Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0003428

Physical Location & Seq

Genomic Coordinates Forward (+)

16152594 .. 16159994

Gene Structure 7401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG183600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGTCAATAAGTAAATTAAGAGCTGCTTTACTATCTGTAATGTATATATTTGAGTTGATGCTATGCTGTCGCAGATTTGTATGGAGAAAGAAGATTGAGCGTGATGTCTCCCACGGCGTGCCACTCGACGTGTATTCAGTTAAAGCTGAGAAGCAAAGACAGAGAGACAGGATGGCTGAGATAGAAAAGGTTAAGAAGAGAAGGGAGGAAAGAGCACTTGAAAAAGCTCAACATGAGGAAGAAATGGCGCTGCTTGCCAGAGAACGCGCTCGGGCTGAGTTCCAAGACTGGGAGAAAAAAGAAGAAGAGTTCCACTTTGATCAAAGCAAAATGAGGTCAGAGATCAGATTGCGTGAAGGGCGTATCAAGCCAATTGATGTACTTTCCAAGCATCTTGATGGCTCAGATGATTTAGATATTGAGATAAATGAGCCATACATGGTTTTCAAGGGCTTGACGGTAAAGGAAATGGAAGAGCTTCGAGATGACATTAAAATGCATCTTGATTTAGACAGGGCAACTCCTACACATATAGAATACTGGGAGGCACTTTTGGTGGTTTGCGATTGGGAGCTATCTGAAGCTCGGAAAAAGGATGCTTTGGATCGAGCTAGGGTTCGTGGGGAGGAACCTCCTGCCGAGTTACTTGCTGAACAAAGAGGCATGCATTCTAGCATTGAAGCAGATGTCAAGAATCTCTTGGAAGGGAAGACTTACAGTCAGTTGGAGGCATTACAGTCTGAAATTGAGTCACAGATGCGTTCTGGTACAGCCAAGGTCGTTGAGTATTGGGAGGCTGTTCTTACACGCCTCCATATATTCAAGGCCAAGGCCTGTTTGAAAGAAATCCATGCTAAAATGTTGCACAAGCATCTGCAGCGCCTTGAGGGACGAGAGGATGGTGAAGAGAAATTGGATATGCCCGATGACTTGCAACCTGAAGAGGAGAGTGAGCCTGATGCTAATGGTGCTGAAACATATTCACCAGAACCCATAGAGGAGGAGATCCACATGGCTGAAGAAGAGGCTGAAGAGGCCGGTTCATTTTCACCTGAACTATTACATGGAGATGAAAATGAGGAAGTGATGGACCCTGAAGAGGATAGGGCTATACTGGAACGCAAGCGCATGGCCGTATTAGAAGAACAACAAAGACGAATTCAAGAGGCTATGGCATCAAAGCCAGCTCCACCATCAGAAGATAACTTTGAGATGAAGGCTGCCATGAAAGCCATGGGTGCCATGGAGGAAGGTGATGCAATATTTGGCTCTGGTTCTGAAGTGAACCTTGACTCACAGGTTTACTGGTGGCACGACAAGTACCGACCTAGAAAGCCGAAATATTTCAACCGTGTTCACACAGGATATGAATGGAACAAGTACAATCAGACCCACTATGATCACGATAACCCACCTCCAAAGATTGTGCAAGGATATAAATTCAACATCTTCTATCCAGACCTTGTTGACAAGATAAAGGCTCCAACTTATACTATTGAGAAGGATGGAAGCAGCAGCGAGACCTGCATTATAAGGTTTCATGCAGGGCCACCTTACGAAGACATTGCATTCCGTATAGTGAACAAAGAATGGGAATACTCTCACAAGAAGGGGTTTAAATGCACATTCGAGCGTGGAATTTTGCACGTATACTTTAACTTCAAACGATACCGGTACCGCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CactinC_cactus Cactin_mid

