Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0010101

Physical Location & Seq

Genomic Coordinates Reverse (-)

61747452 .. 61757386

Gene Structure 9935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG360400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGCCGCCGGCGACGGAGGAACCTTACACGACGGCGTCCTCGATGACGATGATGATGATCGACAAGATTTATGAGTTCTCGGCCCCGTGCTTCTTCGATTTCATCAAGGACGAGACTGACGACGACAAGATCAATGCCGAGCTCAGGTCCCCGTCTCGTGTTAGCGCTACAAACAACGAAGAGGCTGCTGCCAAGGTAGCTGCAACTAATGCCGACAATGGAGCTCCAACAATGTATCATCCTTCACATATTAAAACTGCTAGCAATGCCTCTGCCGTGCAATCTGTTGTGGCGGTTGAGCAGCATGAATGTACTCAGGGTTTCCTTATGCATTTGCTCAAGTGGCTGTTGAATCCTAGGAACAAGGCATTGTTAGAGAGTTGGAAAAAGTCCGGTTCCTACTCTATCAGGGGTTTGGGGCGAGGTCTCGTTGTAGATGCGGTGGTGCTTGGTGCTTGGTTGGATCGATGGTTGAAGGATAAGGGCGGTGGGAATCCGGTTTCTTTTTCTGTCGGTGGATTTGGATCTTCATCTACTTTGGAGGGGATCGGTGGTATCTATCTACAATTCCGGGACTATGACGCTATCTGGACGGGGCAGAAGAACGTCAGATCCTGGTGCGAGGTGAGGGGATTGGGTTCTAGTGGCGATGGCCGAGAGGTGGTGTCGGCTTGTTGGGACTTCGATGGCGGCGATTTGTTGGTCGGCGATGGCTATAGCAGTTTGGCAGTCTCCTCCATTGCAGCTTTGGGTTTGGGCTTTTGCCTCATATTTTCGTTTCTGTCTTTCTCTGTCGGTACCATGAATCCATTAGACCTCAACAACTTGCCTGATGATCATAATCGAGACAGGGATAGAGATAGAGACCGAGAAAATGGCAAACAATTCATCGACGGCGACGCCTCCTCCTCCTCAGGCCATAGAAAAAAGAAAAGCGGCGGAAAAGATGGAAAAGACGAGAGTGGGAAGGTCTACGAGTGTAGGTTTTGTTCCCTCAAGTTCTGCAAATCTCAAGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAGACAGAGACACTAAACCGTGCTCGTCAGCTGGTCTTCAACAACGATAACCTAGCCGCTCCTGGCCCTCCACATTTAGGCTGCTGCCATCCGATGACATCTCCAGGAGGGTATCCCCACCCAATTGCAGGAGCTCCCGGTGACCCAACAACATTACCTCTGAGATTCCCTGCAAGAATGTTTTCTGGTTCTCCCTCCACACAACTCATACCACCACCGCCAGCAGCGGCCCCAGGTCAACCACCACAAGCCGTACAGCCCTCGCAGCCCTACTTATACCCCTCTCCTTCACGCCCCATGTCCTACCCTTCTTCACACTATCAACACCAAAATGACTACTATGTCGGTCATGTCCTCGGTGGTAACAACACTAGTGCATCCCAGTATGGCCATCATCTGAATGTGAGCTATGGCGCCACGGCGGGTGTACAAGATCATCATCAGTCCAACAACAACGGTTACAACAACTATACTTGTATTGGTGCTCCGGTCACGCATAGCGGGGGGTTTGGGCAAGGCAGCAGCAGCCTGAGTTCGGAGTTGACTGGATCGGGAGGAGGAGGCGGTGTTGGTGGTGGAGCTATGAGCTACTCAGGAACACAACCCCCTCCACCTCCTTCCATCAACCGATTTCAACATGGCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001708 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0008285 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010093 GO:0010094 GO:0010097 GO:0010158 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042127 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048443 GO:0048444 GO:0048445 GO:0048448 GO:0048449 GO:0048455 GO:0048462 GO:0048466 GO:0048467 GO:0048519 GO:0048523 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

