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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g41860 FvH4_5g17340 |
| rosa_chinensis | RchiOBHm_Chr4g0389261 RchiOBHm_Chr5g0075701 |
| rosa_multiflora | Rmu_sc0002398.1_g000004 Rmu_sc0003175.1_g000007 Rmu_sc0007018.1_g000001 Rmu_sc0012670.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00133960 |
| rosa_rugosa | Rorug03G0366900.1 Rorug04G0064600 Rorug05G0442200 |
| rosa_samantha | Rh5AG498600 Rh5AG498700 Rh5AG501200 Rh5BG519800 Rh5CG543800 Rh5DG529700 |
| rosa_wichuraiana | Rw5G046280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 163 |
| AciI | CCGC | 1 cut(s) | 142 |
| AfaI | GTAC | 1 cut(s) | 64 |
| AluBI | AGCT | 3 cut(s) | 130, 178, 218 |
| AluI | AGCT | 3 cut(s) | 130, 178, 218 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 130 |
| ApeKI | GCWGC | 1 cut(s) | 130 |
| AsuC2I | CCSGG | 1 cut(s) | 168 |
| AsuII | TTCGAA | 1 cut(s) | 80 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 54, 87 |
| BanI | GGYRCC | 1 cut(s) | 163 |
| BbvI | GCAGC | 1 cut(s) | 117 |
| BclI | TGATCA | 2 cut(s) | 72, 99 |
| BcnI | CCSGG | 1 cut(s) | 168 |
| BisI | GCNGC | 2 cut(s) | 131, 142 |
| BlsI | GCNGC | 2 cut(s) | 132, 143 |
| Bme1390I | CCNGG | 1 cut(s) | 168 |
| BmiI | GGNNCC | 1 cut(s) | 165 |
| BmrFI | CCNGG | 1 cut(s) | 168 |
| Bpu14I | TTCGAA | 1 cut(s) | 80 |
| BpuEI | CTTGAG | 1 cut(s) | 176 |
| BpuMI | CCSGG | 1 cut(s) | 168 |
| BsaJI | CCNNGG | 1 cut(s) | 167 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 30, 60, 97, 127 |
| BseDI | CCNNGG | 1 cut(s) | 167 |
| BseRI | GAGGAG | 1 cut(s) | 38 |
| BseXI | GCAGC | 1 cut(s) | 117 |
| BshNI | GGYRCC | 1 cut(s) | 163 |
| BsiSI | CCGG | 1 cut(s) | 167 |
| Bsp119I | TTCGAA | 1 cut(s) | 80 |
| Bsp143I | GATC | 2 cut(s) | 72, 99 |
| BspACI | CCGC | 1 cut(s) | 142 |
| BspLI | GGNNCC | 1 cut(s) | 165 |
| BspT104I | TTCGAA | 1 cut(s) | 80 |
| BspT107I | GGYRCC | 1 cut(s) | 163 |
| BssECI | CCNNGG | 1 cut(s) | 167 |
| BssMI | GATC | 2 cut(s) | 72, 99 |
| Bst4CI | ACNGT | 1 cut(s) | 67 |
| Bst6I | CTCTTC | 1 cut(s) | 47 |
| BstBI | TTCGAA | 1 cut(s) | 80 |
| BstKTI | GATC | 2 cut(s) | 75, 102 |
| BstMBI | GATC | 2 cut(s) | 72, 99 |
| BstSCI | CCNGG | 1 cut(s) | 166 |
| BstV1I | GCAGC | 1 cut(s) | 117 |
| CaiI | CAGNNNCTG | 1 cut(s) | 130 |
| Csp6I | GTAC | 1 cut(s) | 63 |