Protein Analysis

561

Amino Acids

66.11

Weight (kDa)

5.38

Isoelectric Point (pI)

64.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cactin_mid	PF10312	87 - 284	2.2e-62	Conserved mid region of cactin
CactinC_cactus	PF09732	437 - 561	2.9e-63	Cactus-binding C-terminus of cactin protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03910 AT1G03910 AT2G36815 AT2G36815
fragaria_vesca	FvH4_6g17312 FvH4_6g17312 FvH4_6g17312 FvH4_6g17312 FvH4_6g17312
malus_domestica	MD12G1102100.v1.1 MD14G1096200.v1.1
prunus_persica	Prupe.7G122300_v2.0.a1
pyrus_communis	pycom14g09420
rosa_chinensis	RchiOBHm_Chr3g0471451 RchiOBHm_Chr3g0471601
rosa_laevigata	RLG00000024153 RLG00000024161 RLG00000024177
rosa_multiflora	Rmu_sc0006582.1_g000009 Rmu_sc0008048.1_g000005 Rmu_sc0037090.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409750 Rroxscaffold_6G00409940
rosa_rugosa	Rorug03G0117800 Rorug03G0118500
rosa_samantha	Rh3AG167700 Rh3AG169100 Rh3AG169200 Rh3BG193200 Rh3BG194800 Rh3CG183600 Rh3CG185500 Rh3DG180000 Rh3DG182300
rosa_wichuraiana	Rw3G015800 Rw3G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1532
AarI	CACCTGC	1 cut(s)	1671
Acc36I	ACCTGC	2 cut(s)	1532, 1671
Acc65I	GGTACC	1 cut(s)	1674
AccB1I	GGYRCC	2 cut(s)	1238, 1674
AccI	GTMKAC	1 cut(s)	1650
AccII	CGCG	1 cut(s)	267
AciI	CCGC	1 cut(s)	1678
AclWI	GGATC	2 cut(s)	612, 1000
AcoI	YGGCCR	1 cut(s)	1131
AcsI	RAATTY	3 cut(s)	1158, 1439, 1638
AcuI	CTGAAG	6 cut(s)	600, 960, 1038, 1050, 1116, 1299
AdeI	CACNNNGTG	1 cut(s)	118
AfaI	GTAC	5 cut(s)	381, 769, 1322, 1382, 1676
AfiI	CCNNNNNNNGG	2 cut(s)	289, 1099
AflIII	ACRYGT	1 cut(s)	129
AgeI	ACCGGT	1 cut(s)	1671
AgsI	TTSAA	9 cut(s)	221, 448, 680, 823, 841, 1163, 1348, 1444, 1663
AhdI	GACNNNNNGTC	1 cut(s)	717
AjiI	CACGTC	1 cut(s)	130
AluBI	AGCT	8 cut(s)	23, 146, 227, 478, 574, 584, 611, 1187
AluI	AGCT	8 cut(s)	23, 146, 227, 478, 574, 584, 611, 1187
Alw21I	GWGCWC	1 cut(s)	217
Alw26I	GTCTC	3 cut(s)	112, 159, 1514
AlwI	GGATC	2 cut(s)	612, 1000
Ama87I	CYCGRG	1 cut(s)	270
AoxI	GGCC	5 cut(s)	825, 831, 1035, 1131, 1547