566

Amino Acids

60.58

Weight (kDa)

6.46

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13400 AT1G68480 AT1G68480 AT1G68480
fragaria_vesca	FvH4_4g27300 FvH4_4g27300
malus_domestica	MD13G1040900.v1.1 MD16G1042200.v1.1
prunus_persica	Prupe.1G311900_v2.0.a1
pyrus_communis	pycom13g03530 pycom16g03650
rosa_chinensis	RchiOBHm_Chr4g0435091
rosa_laevigata	RLG00000006621
rosa_roxburghii	Rroxscaffold_5G00376280
rosa_rugosa	Rorug04G0282300 Rorug04G0282300
rosa_samantha	Rh4AG337800 Rh4BG345700 Rh4CG360400 Rh4DG340300
rosa_wichuraiana	Rw4G029450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1394
Acc65I	GGTACC	1 cut(s)	797
AccB1I	GGYRCC	2 cut(s)	797, 1466
AccBSI	CCGCTC	1 cut(s)	1112
AccI	GTMKAC	1 cut(s)	972
AclWI	GGATC	5 cut(s)	471, 532, 554, 606, 1609
AcoI	YGGCCR	2 cut(s)	652, 1441
AcyI	GRCGYC	3 cut(s)	35, 900, 1467
AfaI	GTAC	4 cut(s)	313, 799, 1308, 1482
AfeI	AGCGCT	1 cut(s)	166
AfiI	CCNNNNNNNGG	6 cut(s)	144, 661, 1051, 1130, 1181, 1588
AgsI	TTSAA	4 cut(s)	352, 475, 1093, 1688
AhlI	ACTAGT	1 cut(s)	1424
AjnI	CCWGG	4 cut(s)	614, 1114, 1156, 1285
AloI	GAACNNNNNNTCC	2 cut(s)	596, 628
Alw21I	GWGCWC	5 cut(s)	144, 226, 1078, 1189, 1540
Alw26I	GTCTC	8 cut(s)	107, 159, 431, 736, 840, 858, 1049, 1055
AlwI	GGATC	5 cut(s)	471, 532, 554, 606, 1609
AlwNI	CAGNNNCTG	1 cut(s)	615
Aor51HI	AGCGCT	1 cut(s)	166
AoxI	GGCC	6 cut(s)	81, 652, 916, 1117, 1281, 1441
Asp700I	GAANNNNTTC	1 cut(s)	1234
Asp718I	GGTACC	1 cut(s)	797
AspA2I	CCTAGG	1 cut(s)	356
AspLEI	GCGC	2 cut(s)	167, 1469
AspS9I	GGNCC	4 cut(s)	82, 147, 1118, 1282
AsuC2I	CCSGG	2 cut(s)	572, 1191
AsuHPI	GGTGA	2 cut(s)	637, 1205
AsuNHI	GCTAGC	1 cut(s)	260
AvaII	GGWCC	1 cut(s)	147
AvrII	CCTAGG	1 cut(s)	356
AxyI	CCTNAGG	1 cut(s)	913
BalI	TGGCCA	1 cut(s)	1443
BanI	GGYRCC	2 cut(s)	797, 1466
BanII	GRGCYC	3 cut(s)	144, 226, 1189
BauI	CACGAG	1 cut(s)	156
BbsI	GAAGAC	1 cut(s)	1081
Bbv12I	GWGCWC	5 cut(s)	144, 226, 1078, 1189, 1540
BccI	CCATC	8 cut(s)	462, 644, 680, 704, 941, 1149, 1452, 1682
BceAI	ACGGC	5 cut(s)	48, 260, 910, 1289, 1488
BcgI	CGANNNNNNTGC	2 cut(s)	167, 201
BciT130I	CCWGG	4 cut(s)	616, 1116, 1158, 1287
BciVI	GTATCC	1 cut(s)	1176