| CviJI | RGCY | 6 cut(s) | 5, 130, 141, 154, 178, 218 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 130, 141, 154, 178, 218 |
| CviQI | GTAC | 1 cut(s) | 63 |
| DpnI | GATC | 2 cut(s) | 74, 101 |
| DpnII | GATC | 2 cut(s) | 72, 99 |
| Eam1104I | CTCTTC | 1 cut(s) | 47 |
| EarI | CTCTTC | 1 cut(s) | 47 |
| FaiI | YATR | 4 cut(s) | 15, 150, 174, 199 |
| FbaI | TGATCA | 2 cut(s) | 72, 99 |
| Fnu4HI | GCNGC | 2 cut(s) | 131, 142 |
| Fsp4HI | GCNGC | 2 cut(s) | 131, 142 |
| GluI | GCNGC | 2 cut(s) | 131, 142 |
| HapII | CCGG | 1 cut(s) | 167 |
| HinfI | GANTC | 2 cut(s) | 86, 188 |
| HpaII | CCGG | 1 cut(s) | 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 103, 116 |
| HpyAV | CCTTC | 2 cut(s) | 76, 154 |
| HpyCH4III | ACNGT | 1 cut(s) | 67 |
| Ksp22I | TGATCA | 2 cut(s) | 72, 99 |
| Kzo9I | GATC | 2 cut(s) | 72, 99 |
| LpnPI | CCDG | 2 cut(s) | 88, 180 |
| Lsp1109I | GCAGC | 1 cut(s) | 117 |
| MaeIII | GTNAC | 1 cut(s) | 205 |
| MalI | GATC | 2 cut(s) | 74, 101 |
| MboI | GATC | 2 cut(s) | 72, 99 |
| MboII | GAAGA | 1 cut(s) | 34 |
| MlyI | GAGTC | 2 cut(s) | 80, 182 |
| MnlI | CCTC | 2 cut(s) | 56, 59 |
| MseI | TTAA | 1 cut(s) | 30 |
| MspI | CCGG | 1 cut(s) | 167 |
| MspR9I | CCNGG | 1 cut(s) | 168 |
| NciI | CCSGG | 1 cut(s) | 168 |
| NdeII | GATC | 2 cut(s) | 72, 99 |
| NlaIV | GGNNCC | 1 cut(s) | 165 |
| NspV | TTCGAA | 1 cut(s) | 80 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 86 |
| PkrI | GCNGC | 2 cut(s) | 132, 143 |
| PleI | GAGTC | 2 cut(s) | 80, 182 |
| PpsI | GAGTC | 2 cut(s) | 80, 182 |
| PspN4I | GGNNCC | 1 cut(s) | 165 |
| PstNI | CAGNNNCTG | 1 cut(s) | 130 |
| RsaI | GTAC | 1 cut(s) | 64 |
| RsaNI | GTAC | 1 cut(s) | 63 |
| SaqAI | TTAA | 1 cut(s) | 30 |
| SatI | GCNGC | 2 cut(s) | 131, 142 |
| Sau3AI | GATC | 2 cut(s) | 72, 99 |
| SchI | GAGTC | 2 cut(s) | 80, 182 |
| ScrFI | CCNGG | 1 cut(s) | 168 |
| SetI | ASST | 5 cut(s) | 132, 165, 180, 220, 224 |
| SfuI | TTCGAA | 1 cut(s) | 80 |
| SgeI | CNNG | 8 cut(s) | 18, 100, 115, 128, 146, 167, 179, 180 |
| SmlI | CTYRAG | 1 cut(s) | 155 |
| SmoI | CTYRAG | 1 cut(s) | 155 |
| SsiI | CCGC | 1 cut(s) | 142 |
| StyD4I | CCNGG | 1 cut(s) | 166 |
| TaaI | ACNGT | 1 cut(s) | 67 |
| TaqI | TCGA | 2 cut(s) | 80, 89 |
| TauI | GCSGC | 1 cut(s) | 144 |
| Tru1I | TTAA | 1 cut(s) | 30 |
| Tru9I | TTAA | 1 cut(s) | 30 |
| TseI | GCWGC | 1 cut(s) | 130 |