Rh4AG337800

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
64678971 .. 64688869
9899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG337800.1

Sequence Viewer

Length: 1158 bp
ATGCAGACATCTCCAGCCTCGTCGATCAACACCAGGATAAGCTTGGCGTTTCCGTCGCAGCCCTCGTTCCTGCCGGTCGCCCTGCGCTATAGCTTTACTACTCACTTCCAAGTTCCAACCCCATCCCACATCTCATCTGAGAGAGAGACTCAGACAGAGAAGAGAGAGAGAGAGAGAGAGATACAAATAGCTTTGGGTTTGGGCTTTTGCCTCATATTTTCGTTTCTGTCTTTCTCTGTCGGTACCATGAATCCATTAGACCTCAACAACTTGCCTGATGATCATAATCGAGACAGAGATAGAGATAGAGACCGAGAAAATGGTAAACAATTCATCGACGGCGACGCCTCCTCCTCCTCAGGCCATAGAAAAAAGAAAAGCGGCGGAAAAGATGGAAAAGACGAGAGTGGGAAGGTCTACGAGTGTAGGTTTTGTTCCCTCAAGTTCTGCAAATCTCAAGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAGACAGAGACACTAAACCGTGCTCGTCAGCTGGTCTTCAACAACGATAACCTAGCCGCTCCTGGCCCTCCTCATTTAGGCTGCTGCCATCCGATGACATCTCCAGGAGGGTATCCCCACCCAATTGCAGGAGCTCCCGGTGACCCAACAACATTACCTCTGAGATTCCCTGCAAGAATGTTTTCTGGTTCTCCTTCCACACAACTCATACCACCGCCGACAGCAGCGGCCCCAGGTCAACCACCGCAAGCCGTACAGCCCTCGCAGCCCTACTTATACCCCTCTCCTTCACGCCCCATGTCCTACCCTTCTTCACACTATCAACACCAAAATGACTACTATGTCGGTCATGTCCTCGGTGGTAACAACACTAGTGCGTCCCAGTATGGCCATCATCTGAATGTGAGCTATGGCGCCACGGCGGGTGTACAAGATCATCATCAGTCCAACAACAACGGTTACAACAACTATACTTGTATTGGTGCTCCGGTCTCGCATAGCGGGGGGTTTGGGCAAGGCAGCAGCAGCCTGAGTTCGGAGTTGACTGGATCGGGAGGAGGAGGCGGTGTTGGTGGTGGAGCTAGGGATGGGTCTATGAGCTACTCAGGAACACAACCCCCTCCACCTCCTTCCATCAACCGATTTCAACATGGCTTCTAA

Protein Analysis

385

Amino Acids

41.48

Weight (kDa)

8.63

Isoelectric Point (pI)

