Heavy-metal-associated domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27590 AT4G27590 |
| fragaria_vesca | FvH4_7g33050 |
| malus_domestica | MD01G1229600.v1.1 MD07G1301600.v1.1 |
| prunus_persica | Prupe.2G320200_v2.0.a1 |
| pyrus_communis | pycom01g23770 pycom07g27430 pycom16g17880 |
| rosa_chinensis | RchiOBHm_Chr1g0383061 |
| rosa_multiflora | Rmu_sc0000634.1_g000005 Rmu_sc0002030.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00277650 Rroxscaffold_7G00192580 |
| rosa_rugosa | Rorug01G0438000 |
| rosa_samantha | Rh1AG463700 Rh1BG420900 Rh1CG434400 Rh1DG111000 Rh1DG111100 Rh1DG453500 Rh6CG215000 Rh6DG206100 |
| rosa_wichuraiana | Rw1G008470 Rw1G040850 Rw6G018190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 192 |
| AfaI | GTAC | 1 cut(s) | 272 |
| AgsI | TTSAA | 2 cut(s) | 188, 294 |
| AluBI | AGCT | 2 cut(s) | 151, 324 |
| AluI | AGCT | 2 cut(s) | 151, 324 |
| Alw26I | GTCTC | 1 cut(s) | 192 |
| AspS9I | GGNCC | 1 cut(s) | 135 |
| AsuHPI | GGTGA | 2 cut(s) | 107, 340 |
| AvaII | GGWCC | 1 cut(s) | 135 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 195, 227 |
| BbsI | GAAGAC | 3 cut(s) | 53, 180, 337 |
| BccI | CCATC | 1 cut(s) | 188 |
| BciVI | GTATCC | 1 cut(s) | 17 |
| BcoDI | GTCTC | 1 cut(s) | 192 |
| BfaI | CTAG | 1 cut(s) | 306 |
| BfuI | GTATCC | 1 cut(s) | 17 |
| BmcAI | AGTACT | 1 cut(s) | 272 |
| Bme18I | GGWCC | 1 cut(s) | 135 |
| BmgT120I | GGNCC | 1 cut(s) | 135 |
| BpiI | GAAGAC | 3 cut(s) | 53, 180, 337 |
| BpuEI | CTTGAG | 1 cut(s) | 346 |
| BsmAI | GTCTC | 1 cut(s) | 192 |
| BsmBI | CGTCTC | 1 cut(s) | 192 |
| BspHI | TCATGA | 1 cut(s) | 368 |
| Bst4CI | ACNGT | 3 cut(s) | 111, 128, 223 |
| BstEII | GGTNACC | 1 cut(s) | 310 |
| BstMAI | GTCTC | 1 cut(s) | 192 |
| BstPI | GGTNACC | 1 cut(s) | 310 |
| BstV2I | GAAGAC | 3 cut(s) | 53, 180, 337 |
| BsuI | GTATCC | 1 cut(s) | 17 |
| BtsIMutI | CAGTG | 1 cut(s) | 228 |
| CciI | TCATGA | 1 cut(s) | 368 |
| Cfr13I | GGNCC | 1 cut(s) | 135 |
| Csp6I | GTAC | 1 cut(s) | 271 |
| CviAII | CATG | 3 cut(s) | 333, 363, 369 |
| CviJI | RGCY | 4 cut(s) | 151, 286, 299, 324 |
| CviKI_1 | RGCY | 4 cut(s) | 151, 286, 299, 324 |
| CviQI | GTAC | 1 cut(s) | 271 |
| Eco32I | GATATC | 1 cut(s) | 231 |
| Eco47I | GGWCC | 1 cut(s) | 135 |
| Eco57I | CTGAAG | 1 cut(s) | 192 |
| Eco91I | GGTNACC | 1 cut(s) | 310 |
| EcoO65I | GGTNACC | 1 cut(s) | 310 |
| EcoRV | GATATC | 1 cut(s) | 231 |
| Esp3I | CGTCTC | 1 cut(s) | 192 |
| FaeI | CATG | 3 cut(s) | 336, 366, 372 |
| FaiI | YATR | 5 cut(s) | 77, 89, 334, 364, 370 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 271, 303, 329, 361 |
