Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000036421 |
| rosa_multiflora | Rmu_co8321223.1_g000001 Rmu_sc0000441.1_g000003 Rmu_sc0000470.1_g000009 Rmu_sc0001694.1_g000026 Rmu_sc0006059.1_g000038 Rmu_sc0010720.1_g000005 Rmu_sc0011178.1_g000002 Rmu_sc0012409.1_g000004 Rmu_sc0012535.1_g000007 Rmu_ssc0000467.1_g000043 |
| rosa_rugosa | Rorug02G0074200 Rorug05G0089300 Rorug05G0370300 |
| rosa_samantha | Rh1DG240000 Rh4DG427300 Rh6CG287000 Rh6DG280000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 144 |
| AfaI | GTAC | 3 cut(s) | 108, 162, 217 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 144 |
| AluBI | AGCT | 3 cut(s) | 61, 77, 194 |
| AluI | AGCT | 3 cut(s) | 61, 77, 194 |
| Alw21I | GWGCWC | 1 cut(s) | 156 |
| ApeKI | GCWGC | 2 cut(s) | 188, 191 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 232, 264 |
| AsuHPI | GGTGA | 1 cut(s) | 127 |
| Bbv12I | GWGCWC | 1 cut(s) | 156 |
| BbvI | GCAGC | 2 cut(s) | 175, 203 |
| BccI | CCATC | 1 cut(s) | 176 |
| BciVI | GTATCC | 1 cut(s) | 45 |
| BfaI | CTAG | 2 cut(s) | 48, 219 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BfuI | GTATCC | 1 cut(s) | 45 |
| BisI | GCNGC | 2 cut(s) | 189, 192 |
| BlsI | GCNGC | 2 cut(s) | 190, 193 |
| BmcAI | AGTACT | 1 cut(s) | 217 |
| BmsI | GCATC | 1 cut(s) | 34 |
| Bpu10I | CCTNAGC | 1 cut(s) | 78 |
| BpuEI | CTTGAG | 1 cut(s) | 232 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 144 |
| Bse1I | ACTGG | 1 cut(s) | 22 |
| BseGI | GGATG | 1 cut(s) | 154 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseMII | CTCAG | 1 cut(s) | 92 |
| BseNI | ACTGG | 1 cut(s) | 22 |
| BseXI | GCAGC | 2 cut(s) | 175, 203 |
| BsiHKAI | GWGCWC | 1 cut(s) | 156 |
| BslFI | GGGAC | 1 cut(s) | 28 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BsmFI | GGGAC | 1 cut(s) | 28 |
| Bsp1286I | GDGCHC | 1 cut(s) | 156 |
| Bsp1407I | TGTACA | 1 cut(s) | 106 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BspMAI | CTGCAG | 1 cut(s) | 193 |
| BsrGI | TGTACA | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 22 |
| Bst4CI | ACNGT | 1 cut(s) | 115 |
| BstAUI | TGTACA | 1 cut(s) | 106 |
| BstDEI | CTNAG | 2 cut(s) | 6, 78 |
| BstF5I | GGATG | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 83 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BstV1I | GCAGC | 2 cut(s) | 175, 203 |
| BsuI | GTATCC | 1 cut(s) | 45 |
| BtsCI | GGATG | 1 cut(s) | 154 |
| Csp6I | GTAC | 3 cut(s) | 107, 161, 216 |
| CviAII | CATG | 1 cut(s) | 243 |
| CviJI | RGCY | 4 cut(s) | 61, 77, 188, 194 |
| CviKI_1 | RGCY | 4 cut(s) | 61, 77, 188, 194 |
| CviQI | GTAC | 3 cut(s) | 107, 161, 216 |
| DdeI | CTNAG | 2 cut(s) | 6, 78 |
