Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0003428

Physical Location & Seq

Genomic Coordinates Reverse (-)

16169644 .. 16176498

Gene Structure 6855 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG182300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGGACGCAGCAGCAGGAGTAGGAAGGAGGCCTCATCCGGTCGACGCAGACGAAAGTCCGACGACTCCGACTCCGACTCCGATTCGTACACCGACTCCGACGATTCCGACAGCCTCGACTCCTCTCCGTCGAGGAGTTCCGCCAAGCGCAAGGAGCGAAGCAGTCGCAGCAGAAAGAGCAGCAGCCGCCGCCGGAACCACTCCGACGACGAGTCGTATGAAAGCGACGACAGCGACGAGCCCGACCGCAAGAAGAAGAGGTCGTCGAGGAACGTCACCGAGGAGCAAATCGCCGAGTACTTGGCTAAGAAGGCACAGAAAAAGGCGGCTCGAGTAGCTAAGAAGCTGAAATCGAAGACGGTTTCGGGTTATTCCAATGATTCCAATCCCTTCGGTGATTCCAATCTCAATGAGACATTTGTATGGAGAAAGAAGATTGAGCGTGATGTCTCCCACGGCGTGCCACTCGATGTGTATTCAGTTAAAGCTGAGAAGCAAAGACAGAGAGACAGGATGGCTGAGATAGAAAAGGTTAAGAAGAGAAGGGAGGAAAGAGCACTTGAAAAAGCTCAACATGAGGAAGAAATGGCGCTGCTTGCCAGAGAACGCGCTCGGGCTGAGTTCCAAGACTGGGAGAAAAAAGAAGAAGAGTTCCACTTTGATCAAAGCAAAATGAGGTCAGAGATCAGATTGCGTGAAGGGCGTATCAAGCCAATTGATGTACTTTCCAAGCATCTTGATGGCTCAGATGATTTAGATATTGAGATAAATGAGCCATACATGGTTTTCAAGGGCTTGACGGTAAAGGAAATGGAAGAGCTTCGAGATGACATTAAAATGCATCTTGATTTAGACAGGGCAACTCCTACACATATAGAATACTGGGAGGCACTTTTGGTGGTTTGCGATTGGGAGCTATCTGAAGCTCGGAAAAAGGATGCTTTGGATCGAGCTAGGGTTCGTGGGGAGGAACCTCCTGCCGAGTTACTTGCTGAACAAAGAGGCATGCATTCTAGCATTGAAGCAGATGTCAAGAATCTCTTGGAAGGGAAGACTTACAGTCAGTTGGAGGCATTACAGTCTGAAATTGAGTCACAGATGCGTTCTGGTACAGCCAAGGTCGTTGAGTATTGGGAGGCTGTTCTTACACGCCTCCATATATTCAAGGCCAAGGCCTGTTTGAAAGAAATCCATGCTAAAATGTTGCACAAGCATCTGCAGCGCCTTGAGGGACGAGAGGATGGTGAAGAGAAATTGGATATGCCCGATGACTTGCAACCTGAAGAGGAGAGTGAGCCTGATGCTAATGGTGCTGAAACATATTCACCAGAACCCATAGAGGAGGAGATCCACATGGCTGAAGAAGAGGCTGAAGAGGCCGGTTCATTTTCACCTGAACTATTACATGGAGATGAAAATGAGGAAGTGATGGACCCTGAAGAGGATAGGGCTATACTGGAACGCAAGCGCATGGCCGTATTAGAAGAACAACAAAGACGAATTCAAGAGGCTATGGCATCAAAGCCAGCTCCACCATCAGAAGATAACTTTGAGATGAAGGCTGCCATGAAAGCCATGGGTGCCATGGAGGAAGGTGATGCAATATTTGGCTCTGGTTCTGAAGTGAACCTTGACTCACAAGTTTACTGGTGGCACGACAAGTACCGACCTAGAAAGCCGAAATATTTCAACCGTGTTCACACAGGATATGAATGGAATAAGTACAATCAGACCCACTATGATCACGATAACCCACCTCCAAAGATTGTGCAAGGATATAAATTCAACATCTTCTATCCAGACCTTGTTGACAAGATAAAGGCTCCAACTTATACTATTGAGAAGGATGGAAGCAGCAGCGAGACCTGCATTATAAGGTTTCATGCAGGGCCACCTTACGAAGACATTGCATTCCGTATAGTGAACAAAGAATGGGAATACTCTCACAAGAAGGGGTTTAAATGCACATTCGAGCGTGGAATTTTGCACGTATACTTTAACTTCAAACGATACCGGTACCGCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CactinC_cactus Cactin_mid

