Rh6CG046800

CYSTM1 family protein A-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
4613266 .. 4614116
851 bp
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UTR
Exon/CDS
Intron
Rh6CG046800.1

Sequence Viewer

Length: 282 bp
ATGAGCTATTACAACCAGCAACAACCCCCAGTTGGTGTTCCTCCTCCTCAAGGTTATCCACCGGAGGGATATGCCAAAGATGCTTATCCGCCTCCGGGATATCCCCCGCAGGGGTATCCCCAGCAGGGATATCCTCCGCCCCAGGGATACCCCCAGCAATACCCTCCTCCCTATGCTCCTCAATACGCTCAGCCTCCCCCTCAACAACAACAAAACAATAGCAGTGGATTTATGGAAGGCTGGTACGTGACTCTCTTTCTTTCTCTTTGTATTTGGGTCTGA

Protein Analysis

93

Amino Acids

10.49

Weight (kDa)

4.14

Isoelectric Point (pI)

93.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 89, 107, 137
AfaI GTAC 1 cut(s) 245
AfiI CCNNNNNNNGG 8 cut(s) 32, 50, 65, 95, 110, 111, 125, 143
AjnI CCWGG 1 cut(s) 141
AluBI AGCT 1 cut(s) 6
AluI AGCT 1 cut(s) 6
AsuC2I CCSGG 1 cut(s) 96
BciT130I CCWGG 1 cut(s) 143
BciVI GTATCC 2 cut(s) 126, 140
BcnI CCSGG 1 cut(s) 96
BfuI GTATCC 2 cut(s) 126, 140
BlpI GCTNAGC 1 cut(s) 189
Bme1390I CCNGG 2 cut(s) 96, 143
BmrFI CCNGG 2 cut(s) 96, 143
BmrI ACTGGG 1 cut(s) 23
BmsI GCATC 1 cut(s) 70
BmuI ACTGGG 1 cut(s) 23
Bpu1102I GCTNAGC 1 cut(s) 189
BpuEI CTTGAG 1 cut(s) 33
BpuMI CCSGG 1 cut(s) 96
BsaAI YACGTR 1 cut(s) 247
BsaBI GATNNNNATC 1 cut(s) 84
BsaJI CCNNGG 2 cut(s) 141, 142
BsaWI WCCGGW 1 cut(s) 61
Bsc4I CCNNNNNNNGG 8 cut(s) 32, 50, 65, 95, 110, 111, 125, 143
Bse1I ACTGG 1 cut(s) 29
Bse8I GATNNNNATC 1 cut(s) 84
BseBI CCWGG 1 cut(s) 143
BseDI CCNNGG 2 cut(s) 141, 142
BseJI GATNNNNATC 1 cut(s) 84
BseLI CCNNNNNNNGG 8 cut(s) 32, 50, 65, 95, 110, 111, 125, 143
BseMII CTCAG 1 cut(s) 203
BseNI ACTGG 1 cut(s) 29
BseRI GAGGAG 4 cut(s) 33, 36, 156, 168
BseYI CCCAGC 2 cut(s) 120, 153
BsiSI CCGG 2 cut(s) 62, 95
BslI CCNNNNNNNGG 8 cut(s) 32, 50, 65, 95, 110, 111, 125, 143
Bsp1720I GCTNAGC 1 cut(s) 189
BspACI CCGC 3 cut(s) 89, 107, 137
BspCNI CTCAG 1 cut(s) 202
BsrI ACTGG 1 cut(s) 29
BssECI CCNNGG 2 cut(s) 141, 142
Bst2UI CCWGG 1 cut(s) 143
BstBAI YACGTR 1 cut(s) 247
BstDEI CTNAG 1 cut(s) 189
BstENI CCTNNNNNAGG 1 cut(s) 48
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 1 cut(s) 143
BstSCI CCNGG 2 cut(s) 94, 141
BsuI GTATCC 2 cut(s) 126, 140
BtsI GCAGTG 1 cut(s) 229
BtsIMutI CAGTG 1 cut(s) 229
Csp6I GTAC 1 cut(s) 244
CspCI CAANNNNNGTGG 2 cut(s) 205, 240
CviJI RGCY 3 cut(s) 6, 193, 240
CviKI_1 RGCY 3 cut(s) 6, 193, 240
CviQI GTAC 1 cut(s) 244
DdeI CTNAG 1 cut(s) 189
EciI GGCGGA 2 cut(s) 78, 126
Eco32I GATATC 2 cut(s) 101, 131
EcoNI CCTNNNNNAGG 1 cut(s) 48
EcoRII CCWGG 1 cut(s) 141
EcoRV GATATC 2 cut(s) 101, 131
FaiI YATR 3 cut(s) 72, 174, 233
FauI CCCGC 1 cut(s) 114
GsaI CCCAGC 2 cut(s) 124, 157
HapII CCGG 2 cut(s) 62, 95
HinfI GANTC 1 cut(s) 250
HpaII CCGG 2 cut(s) 62, 95
Hpy188I TCNGA 1 cut(s) 281
HpyAV CCTTC 1 cut(s) 230
HpyCH4IV ACGT 1 cut(s) 246
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 189
HpySE526I ACGT 1 cut(s) 246
LmnI GCTCC 1 cut(s) 181
LweI GCATC 1 cut(s) 70
MaeII ACGT 1 cut(s) 246
MaeIII GTNAC 1 cut(s) 247
MlyI GAGTC 1 cut(s) 244
MspI CCGG 2 cut(s) 62, 95
MspR9I CCNGG 2 cut(s) 96, 143
MvaI CCWGG 1 cut(s) 143
MwoI GCNNNNNNNGC 1 cut(s) 80
NciI CCSGG 1 cut(s) 96
NmuCI GTSAC 1 cut(s) 247
PasI CCCWGGG 1 cut(s) 142
PfoI TCCNGGA 1 cut(s) 94
PleI GAGTC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 244
Ppu21I YACGTR 1 cut(s) 247
Psp6I CCWGG 1 cut(s) 141
PspFI CCCAGC 2 cut(s) 120, 153
PspGI CCWGG 1 cut(s) 141
RsaI GTAC 1 cut(s) 245
RsaNI GTAC 1 cut(s) 244
SchI GAGTC 1 cut(s) 244
ScrFI CCNGG 2 cut(s) 96, 143
SetI ASST 3 cut(s) 8, 55, 249
SfaNI GCATC 1 cut(s) 70
SmlI CTYRAG 1 cut(s) 48
SmoI CTYRAG 1 cut(s) 48
SsiI CCGC 3 cut(s) 89, 107, 137
StyD4I CCNGG 2 cut(s) 94, 141
TaiI ACGT 1 cut(s) 249
TscAI CASTG 1 cut(s) 229
TseFI GTSAC 1 cut(s) 247
Tsp45I GTSAC 1 cut(s) 247
TspRI CASTG 1 cut(s) 229
XagI CCTNNNNNAGG 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.