51.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 839
Acc65I GGTACC 1 cut(s) 242
AccB1I GGYRCC 2 cut(s) 242, 911
AccBSI CCGCTC 1 cut(s) 557
AccI GTMKAC 1 cut(s) 417
AclWI GGATC 1 cut(s) 1054
AcoI YGGCCR 1 cut(s) 886
AcyI GRCGYC 2 cut(s) 345, 912
AfaI GTAC 3 cut(s) 244, 753, 927
AfiI CCNNNNNNNGG 4 cut(s) 496, 575, 626, 1033
AgsI TTSAA 2 cut(s) 538, 1145
AhlI ACTAGT 1 cut(s) 869
AjnI CCWGG 4 cut(s) 32, 559, 601, 730
AluBI AGCT 9 cut(s) 42, 93, 191, 461, 529, 632, 906, 1079, 1098
AluI AGCT 9 cut(s) 42, 93, 191, 461, 529, 632, 906, 1079, 1098
Alw21I GWGCWC 3 cut(s) 523, 634, 985
Alw26I GTCTC 6 cut(s) 140, 285, 303, 494, 500, 994
AlwI GGATC 1 cut(s) 1054
AoxI GGCC 4 cut(s) 361, 562, 726, 886
ApeKI GCWGC 8 cut(s) 58, 579, 582, 722, 763, 1017, 1020, 1023
Asp700I GAANNNNTTC 1 cut(s) 679
Asp718I GGTACC 1 cut(s) 242
AspLEI GCGC 2 cut(s) 87, 914
AspS9I GGNCC 2 cut(s) 563, 727
AsuC2I CCSGG 1 cut(s) 636
AsuHPI GGTGA 1 cut(s) 650
AxyI CCTNAGG 1 cut(s) 358
BalI TGGCCA 1 cut(s) 888
BanI GGYRCC 2 cut(s) 242, 911
BanII GRGCYC 1 cut(s) 634
BbsI GAAGAC 1 cut(s) 526
Bbv12I GWGCWC 3 cut(s) 523, 634, 985
BbvI GCAGC 8 cut(s) 70, 566, 569, 734, 775, 1029, 1032, 1035
BccI CCATC 6 cut(s) 130, 386, 594, 897, 1079, 1139
BceAI ACGGC 3 cut(s) 355, 734, 933
BciT130I CCWGG 4 cut(s) 34, 561, 603, 732
BciVI GTATCC 1 cut(s) 621
BclI TGATCA 1 cut(s) 280
BcnI CCSGG 1 cut(s) 636
BcoDI GTCTC 6 cut(s) 140, 285, 303, 494, 500, 994
BcuI ACTAGT 1 cut(s) 869
BfaI CTAG 3 cut(s) 551, 870, 1080
BfmI CTRYAG 1 cut(s) 88
BfoI RGCGCY 1 cut(s) 915
BfuI GTATCC 1 cut(s) 621
Bme1390I CCNGG 5 cut(s) 34, 561, 603, 636, 732
BmgT120I GGNCC 2 cut(s) 563, 727
BmiI GGNNCC 3 cut(s) 244, 729, 913
BmrFI CCNGG 5 cut(s) 34, 561, 603, 636, 732
BmrI ACTGGG 1 cut(s) 874
BmuI ACTGGG 1 cut(s) 874
BpiI GAAGAC 1 cut(s) 526
BplI GAGNNNNNCTC 2 cut(s) 133, 165
BpmI CTGGAG 1 cut(s) 585
BpuEI CTTGAG 2 cut(s) 425, 441
BpuMI CCSGG 1 cut(s) 636
BsaBI GATNNNNATC 2 cut(s) 285, 936
BsaHI GRCGYC 2 cut(s) 345, 912
BsaI GGTCTC 2 cut(s) 303, 994
BsaJI CCNNGG 3 cut(s) 730, 853, 915
BsaWI WCCGGW 1 cut(s) 985
BsaXI ACNNNNNCTCC 4 cut(s) 335, 365, 1050, 1080
Bsc4I CCNNNNNNNGG 4 cut(s) 496, 575, 626, 1033
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 2 cut(s) 880, 1048
Bse21I CCTNAGG 1 cut(s) 358
Bse8I GATNNNNATC 2 cut(s) 285, 936
BseBI CCWGG 4 cut(s) 34, 561, 603, 732
BseDI CCNNGG 3 cut(s) 730, 853, 915
BseGI GGATG 3 cut(s) 122, 586, 1090
BseJI GATNNNNATC 2 cut(s) 285, 936
BseLI CCNNNNNNNGG 4 cut(s) 496, 575, 626, 1033