ApeKI	GCWGC	6 cut(s)	23, 250, 877, 1220, 1512, 1515
ApoI	RAATTY	3 cut(s)	1158, 1439, 1638
AsiGI	ACCGGT	1 cut(s)	1671
Asp700I	GAANNNNTTC	2 cut(s)	477, 1343
Asp718I	GGTACC	1 cut(s)	1674
AspLEI	GCGC	4 cut(s)	250, 269, 882, 1128
AspS9I	GGNCC	2 cut(s)	1090, 1547
AsuHPI	GGTGA	4 cut(s)	914, 975, 1041, 1265
AvaI	CYCGRG	1 cut(s)	270
AvaII	GGWCC	1 cut(s)	1090
BanI	GGYRCC	2 cut(s)	1238, 1674
BbsI	GAAGAC	2 cut(s)	716, 1566
Bbv12I	GWGCWC	1 cut(s)	217
BbvI	GCAGC	6 cut(s)	10, 237, 889, 1207, 1524, 1527
BccI	CCATC	6 cut(s)	166, 392, 893, 1081, 1201, 1499
BceAI	ACGGC	2 cut(s)	130, 1118
BcgI	CGANNNNNNTGC	4 cut(s)	629, 663, 1547, 1581
BclI	TGATCA	2 cut(s)	319, 1399
BcoDI	GTCTC	3 cut(s)	112, 159, 1514
BfaI	CTAG	3 cut(s)	612, 672, 1329
BfmI	CTRYAG	1 cut(s)	875
BfoI	RGCGCY	2 cut(s)	251, 883
BfuAI	ACCTGC	2 cut(s)	1532, 1671
BisI	GCNGC	6 cut(s)	24, 251, 878, 1221, 1513, 1516
BlsI	GCNGC	6 cut(s)	25, 252, 879, 1222, 1514, 1517
Bme18I	GGWCC	1 cut(s)	1090
BmeRI	GACNNNNNGTC	1 cut(s)	717
BmeT110I	CYCGRG	1 cut(s)	270
BmgBI	CACGTC	1 cut(s)	130
BmgT120I	GGNCC	2 cut(s)	1090, 1547
BmiI	GGNNCC	5 cut(s)	630, 1092, 1240, 1482, 1676
BmrI	ACTGGG	2 cut(s)	298, 550
BmsI	GCATC	9 cut(s)	48, 400, 508, 586, 747, 880, 949, 1184, 1246
BmuI	ACTGGG	2 cut(s)	298, 550
BpiI	GAAGAC	2 cut(s)	716, 1566
BpuEI	CTTGAG	1 cut(s)	905
BsaAI	YACGTR	1 cut(s)	1648
BsaI	GGTCTC	1 cut(s)	1514
BsaJI	CCNNGG	5 cut(s)	112, 774, 828, 1233, 1242
BsaWI	WCCGGW	1 cut(s)	1671
Bsc4I	CCNNNNNNNGG	2 cut(s)	289, 1099
Bse118I	RCCGGY	2 cut(s)	1037, 1671
Bse1I	ACTGG	4 cut(s)	293, 545, 1119, 1310
Bse3DI	GCAATG	1 cut(s)	1563
BseDI	CCNNGG	5 cut(s)	112, 774, 828, 1233, 1242
BseGI	GGATG	4 cut(s)	177, 601, 904, 1510
BseLI	CCNNNNNNNGG	2 cut(s)	289, 1099
BseMI	GCAATG	1 cut(s)	1563
BseMII	CTCAG	4 cut(s)	138, 168, 267, 417
BseNI	ACTGG	4 cut(s)	293, 545, 1119, 1310
BseRI	GAGGAG	3 cut(s)	959, 1013, 1016
BseXI	GCAGC	6 cut(s)	10, 237, 889, 1207, 1524, 1527
Bsh1236I	CGCG	1 cut(s)	267
BshFI	GGCC	5 cut(s)	827, 833, 1037, 1133, 1549
BshNI	GGYRCC	2 cut(s)	1238, 1674
BshTI	ACCGGT	1 cut(s)	1671