BclI	TGATCA	1 cut(s)	835
BcnI	CCSGG	2 cut(s)	572, 1191
BcoDI	GTCTC	8 cut(s)	107, 159, 431, 736, 840, 858, 1049, 1055
BcuI	ACTAGT	1 cut(s)	1424
BfaI	CTAG	5 cut(s)	261, 357, 642, 1106, 1425
BfmI	CTRYAG	1 cut(s)	715
BfoI	RGCGCY	2 cut(s)	168, 1470
BfuI	GTATCC	1 cut(s)	1176
BlnI	CCTAGG	1 cut(s)	356
Bme1390I	CCNGG	6 cut(s)	572, 616, 1116, 1158, 1191, 1287
Bme18I	GGWCC	1 cut(s)	147
BmgT120I	GGNCC	4 cut(s)	82, 147, 1118, 1282
BmiI	GGNNCC	7 cut(s)	21, 84, 149, 397, 799, 1284, 1468
BmrFI	CCNGG	6 cut(s)	572, 616, 1116, 1158, 1191, 1287
BmrI	ACTGGG	1 cut(s)	1429
BmsI	GCATC	2 cut(s)	427, 1439
BmtI	GCTAGC	1 cut(s)	264
BmuI	ACTGGG	1 cut(s)	1429
BpiI	GAAGAC	1 cut(s)	1081
BpmI	CTGGAG	1 cut(s)	1140
Bpu10I	CCTNAGC	1 cut(s)	143
BpuEI	CTTGAG	3 cut(s)	323, 980, 996
BpuMI	CCSGG	2 cut(s)	572, 1191
Bsa29I	ATCGAT	1 cut(s)	466
BsaBI	GATNNNNATC	5 cut(s)	56, 523, 529, 840, 1491
BsaHI	GRCGYC	3 cut(s)	35, 900, 1467
BsaI	GGTCTC	2 cut(s)	431, 858
BsaJI	CCNNGG	5 cut(s)	192, 356, 1285, 1408, 1470
BsaWI	WCCGGW	3 cut(s)	392, 496, 1540
BsaXI	ACNNNNNCTCC	4 cut(s)	890, 920, 1605, 1635
Bsc4I	CCNNNNNNNGG	6 cut(s)	144, 661, 1051, 1130, 1181, 1588
Bse118I	RCCGGY	1 cut(s)	7
Bse1I	ACTGG	2 cut(s)	1435, 1603
Bse21I	CCTNAGG	1 cut(s)	913
Bse3DI	GCAATG	2 cut(s)	271, 738
Bse8I	GATNNNNATC	5 cut(s)	56, 523, 529, 840, 1491
BseBI	CCWGG	4 cut(s)	616, 1116, 1158, 1287
BseCI	ATCGAT	1 cut(s)	466
BseDI	CCNNGG	5 cut(s)	192, 356, 1285, 1408, 1470
BseGI	GGATG	3 cut(s)	238, 1141, 1430
BseJI	GATNNNNATC	5 cut(s)	56, 523, 529, 840, 1491
BseLI	CCNNNNNNNGG	6 cut(s)	144, 661, 1051, 1130, 1181, 1588
BseMI	GCAATG	2 cut(s)	271, 738
BseMII	CTCAG	6 cut(s)	157, 329, 927, 1205, 1574, 1659
BseNI	ACTGG	2 cut(s)	1435, 1603
BseRI	GAGGAG	6 cut(s)	724, 895, 898, 901, 1623, 1626
BshFI	GGCC	6 cut(s)	83, 654, 918, 1119, 1283, 1443
BshNI	GGYRCC	2 cut(s)	797, 1466
BshVI	ATCGAT	1 cut(s)	466
BsiHKAI	GWGCWC	5 cut(s)	144, 226, 1078, 1189, 1540
BsiSI	CCGG	6 cut(s)	8, 393, 497, 571, 1191, 1541
BslFI	GGGAC	4 cut(s)	133, 587, 692, 1038
BslI	CCNNNNNNNGG	6 cut(s)	144, 661, 1051, 1130, 1181, 1588
BsmAI	GTCTC	8 cut(s)	107, 159, 431, 736, 840, 858, 1049, 1055
BsmBI	CGTCTC	1 cut(s)	159
BsmFI	GGGAC	4 cut(s)	133, 587, 692, 1038
BsnI	GGCC	6 cut(s)	83, 654, 918, 1119, 1283, 1443
Bso31I	GGTCTC	2 cut(s)	431, 858
Bsp1286I	GDGCHC	5 cut(s)	144, 226, 1078, 1189, 1540
