Rh6AG242000

histidine-containing phosphotransfer protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
42937093 .. 42938285
1193 bp
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UTR
Exon/CDS
Intron
Rh6AG242000.1

Sequence Viewer

Length: 168 bp
ATGGCGGTGAAGCGCGGGCTCTACCTGAATCGAGCCATTGGATCTCATTCCTTAATGCGATGCTTCAAGGCTTTCCAAAGAGCAAAACATGAGCATGAGGCATTAAAGAGGCAGCTTGAAACTTATTTCCAGTTGAGAAGACAAGCTGGAATGGCACAAAGGTCTTGA

Protein Analysis

55

Amino Acids

6.52

Weight (kDa)

11.29

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 15
AciI CCGC 2 cut(s) 5, 15
AclWI GGATC 1 cut(s) 49
AgsI TTSAA 2 cut(s) 67, 119
AluBI AGCT 2 cut(s) 115, 146
AluI AGCT 2 cut(s) 115, 146
AlwI GGATC 1 cut(s) 49
ApeKI GCWGC 1 cut(s) 112
AspLEI GCGC 1 cut(s) 15
AsuHPI GGTGA 1 cut(s) 19
BanII GRGCYC 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 145
BbvI GCAGC 1 cut(s) 124
BisI GCNGC 1 cut(s) 113
BlsI GCNGC 1 cut(s) 114
BmsI GCATC 1 cut(s) 50
BpiI GAAGAC 1 cut(s) 145
Bse1I ACTGG 1 cut(s) 130
BseNI ACTGG 1 cut(s) 130
BseXI GCAGC 1 cut(s) 124
Bsh1236I CGCG 1 cut(s) 15
Bsp1286I GDGCHC 1 cut(s) 21
Bsp143I GATC 1 cut(s) 41
BspACI CCGC 2 cut(s) 5, 15
BspFNI CGCG 1 cut(s) 15
BspPI GGATC 1 cut(s) 49
BsrI ACTGG 1 cut(s) 130
BssMI GATC 1 cut(s) 41
BstC8I GCNNGC 1 cut(s) 17
BstFNI CGCG 1 cut(s) 15
BstHHI GCGC 1 cut(s) 15
BstKTI GATC 1 cut(s) 44
BstMBI GATC 1 cut(s) 41
BstMWI GCNNNNNNNGC 1 cut(s) 152
BstUI CGCG 1 cut(s) 15
BstV1I GCAGC 1 cut(s) 124
BstV2I GAAGAC 1 cut(s) 145
BstX2I RGATCY 1 cut(s) 41
BstYI RGATCY 1 cut(s) 41
BtgZI GCGATG 1 cut(s) 73
Cac8I GCNNGC 1 cut(s) 17
CfoI GCGC 1 cut(s) 15
CviAII CATG 2 cut(s) 89, 95
CviJI RGCY 5 cut(s) 19, 35, 71, 115, 146
CviKI_1 RGCY 5 cut(s) 19, 35, 71, 115, 146
DpnI GATC 1 cut(s) 43
DpnII GATC 1 cut(s) 41
Eco24I GRGCYC 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 21
FaeI CATG 2 cut(s) 92, 98
FaiI YATR 2 cut(s) 90, 96
FatI CATG 2 cut(s) 88, 94
FauI CCCGC 1 cut(s) 8
Fnu4HI GCNGC 1 cut(s) 113
FriOI GRGCYC 1 cut(s) 21
Fsp4HI GCNGC 1 cut(s) 113
GlaI GCGC 1 cut(s) 14
GluI GCNGC 1 cut(s) 113
HhaI GCGC 1 cut(s) 15
Hin1II CATG 2 cut(s) 92, 98
Hin6I GCGC 1 cut(s) 13
HinP1I GCGC 1 cut(s) 13
HinfI GANTC 1 cut(s) 28
HphI GGTGA 1 cut(s) 19
Hpy188III TCNNGA 1 cut(s) 165
HpyF10VI GCNNNNNNNGC 1 cut(s) 152
Hsp92II CATG 2 cut(s) 92, 98
HspAI GCGC 1 cut(s) 13
Kzo9I GATC 1 cut(s) 41
LpnPI CCDG 3 cut(s) 38, 132, 143
Lsp1109I GCAGC 1 cut(s) 124
LweI GCATC 1 cut(s) 50
MalI GATC 1 cut(s) 43
MboI GATC 1 cut(s) 41
MboII GAAGA 1 cut(s) 150
MflI RGATCY 1 cut(s) 41
MhlI GDGCHC 1 cut(s) 21
MnlI CCTC 2 cut(s) 91, 102
MseI TTAA 2 cut(s) 53, 104
MslI CAYNNNNRTG 1 cut(s) 93
MvnI CGCG 1 cut(s) 15
MwoI GCNNNNNNNGC 1 cut(s) 152
NdeII GATC 1 cut(s) 41
NlaIII CATG 2 cut(s) 92, 98
PfeI GAWTC 1 cut(s) 28
PkrI GCNGC 1 cut(s) 114
PsuI RGATCY 1 cut(s) 41
RseI CAYNNNNRTG 1 cut(s) 93
SaqAI TTAA 2 cut(s) 53, 104
SatI GCNGC 1 cut(s) 113
Sau3AI GATC 1 cut(s) 41
SduI GDGCHC 1 cut(s) 21
SetI ASST 4 cut(s) 27, 117, 148, 164
SfaNI GCATC 1 cut(s) 50
SmiMI CAYNNNNRTG 1 cut(s) 93
SsiI CCGC 2 cut(s) 5, 15
TaqI TCGA 1 cut(s) 31
TfiI GAWTC 1 cut(s) 28
Tru1I TTAA 2 cut(s) 53, 104
Tru9I TTAA 2 cut(s) 53, 104
TseI GCWGC 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.