Ring finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05250 AT3G05250 AT3G05250 |
| fragaria_vesca | FvH4_6g05630 |
| malus_domestica | MD04G1207100.v1.1 MD12G1221000.v1.1 MD12G1221200.v1.1 |
| prunus_persica | Prupe.6G327800_v2.0.a1 Prupe.6G327800_v2.0.a1 Prupe.6G327800_v2.0.a1 |
| pyrus_communis | pycom04g18310 |
| rosa_chinensis | RchiOBHm_Chr3g0454381 |
| rosa_laevigata | RLG00000025446 RLG00000025448 |
| rosa_multiflora | Rmu_sc0000006.1_g000002 Rmu_sc0000006.1_g000019 Rmu_sc0007209.1_g000011 |
| rosa_roxburghii | Rroxscaffold_6G00425150 |
| rosa_rugosa | Rorug02G0654500 |
| rosa_samantha | Rh3AG058600 Rh3BG060500 |
| rosa_wichuraiana | Rw3G004530 Rw3G004560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 86 |
| AcuI | CTGAAG | 3 cut(s) | 90, 159, 231 |
| AfeI | AGCGCT | 1 cut(s) | 218 |
| AgsI | TTSAA | 2 cut(s) | 92, 191 |
| Alw21I | GWGCWC | 1 cut(s) | 235 |
| Alw26I | GTCTC | 2 cut(s) | 89, 106 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 254 |
| Aor51HI | AGCGCT | 1 cut(s) | 218 |
| AoxI | GGCC | 1 cut(s) | 116 |
| ApeKI | GCWGC | 4 cut(s) | 110, 214, 254, 257 |
| ApoI | RAATTY | 1 cut(s) | 86 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 165, 244 |
| AspLEI | GCGC | 1 cut(s) | 219 |
| Bbv12I | GWGCWC | 1 cut(s) | 235 |
| BbvI | GCAGC | 4 cut(s) | 122, 226, 241, 244 |
| BcoDI | GTCTC | 2 cut(s) | 89, 106 |
| BfmI | CTRYAG | 1 cut(s) | 258 |
| BfoI | RGCGCY | 1 cut(s) | 220 |
| BisI | GCNGC | 4 cut(s) | 111, 215, 255, 258 |
| BlsI | GCNGC | 4 cut(s) | 112, 216, 256, 259 |
| BmsI | GCATC | 1 cut(s) | 190 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 86, 118 |
| Bpu10I | CCTNAGC | 1 cut(s) | 220 |
| BseXI | GCAGC | 4 cut(s) | 122, 226, 241, 244 |
| BshFI | GGCC | 1 cut(s) | 118 |
| BsiHKAI | GWGCWC | 1 cut(s) | 235 |
| BsmAI | GTCTC | 2 cut(s) | 89, 106 |
| BsnI | GGCC | 1 cut(s) | 118 |
| Bsp1286I | GDGCHC | 1 cut(s) | 235 |
| BspANI | GGCC | 1 cut(s) | 118 |
| BspMAI | CTGCAG | 1 cut(s) | 262 |
| Bst4CI | ACNGT | 1 cut(s) | 100 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 200 |
| BstC8I | GCNNGC | 1 cut(s) | 212 |
| BstDEI | CTNAG | 2 cut(s) | 124, 220 |
| BstH2I | RGCGCY | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 219 |
| BstMAI | GTCTC | 2 cut(s) | 89, 106 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 200, 216 |
| BstNSI | RCATGY | 1 cut(s) | 214 |
| BstSFI | CTRYAG | 1 cut(s) | 258 |
| BstV1I | GCAGC | 4 cut(s) | 122, 226, 241, 244 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 14 |
| BsuRI | GGCC | 1 cut(s) | 118 |
| BtsI | GCAGTG | 1 cut(s) | 334 |
| BtsIMutI | CAGTG | 1 cut(s) | 334 |
| Cac8I | GCNNGC | 1 cut(s) | 212 |
| CaiI | CAGNNNCTG | 1 cut(s) | 254 |
| CfoI | GCGC | 1 cut(s) | 219 |
| CviAII | CATG | 1 cut(s) | 211 |
| CviJI | RGCY | 3 cut(s) | 118, 128, 254 |
| CviKI_1 | RGCY | 3 cut(s) | 118, 128, 254 |
| DdeI | CTNAG | 2 cut(s) | 124, 220 |
| DraI | TTTAAA | 1 cut(s) | 183 |