Bsp1407I	TGTACA	1 cut(s)	1480
Bsp143I	GATC	9 cut(s)	57, 129, 463, 524, 546, 611, 835, 1486, 1601
BspANI	GGCC	6 cut(s)	83, 654, 918, 1119, 1283, 1443
BspCNI	CTCAG	6 cut(s)	156, 328, 926, 1206, 1575, 1658
BspDI	ATCGAT	1 cut(s)	466
BspLI	GGNNCC	7 cut(s)	21, 84, 149, 397, 799, 1284, 1468
BspOI	GCTAGC	1 cut(s)	264
BspPI	GGATC	5 cut(s)	471, 532, 554, 606, 1609
BspT107I	GGYRCC	2 cut(s)	797, 1466
BspTNI	GGTCTC	2 cut(s)	431, 858
BsrBI	CCGCTC	1 cut(s)	1112
BsrDI	GCAATG	2 cut(s)	271, 738
BsrFI	RCCGGY	1 cut(s)	7
BsrGI	TGTACA	1 cut(s)	1480
BsrI	ACTGG	2 cut(s)	1435, 1603
BssAI	RCCGGY	1 cut(s)	7
BssECI	CCNNGG	5 cut(s)	192, 356, 1285, 1408, 1470
BssMI	GATC	9 cut(s)	57, 129, 463, 524, 546, 611, 835, 1486, 1601
BssNI	GRCGYC	3 cut(s)	35, 900, 1467
BssSI	CACGAG	1 cut(s)	156
BssT1I	CCWWGG	2 cut(s)	192, 356
Bst2BI	CACGAG	1 cut(s)	156
Bst2UI	CCWGG	4 cut(s)	616, 1116, 1158, 1287
Bst4CI	ACNGT	2 cut(s)	1073, 1511
Bst6I	CTCTTC	1 cut(s)	174
BstACI	GRCGYC	3 cut(s)	35, 900, 1467
BstAPI	GCANNNNNTGC	1 cut(s)	209
BstAUI	TGTACA	1 cut(s)	1480
BstC8I	GCNNGC	3 cut(s)	9, 262, 1275
BstDEI	CTNAG	6 cut(s)	143, 315, 913, 1214, 1583, 1645
BstDSI	CCRYGG	1 cut(s)	1470
BstEII	GGTNACC	1 cut(s)	1193
BstF5I	GGATG	3 cut(s)	238, 1141, 1430
BstH2I	RGCGCY	2 cut(s)	168, 1470
BstHHI	GCGC	2 cut(s)	167, 1469
BstKTI	GATC	9 cut(s)	60, 132, 466, 527, 549, 614, 838, 1489, 1604
BstMAI	GTCTC	8 cut(s)	107, 159, 431, 736, 840, 858, 1049, 1055
BstMBI	GATC	9 cut(s)	57, 129, 463, 524, 546, 611, 835, 1486, 1601
BstMWI	GCNNNNNNNGC	6 cut(s)	197, 209, 266, 343, 1318, 1578
BstNI	CCWGG	4 cut(s)	616, 1116, 1158, 1287
BstPI	GGTNACC	1 cut(s)	1193
BstSCI	CCNGG	6 cut(s)	570, 614, 1114, 1156, 1189, 1285
BstSFI	CTRYAG	1 cut(s)	715
BstV2I	GAAGAC	1 cut(s)	1081
BstX2I	RGATCY	2 cut(s)	524, 611
BstYI	RGATCY	2 cut(s)	524, 611
Bsu15I	ATCGAT	1 cut(s)	466
Bsu36I	CCTNAGG	1 cut(s)	913
BsuI	GTATCC	1 cut(s)	1176
BsuRI	GGCC	6 cut(s)	83, 654, 918, 1119, 1283, 1443
BsuTUI	ATCGAT	1 cut(s)	466
BtgI	CCRYGG	1 cut(s)	1470
BtgZI	GCGATG	2 cut(s)	663, 723
BtsCI	GGATG	3 cut(s)	238, 1141, 1430
Cac8I	GCNNGC	3 cut(s)	9, 262, 1275
CaiI	CAGNNNCTG	1 cut(s)	615
CfoI	GCGC	2 cut(s)	167, 1469
Cfr10I	RCCGGY	1 cut(s)	7
Cfr13I	GGNCC	4 cut(s)	82, 147, 1118, 1282
ClaI	ATCGAT	1 cut(s)	466
CseI	GACGC	3 cut(s)	24, 590, 908
Csp6I	GTAC	4 cut(s)	312, 798, 1307, 1481