BsiHKAI	GWGCWC	1 cut(s)	217
BsiHKCI	CYCGRG	1 cut(s)	270
BsiSI	CCGG	2 cut(s)	1038, 1672
BslFI	GGGAC	1 cut(s)	903
BslI	CCNNNNNNNGG	2 cut(s)	289, 1099
BsmAI	GTCTC	3 cut(s)	112, 159, 1514
BsmFI	GGGAC	1 cut(s)	903
BsmI	GAATGC	2 cut(s)	667, 1568
BsnI	GGCC	5 cut(s)	827, 833, 1037, 1133, 1549
Bso31I	GGTCTC	1 cut(s)	1514
BsoBI	CYCGRG	1 cut(s)	270
Bsp1286I	GDGCHC	1 cut(s)	217
Bsp143I	GATC	5 cut(s)	319, 342, 604, 1005, 1399
Bsp19I	CCATGG	2 cut(s)	1233, 1242
BspACI	CCGC	1 cut(s)	1678
BspANI	GGCC	5 cut(s)	827, 833, 1037, 1133, 1549
BspCNI	CTCAG	4 cut(s)	139, 169, 268, 416
BspFNI	CGCG	1 cut(s)	267
BspLI	GGNNCC	5 cut(s)	630, 1092, 1240, 1482, 1676
BspMAI	CTGCAG	1 cut(s)	879
BspMI	ACCTGC	2 cut(s)	1532, 1671
BspPI	GGATC	2 cut(s)	612, 1000
BspQI	GCTCTTC	1 cut(s)	468
BspT107I	GGYRCC	2 cut(s)	1238, 1674
BspTNI	GGTCTC	1 cut(s)	1514
BsrDI	GCAATG	1 cut(s)	1563
BsrFI	RCCGGY	2 cut(s)	1037, 1671
BsrI	ACTGG	4 cut(s)	293, 545, 1119, 1310
BssAI	RCCGGY	2 cut(s)	1037, 1671
BssECI	CCNNGG	5 cut(s)	112, 774, 828, 1233, 1242
BssMI	GATC	5 cut(s)	319, 342, 604, 1005, 1399
BssNAI	GTATAC	1 cut(s)	1651
BssT1I	CCWWGG	4 cut(s)	774, 828, 1233, 1242
Bst1107I	GTATAC	1 cut(s)	1651
Bst4CI	ACNGT	4 cut(s)	460, 719, 738, 1352
Bst6I	CTCTTC	8 cut(s)	191, 300, 468, 900, 936, 1017, 1026, 1092
BstBAI	YACGTR	1 cut(s)	1648
BstC8I	GCNNGC	5 cut(s)	119, 255, 665, 1124, 1185
BstDEI	CTNAG	4 cut(s)	147, 177, 276, 403
BstDSI	CCRYGG	3 cut(s)	112, 1233, 1242
BstF5I	GGATG	4 cut(s)	177, 601, 904, 1510
BstFNI	CGCG	1 cut(s)	267
BstH2I	RGCGCY	2 cut(s)	251, 883
BstHHI	GCGC	4 cut(s)	250, 269, 882, 1128
BstKTI	GATC	5 cut(s)	322, 345, 607, 1008, 1402
BstMAI	GTCTC	3 cut(s)	112, 159, 1514
BstMBI	GATC	5 cut(s)	319, 342, 604, 1005, 1399
BstMWI	GCNNNNNNNGC	9 cut(s)	254, 358, 367, 877, 968, 1034, 1229, 1238, 1524
BstNSI	RCATGY	1 cut(s)	667
BstSFI	CTRYAG	1 cut(s)	875
BstUI	CGCG	1 cut(s)	267
BstV1I	GCAGC	6 cut(s)	10, 237, 889, 1207, 1524, 1527
BstV2I	GAAGAC	2 cut(s)	716, 1566
BstX2I	RGATCY	1 cut(s)	1005
BstYI	RGATCY	1 cut(s)	1005
BstZ17I	GTATAC	1 cut(s)	1651