Protein Analysis

675

Amino Acids

78.85

Weight (kDa)

5.64

Isoelectric Point (pI)

72.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cactin_mid	PF10312	201 - 398	3.2e-62	Conserved mid region of cactin
CactinC_cactus	PF09732	551 - 675	3.9e-63	Cactus-binding C-terminus of cactin protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03910 AT1G03910 AT2G36815 AT2G36815
fragaria_vesca	FvH4_6g17312 FvH4_6g17312 FvH4_6g17312 FvH4_6g17312 FvH4_6g17312
malus_domestica	MD12G1102100.v1.1 MD14G1096200.v1.1
prunus_persica	Prupe.7G122300_v2.0.a1
pyrus_communis	pycom14g09420
rosa_chinensis	RchiOBHm_Chr3g0471451 RchiOBHm_Chr3g0471601
rosa_laevigata	RLG00000024153 RLG00000024161 RLG00000024177
rosa_multiflora	Rmu_sc0006582.1_g000009 Rmu_sc0008048.1_g000005 Rmu_sc0037090.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409750 Rroxscaffold_6G00409940
rosa_rugosa	Rorug03G0117800 Rorug03G0118500
rosa_samantha	Rh3AG167700 Rh3AG169100 Rh3AG169200 Rh3BG193200 Rh3BG194800 Rh3CG183600 Rh3CG185500 Rh3DG180000 Rh3DG182300
rosa_wichuraiana	Rw3G015800 Rw3G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1874
AarI	CACCTGC	1 cut(s)	2013
Acc36I	ACCTGC	2 cut(s)	1874, 2013
Acc65I	GGTACC	1 cut(s)	2016
AccB1I	GGYRCC	2 cut(s)	1580, 2016
AccI	GTMKAC	2 cut(s)	43, 1992
AccII	CGCG	1 cut(s)	609
AciI	CCGC	6 cut(s)	141, 187, 190, 247, 326, 2020
AclWI	GGATC	2 cut(s)	954, 1342
AcoI	YGGCCR	1 cut(s)	1473
AcsI	RAATTY	3 cut(s)	1500, 1781, 1980
AcuI	CTGAAG	6 cut(s)	942, 1302, 1380, 1392, 1458, 1641
AdeI	CACNNNGTG	1 cut(s)	460
AfaI	GTAC	7 cut(s)	89, 299, 723, 1111, 1664, 1724, 2018
AfiI	CCNNNNNNNGG	2 cut(s)	631, 1441
AgeI	ACCGGT	1 cut(s)	2013
AgsI	TTSAA	9 cut(s)	563, 790, 1022, 1165, 1183, 1505, 1690, 1786, 2005
AhdI	GACNNNNNGTC	2 cut(s)	211, 1059
AluBI	AGCT	9 cut(s)	338, 346, 488, 569, 820, 916, 926, 953, 1529
AluI	AGCT	9 cut(s)	338, 346, 488, 569, 820, 916, 926, 953, 1529
Alw21I	GWGCWC	1 cut(s)	559
Alw26I	GTCTC	4 cut(s)	407, 454, 501, 1856
