | GAGGAG | 1 cut(s) | 58 |
| BseX3I | CGGCCG | 1 cut(s) | 166 |
| BseXI | GCAGC | 1 cut(s) | 174 |
| Bsh1236I | CGCG | 1 cut(s) | 171 |
| Bsh1285I | CGRYCG | 1 cut(s) | 169 |
| BshFI | GGCC | 1 cut(s) | 168 |
| BsiEI | CGRYCG | 1 cut(s) | 169 |
| BsnI | GGCC | 1 cut(s) | 168 |
| BspACI | CCGC | 5 cut(s) | 119, 165, 169, 171, 174 |
| BspANI | GGCC | 1 cut(s) | 168 |
| BspFNI | CGCG | 1 cut(s) | 171 |
| BsrI | ACTGG | 2 cut(s) | 70, 204 |
| BssECI | CCNNGG | 1 cut(s) | 169 |
| BstC8I | GCNNGC | 1 cut(s) | 194 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstDSI | CCRYGG | 1 cut(s) | 169 |
| BstFNI | CGCG | 1 cut(s) | 171 |
| BstMCI | CGRYCG | 1 cut(s) | 169 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 31, 168, 171, 174 |
| BstUI | CGCG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 1 cut(s) | 174 |
| BstZI | CGGCCG | 1 cut(s) | 166 |
| BsuRI | GGCC | 1 cut(s) | 168 |
| BtgI | CCRYGG | 1 cut(s) | 169 |
| BtsI | GCAGTG | 1 cut(s) | 122 |
| BtsIMutI | CAGTG | 1 cut(s) | 122 |
| Cac8I | GCNNGC | 1 cut(s) | 194 |
| CciNI | GCGGCCGC | 1 cut(s) | 166 |
| Cfr42I | CCGCGG | 1 cut(s) | 172 |
| CviJI | RGCY | 4 cut(s) | 34, 82, 168, 177 |
| CviKI_1 | RGCY | 4 cut(s) | 34, 82, 168, 177 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| EaeI | YGGCCR | 1 cut(s) | 166 |
| EagI | CGGCCG | 1 cut(s) | 166 |
| EclXI | CGGCCG | 1 cut(s) | 166 |
| Eco52I | CGGCCG | 1 cut(s) | 166 |
| FaiI | YATR | 1 cut(s) | 74 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 23, 55 |
| Fnu4HI | GCNGC | 6 cut(s) | 120, 163, 166, 169, 172, 175 |
| Fsp4HI | GCNGC | 6 cut(s) | 120, 163, 166, 169, 172, 175 |
| FspBI | CTAG | 1 cut(s) | 114 |
| GluI | GCNGC | 6 cut(s) | 120, 163, 166, 169, 172, 175 |
| HaeIII | GGCC | 1 cut(s) | 168 |
| HincII | GTYRAC | 1 cut(s) | 184 |
| HindII | GTYRAC | 1 cut(s) | 184 |
| HinfI | GANTC | 1 cut(s) | 110 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188I | TCNGA | 1 cut(s) | 59 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyAV | CCTTC | 1 cut(s) | 135 |
| HpyCH4IV | ACGT | 2 cut(s) | 180, 186 |
| HpyCH4V | TGCA | 2 cut(s) | 127, 150 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 31, 168, 171, 174 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| HpySE526I | ACGT | 2 cut(s) | 180, 186 |
| KspI | CCGCGG | 1 cut(s) | 172 |
| LmnI | GCTCC | 2 cut(s) | 22, 100 |
| LpnPI | CCDG | 3 cut(s) | 51, 167, 185 |
| Lsp1109I | GCAGC | 1 cut(s) | 174 |
| MaeI | CTAG | 1 cut(s) | 114 |
| MaeII | ACGT | 2 cut(s) | 180, 186 |
| MmeI | TCCRAC | 1 cut(s) | 118 |
| MnlI | CCTC | 1 cut(s) | 36 |
| MseI | TTAA | 1 cut(s) | 96 |
| MspA1I | CMGCKG | 2 cut(s) | 165, 171 |
| MvnI | CGCG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 31, 168, 171, 174 |
| NotI | GCGGCCGC | 1 cut(s) | 166 |
| PfeI | GAWTC | 1 cut(s) | 110 |
| PkrI | GCNGC | 6 cut(s) | 121, 164, 167, 170, 173, 176 |
| Psp1406I | AACGTT | 1 cut(s) | 186 |
| SacII | CCGCGG | 1 cut(s) | 172 |
| SaqAI | TTAA | 1 cut(s) | 96 |
| SatI | GCNGC | 6 cut(s) | 120, 163, 166, 169, 172, 175 |
| SetI | ASST | 5 cut(s) | 36, 84, 146, 183, 189 |
| Sfr303I | CCGCGG | 1 cut(s) | 172 |
| SgeI | CNNG | 7 cut(s) | 52, 78, 91, 126, 166, 182, 205 |
| SgrBI | CCGCGG | 1 cut(s) | 172 |
| SmlI | CTYRAG | 1 cut(s) | 40 |
| SmoI | CTYRAG | 1 cut(s) | 40 |
| SsiI | CCGC | 5 cut(s) | 119, 165, 169, 171, 174 |
| SspMI | CTAG | 1 cut(s) | 114 |
| TaiI | ACGT | 2 cut(s) | 183, 189 |
| TauI | GCSGC | 5 cut(s) | 122, 168, 171, 174, 177 |
| TfiI | GAWTC | 1 cut(s) | 110 |
| Tru1I | TTAA | 1 cut(s) | 96 |
| Tru9I | TTAA | 1 cut(s) | 96 |
| TscAI | CASTG | 1 cut(s) | 129 |
| TseI | GCWGC | 1 cut(s) | 162 |
| TspRI | CASTG | 1 cut(s) | 129 |
| XspI | CTAG | 1 cut(s) | 114 |