| FaeI | CATG | 1 cut(s) | 246 |
| FaiI | YATR | 7 cut(s) | 24, 37, 72, 103, 105, 131, 244 |
| FaqI | GGGAC | 1 cut(s) | 28 |
| FatI | CATG | 1 cut(s) | 242 |
| FauNDI | CATATG | 1 cut(s) | 103 |
| Fnu4HI | GCNGC | 2 cut(s) | 189, 192 |
| FokI | GGATG | 1 cut(s) | 161 |
| Fsp4HI | GCNGC | 2 cut(s) | 189, 192 |
| FspBI | CTAG | 2 cut(s) | 48, 219 |
| GluI | GCNGC | 2 cut(s) | 189, 192 |
| Hin1II | CATG | 1 cut(s) | 246 |
| HincII | GTYRAC | 1 cut(s) | 98 |
| HindII | GTYRAC | 1 cut(s) | 98 |
| HinfI | GANTC | 1 cut(s) | 94 |
| HphI | GGTGA | 1 cut(s) | 127 |
| Hpy166II | GTNNAC | 1 cut(s) | 98 |
| Hpy188III | TCNNGA | 1 cut(s) | 179 |
| Hpy8I | GTNNAC | 1 cut(s) | 98 |
| HpyAV | CCTTC | 1 cut(s) | 75 |
| HpyCH4III | ACNGT | 1 cut(s) | 115 |
| HpyCH4IV | ACGT | 1 cut(s) | 264 |
| HpyCH4V | TGCA | 1 cut(s) | 191 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 78 |
| HpySE526I | ACGT | 1 cut(s) | 264 |
| Hsp92II | CATG | 1 cut(s) | 246 |
| LmnI | GCTCC | 1 cut(s) | 170 |
| LpnPI | CCDG | 2 cut(s) | 3, 65 |
| Lsp1109I | GCAGC | 2 cut(s) | 175, 203 |
| LweI | GCATC | 1 cut(s) | 34 |
| MaeI | CTAG | 2 cut(s) | 48, 219 |
| MaeII | ACGT | 1 cut(s) | 264 |
| MboII | GAAGA | 1 cut(s) | 242 |
| MhlI | GDGCHC | 1 cut(s) | 156 |
| MluCI | AATT | 1 cut(s) | 142 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MnlI | CCTC | 2 cut(s) | 144, 178 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 83 |
| NdeI | CATATG | 1 cut(s) | 103 |
| NlaIII | CATG | 1 cut(s) | 246 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 144 |
| PkrI | GCNGC | 2 cut(s) | 190, 193 |
| PleI | GAGTC | 1 cut(s) | 102 |
| PpsI | GAGTC | 1 cut(s) | 102 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 114, 146 |
| PstI | CTGCAG | 1 cut(s) | 193 |
| RsaI | GTAC | 3 cut(s) | 108, 162, 217 |
| RsaNI | GTAC | 3 cut(s) | 107, 161, 216 |
| SatI | GCNGC | 2 cut(s) | 189, 192 |
| ScaI | AGTACT | 1 cut(s) | 217 |
| SchI | GAGTC | 1 cut(s) | 103 |
| SduI | GDGCHC | 1 cut(s) | 156 |
| SetI | ASST | 9 cut(s) | 12, 63, 67, 79, 84, 136, 162, 196, 267 |
| SfaNI | GCATC | 1 cut(s) | 34 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SmlI | CTYRAG | 1 cut(s) | 211 |
| SmoI | CTYRAG | 1 cut(s) | 211 |
| Sse9I | AATT | 1 cut(s) | 142 |
| SspMI | CTAG | 2 cut(s) | 48, 219 |
| TaaI | ACNGT | 1 cut(s) | 115 |
| TaiI | ACGT | 1 cut(s) | 267 |
| TasI | AATT | 1 cut(s) | 142 |
| TatI | WGTACW | 2 cut(s) | 106, 215 |
| TseI | GCWGC | 2 cut(s) | 188, 191 |
| TspDTI | ATGAA | 1 cut(s) | 135 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 144 |
| XspI | CTAG | 2 cut(s) | 48, 219 |
| ZrmI | AGTACT | 1 cut(s) | 217 |