AlwI	GGATC	2 cut(s)	954, 1342
Ama87I	CYCGRG	2 cut(s)	330, 612
AoxI	GGCC	6 cut(s)	30, 1167, 1173, 1377, 1473, 1889
ApoI	RAATTY	3 cut(s)	1500, 1781, 1980
AsiGI	ACCGGT	1 cut(s)	2013
Asp700I	GAANNNNTTC	2 cut(s)	819, 1685
Asp718I	GGTACC	1 cut(s)	2016
AspLEI	GCGC	5 cut(s)	150, 592, 611, 1224, 1470
AspS9I	GGNCC	2 cut(s)	1432, 1889
AsuHPI	GGTGA	6 cut(s)	268, 407, 1256, 1317, 1383, 1607
AvaI	CYCGRG	2 cut(s)	330, 612
AvaII	GGWCC	1 cut(s)	1432
BanI	GGYRCC	2 cut(s)	1580, 2016
BanII	GRGCYC	1 cut(s)	243
BbsI	GAAGAC	3 cut(s)	362, 1058, 1908
Bbv12I	GWGCWC	1 cut(s)	559
BccI	CCATC	6 cut(s)	508, 734, 1235, 1423, 1543, 1841
BceAI	ACGGC	2 cut(s)	472, 1460
BcgI	CGANNNNNNTGC	4 cut(s)	971, 1005, 1889, 1923
BclI	TGATCA	2 cut(s)	661, 1741
BcoDI	GTCTC	4 cut(s)	407, 454, 501, 1856
BfaI	CTAG	3 cut(s)	954, 1014, 1671
BfmI	CTRYAG	1 cut(s)	1217
BfoI	RGCGCY	2 cut(s)	593, 1225
BfuAI	ACCTGC	2 cut(s)	1874, 2013
BmcAI	AGTACT	1 cut(s)	299
Bme18I	GGWCC	1 cut(s)	1432
BmeRI	GACNNNNNGTC	2 cut(s)	211, 1059
BmeT110I	CYCGRG	2 cut(s)	330, 612
BmgT120I	GGNCC	2 cut(s)	1432, 1889
BmiI	GGNNCC	6 cut(s)	197, 972, 1434, 1582, 1824, 2018
BmrI	ACTGGG	2 cut(s)	640, 892
BmsI	GCATC	8 cut(s)	742, 850, 928, 1089, 1222, 1291, 1526, 1588
BmuI	ACTGGG	2 cut(s)	640, 892
BoxI	GACNNNNGTC	1 cut(s)	55
BpiI	GAAGAC	3 cut(s)	362, 1058, 1908
BpuEI	CTTGAG	1 cut(s)	1247
BsaAI	YACGTR	1 cut(s)	1990
BsaBI	GATNNNNATC	2 cut(s)	384, 402
BsaI	GGTCTC	1 cut(s)	1856
BsaJI	CCNNGG	6 cut(s)	279, 454, 1116, 1170, 1575, 1584
BsaWI	WCCGGW	2 cut(s)	38, 2013
BsaXI	ACNNNNNCTCC	6 cut(s)	56, 62, 80, 86, 92, 110
Bsc4I	CCNNNNNNNGG	2 cut(s)	631, 1441
Bse118I	RCCGGY	2 cut(s)	1379, 2013
Bse1I	ACTGG	4 cut(s)	635, 887, 1461, 1652
Bse3DI	GCAATG	1 cut(s)	1905
Bse8I	GATNNNNATC	2 cut(s)	384, 402
BseDI	CCNNGG	6 cut(s)	279, 454, 1116, 1170, 1575, 1584
BseGI	GGATG	5 cut(s)	35, 519, 943, 1246, 1852
BseJI	GATNNNNATC	2 cut(s)	384, 402
BseLI	CCNNNNNNNGG	2 cut(s)	631, 1441
BseMI	GCAATG	1 cut(s)	1905
BseMII	CTCAG	4 cut(s)	480, 510, 609, 759
BseNI	ACTGG	4 cut(s)	635, 887, 1461, 1652
BseRI	GAGGAG	6 cut(s)	112, 148, 296, 1301, 1355, 1358
Bsh1236I	CGCG	1 cut(s)	609
Bsh1285I	CGRYCG	2 cut(s)	43, 247
BshFI	GGCC	6 cut(s)	32, 1169, 1175, 1379, 1475, 1891