BseMII CTCAG 6 cut(s) 129, 164, 372, 650, 1019, 1116
BseNI ACTGG 2 cut(s) 880, 1048
BseRI GAGGAG 6 cut(s) 340, 343, 346, 558, 1068, 1071
BseXI GCAGC 8 cut(s) 70, 566, 569, 734, 775, 1029, 1032, 1035
Bsh1285I CGRYCG 1 cut(s) 78
BshFI GGCC 4 cut(s) 363, 564, 728, 888
BshNI GGYRCC 2 cut(s) 242, 911
BsiEI CGRYCG 1 cut(s) 78
BsiHKAI GWGCWC 3 cut(s) 523, 634, 985
BsiSI CCGG 3 cut(s) 74, 636, 986
BslFI GGGAC 2 cut(s) 483, 862
BslI CCNNNNNNNGG 4 cut(s) 496, 575, 626, 1033
BsmAI GTCTC 6 cut(s) 140, 285, 303, 494, 500, 994
BsmFI GGGAC 2 cut(s) 483, 862
BsnI GGCC 4 cut(s) 363, 564, 728, 888
Bso31I GGTCTC 2 cut(s) 303, 994
Bsp1286I GDGCHC 3 cut(s) 523, 634, 985
Bsp1407I TGTACA 1 cut(s) 925
Bsp143I GATC 4 cut(s) 24, 280, 931, 1046
BspANI GGCC 4 cut(s) 363, 564, 728, 888
BspCNI CTCAG 6 cut(s) 130, 163, 371, 651, 1020, 1115
BspLI GGNNCC 3 cut(s) 244, 729, 913
BspPI GGATC 1 cut(s) 1054
BspT107I GGYRCC 2 cut(s) 242, 911
BspTNI GGTCTC 2 cut(s) 303, 994
BsrBI CCGCTC 1 cut(s) 557
BsrFI RCCGGY 1 cut(s) 73
BsrGI TGTACA 1 cut(s) 925
BsrI ACTGG 2 cut(s) 880, 1048
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 3 cut(s) 730, 853, 915
BssMI GATC 4 cut(s) 24, 280, 931, 1046
BssNI GRCGYC 2 cut(s) 345, 912
Bst2UI CCWGG 4 cut(s) 34, 561, 603, 732
Bst4CI ACNGT 2 cut(s) 518, 956
Bst6I CTCTTC 1 cut(s) 155
BstACI GRCGYC 2 cut(s) 345, 912
BstAUI TGTACA 1 cut(s) 925
BstC8I GCNNGC 1 cut(s) 747
BstDEI CTNAG 6 cut(s) 138, 150, 358, 659, 1028, 1102
BstDSI CCRYGG 1 cut(s) 915
BstEII GGTNACC 1 cut(s) 638
BstENI CCTNNNNNAGG 1 cut(s) 573
BstF5I GGATG 3 cut(s) 122, 586, 1090
BstH2I RGCGCY 1 cut(s) 915
BstHHI GCGC 2 cut(s) 87, 914
BstKTI GATC 4 cut(s) 27, 283, 934, 1049
BstMAI GTCTC 6 cut(s) 140, 285, 303, 494, 500, 994
BstMBI GATC 4 cut(s) 24, 280, 931, 1046
BstMCI CGRYCG 1 cut(s) 78
BstMWI GCNNNNNNNGC 2 cut(s) 763, 1023
BstNI CCWGG 4 cut(s) 34, 561, 603, 732
BstPI GGTNACC 1 cut(s) 638
BstSCI CCNGG 5 cut(s) 32, 559, 601, 634, 730
BstSFI CTRYAG 1 cut(s) 88
BstV1I GCAGC 8 cut(s) 70, 566, 569, 734, 775, 1029, 1032, 1035
BstV2I GAAGAC 1 cut(s) 526
Bsu36I CCTNAGG 1 cut(s) 358
BsuI GTATCC 1 cut(s) 621
BsuRI GGCC 4 cut(s) 363, 564, 728, 888
BtgI CCRYGG 1 cut(s) 915
BtsCI GGATG 3 cut(s) 122, 586, 1090
Cac8I GCNNGC 1 cut(s) 747
CfoI GCGC 2 cut(s) 87, 914
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 2 cut(s) 563, 727
CseI GACGC 2 cut(s) 353, 864
Csp6I GTAC 3 cut(s) 243, 752, 926
CviAII CATG 5 cut(s) 247, 475, 796, 848, 1148
CviQI GTAC 3 cut(s) 243, 752, 926
