Rh4DG054200

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
8485133 .. 8486575
1443 bp
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UTR
Exon/CDS
Intron
Rh4DG054200.1

Sequence Viewer

Length: 315 bp
ATGTACAACAACAGATTTATTCCGTGCCAATCGTCGTCCAGGCTCCACCAGTTTGGGCTGAACGACAAGGCGTCACCAGTGAAATATAGTGGATTCAGAGAAGACCACAAGACTTCCGCTTCTCATCGCCGCTCGCCGTCGACCTGCCACAGCGTCGTTTCGGCTTCGTGTCGCATTATCGGTGTTTCTCGGCTGAAACTGCGAAGATGCTTCAAGGCTTTCCAAAGAGCAAAACATGAGCATGAGGCATTAAAGAGGCAGCTTGAAACTTATTTCCAGTTGAGAAGACAAGCTGGAATGGCACAAAGGTCTTGA

Protein Analysis

104

Amino Acids

12.1

Weight (kDa)

10.93

Isoelectric Point (pI)

74.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 152
AccBSI CCGCTC 1 cut(s) 132
AccI GTMKAC 1 cut(s) 140
AciI CCGC 2 cut(s) 117, 130
AcyI GRCGYC 1 cut(s) 71
AfaI GTAC 1 cut(s) 5
AgsI TTSAA 2 cut(s) 214, 266
AhdI GACNNNNNGTC 1 cut(s) 70
AjnI CCWGG 1 cut(s) 38
AluBI AGCT 2 cut(s) 262, 293
AluI AGCT 2 cut(s) 262, 293
ApeKI GCWGC 1 cut(s) 259
AsuHPI GGTGA 1 cut(s) 66
BbsI GAAGAC 2 cut(s) 108, 292
BbvI GCAGC 1 cut(s) 271
BceAI ACGGC 1 cut(s) 121
BciT130I CCWGG 1 cut(s) 40
BfuAI ACCTGC 1 cut(s) 152
BisI GCNGC 2 cut(s) 130, 260
BlsI GCNGC 2 cut(s) 131, 261
Bme1390I CCNGG 1 cut(s) 40
BmeRI GACNNNNNGTC 1 cut(s) 70
BmiI GGNNCC 1 cut(s) 44
BmrFI CCNGG 1 cut(s) 40
BmsI GCATC 1 cut(s) 197
BpiI GAAGAC 2 cut(s) 108, 292
BsaHI GRCGYC 1 cut(s) 71
Bse1I ACTGG 3 cut(s) 49, 77, 277
BseBI CCWGG 1 cut(s) 40
BseNI ACTGG 3 cut(s) 49, 77, 277
BseXI GCAGC 1 cut(s) 271
Bsp1407I TGTACA 1 cut(s) 3
BspACI CCGC 2 cut(s) 117, 130
BspLI GGNNCC 1 cut(s) 44
BspMI ACCTGC 1 cut(s) 152
BsrBI CCGCTC 1 cut(s) 132
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 3 cut(s) 49, 77, 277
BssNI GRCGYC 1 cut(s) 71
Bst2UI CCWGG 1 cut(s) 40
BstACI GRCGYC 1 cut(s) 71
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 1 cut(s) 134
BstMWI GCNNNNNNNGC 2 cut(s) 199, 299
BstNI CCWGG 1 cut(s) 40
BstSCI CCNGG 1 cut(s) 38
BstV1I GCAGC 1 cut(s) 271
BstV2I GAAGAC 2 cut(s) 108, 292
BstXI CCANNNNNNTGG 1 cut(s) 53
BtgZI GCGATG 1 cut(s) 110
BtsIMutI CAGTG 1 cut(s) 84
BveI ACCTGC 1 cut(s) 152
Cac8I GCNNGC 1 cut(s) 134
CseI GACGC 2 cut(s) 60, 142
Csp6I GTAC 1 cut(s) 4