BshNI	GGYRCC	2 cut(s)	1580, 2016
BshTI	ACCGGT	1 cut(s)	2013
BsiEI	CGRYCG	2 cut(s)	43, 247
BsiHKAI	GWGCWC	1 cut(s)	559
BsiHKCI	CYCGRG	2 cut(s)	330, 612
BsiSI	CCGG	4 cut(s)	39, 193, 1380, 2014
BslFI	GGGAC	2 cut(s)	18, 1245
BslI	CCNNNNNNNGG	2 cut(s)	631, 1441
BsmAI	GTCTC	4 cut(s)	407, 454, 501, 1856
BsmFI	GGGAC	2 cut(s)	18, 1245
BsmI	GAATGC	2 cut(s)	1009, 1910
BsnI	GGCC	6 cut(s)	32, 1169, 1175, 1379, 1475, 1891
Bso31I	GGTCTC	1 cut(s)	1856
BsoBI	CYCGRG	2 cut(s)	330, 612
Bsp1286I	GDGCHC	2 cut(s)	243, 559
Bsp143I	GATC	5 cut(s)	661, 684, 946, 1347, 1741
Bsp19I	CCATGG	2 cut(s)	1575, 1584
BspACI	CCGC	6 cut(s)	141, 187, 190, 247, 326, 2020
BspANI	GGCC	6 cut(s)	32, 1169, 1175, 1379, 1475, 1891
BspCNI	CTCAG	4 cut(s)	481, 511, 610, 758
BspFNI	CGCG	1 cut(s)	609
BspLI	GGNNCC	6 cut(s)	197, 972, 1434, 1582, 1824, 2018
BspMAI	CTGCAG	1 cut(s)	1221
BspMI	ACCTGC	2 cut(s)	1874, 2013
BspPI	GGATC	2 cut(s)	954, 1342
BspQI	GCTCTTC	1 cut(s)	810
BspT107I	GGYRCC	2 cut(s)	1580, 2016
BspTNI	GGTCTC	1 cut(s)	1856
BsrDI	GCAATG	1 cut(s)	1905
BsrFI	RCCGGY	2 cut(s)	1379, 2013
BsrI	ACTGG	4 cut(s)	635, 887, 1461, 1652
BssAI	RCCGGY	2 cut(s)	1379, 2013
BssECI	CCNNGG	6 cut(s)	279, 454, 1116, 1170, 1575, 1584
BssMI	GATC	5 cut(s)	661, 684, 946, 1347, 1741
BssNAI	GTATAC	1 cut(s)	1993
BssT1I	CCWWGG	4 cut(s)	1116, 1170, 1575, 1584
Bst1107I	GTATAC	1 cut(s)	1993
Bst4CI	ACNGT	5 cut(s)	361, 802, 1061, 1080, 1694
Bst6I	CTCTTC	9 cut(s)	251, 533, 642, 810, 1242, 1278, 1359, 1368, 1434
BstBAI	YACGTR	1 cut(s)	1990
BstC8I	GCNNGC	5 cut(s)	461, 597, 1007, 1466, 1527
BstDEI	CTNAG	6 cut(s)	306, 339, 489, 519, 618, 745
BstDSI	CCRYGG	3 cut(s)	454, 1575, 1584
BstF5I	GGATG	5 cut(s)	35, 519, 943, 1246, 1852
BstFNI	CGCG	1 cut(s)	609
BstH2I	RGCGCY	2 cut(s)	593, 1225
BstHHI	GCGC	5 cut(s)	150, 592, 611, 1224, 1470
BstKTI	GATC	5 cut(s)	664, 687, 949, 1350, 1744
BstMAI	GTCTC	4 cut(s)	407, 454, 501, 1856
BstMBI	GATC	5 cut(s)	661, 684, 946, 1347, 1741
BstMCI	CGRYCG	2 cut(s)	43, 247
BstNSI	RCATGY	1 cut(s)	1009
BstPAI	GACNNNNGTC	1 cut(s)	55
BstSFI	CTRYAG	1 cut(s)	1217
BstUI	CGCG	1 cut(s)	609
BstV2I	GAAGAC	3 cut(s)	362, 1058, 1908
BstX2I	RGATCY	1 cut(s)	1347