DdeI CTNAG 6 cut(s) 138, 150, 358, 659, 1028, 1102
DinI GGCGCC 1 cut(s) 913
DpnI GATC 4 cut(s) 26, 282, 933, 1048
DpnII GATC 4 cut(s) 24, 280, 931, 1046
DrdI GACNNNNNNGTC 1 cut(s) 839
DseDI GACNNNNNNGTC 1 cut(s) 839
EaeI YGGCCR 1 cut(s) 886
Eam1104I CTCTTC 1 cut(s) 155
EarI CTCTTC 1 cut(s) 155
EciI GGCGGA 1 cut(s) 399
Ecl136II GAGCTC 1 cut(s) 632
Eco24I GRGCYC 1 cut(s) 634
Eco31I GGTCTC 2 cut(s) 303, 994
Eco53kI GAGCTC 1 cut(s) 632
Eco81I CCTNAGG 1 cut(s) 358
Eco91I GGTNACC 1 cut(s) 638
EcoICRI GAGCTC 1 cut(s) 632
EcoNI CCTNNNNNAGG 1 cut(s) 573
EcoO65I GGTNACC 1 cut(s) 638
EcoRII CCWGG 4 cut(s) 32, 559, 601, 730
EcoT38I GRGCYC 1 cut(s) 634
EgeI GGCGCC 1 cut(s) 913
EheI GGCGCC 1 cut(s) 913
FaeI CATG 5 cut(s) 250, 478, 799, 851, 1151
FaqI GGGAC 2 cut(s) 483, 862
FatI CATG 5 cut(s) 246, 474, 795, 847, 1147
FauI CCCGC 2 cut(s) 913, 992
FbaI TGATCA 1 cut(s) 280
FblI GTMKAC 1 cut(s) 417
FokI GGATG 3 cut(s) 109, 573, 1097
FriOI GRGCYC 1 cut(s) 634
FspBI CTAG 3 cut(s) 551, 870, 1080
GlaI GCGC 2 cut(s) 86, 913
GsuI CTGGAG 1 cut(s) 585
HaeII RGCGCY 1 cut(s) 915
HaeIII GGCC 4 cut(s) 363, 564, 728, 888
HapII CCGG 3 cut(s) 74, 636, 986
HgaI GACGC 2 cut(s) 353, 864
HhaI GCGC 2 cut(s) 87, 914
Hin1I GRCGYC 2 cut(s) 345, 912
Hin1II CATG 5 cut(s) 250, 478, 799, 851, 1151
Hin6I GCGC 2 cut(s) 85, 912
HinP1I GCGC 2 cut(s) 85, 912
HincII GTYRAC 2 cut(s) 737, 1041
HindII GTYRAC 2 cut(s) 737, 1041
HindIII AAGCTT 1 cut(s) 40
HinfI GANTC 3 cut(s) 148, 250, 663
HpaII CCGG 3 cut(s) 74, 636, 986
HphI GGTGA 1 cut(s) 650
Hpy166II GTNNAC 5 cut(s) 326, 418, 737, 926, 1041
Hpy188I TCNGA 6 cut(s) 139, 153, 591, 660, 897, 1036
Hpy188III TCNNGA 3 cut(s) 290, 1050, 1104
Hpy8I GTNNAC 5 cut(s) 326, 418, 737, 926, 1041
Hpy99I CGWCG 4 cut(s) 25, 58, 341, 347
HpyAV CCTTC 5 cut(s) 406, 702, 795, 816, 1137
HpyCH4III ACNGT 2 cut(s) 518, 956
HpyCH4V TGCA 4 cut(s) 4, 450, 626, 671
HpyF10VI GCNNNNNNNGC 2 cut(s) 763, 1023
HpyF3I CTNAG 6 cut(s) 138, 150, 358, 659, 1028, 1102
Hsp92I GRCGYC 2 cut(s) 345, 912
Hsp92II CATG 5 cut(s) 250, 478, 799, 851, 1151
HspAI GCGC 2 cut(s) 85, 912
KasI GGCGCC 1 cut(s) 911
KpnI GGTACC 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 280
Kzo9I GATC 4 cut(s) 24, 280, 931, 1046
LmnI GCTCC 5 cut(s) 562, 629, 637, 988, 1076
Lsp1109I GCAGC 8 cut(s) 70, 566, 569, 734, 775, 1029, 1032, 1035
MaeI CTAG 3 cut(s) 551, 870, 1080
MaeIII GTNAC 3 cut(s) 638, 860, 956
MalI GATC 4 cut(s) 26, 282, 933, 1048
MbiI CCGCTC 1 cut(s) 557
MboI GATC 4 cut(s) 24, 280, 931, 1046