CviAII CATG 2 cut(s) 236, 242
CviJI RGCY 7 cut(s) 43, 58, 164, 193, 218, 262, 293
CviKI_1 RGCY 7 cut(s) 43, 58, 164, 193, 218, 262, 293
CviQI GTAC 1 cut(s) 4
DriI GACNNNNNGTC 1 cut(s) 70
Eam1105I GACNNNNNGTC 1 cut(s) 70
EcoRII CCWGG 1 cut(s) 38
FaeI CATG 2 cut(s) 239, 245
FaiI YATR 3 cut(s) 87, 237, 243
FatI CATG 2 cut(s) 235, 241
FblI GTMKAC 1 cut(s) 140
Fnu4HI GCNGC 2 cut(s) 130, 260
Fsp4HI GCNGC 2 cut(s) 130, 260
GluI GCNGC 2 cut(s) 130, 260
HgaI GACGC 2 cut(s) 60, 142
Hin1I GRCGYC 1 cut(s) 71
Hin1II CATG 2 cut(s) 239, 245
HincII GTYRAC 1 cut(s) 141
HindII GTYRAC 1 cut(s) 141
HinfI GANTC 1 cut(s) 93
HphI GGTGA 1 cut(s) 66
Hpy166II GTNNAC 1 cut(s) 141
Hpy188I TCNGA 1 cut(s) 98
Hpy188III TCNNGA 1 cut(s) 312
Hpy8I GTNNAC 1 cut(s) 141
Hpy99I CGWCG 3 cut(s) 37, 142, 158
HpyF10VI GCNNNNNNNGC 2 cut(s) 199, 299
Hsp92I GRCGYC 1 cut(s) 71
Hsp92II CATG 2 cut(s) 239, 245
LmnI GCTCC 1 cut(s) 48
LpnPI CCDG 7 cut(s) 25, 52, 62, 90, 157, 279, 290
Lsp1109I GCAGC 1 cut(s) 271
LweI GCATC 1 cut(s) 197
MaeIII GTNAC 1 cut(s) 72
MbiI CCGCTC 1 cut(s) 132
MboII GAAGA 3 cut(s) 113, 216, 297
MnlI CCTC 2 cut(s) 238, 249
MseI TTAA 1 cut(s) 251
MslI CAYNNNNRTG 1 cut(s) 240
MspR9I CCNGG 1 cut(s) 40
MvaI CCWGG 1 cut(s) 40
MwoI GCNNNNNNNGC 2 cut(s) 199, 299
NlaIII CATG 2 cut(s) 239, 245
NlaIV GGNNCC 1 cut(s) 44
NmeAIII GCCGAG 1 cut(s) 169
NmuCI GTSAC 1 cut(s) 72
PfeI GAWTC 1 cut(s) 93
PkrI GCNGC 2 cut(s) 131, 261
Psp6I CCWGG 1 cut(s) 38
PspGI CCWGG 1 cut(s) 38
PspN4I GGNNCC 1 cut(s) 44
RsaI GTAC 1 cut(s) 5
RsaNI GTAC 1 cut(s) 4
RseI CAYNNNNRTG 1 cut(s) 240
SalI GTCGAC 1 cut(s) 139
SaqAI TTAA 1 cut(s) 251
SatI GCNGC 2 cut(s) 130, 260
ScrFI CCNGG 1 cut(s) 40
SetI ASST 4 cut(s) 146, 264, 295, 311
SfaNI GCATC 1 cut(s) 197
SmiMI CAYNNNNRTG 1 cut(s) 240
SsiI CCGC 2 cut(s) 117, 130
StyD4I CCNGG 1 cut(s) 38
TaqI TCGA 1 cut(s) 140
TatI WGTACW 1 cut(s) 3
TauI GCSGC 1 cut(s) 132
TfiI GAWTC 1 cut(s) 93
Tru1I TTAA 1 cut(s) 251
Tru9I TTAA 1 cut(s) 251
TscAI CASTG 1 cut(s) 84
TseFI GTSAC 1 cut(s) 72
TseI GCWGC 1 cut(s) 259
Tsp45I GTSAC 1 cut(s) 72
TspGWI ACGGA 1 cut(s) 12
TspRI CASTG 1 cut(s) 84
XmiI GTMKAC 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.