Rh5CG268600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
28849456 .. 28853568
4113 bp
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UTR
Exon/CDS
Intron
Rh5CG268600.1

Sequence Viewer

Length: 201 bp
ATGCCTTTACGAAATCCACTAGAAGTAGACATTTTGTTTGAGACCAAAGACCCAGTTCAATTTACTTCACAAACTGATACAGGGTTGGAAAATGGGATGAGGCGATTGGGACATGCCTCTTATTCGAAGAAGAAGTTGTCCCTGTTGTTCATGAAGAAAAAGGACCATCAGAAGCAAACTCTTTTGCTGGCAAATGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.57

Weight (kDa)

9.7

Isoelectric Point (pI)

30.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 27
AgsI TTSAA 1 cut(s) 59
Alw26I GTCTC 1 cut(s) 35
ArsI GACNNNNNNTTYG 2 cut(s) 20, 52
AspS9I GGNCC 1 cut(s) 163
AsuII TTCGAA 1 cut(s) 125
AvaII GGWCC 1 cut(s) 163
BccI CCATC 1 cut(s) 174
BcoDI GTCTC 1 cut(s) 35
BfaI CTAG 1 cut(s) 20
Bme18I GGWCC 1 cut(s) 163
BmgT120I GGNCC 1 cut(s) 163
BmrI ACTGGG 1 cut(s) 47
BmuI ACTGGG 1 cut(s) 47
Bpu14I TTCGAA 1 cut(s) 125
BsaI GGTCTC 1 cut(s) 35
Bse1I ACTGG 1 cut(s) 53
BseGI GGATG 1 cut(s) 102
BseNI ACTGG 1 cut(s) 53
BslFI GGGAC 2 cut(s) 123, 124
BsmAI GTCTC 1 cut(s) 35
BsmFI GGGAC 2 cut(s) 123, 124
Bso31I GGTCTC 1 cut(s) 35
Bsp119I TTCGAA 1 cut(s) 125
BspHI TCATGA 1 cut(s) 150
BspT104I TTCGAA 1 cut(s) 125
BspTNI GGTCTC 1 cut(s) 35
BsrI ACTGG 1 cut(s) 53
BstBI TTCGAA 1 cut(s) 125
BstC8I GCNNGC 1 cut(s) 189
BstF5I GGATG 1 cut(s) 102
BstMAI GTCTC 1 cut(s) 35
BstNSI RCATGY 1 cut(s) 116
BtsCI GGATG 1 cut(s) 102
Cac8I GCNNGC 1 cut(s) 189
CciI TCATGA 1 cut(s) 150
Cfr13I GGNCC 1 cut(s) 163
CviAII CATG 2 cut(s) 113, 151
Eco31I GGTCTC 1 cut(s) 35
Eco47I GGWCC 1 cut(s) 163
EcoT22I ATGCAT 1 cut(s) 199
FaeI CATG 2 cut(s) 116, 154
FaiI YATR 3 cut(s) 114, 152, 199
FaqI GGGAC 2 cut(s) 123, 124
FatI CATG 2 cut(s) 112, 150
FblI GTMKAC 1 cut(s) 27
FokI GGATG 1 cut(s) 109
FspBI CTAG 1 cut(s) 20
Hin1II CATG 2 cut(s) 116, 154
Hpy166II GTNNAC 1 cut(s) 28
Hpy188I TCNGA 1 cut(s) 171
Hpy188III TCNNGA 1 cut(s) 151
Hpy8I GTNNAC 1 cut(s) 28
HpyCH4V TGCA 1 cut(s) 197
Hsp92II CATG 2 cut(s) 116, 154
LpnPI CCDG 4 cut(s) 66, 66, 155, 173
MaeI CTAG 1 cut(s) 20
MboII GAAGA 3 cut(s) 139, 142, 166
MluCI AATT 1 cut(s) 59
MmeI TCCRAC 1 cut(s) 66
MnlI CCTC 2 cut(s) 93, 127
Mph1103I ATGCAT 1 cut(s) 199
NlaIII CATG 2 cut(s) 116, 154
NsiI ATGCAT 1 cut(s) 199
NspI RCATGY 1 cut(s) 116
NspV TTCGAA 1 cut(s) 125
PagI TCATGA 1 cut(s) 150
PspPI GGNCC 1 cut(s) 163
Sau96I GGNCC 1 cut(s) 163
SfuI TTCGAA 1 cut(s) 125
SgeI CNNG 6 cut(s) 32, 65, 93, 125, 154, 163
SinI GGWCC 1 cut(s) 163
Sse9I AATT 1 cut(s) 59
SspMI CTAG 1 cut(s) 20
TaqI TCGA 1 cut(s) 125
TasI AATT 1 cut(s) 59
TspDTI ATGAA 2 cut(s) 139, 167
VpaK11BI GGWCC 1 cut(s) 163
XceI RCATGY 1 cut(s) 116
XmiI GTMKAC 1 cut(s) 27
XspI CTAG 1 cut(s) 20
Zsp2I ATGCAT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.