BstYI	RGATCY	1 cut(s)	1347
BstZ17I	GTATAC	1 cut(s)	1993
BsuRI	GGCC	6 cut(s)	32, 1169, 1175, 1379, 1475, 1891
BtgI	CCRYGG	3 cut(s)	454, 1575, 1584
BtsCI	GGATG	5 cut(s)	35, 519, 943, 1246, 1852
BveI	ACCTGC	2 cut(s)	1874, 2013
Cac8I	GCNNGC	5 cut(s)	461, 597, 1007, 1466, 1527
CfoI	GCGC	5 cut(s)	150, 592, 611, 1224, 1470
Cfr10I	RCCGGY	2 cut(s)	1379, 2013
Cfr13I	GGNCC	2 cut(s)	1432, 1889
CseI	GACGC	2 cut(s)	15, 54
Csp6I	GTAC	7 cut(s)	88, 298, 722, 1110, 1663, 1723, 2017
CspAI	ACCGGT	1 cut(s)	2013
CviQI	GTAC	7 cut(s)	88, 298, 722, 1110, 1663, 1723, 2017
DdeI	CTNAG	6 cut(s)	306, 339, 489, 519, 618, 745
DpnI	GATC	5 cut(s)	663, 686, 948, 1349, 1743
DpnII	GATC	5 cut(s)	661, 684, 946, 1347, 1741
DraI	TTTAAA	1 cut(s)	1960
DraIII	CACNNNGTG	1 cut(s)	460
DriI	GACNNNNNGTC	2 cut(s)	211, 1059
EaeI	YGGCCR	1 cut(s)	1473
Eam1104I	CTCTTC	9 cut(s)	251, 533, 642, 810, 1242, 1278, 1359, 1368, 1434
Eam1105I	GACNNNNNGTC	2 cut(s)	211, 1059
EarI	CTCTTC	9 cut(s)	251, 533, 642, 810, 1242, 1278, 1359, 1368, 1434
EciI	GGCGGA	1 cut(s)	130
Eco130I	CCWWGG	4 cut(s)	1116, 1170, 1575, 1584
Eco147I	AGGCCT	2 cut(s)	32, 1175
Eco24I	GRGCYC	1 cut(s)	243
Eco31I	GGTCTC	1 cut(s)	1856
Eco47I	GGWCC	1 cut(s)	1432
Eco57I	CTGAAG	6 cut(s)	942, 1302, 1380, 1392, 1458, 1641
Eco88I	CYCGRG	2 cut(s)	330, 612
EcoRI	GAATTC	1 cut(s)	1500
EcoT14I	CCWWGG	4 cut(s)	1116, 1170, 1575, 1584
EcoT22I	ATGCAT	2 cut(s)	843, 1011
EcoT38I	GRGCYC	1 cut(s)	243
ErhI	CCWWGG	4 cut(s)	1116, 1170, 1575, 1584
FalI	AAGNNNNNCTT	4 cut(s)	1025, 1057, 1614, 1646
FaqI	GGGAC	2 cut(s)	18, 1245
FbaI	TGATCA	2 cut(s)	661, 1741
FblI	GTMKAC	2 cut(s)	43, 1992
FokI	GGATG	5 cut(s)	22, 526, 950, 1253, 1859
FriOI	GRGCYC	1 cut(s)	243
FspBI	CTAG	3 cut(s)	954, 1014, 1671
GlaI	GCGC	5 cut(s)	149, 591, 610, 1223, 1469
HaeII	RGCGCY	2 cut(s)	593, 1225
HaeIII	GGCC	6 cut(s)	32, 1169, 1175, 1379, 1475, 1891
HapII	CCGG	4 cut(s)	39, 193, 1380, 2014
HgaI	GACGC	2 cut(s)	15, 54
HhaI	GCGC	5 cut(s)	150, 592, 611, 1224, 1470
Hin6I	GCGC	5 cut(s)	148, 590, 609, 1222, 1468
HinP1I	GCGC	5 cut(s)	148, 590, 609, 1222, 1468
HincII	GTYRAC	2 cut(s)	44, 1810
HindII	GTYRAC	2 cut(s)	44, 1810
HpaII	CCGG	4 cut(s)	39, 193, 1380, 2014
HphI	GGTGA	6 cut(s)	268, 407, 1256, 1317, 1383, 1607
