Rh4CG186500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
40214215 .. 40230367
16153 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG186500.1

Sequence Viewer

Length: 237 bp
ATGAGATGGACTGGAACATGGAGAAGAGAACATTGTTTCGTAGATAGACTGGAACATGGAGAAAAGAACAAGGGGCATGCTGATGTTAAAGAGGAAGGAGCTCAGCTTTGCAGAGATGACCATCTTGGCTATTATGGATTAAAGCAGTCGTTCCACCTGCCGGAGTTGAAGACTAAGAGGATCTGGCTGGTTTTGAAATCTTTTGGGGGTGATTACAAGTGCGTATCAACTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

78

Amino Acids

9.19

Weight (kDa)

8.86

Isoelectric Point (pI)

29.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 165
Acc36I ACCTGC 1 cut(s) 165
AclWI GGATC 1 cut(s) 188
AfiI CCNNNNNNNGG 1 cut(s) 160
AgsI TTSAA 2 cut(s) 169, 196
AluBI AGCT 2 cut(s) 101, 106
AluI AGCT 2 cut(s) 101, 106
Alw21I GWGCWC 1 cut(s) 103
AlwI GGATC 1 cut(s) 188
AsuHPI GGTGA 1 cut(s) 221
BanII GRGCYC 1 cut(s) 103
BbsI GAAGAC 1 cut(s) 176
Bbv12I GWGCWC 1 cut(s) 103
BccI CCATC 1 cut(s) 129
BfuAI ACCTGC 1 cut(s) 165
BlpI GCTNAGC 1 cut(s) 102
BpiI GAAGAC 1 cut(s) 176
Bpu1102I GCTNAGC 1 cut(s) 102
BsaBI GATNNNNATC 1 cut(s) 120
Bsc4I CCNNNNNNNGG 1 cut(s) 160
Bse1I ACTGG 2 cut(s) 16, 54
Bse8I GATNNNNATC 1 cut(s) 120
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 1 cut(s) 160
BseMII CTCAG 1 cut(s) 116
BseNI ACTGG 2 cut(s) 16, 54
BsiHKAI GWGCWC 1 cut(s) 103
BsiSI CCGG 1 cut(s) 161
BslI CCNNNNNNNGG 1 cut(s) 160
Bsp1286I GDGCHC 1 cut(s) 103
Bsp143I GATC 1 cut(s) 180
Bsp1720I GCTNAGC 1 cut(s) 102
BspCNI CTCAG 1 cut(s) 115
BspMI ACCTGC 1 cut(s) 165
BspPI GGATC 1 cut(s) 188
BsrI ACTGG 2 cut(s) 16, 54
BssMI GATC 1 cut(s) 180
Bst4CI ACNGT 1 cut(s) 232
Bst6I CTCTTC 1 cut(s) 19
BstC8I GCNNGC 1 cut(s) 78
BstDEI CTNAG 2 cut(s) 102, 174
BstKTI GATC 1 cut(s) 183
BstMBI GATC 1 cut(s) 180
BstNSI RCATGY 1 cut(s) 80
BstV2I GAAGAC 1 cut(s) 176
BstX2I RGATCY 1 cut(s) 180
BstYI RGATCY 1 cut(s) 180
BveI ACCTGC 1 cut(s) 165
Cac8I GCNNGC 1 cut(s) 78
CviAII CATG 3 cut(s) 18, 56, 77
CviJI RGCY 4 cut(s) 101, 106, 129, 187
CviKI_1 RGCY 4 cut(s) 101, 106, 129, 187
DdeI CTNAG 2 cut(s) 102, 174
DpnI GATC 1 cut(s) 182
DpnII GATC 1 cut(s) 180
Eam1104I CTCTTC 1 cut(s) 19
EarI CTCTTC 1 cut(s) 19
Ecl136II GAGCTC 1 cut(s) 101
Eco24I GRGCYC 1 cut(s) 103
Eco53kI GAGCTC 1 cut(s) 101
EcoICRI GAGCTC 1 cut(s) 101
EcoT38I GRGCYC 1 cut(s) 103
FaeI CATG 3 cut(s) 21, 59, 80
FaiI YATR 4 cut(s) 19, 57, 78, 135
FatI CATG 3 cut(s) 17, 55, 76
FriOI GRGCYC 1 cut(s) 103
HapII CCGG 1 cut(s) 161
Hin1II CATG 3 cut(s) 21, 59, 80
HpaII CCGG 1 cut(s) 161
HphI GGTGA 1 cut(s) 221
HpyAV CCTTC 1 cut(s) 89
HpyCH4III ACNGT 1 cut(s) 232
HpyCH4V TGCA 1 cut(s) 111
HpyF3I CTNAG 2 cut(s) 102, 174
Hsp92II CATG 3 cut(s) 21, 59, 80
Kzo9I GATC 1 cut(s) 180
LmnI GCTCC 1 cut(s) 98
LpnPI CCDG 5 cut(s) 35, 169, 170, 173, 174
MalI GATC 1 cut(s) 182
MboI GATC 1 cut(s) 180
MboII GAAGA 2 cut(s) 36, 181
MflI RGATCY 1 cut(s) 180
MhlI GDGCHC 1 cut(s) 103
MnlI CCTC 2 cut(s) 85, 171
MseI TTAA 2 cut(s) 87, 140
MslI CAYNNNNRTG 1 cut(s) 81
MspI CCGG 1 cut(s) 161
NdeII GATC 1 cut(s) 180
NlaIII CATG 3 cut(s) 21, 59, 80
NspI RCATGY 1 cut(s) 80
PaeI GCATGC 1 cut(s) 80
PaqCI CACCTGC 1 cut(s) 165
Psp124BI GAGCTC 1 cut(s) 103
PsuI RGATCY 1 cut(s) 180
RseI CAYNNNNRTG 1 cut(s) 81
SacI GAGCTC 1 cut(s) 103
SaqAI TTAA 2 cut(s) 87, 140
Sau3AI GATC 1 cut(s) 180
SduI GDGCHC 1 cut(s) 103
SetI ASST 3 cut(s) 103, 108, 159
SmiMI CAYNNNNRTG 1 cut(s) 81
SphI GCATGC 1 cut(s) 80
SstI GAGCTC 1 cut(s) 103
TaaI ACNGT 1 cut(s) 232
Tru1I TTAA 2 cut(s) 87, 140
Tru9I TTAA 2 cut(s) 87, 140
XceI RCATGY 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.