| Eco147I | AGGCCT | 1 cut(s) | 118 |
| Eco47III | AGCGCT | 1 cut(s) | 218 |
| Eco57I | CTGAAG | 3 cut(s) | 90, 159, 231 |
| FaeI | CATG | 1 cut(s) | 214 |
| FaiI | YATR | 6 cut(s) | 11, 42, 196, 212, 282, 306 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 255, 287 |
| FatI | CATG | 1 cut(s) | 210 |
| Fnu4HI | GCNGC | 4 cut(s) | 111, 215, 255, 258 |
| Fsp4HI | GCNGC | 4 cut(s) | 111, 215, 255, 258 |
| GlaI | GCGC | 1 cut(s) | 218 |
| GluI | GCNGC | 4 cut(s) | 111, 215, 255, 258 |
| HaeII | RGCGCY | 1 cut(s) | 220 |
| HaeIII | GGCC | 1 cut(s) | 118 |
| HhaI | GCGC | 1 cut(s) | 219 |
| Hin1II | CATG | 1 cut(s) | 214 |
| Hin6I | GCGC | 1 cut(s) | 217 |
| HinP1I | GCGC | 1 cut(s) | 217 |
| HinfI | GANTC | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 3 cut(s) | 57, 70, 250 |
| Hpy188III | TCNNGA | 1 cut(s) | 92 |
| HpyAV | CCTTC | 1 cut(s) | 257 |
| HpyCH4III | ACNGT | 1 cut(s) | 100 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 110, 210, 214, 260, 304 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 200, 216 |
| HpyF3I | CTNAG | 2 cut(s) | 124, 220 |
| Hsp92II | CATG | 1 cut(s) | 214 |
| HspAI | GCGC | 1 cut(s) | 217 |
| LpnPI | CCDG | 2 cut(s) | 162, 300 |
| Lsp1109I | GCAGC | 4 cut(s) | 122, 226, 241, 244 |
| LweI | GCATC | 1 cut(s) | 190 |
| MhlI | GDGCHC | 1 cut(s) | 235 |
| MluCI | AATT | 1 cut(s) | 86 |
| MlyI | GAGTC | 1 cut(s) | 46 |
| MmeI | TCCRAC | 1 cut(s) | 206 |
| MnlI | CCTC | 2 cut(s) | 148, 244 |
| MroXI | GAANNNNTTC | 2 cut(s) | 165, 244 |
| MseI | TTAA | 2 cut(s) | 24, 182 |
| MssI | GTTTAAAC | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 200, 216 |
| NlaIII | CATG | 1 cut(s) | 214 |
| NmeAIII | GCCGAG | 1 cut(s) | 301 |
| NspI | RCATGY | 1 cut(s) | 214 |
| PaeI | GCATGC | 1 cut(s) | 214 |
| PceI | AGGCCT | 1 cut(s) | 118 |
| PdmI | GAANNNNTTC | 2 cut(s) | 165, 244 |
| PkrI | GCNGC | 4 cut(s) | 112, 216, 256, 259 |
| PleI | GAGTC | 1 cut(s) | 45 |
| PmeI | GTTTAAAC | 1 cut(s) | 183 |
| PpsI | GAGTC | 1 cut(s) | 45 |
| PstI | CTGCAG | 1 cut(s) | 262 |
| PstNI | CAGNNNCTG | 1 cut(s) | 254 |
| SaqAI | TTAA | 2 cut(s) | 24, 182 |
| SatI | GCNGC | 4 cut(s) | 111, 215, 255, 258 |
| SchI | GAGTC | 1 cut(s) | 46 |
| SduI | GDGCHC | 1 cut(s) | 235 |
| SetI | ASST | 5 cut(s) | 55, 159, 181, 226, 289 |
| SfaNI | GCATC | 1 cut(s) | 190 |
| SfcI | CTRYAG | 1 cut(s) | 258 |
| SphI | GCATGC | 1 cut(s) | 214 |
| Sse9I | AATT | 1 cut(s) | 86 |
| SseBI | AGGCCT | 1 cut(s) | 118 |
| StuI | AGGCCT | 1 cut(s) | 118 |
| TaaI | ACNGT | 1 cut(s) | 100 |
| TaqII | GACCGA | 1 cut(s) | 156 |
| TasI | AATT | 1 cut(s) | 86 |
| Tru1I | TTAA | 2 cut(s) | 24, 182 |
| Tru9I | TTAA | 2 cut(s) | 24, 182 |
| TscAI | CASTG | 1 cut(s) | 334 |
| TseI | GCWGC | 4 cut(s) | 110, 214, 254, 257 |
| TspGWI | ACGGA | 1 cut(s) | 252 |
| TspRI | CASTG | 1 cut(s) | 334 |
| XapI | RAATTY | 1 cut(s) | 86 |
| XceI | RCATGY | 1 cut(s) | 214 |
| XmnI | GAANNNNTTC | 2 cut(s) | 165, 244 |