CviAII	CATG	6 cut(s)	305, 802, 1030, 1351, 1403, 1691
CviQI	GTAC	4 cut(s)	312, 798, 1307, 1481
DdeI	CTNAG	6 cut(s)	143, 315, 913, 1214, 1583, 1645
DinI	GGCGCC	1 cut(s)	1468
DpnI	GATC	9 cut(s)	59, 131, 465, 526, 548, 613, 837, 1488, 1603
DpnII	GATC	9 cut(s)	57, 129, 463, 524, 546, 611, 835, 1486, 1601
DrdI	GACNNNNNNGTC	1 cut(s)	1394
DseDI	GACNNNNNNGTC	1 cut(s)	1394
EaeI	YGGCCR	2 cut(s)	652, 1441
Eam1104I	CTCTTC	1 cut(s)	174
EarI	CTCTTC	1 cut(s)	174
EciI	GGCGGA	1 cut(s)	954
Ecl136II	GAGCTC	3 cut(s)	142, 224, 1187
Eco130I	CCWWGG	2 cut(s)	192, 356
Eco24I	GRGCYC	3 cut(s)	144, 226, 1189
Eco31I	GGTCTC	2 cut(s)	431, 858
Eco47I	GGWCC	1 cut(s)	147
Eco47III	AGCGCT	1 cut(s)	166
Eco53kI	GAGCTC	3 cut(s)	142, 224, 1187
Eco81I	CCTNAGG	1 cut(s)	913
Eco91I	GGTNACC	1 cut(s)	1193
EcoICRI	GAGCTC	3 cut(s)	142, 224, 1187
EcoO109I	RGGNCCY	1 cut(s)	147
EcoO65I	GGTNACC	1 cut(s)	1193
EcoRII	CCWGG	4 cut(s)	614, 1114, 1156, 1285
EcoT14I	CCWWGG	2 cut(s)	192, 356
EcoT22I	ATGCAT	1 cut(s)	333
EcoT38I	GRGCYC	3 cut(s)	144, 226, 1189
EgeI	GGCGCC	1 cut(s)	1468
EheI	GGCGCC	1 cut(s)	1468
ErhI	CCWWGG	2 cut(s)	192, 356
Esp3I	CGTCTC	1 cut(s)	159
FaeI	CATG	6 cut(s)	308, 805, 1033, 1354, 1406, 1694
FaqI	GGGAC	4 cut(s)	133, 587, 692, 1038
FatI	CATG	6 cut(s)	304, 801, 1029, 1350, 1402, 1690
FauI	CCCGC	2 cut(s)	1468, 1547
FbaI	TGATCA	1 cut(s)	835
FblI	GTMKAC	1 cut(s)	972
FokI	GGATG	3 cut(s)	225, 1128, 1417
FriOI	GRGCYC	3 cut(s)	144, 226, 1189
FspBI	CTAG	5 cut(s)	261, 357, 642, 1106, 1425
GlaI	GCGC	2 cut(s)	166, 1468
GsuI	CTGGAG	1 cut(s)	1140
HaeII	RGCGCY	2 cut(s)	168, 1470
HaeIII	GGCC	6 cut(s)	83, 654, 918, 1119, 1283, 1443
HapII	CCGG	6 cut(s)	8, 393, 497, 571, 1191, 1541
HgaI	GACGC	3 cut(s)	24, 590, 908
HhaI	GCGC	2 cut(s)	167, 1469
Hin1I	GRCGYC	3 cut(s)	35, 900, 1467
Hin1II	CATG	6 cut(s)	308, 805, 1033, 1354, 1406, 1694
Hin6I	GCGC	2 cut(s)	165, 1467
HinP1I	GCGC	2 cut(s)	165, 1467
HincII	GTYRAC	2 cut(s)	1292, 1596
HindII	GTYRAC	2 cut(s)	1292, 1596
HinfI	GANTC	4 cut(s)	352, 493, 805, 1218
HpaII	CCGG	6 cut(s)	8, 393, 497, 571, 1191, 1541
HphI	GGTGA	2 cut(s)	637, 1205
Hpy166II	GTNNAC	4 cut(s)	973, 1292, 1481, 1596
Hpy188I	TCNGA	5 cut(s)	611, 1146, 1215, 1452, 1591
Hpy188III	TCNNGA	4 cut(s)	589, 845, 1605, 1647
Hpy8I	GTNNAC	4 cut(s)	973, 1292, 1481, 1596
Hpy99I	CGWCG	5 cut(s)	16, 34, 125, 896, 902