Hpy166II	GTNNAC	8 cut(s)	44, 90, 1627, 1645, 1699, 1810, 1924, 1993
Hpy188III	TCNNGA	7 cut(s)	737, 824, 845, 1033, 1505, 1745, 1799
Hpy8I	GTNNAC	8 cut(s)	44, 90, 1627, 1645, 1699, 1810, 1924, 1993
Hpy99I	CGWCG	9 cut(s)	48, 65, 104, 133, 209, 212, 230, 239, 268
HpyCH4III	ACNGT	5 cut(s)	361, 802, 1061, 1080, 1694
HpyCH4IV	ACGT	2 cut(s)	273, 1989
HpyF3I	CTNAG	6 cut(s)	306, 339, 489, 519, 618, 745
HpySE526I	ACGT	2 cut(s)	273, 1989
HspAI	GCGC	5 cut(s)	148, 590, 609, 1222, 1468
KpnI	GGTACC	1 cut(s)	2020
Ksp22I	TGATCA	2 cut(s)	661, 1741
Kzo9I	GATC	5 cut(s)	661, 684, 946, 1347, 1741
LguI	GCTCTTC	1 cut(s)	810
LmnI	GCTCC	5 cut(s)	154, 283, 913, 1534, 1828
LweI	GCATC	8 cut(s)	742, 850, 928, 1089, 1222, 1291, 1526, 1588
MaeI	CTAG	3 cut(s)	954, 1014, 1671
MaeII	ACGT	2 cut(s)	273, 1989
MaeIII	GTNAC	3 cut(s)	274, 984, 1092
MalI	GATC	5 cut(s)	663, 686, 948, 1349, 1743
MboI	GATC	5 cut(s)	661, 684, 946, 1347, 1741
MfeI	CAATTG	1 cut(s)	714
MflI	RGATCY	1 cut(s)	1347
MhlI	GDGCHC	2 cut(s)	243, 559
MluCI	AATT	6 cut(s)	714, 1086, 1253, 1500, 1781, 1980
MlyI	GAGTC	8 cut(s)	59, 65, 71, 89, 113, 221, 1100, 1628
MmeI	TCCRAC	8 cut(s)	84, 93, 99, 123, 132, 228, 1047, 1850
Mph1103I	ATGCAT	2 cut(s)	843, 1011
MroXI	GAANNNNTTC	2 cut(s)	819, 1685
MseI	TTAA	5 cut(s)	483, 534, 834, 1959, 1998
MslI	CAYNNNNRTG	4 cut(s)	421, 738, 836, 1410
MspI	CCGG	4 cut(s)	39, 193, 1380, 2014
MunI	CAATTG	1 cut(s)	714
Mva1269I	GAATGC	2 cut(s)	1009, 1910
MvnI	CGCG	1 cut(s)	609
NcoI	CCATGG	2 cut(s)	1575, 1584
NdeII	GATC	5 cut(s)	661, 684, 946, 1347, 1741
NlaIV	GGNNCC	6 cut(s)	197, 972, 1434, 1582, 1824, 2018
NmeAIII	GCCGAG	2 cut(s)	319, 1006
NmuCI	GTSAC	2 cut(s)	274, 1092
NsiI	ATGCAT	2 cut(s)	843, 1011
NspI	RCATGY	1 cut(s)	1009
PaeI	GCATGC	1 cut(s)	1009
PaeR7I	CTCGAG	1 cut(s)	330
PaqCI	CACCTGC	1 cut(s)	2013
PceI	AGGCCT	2 cut(s)	32, 1175
PciSI	GCTCTTC	1 cut(s)	810
PcsI	WCGNNNNNNNCGW	2 cut(s)	49, 234
PctI	GAATGC	2 cut(s)	1009, 1910
PdmI	GAANNNNTTC	2 cut(s)	819, 1685
PfeI	GAWTC	5 cut(s)	83, 104, 380, 398, 1036
PinAI	ACCGGT	1 cut(s)	2013
PleI	GAGTC	8 cut(s)	59, 65, 71, 89, 113, 220, 1099, 1628
PpsI	GAGTC	8 cut(s)	59, 65, 71, 89, 113, 220, 1099, 1628