MboII GAAGA 3 cut(s) 172, 526, 801
MfeI CAATTG 1 cut(s) 621
MhlI GDGCHC 3 cut(s) 523, 634, 985
MlsI TGGCCA 1 cut(s) 888
MluCI AATT 2 cut(s) 329, 621
MluNI TGGCCA 1 cut(s) 888
Mly113I GGCGCC 1 cut(s) 912
MlyI GAGTC 1 cut(s) 142
MmeI TCCRAC 2 cut(s) 140, 969
Mox20I TGGCCA 1 cut(s) 888
MroXI GAANNNNTTC 1 cut(s) 679
MscI TGGCCA 1 cut(s) 888
MslI CAYNNNNRTG 2 cut(s) 828, 897
Msp20I TGGCCA 1 cut(s) 888
MspA1I CMGCKG 2 cut(s) 529, 725
MspI CCGG 3 cut(s) 74, 636, 986
MspR9I CCNGG 5 cut(s) 34, 561, 603, 636, 732
MunI CAATTG 1 cut(s) 621
MvaI CCWGG 4 cut(s) 34, 561, 603, 732
MwoI GCNNNNNNNGC 2 cut(s) 763, 1023
NarI GGCGCC 1 cut(s) 912
NciI CCSGG 1 cut(s) 636
NdeII GATC 4 cut(s) 24, 280, 931, 1046
NlaIII CATG 5 cut(s) 250, 478, 799, 851, 1151
NlaIV GGNNCC 3 cut(s) 244, 729, 913
NmuCI GTSAC 1 cut(s) 638
PcsI WCGNNNNNNNCGW 1 cut(s) 62
PdmI GAANNNNTTC 1 cut(s) 679
PfeI GAWTC 2 cut(s) 250, 663
PfoI TCCNGGA 1 cut(s) 601
PleI GAGTC 1 cut(s) 142
PluTI GGCGCC 1 cut(s) 915
PpsI GAGTC 1 cut(s) 142
Psp124BI GAGCTC 1 cut(s) 634
Psp6I CCWGG 4 cut(s) 32, 559, 601, 730
PspEI GGTNACC 1 cut(s) 638
PspGI CCWGG 4 cut(s) 32, 559, 601, 730
PspN4I GGNNCC 3 cut(s) 244, 729, 913
PspPI GGNCC 2 cut(s) 563, 727
PsrI GAACNNNNNNTAC 2 cut(s) 418, 450
PvuII CAGCTG 1 cut(s) 529
RsaI GTAC 3 cut(s) 244, 753, 927
RsaNI GTAC 3 cut(s) 243, 752, 926
RseI CAYNNNNRTG 2 cut(s) 828, 897
SacI GAGCTC 1 cut(s) 634
Sau3AI GATC 4 cut(s) 24, 280, 931, 1046
Sau96I GGNCC 2 cut(s) 563, 727
SchI GAGTC 1 cut(s) 142
ScrFI CCNGG 5 cut(s) 34, 561, 603, 636, 732
SduI GDGCHC 3 cut(s) 523, 634, 985
SfcI CTRYAG 1 cut(s) 88
SfoI GGCGCC 1 cut(s) 913
SmiMI CAYNNNNRTG 2 cut(s) 828, 897
SmlI CTYRAG 2 cut(s) 440, 456
SmoI CTYRAG 2 cut(s) 440, 456
SpeI ACTAGT 1 cut(s) 869
Sse9I AATT 2 cut(s) 329, 621
SspDI GGCGCC 1 cut(s) 911
SspMI CTAG 3 cut(s) 551, 870, 1080
SstI GAGCTC 1 cut(s) 634
StyD4I CCNGG 5 cut(s) 32, 559, 601, 634, 730
TaaI ACNGT 2 cut(s) 518, 956
TaqI TCGA 3 cut(s) 23, 289, 336
TaqII GACCGA 2 cut(s) 327, 833
TasI AATT 2 cut(s) 329, 621
TatI WGTACW 1 cut(s) 925
TauI GCSGC 3 cut(s) 384, 557, 728
TfiI GAWTC 2 cut(s) 250, 663
TseFI GTSAC 1 cut(s) 638
TseI GCWGC 8 cut(s) 58, 579, 582, 722, 763, 1017, 1020, 1023
Tsp45I GTSAC 1 cut(s) 638
TspDTI ATGAA 3 cut(s) 263, 322, 491
TspGWI ACGGA 1 cut(s) 42
XagI CCTNNNNNAGG 1 cut(s) 573
XcmI CCANNNNNNNNNTGG 1 cut(s) 40
XmiI GTMKAC 1 cut(s) 417
XmnI GAANNNNTTC 1 cut(s) 679
XspI CTAG 3 cut(s) 551, 870, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.