HpyAV	CCTTC	6 cut(s)	252, 469, 961, 1350, 1371, 1680
HpyCH4III	ACNGT	2 cut(s)	1073, 1511
HpyCH4IV	ACGT	1 cut(s)	606
HpyCH4V	TGCA	8 cut(s)	203, 280, 331, 743, 1005, 1181, 1226, 1430
HpyF10VI	GCNNNNNNNGC	6 cut(s)	197, 209, 266, 343, 1318, 1578
HpyF3I	CTNAG	6 cut(s)	143, 315, 913, 1214, 1583, 1645
HpySE526I	ACGT	1 cut(s)	606
Hsp92I	GRCGYC	3 cut(s)	35, 900, 1467
Hsp92II	CATG	6 cut(s)	308, 805, 1033, 1354, 1406, 1694
HspAI	GCGC	2 cut(s)	165, 1467
KasI	GGCGCC	1 cut(s)	1466
KpnI	GGTACC	1 cut(s)	801
KroI	GCCGGC	1 cut(s)	7
KroNI	GCCGGC	1 cut(s)	9
Ksp22I	TGATCA	1 cut(s)	835
Kzo9I	GATC	9 cut(s)	57, 129, 463, 524, 546, 611, 835, 1486, 1601
LmnI	GCTCC	7 cut(s)	221, 229, 1117, 1184, 1192, 1543, 1631
LweI	GCATC	2 cut(s)	427, 1439
MaeI	CTAG	5 cut(s)	261, 357, 642, 1106, 1425
MaeII	ACGT	1 cut(s)	606
MaeIII	GTNAC	4 cut(s)	1193, 1415, 1511, 1543
MalI	GATC	9 cut(s)	59, 131, 465, 526, 548, 613, 837, 1488, 1603
MbiI	CCGCTC	1 cut(s)	1112
MboI	GATC	9 cut(s)	57, 129, 463, 524, 546, 611, 835, 1486, 1601
MboII	GAAGA	6 cut(s)	85, 191, 519, 613, 1081, 1356
MfeI	CAATTG	1 cut(s)	1176
MflI	RGATCY	2 cut(s)	524, 611
MhlI	GDGCHC	5 cut(s)	144, 226, 1078, 1189, 1540
MlsI	TGGCCA	1 cut(s)	1443
MluCI	AATT	3 cut(s)	566, 884, 1176
MluNI	TGGCCA	1 cut(s)	1443
Mly113I	GGCGCC	1 cut(s)	1467
MmeI	TCCRAC	4 cut(s)	251, 362, 441, 1524
Mox20I	TGGCCA	1 cut(s)	1443
Mph1103I	ATGCAT	1 cut(s)	333
MreI	CGCCGGCG	1 cut(s)	7
MroNI	GCCGGC	1 cut(s)	7
MroXI	GAANNNNTTC	1 cut(s)	1234
MscI	TGGCCA	1 cut(s)	1443
MseI	TTAA	1 cut(s)	252
MslI	CAYNNNNRTG	2 cut(s)	1383, 1452
Msp20I	TGGCCA	1 cut(s)	1443
MspA1I	CMGCKG	2 cut(s)	1084, 1280
MspI	CCGG	6 cut(s)	8, 393, 497, 571, 1191, 1541
MspR9I	CCNGG	6 cut(s)	572, 616, 1116, 1158, 1191, 1287
MunI	CAATTG	1 cut(s)	1176
MvaI	CCWGG	4 cut(s)	616, 1116, 1158, 1287
MwoI	GCNNNNNNNGC	6 cut(s)	197, 209, 266, 343, 1318, 1578
NaeI	GCCGGC	1 cut(s)	9
NarI	GGCGCC	1 cut(s)	1467
NciI	CCSGG	2 cut(s)	572, 1191
NdeII	GATC	9 cut(s)	57, 129, 463, 524, 546, 611, 835, 1486, 1601
NgoMIV	GCCGGC	1 cut(s)	7
NheI	GCTAGC	1 cut(s)	260
NlaIII	CATG	6 cut(s)	308, 805, 1033, 1354, 1406, 1694
NlaIV	GGNNCC	7 cut(s)	21, 84, 149, 397, 799, 1284, 1468
NmeAIII	GCCGAG	3 cut(s)	59, 163, 680
NmuCI	GTSAC	2 cut(s)	1193, 1543
NsiI	ATGCAT	1 cut(s)	333
PcsI	WCGNNNNNNNCGW	3 cut(s)	38, 117, 690
PdiI	GCCGGC	1 cut(s)	9