BsuRI	GGCC	5 cut(s)	827, 833, 1037, 1133, 1549
BtgI	CCRYGG	3 cut(s)	112, 1233, 1242
BtrI	CACGTC	1 cut(s)	130
BtsCI	GGATG	4 cut(s)	177, 601, 904, 1510
BveI	ACCTGC	2 cut(s)	1532, 1671
Cac8I	GCNNGC	5 cut(s)	119, 255, 665, 1124, 1185
CfoI	GCGC	4 cut(s)	250, 269, 882, 1128
Cfr10I	RCCGGY	2 cut(s)	1037, 1671
Cfr13I	GGNCC	2 cut(s)	1090, 1547
Csp6I	GTAC	5 cut(s)	380, 768, 1321, 1381, 1675
CspAI	ACCGGT	1 cut(s)	1671
CviQI	GTAC	5 cut(s)	380, 768, 1321, 1381, 1675
DdeI	CTNAG	4 cut(s)	147, 177, 276, 403
DpnI	GATC	5 cut(s)	321, 344, 606, 1007, 1401
DpnII	GATC	5 cut(s)	319, 342, 604, 1005, 1399
DraI	TTTAAA	1 cut(s)	1618
DraIII	CACNNNGTG	1 cut(s)	118
DriI	GACNNNNNGTC	1 cut(s)	717
EaeI	YGGCCR	1 cut(s)	1131
Eam1104I	CTCTTC	8 cut(s)	191, 300, 468, 900, 936, 1017, 1026, 1092
Eam1105I	GACNNNNNGTC	1 cut(s)	717
EarI	CTCTTC	8 cut(s)	191, 300, 468, 900, 936, 1017, 1026, 1092
Eco130I	CCWWGG	4 cut(s)	774, 828, 1233, 1242
Eco147I	AGGCCT	1 cut(s)	833
Eco31I	GGTCTC	1 cut(s)	1514
Eco47I	GGWCC	1 cut(s)	1090
Eco57I	CTGAAG	6 cut(s)	600, 960, 1038, 1050, 1116, 1299
Eco88I	CYCGRG	1 cut(s)	270
EcoRI	GAATTC	1 cut(s)	1158
EcoT14I	CCWWGG	4 cut(s)	774, 828, 1233, 1242
EcoT22I	ATGCAT	2 cut(s)	501, 669
ErhI	CCWWGG	4 cut(s)	774, 828, 1233, 1242
FalI	AAGNNNNNCTT	6 cut(s)	10, 42, 683, 715, 1272, 1304
FaqI	GGGAC	1 cut(s)	903
FbaI	TGATCA	2 cut(s)	319, 1399
FblI	GTMKAC	1 cut(s)	1650
Fnu4HI	GCNGC	6 cut(s)	24, 251, 878, 1221, 1513, 1516
FokI	GGATG	4 cut(s)	184, 608, 911, 1517
Fsp4HI	GCNGC	6 cut(s)	24, 251, 878, 1221, 1513, 1516
FspBI	CTAG	3 cut(s)	612, 672, 1329
GlaI	GCGC	4 cut(s)	249, 268, 881, 1127
GluI	GCNGC	6 cut(s)	24, 251, 878, 1221, 1513, 1516
HaeII	RGCGCY	2 cut(s)	251, 883
HaeIII	GGCC	5 cut(s)	827, 833, 1037, 1133, 1549
HapII	CCGG	2 cut(s)	1038, 1672
HhaI	GCGC	4 cut(s)	250, 269, 882, 1128
Hin6I	GCGC	4 cut(s)	248, 267, 880, 1126
HinP1I	GCGC	4 cut(s)	248, 267, 880, 1126
HincII	GTYRAC	1 cut(s)	1468
HindII	GTYRAC	1 cut(s)	1468
HinfI	GANTC	3 cut(s)	694, 749, 1292
HpaII	CCGG	2 cut(s)	1038, 1672
HphI	GGTGA	4 cut(s)	914, 975, 1041, 1265