Ppu21I	YACGTR	1 cut(s)	1990
PshAI	GACNNNNGTC	1 cut(s)	55
PsiI	TTATAA	1 cut(s)	1874
PspN4I	GGNNCC	6 cut(s)	197, 972, 1434, 1582, 1824, 2018
PspPI	GGNCC	2 cut(s)	1432, 1889
PspXI	VCTCGAGB	1 cut(s)	330
PstI	CTGCAG	1 cut(s)	1221
PsuI	RGATCY	1 cut(s)	1347
RsaI	GTAC	7 cut(s)	89, 299, 723, 1111, 1664, 1724, 2018
RsaNI	GTAC	7 cut(s)	88, 298, 722, 1110, 1663, 1723, 2017
RseI	CAYNNNNRTG	4 cut(s)	421, 738, 836, 1410
SalI	GTCGAC	1 cut(s)	42
SapI	GCTCTTC	1 cut(s)	810
SaqAI	TTAA	5 cut(s)	483, 534, 834, 1959, 1998
Sau3AI	GATC	5 cut(s)	661, 684, 946, 1347, 1741
Sau96I	GGNCC	2 cut(s)	1432, 1889
ScaI	AGTACT	1 cut(s)	299
SchI	GAGTC	8 cut(s)	59, 65, 71, 89, 113, 221, 1100, 1628
SduI	GDGCHC	2 cut(s)	243, 559
SfaNI	GCATC	8 cut(s)	742, 850, 928, 1089, 1222, 1291, 1526, 1588
SfcI	CTRYAG	1 cut(s)	1217
Sfr274I	CTCGAG	1 cut(s)	330
SinI	GGWCC	1 cut(s)	1432
SlaI	CTCGAG	1 cut(s)	330
SmiMI	CAYNNNNRTG	4 cut(s)	421, 738, 836, 1410
SmlI	CTYRAG	2 cut(s)	330, 1226
SmoI	CTYRAG	2 cut(s)	330, 1226
SphI	GCATGC	1 cut(s)	1009
Sse9I	AATT	6 cut(s)	714, 1086, 1253, 1500, 1781, 1980
SseBI	AGGCCT	2 cut(s)	32, 1175
SsiI	CCGC	6 cut(s)	141, 187, 190, 247, 326, 2020
SspI	AATATT	2 cut(s)	1605, 1685
SspMI	CTAG	3 cut(s)	954, 1014, 1671
StuI	AGGCCT	2 cut(s)	32, 1175
StyI	CCWWGG	4 cut(s)	1116, 1170, 1575, 1584
TaaI	ACNGT	5 cut(s)	361, 802, 1061, 1080, 1694
TaiI	ACGT	2 cut(s)	276, 1992
TasI	AATT	6 cut(s)	714, 1086, 1253, 1500, 1781, 1980
TatI	WGTACW	3 cut(s)	297, 721, 1722
TauI	GCSGC	3 cut(s)	189, 192, 329
TfiI	GAWTC	5 cut(s)	83, 104, 380, 398, 1036
Tru1I	TTAA	5 cut(s)	483, 534, 834, 1959, 1998
Tru9I	TTAA	5 cut(s)	483, 534, 834, 1959, 1998
TseFI	GTSAC	2 cut(s)	274, 1092
Tsp45I	GTSAC	2 cut(s)	274, 1092
TspDTI	ATGAA	7 cut(s)	234, 1374, 1428, 1571, 1583, 1725, 1871
TspGWI	ACGGA	2 cut(s)	117, 1904
VpaK11BI	GGWCC	1 cut(s)	1432
XapI	RAATTY	3 cut(s)	1500, 1781, 1980
XceI	RCATGY	1 cut(s)	1009
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1573, 1582
XhoI	CTCGAG	1 cut(s)	330
XmiI	GTMKAC	2 cut(s)	43, 1992
XmnI	GAANNNNTTC	2 cut(s)	819, 1685
XspI	CTAG	3 cut(s)	954, 1014, 1671
ZrmI	AGTACT	1 cut(s)	299
Zsp2I	ATGCAT	2 cut(s)	843, 1011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.