PdmI	GAANNNNTTC	1 cut(s)	1234
PfeI	GAWTC	4 cut(s)	352, 493, 805, 1218
PflFI	GACNNNGTC	1 cut(s)	34
PfoI	TCCNGGA	2 cut(s)	570, 1156
PluTI	GGCGCC	1 cut(s)	1470
PpuMI	RGGWCCY	1 cut(s)	147
Psp124BI	GAGCTC	3 cut(s)	144, 226, 1189
Psp5II	RGGWCCY	1 cut(s)	147
Psp6I	CCWGG	4 cut(s)	614, 1114, 1156, 1285
PspEI	GGTNACC	1 cut(s)	1193
PspGI	CCWGG	4 cut(s)	614, 1114, 1156, 1285
PspN4I	GGNNCC	7 cut(s)	21, 84, 149, 397, 799, 1284, 1468
PspPI	GGNCC	4 cut(s)	82, 147, 1118, 1282
PspPPI	RGGWCCY	1 cut(s)	147
PsrI	GAACNNNNNNTAC	2 cut(s)	973, 1005
PstNI	CAGNNNCTG	1 cut(s)	615
PsuI	RGATCY	2 cut(s)	524, 611
PsyI	GACNNNGTC	1 cut(s)	34
PvuII	CAGCTG	1 cut(s)	1084
RsaI	GTAC	4 cut(s)	313, 799, 1308, 1482
RsaNI	GTAC	4 cut(s)	312, 798, 1307, 1481
RseI	CAYNNNNRTG	2 cut(s)	1383, 1452
SacI	GAGCTC	3 cut(s)	144, 226, 1189
SaqAI	TTAA	1 cut(s)	252
Sau3AI	GATC	9 cut(s)	57, 129, 463, 524, 546, 611, 835, 1486, 1601
Sau96I	GGNCC	4 cut(s)	82, 147, 1118, 1282
ScrFI	CCNGG	6 cut(s)	572, 616, 1116, 1158, 1191, 1287
SduI	GDGCHC	5 cut(s)	144, 226, 1078, 1189, 1540
SfaNI	GCATC	2 cut(s)	427, 1439
SfcI	CTRYAG	1 cut(s)	715
SfoI	GGCGCC	1 cut(s)	1468
SgrAI	CRCCGGYG	1 cut(s)	7
SinI	GGWCC	1 cut(s)	147
SmiMI	CAYNNNNRTG	2 cut(s)	1383, 1452
SmlI	CTYRAG	3 cut(s)	338, 995, 1011
SmoI	CTYRAG	3 cut(s)	338, 995, 1011
SpeI	ACTAGT	1 cut(s)	1424
Sse9I	AATT	3 cut(s)	566, 884, 1176
SspDI	GGCGCC	1 cut(s)	1466
SspMI	CTAG	5 cut(s)	261, 357, 642, 1106, 1425
SstI	GAGCTC	3 cut(s)	144, 226, 1189
StyD4I	CCNGG	6 cut(s)	570, 614, 1114, 1156, 1189, 1285
StyI	CCWWGG	2 cut(s)	192, 356
TaaI	ACNGT	2 cut(s)	1073, 1511
TaiI	ACGT	1 cut(s)	609
TaqI	TCGA	7 cut(s)	41, 60, 96, 466, 684, 844, 891
TaqII	GACCGA	2 cut(s)	882, 1388
TasI	AATT	3 cut(s)	566, 884, 1176
TatI	WGTACW	2 cut(s)	311, 1480
TauI	GCSGC	5 cut(s)	7, 693, 939, 1112, 1283
TfiI	GAWTC	4 cut(s)	352, 493, 805, 1218
Tru1I	TTAA	1 cut(s)	252
Tru9I	TTAA	1 cut(s)	252
TseFI	GTSAC	2 cut(s)	1193, 1543
Tsp45I	GTSAC	2 cut(s)	1193, 1543
TspDTI	ATGAA	6 cut(s)	91, 321, 519, 818, 877, 1046
TspGWI	ACGGA	1 cut(s)	29
Tth111I	GACNNNGTC	1 cut(s)	34
VpaK11BI	GGWCC	1 cut(s)	147
XcmI	CCANNNNNNNNNTGG	1 cut(s)	745
XmaJI	CCTAGG	1 cut(s)	356
XmiI	GTMKAC	1 cut(s)	972
XmnI	GAANNNNTTC	1 cut(s)	1234
XspI	CTAG	5 cut(s)	261, 357, 642, 1106, 1425
Zsp2I	ATGCAT	1 cut(s)	333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.