Hpy166II	GTNNAC	6 cut(s)	1285, 1303, 1357, 1468, 1582, 1651
Hpy188I	TCNGA	9 cut(s)	340, 347, 406, 580, 588, 742, 1198, 1279, 1389
Hpy188III	TCNNGA	7 cut(s)	395, 482, 503, 691, 1163, 1403, 1457
Hpy8I	GTNNAC	6 cut(s)	1285, 1303, 1357, 1468, 1582, 1651
Hpy99I	CGWCG	1 cut(s)	131
HpyAV	CCTTC	7 cut(s)	195, 350, 698, 1210, 1244, 1495, 1603
HpyCH4III	ACNGT	4 cut(s)	460, 719, 738, 1352
HpyCH4IV	ACGT	2 cut(s)	129, 1647
HpyF10VI	GCNNNNNNNGC	9 cut(s)	254, 358, 367, 877, 968, 1034, 1229, 1238, 1524
HpyF3I	CTNAG	4 cut(s)	147, 177, 276, 403
HpySE526I	ACGT	2 cut(s)	129, 1647
HspAI	GCGC	4 cut(s)	248, 267, 880, 1126
KpnI	GGTACC	1 cut(s)	1678
Ksp22I	TGATCA	2 cut(s)	319, 1399
Kzo9I	GATC	5 cut(s)	319, 342, 604, 1005, 1399
LguI	GCTCTTC	1 cut(s)	468
LmnI	GCTCC	3 cut(s)	571, 1192, 1486
Lsp1109I	GCAGC	6 cut(s)	10, 237, 889, 1207, 1524, 1527
LweI	GCATC	9 cut(s)	48, 400, 508, 586, 747, 880, 949, 1184, 1246
MaeI	CTAG	3 cut(s)	612, 672, 1329
MaeII	ACGT	2 cut(s)	129, 1647
MaeIII	GTNAC	2 cut(s)	642, 750
MalI	GATC	5 cut(s)	321, 344, 606, 1007, 1401
MboI	GATC	5 cut(s)	319, 342, 604, 1005, 1399
MfeI	CAATTG	1 cut(s)	372
MflI	RGATCY	1 cut(s)	1005
MhlI	GDGCHC	1 cut(s)	217
MluCI	AATT	7 cut(s)	14, 372, 744, 911, 1158, 1439, 1638
MlyI	GAGTC	2 cut(s)	758, 1286
MmeI	TCCRAC	2 cut(s)	705, 1508
Mph1103I	ATGCAT	2 cut(s)	501, 669
MroXI	GAANNNNTTC	2 cut(s)	477, 1343
MseI	TTAA	6 cut(s)	17, 141, 192, 492, 1617, 1656
MslI	CAYNNNNRTG	3 cut(s)	396, 494, 1068
MspI	CCGG	2 cut(s)	1038, 1672
MunI	CAATTG	1 cut(s)	372
Mva1269I	GAATGC	2 cut(s)	667, 1568
MvnI	CGCG	1 cut(s)	267
MwoI	GCNNNNNNNGC	9 cut(s)	254, 358, 367, 877, 968, 1034, 1229, 1238, 1524
NcoI	CCATGG	2 cut(s)	1233, 1242
NdeII	GATC	5 cut(s)	319, 342, 604, 1005, 1399
NlaIV	GGNNCC	5 cut(s)	630, 1092, 1240, 1482, 1676
NmeAIII	GCCGAG	1 cut(s)	664
NmuCI	GTSAC	1 cut(s)	750
NsiI	ATGCAT	2 cut(s)	501, 669
NspI	RCATGY	1 cut(s)	667
PaeI	GCATGC	1 cut(s)	667
PaqCI	CACCTGC	1 cut(s)	1671
PceI	AGGCCT	1 cut(s)	833
PciSI	GCTCTTC	1 cut(s)	468
PctI	GAATGC	2 cut(s)	667, 1568
PdmI	GAANNNNTTC	2 cut(s)	477, 1343
PfeI	GAWTC	1 cut(s)	694
