Rh6AG054200

CYSTM1 family protein A-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
8001696 .. 8002109
414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG054200.1

Sequence Viewer

Length: 279 bp
ATGAGCTATTACAACCAGCAACAACCCCCAGTTGGTGTTCCTCCTCCTCAAGGTTATCCACCGGAGGGATATGCCAAAGACGCTTATCCTCCTCCGGGATATCCCCCGCAGGGGTATCCCCAGCAGGGATATCCTCCGCCGCAGGGATACCCCCAGCAATACCCTCCTCCCTATGCTCCTCAATACGCTCAGCCTCCCCCTCAACAACAAAACAATAGCGGTGGATTTATGGAAGGCTGGTACGTGGCTCTCTTTCTTTCTCTTTGTATTTGGGTCTGA

Protein Analysis

92

Amino Acids

10.3

Weight (kDa)

4.14

Isoelectric Point (pI)

92.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 107, 137, 140, 219
AfaI GTAC 1 cut(s) 242
AfiI CCNNNNNNNGG 8 cut(s) 32, 50, 65, 95, 110, 111, 125, 143
AluBI AGCT 1 cut(s) 6
AluI AGCT 1 cut(s) 6
AsuC2I CCSGG 1 cut(s) 96
BciVI GTATCC 2 cut(s) 126, 140
BcnI CCSGG 1 cut(s) 96
BfuI GTATCC 2 cut(s) 126, 140
BisI GCNGC 1 cut(s) 140
BlpI GCTNAGC 1 cut(s) 189
BlsI GCNGC 1 cut(s) 141
Bme1390I CCNGG 1 cut(s) 96
BmrFI CCNGG 1 cut(s) 96
BmrI ACTGGG 1 cut(s) 23
BmuI ACTGGG 1 cut(s) 23
Bpu1102I GCTNAGC 1 cut(s) 189
BpuEI CTTGAG 1 cut(s) 33
BpuMI CCSGG 1 cut(s) 96
BsaAI YACGTR 1 cut(s) 244
BsaWI WCCGGW 1 cut(s) 61
Bsc4I CCNNNNNNNGG 8 cut(s) 32, 50, 65, 95, 110, 111, 125, 143
Bse1I ACTGG 1 cut(s) 29
BseLI CCNNNNNNNGG 8 cut(s) 32, 50, 65, 95, 110, 111, 125, 143
BseMII CTCAG 1 cut(s) 203
BseNI ACTGG 1 cut(s) 29
BseRI GAGGAG 5 cut(s) 33, 36, 81, 156, 168
BseYI CCCAGC 2 cut(s) 120, 153
BsiSI CCGG 2 cut(s) 62, 95
BslI CCNNNNNNNGG 8 cut(s) 32, 50, 65, 95, 110, 111, 125, 143
Bsp1720I GCTNAGC 1 cut(s) 189
BspACI CCGC 4 cut(s) 107, 137, 140, 219
BspCNI CTCAG 1 cut(s) 202
BsrI ACTGG 1 cut(s) 29
BstBAI YACGTR 1 cut(s) 244
BstDEI CTNAG 1 cut(s) 189
BstENI CCTNNNNNAGG 1 cut(s) 48
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstSCI CCNGG 1 cut(s) 94
BsuI GTATCC 2 cut(s) 126, 140
CseI GACGC 1 cut(s) 89
Csp6I GTAC 1 cut(s) 241
CspCI CAANNNNNGTGG 2 cut(s) 202, 237
CviJI RGCY 4 cut(s) 6, 193, 237, 248
CviKI_1 RGCY 4 cut(s) 6, 193, 237, 248
CviQI GTAC 1 cut(s) 241
DdeI CTNAG 1 cut(s) 189
EciI GGCGGA 1 cut(s) 126
Eco32I GATATC 2 cut(s) 101, 131
EcoNI CCTNNNNNAGG 1 cut(s) 48
EcoRV GATATC 2 cut(s) 101, 131
FaiI YATR 3 cut(s) 72, 174, 230
FauI CCCGC 1 cut(s) 114
Fnu4HI GCNGC 1 cut(s) 140
Fsp4HI GCNGC 1 cut(s) 140
GluI GCNGC 1 cut(s) 140
GsaI CCCAGC 2 cut(s) 124, 157
HapII CCGG 2 cut(s) 62, 95
HgaI GACGC 1 cut(s) 89
HpaII CCGG 2 cut(s) 62, 95
Hpy188I TCNGA 1 cut(s) 278
HpyAV CCTTC 1 cut(s) 227
HpyCH4IV ACGT 1 cut(s) 243
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 189
HpySE526I ACGT 1 cut(s) 243
LmnI GCTCC 1 cut(s) 181
MaeII ACGT 1 cut(s) 243
MspI CCGG 2 cut(s) 62, 95
MspR9I CCNGG 1 cut(s) 96
MwoI GCNNNNNNNGC 1 cut(s) 80
NciI CCSGG 1 cut(s) 96
PfoI TCCNGGA 1 cut(s) 94
PkrI GCNGC 1 cut(s) 141
Ppu21I YACGTR 1 cut(s) 244
PspFI CCCAGC 2 cut(s) 120, 153
RsaI GTAC 1 cut(s) 242
RsaNI GTAC 1 cut(s) 241
SatI GCNGC 1 cut(s) 140
ScrFI CCNGG 1 cut(s) 96
SetI ASST 3 cut(s) 8, 55, 246
SmlI CTYRAG 1 cut(s) 48
SmoI CTYRAG 1 cut(s) 48
SsiI CCGC 4 cut(s) 107, 137, 140, 219
StyD4I CCNGG 1 cut(s) 94
TaiI ACGT 1 cut(s) 246
TauI GCSGC 1 cut(s) 142
XagI CCTNNNNNAGG 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.