| FatI | CATG | 3 cut(s) | 332, 362, 368 |
| FspBI | CTAG | 1 cut(s) | 306 |
| Hin1II | CATG | 3 cut(s) | 336, 366, 372 |
| HincII | GTYRAC | 1 cut(s) | 114 |
| HindII | GTYRAC | 1 cut(s) | 114 |
| HinfI | GANTC | 2 cut(s) | 166, 236 |
| HphI | GGTGA | 2 cut(s) | 107, 340 |
| Hpy166II | GTNNAC | 1 cut(s) | 114 |
| Hpy188I | TCNGA | 1 cut(s) | 235 |
| Hpy188III | TCNNGA | 3 cut(s) | 170, 240, 369 |
| Hpy8I | GTNNAC | 1 cut(s) | 114 |
| HpyAV | CCTTC | 3 cut(s) | 20, 297, 331 |
| HpyCH4III | ACNGT | 3 cut(s) | 111, 128, 223 |
| HpyCH4IV | ACGT | 1 cut(s) | 71 |
| HpyCH4V | TGCA | 2 cut(s) | 79, 261 |
| HpySE526I | ACGT | 1 cut(s) | 71 |
| Hsp92II | CATG | 3 cut(s) | 336, 366, 372 |
| LmnI | GCTCC | 1 cut(s) | 156 |
| LpnPI | CCDG | 3 cut(s) | 67, 183, 364 |
| MaeI | CTAG | 1 cut(s) | 306 |
| MaeII | ACGT | 1 cut(s) | 71 |
| MaeIII | GTNAC | 4 cut(s) | 122, 223, 237, 310 |
| MboII | GAAGA | 7 cut(s) | 37, 58, 74, 185, 200, 282, 337 |
| MluCI | AATT | 2 cut(s) | 28, 39 |
| MlyI | GAGTC | 1 cut(s) | 245 |
| MnlI | CCTC | 4 cut(s) | 48, 126, 165, 325 |
| MseI | TTAA | 1 cut(s) | 278 |
| MslI | CAYNNNNRTG | 1 cut(s) | 367 |
| NlaIII | CATG | 3 cut(s) | 336, 366, 372 |
| NmuCI | GTSAC | 2 cut(s) | 223, 237 |
| PagI | TCATGA | 1 cut(s) | 368 |
| PfeI | GAWTC | 1 cut(s) | 166 |
| PleI | GAGTC | 1 cut(s) | 244 |
| PpsI | GAGTC | 1 cut(s) | 244 |
| PspEI | GGTNACC | 1 cut(s) | 310 |
| PspPI | GGNCC | 1 cut(s) | 135 |
| RsaI | GTAC | 1 cut(s) | 272 |
| RsaNI | GTAC | 1 cut(s) | 271 |
| RseI | CAYNNNNRTG | 1 cut(s) | 367 |
| SaqAI | TTAA | 1 cut(s) | 278 |
| Sau96I | GGNCC | 1 cut(s) | 135 |
| ScaI | AGTACT | 1 cut(s) | 272 |
| SchI | GAGTC | 1 cut(s) | 245 |
| SetI | ASST | 5 cut(s) | 74, 124, 153, 317, 326 |
| SinI | GGWCC | 1 cut(s) | 135 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 367 |
| SmlI | CTYRAG | 1 cut(s) | 325 |
| SmoI | CTYRAG | 1 cut(s) | 325 |
| Sse9I | AATT | 2 cut(s) | 28, 39 |
| SspMI | CTAG | 1 cut(s) | 306 |
| TaaI | ACNGT | 3 cut(s) | 111, 128, 223 |
| TaiI | ACGT | 1 cut(s) | 74 |
| TasI | AATT | 2 cut(s) | 28, 39 |
| TatI | WGTACW | 1 cut(s) | 270 |
| TfiI | GAWTC | 1 cut(s) | 166 |
| Tru1I | TTAA | 1 cut(s) | 278 |
| Tru9I | TTAA | 1 cut(s) | 278 |
| TscAI | CASTG | 1 cut(s) | 228 |
| TseFI | GTSAC | 2 cut(s) | 223, 237 |
| Tsp45I | GTSAC | 2 cut(s) | 223, 237 |
| TspDTI | ATGAA | 2 cut(s) | 75, 351 |
| TspGWI | ACGGA | 1 cut(s) | 65 |
| TspRI | CASTG | 1 cut(s) | 228 |
| VpaK11BI | GGWCC | 1 cut(s) | 135 |
| XspI | CTAG | 1 cut(s) | 306 |
| ZrmI | AGTACT | 1 cut(s) | 272 |