PinAI	ACCGGT	1 cut(s)	1671
PkrI	GCNGC	6 cut(s)	25, 252, 879, 1222, 1514, 1517
PleI	GAGTC	2 cut(s)	757, 1286
PpsI	GAGTC	2 cut(s)	757, 1286
Ppu21I	YACGTR	1 cut(s)	1648
PsiI	TTATAA	1 cut(s)	1532
PspN4I	GGNNCC	5 cut(s)	630, 1092, 1240, 1482, 1676
PspPI	GGNCC	2 cut(s)	1090, 1547
PstI	CTGCAG	1 cut(s)	879
PsuI	RGATCY	1 cut(s)	1005
RsaI	GTAC	5 cut(s)	381, 769, 1322, 1382, 1676
RsaNI	GTAC	5 cut(s)	380, 768, 1321, 1381, 1675
RseI	CAYNNNNRTG	3 cut(s)	396, 494, 1068
SapI	GCTCTTC	1 cut(s)	468
SaqAI	TTAA	6 cut(s)	17, 141, 192, 492, 1617, 1656
SatI	GCNGC	6 cut(s)	24, 251, 878, 1221, 1513, 1516
Sau3AI	GATC	5 cut(s)	319, 342, 604, 1005, 1399
Sau96I	GGNCC	2 cut(s)	1090, 1547
SchI	GAGTC	2 cut(s)	758, 1286
SduI	GDGCHC	1 cut(s)	217
SfaNI	GCATC	9 cut(s)	48, 400, 508, 586, 747, 880, 949, 1184, 1246
SfcI	CTRYAG	1 cut(s)	875
SinI	GGWCC	1 cut(s)	1090
SmiMI	CAYNNNNRTG	3 cut(s)	396, 494, 1068
SmlI	CTYRAG	1 cut(s)	884
SmoI	CTYRAG	1 cut(s)	884
SphI	GCATGC	1 cut(s)	667
Sse9I	AATT	7 cut(s)	14, 372, 744, 911, 1158, 1439, 1638
SseBI	AGGCCT	1 cut(s)	833
SsiI	CCGC	1 cut(s)	1678
SspI	AATATT	2 cut(s)	1263, 1343
SspMI	CTAG	3 cut(s)	612, 672, 1329
StuI	AGGCCT	1 cut(s)	833
StyI	CCWWGG	4 cut(s)	774, 828, 1233, 1242
TaaI	ACNGT	4 cut(s)	460, 719, 738, 1352
TaiI	ACGT	2 cut(s)	132, 1650
TaqI	TCGA	4 cut(s)	126, 481, 607, 1629
TasI	AATT	7 cut(s)	14, 372, 744, 911, 1158, 1439, 1638
TatI	WGTACW	2 cut(s)	379, 1380
TfiI	GAWTC	1 cut(s)	694
Tru1I	TTAA	6 cut(s)	17, 141, 192, 492, 1617, 1656
Tru9I	TTAA	6 cut(s)	17, 141, 192, 492, 1617, 1656
TseFI	GTSAC	1 cut(s)	750
TseI	GCWGC	6 cut(s)	23, 250, 877, 1220, 1512, 1515
Tsp45I	GTSAC	1 cut(s)	750
TspDTI	ATGAA	6 cut(s)	1032, 1086, 1229, 1241, 1383, 1529
TspGWI	ACGGA	1 cut(s)	1562
VpaK11BI	GGWCC	1 cut(s)	1090
XapI	RAATTY	3 cut(s)	1158, 1439, 1638
XceI	RCATGY	1 cut(s)	667
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1231, 1240
XmiI	GTMKAC	1 cut(s)	1650
XmnI	GAANNNNTTC	2 cut(s)	477, 1343
XspI	CTAG	3 cut(s)	612, 672, 1329
Zsp2I	ATGCAT	2 cut(s)	501, 669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.