Rh7BG015700

WUSCHEL-related homeobox

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
1004010 .. 1004324
315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG015700.1

Sequence Viewer

Length: 315 bp
ATGGAGATGGACCAAAAGCAGCTCATTAATAACCGTAATAATAAGACTAGTCCTCCTCATGATCTCAGCATCTTTATAGCTCCCTACAGGTCTGGCTCTGCCCTTAACGGTCGCCATCTCCAACAAAACCAACACCGTAACGAAGAAGAAGATATTTCACGTGGAGATCAGTCTCAAACCCTCCAGCTATTTCCGCTCCGGAGTAGTACTTGCGGCGAAAAAGATCATCTTACAACTGAGAAATCCTTGCTAAACCCTAGTTTCGGCACTGGCCCTAATTACCAGTTTTTTGAGTTCCTCCCATTGAAGAACTGA

Protein Analysis

104

Amino Acids

11.95

Weight (kDa)

6.4

Isoelectric Point (pI)

61.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015046)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 196
AccIII TCCGGA 1 cut(s) 198
AciI CCGC 2 cut(s) 194, 213
AcvI CACGTG 1 cut(s) 161
AfaI GTAC 1 cut(s) 208
AfiI CCNNNNNNNGG 1 cut(s) 263
AgsI TTSAA 1 cut(s) 307
AhlI ACTAGT 1 cut(s) 47
AluBI AGCT 3 cut(s) 22, 80, 187
AluI AGCT 3 cut(s) 22, 80, 187
Alw26I GTCTC 1 cut(s) 177
Aor13HI TCCGGA 1 cut(s) 198
AoxI GGCC 1 cut(s) 271
ApeKI GCWGC 1 cut(s) 19
AseI ATTAAT 1 cut(s) 27
AspS9I GGNCC 2 cut(s) 10, 272
AvaII GGWCC 1 cut(s) 10
BbrPI CACGTG 1 cut(s) 161
BbvI GCAGC 1 cut(s) 31
BccI CCATC 1 cut(s) 123
BcoDI GTCTC 1 cut(s) 177
BcuI ACTAGT 1 cut(s) 47
BfaI CTAG 2 cut(s) 48, 258
BfmI CTRYAG 1 cut(s) 85
BisI GCNGC 2 cut(s) 20, 214
BlsI GCNGC 2 cut(s) 21, 215
BmcAI AGTACT 1 cut(s) 208
Bme18I GGWCC 1 cut(s) 10
BmgT120I GGNCC 2 cut(s) 10, 272
BmsI GCATC 1 cut(s) 78
BpmI CTGGAG 1 cut(s) 167
BsaAI YACGTR 1 cut(s) 161
BsaWI WCCGGW 1 cut(s) 198
BsaXI ACNNNNNCTCC 2 cut(s) 37, 67
Bsc4I CCNNNNNNNGG 1 cut(s) 263
Bse1I ACTGG 2 cut(s) 274, 283
BseAI TCCGGA 1 cut(s) 198
BseLI CCNNNNNNNGG 1 cut(s) 263
BseMII CTCAG 2 cut(s) 79, 228
BseNI ACTGG 2 cut(s) 274, 283
BseRI GAGGAG 1 cut(s) 45
BseXI GCAGC 1 cut(s) 31
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 1 cut(s) 273
BsiEI CGRYCG 1 cut(s) 112
BsiSI CCGG 1 cut(s) 199
BslI CCNNNNNNNGG 1 cut(s) 263
BsmAI GTCTC 1 cut(s) 177
BsnI GGCC 1 cut(s) 273
Bsp13I TCCGGA 1 cut(s) 198
Bsp143I GATC 3 cut(s) 61, 166, 223
BspACI CCGC 2 cut(s) 194, 213
BspANI GGCC 1 cut(s) 273
BspCNI CTCAG 2 cut(s) 78, 229
BspEI TCCGGA 1 cut(s) 198
BspHI TCATGA 1 cut(s) 58
BsrBI CCGCTC 1 cut(s) 196
BsrI ACTGG 2 cut(s) 274, 283
BssMI GATC 3 cut(s) 61, 166, 223
Bst4CI ACNGT 3 cut(s) 35, 110, 137
BstBAI YACGTR 1 cut(s) 161
BstDEI CTNAG 2 cut(s) 65, 237
BstKTI GATC 3 cut(s) 64, 169, 226
BstMAI GTCTC 1 cut(s) 177
BstMBI GATC 3 cut(s) 61, 166, 223
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 1 cut(s) 193
BstSFI CTRYAG 1 cut(s) 85
BstV1I GCAGC 1 cut(s) 31
BsuRI GGCC 1 cut(s) 273
BtsIMutI CAGTG 1 cut(s) 267
CciI TCATGA 1 cut(s) 58
Cfr13I GGNCC 2 cut(s) 10, 272
Csp6I GTAC 1 cut(s) 207
CviAII CATG 1 cut(s) 59
CviJI RGCY 5 cut(s) 22, 80, 96, 187, 273
CviKI_1 RGCY 5 cut(s) 22, 80, 96, 187, 273
CviQI GTAC 1 cut(s) 207
DdeI CTNAG 2 cut(s) 65, 237
DpnI GATC 3 cut(s) 63, 168, 225
DpnII GATC 3 cut(s) 61, 166, 223
Eco47I GGWCC 1 cut(s) 10
Eco72I CACGTG 1 cut(s) 161
FaeI CATG 1 cut(s) 62
FaiI YATR 2 cut(s) 60, 77
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FatI CATG 1 cut(s) 58
Fnu4HI GCNGC 2 cut(s) 20, 214
Fsp4HI GCNGC 2 cut(s) 20, 214
FspBI CTAG 2 cut(s) 48, 258
GluI GCNGC 2 cut(s) 20, 214
GsuI CTGGAG 1 cut(s) 167
HaeIII GGCC 1 cut(s) 273
HapII CCGG 1 cut(s) 199
Hin1II CATG 1 cut(s) 62
HpaII CCGG 1 cut(s) 199
Hpy188III TCNNGA 2 cut(s) 59, 199
HpyCH4III ACNGT 3 cut(s) 35, 110, 137
HpyCH4IV ACGT 1 cut(s) 160
HpyF10VI GCNNNNNNNGC 1 cut(s) 193
HpyF3I CTNAG 2 cut(s) 65, 237
HpySE526I ACGT 1 cut(s) 160
Hsp92II CATG 1 cut(s) 62
Kpn2I TCCGGA 1 cut(s) 198
Kzo9I GATC 3 cut(s) 61, 166, 223
LmnI GCTCC 2 cut(s) 85, 201
LpnPI CCDG 6 cut(s) 73, 78, 197, 212, 255, 296
Lsp1109I GCAGC 1 cut(s) 31
LweI GCATC 1 cut(s) 78
MaeI CTAG 2 cut(s) 48, 258
MaeII ACGT 1 cut(s) 160
MaeIII GTNAC 1 cut(s) 137
MalI GATC 3 cut(s) 63, 168, 225
MbiI CCGCTC 1 cut(s) 196
MboI GATC 3 cut(s) 61, 166, 223
MboII GAAGA 3 cut(s) 155, 158, 161
MluCI AATT 1 cut(s) 277
MmeI TCCRAC 1 cut(s) 145
MnlI CCTC 4 cut(s) 63, 66, 191, 308
MroI TCCGGA 1 cut(s) 198
MseI TTAA 2 cut(s) 27, 105
MspI CCGG 1 cut(s) 199
MwoI GCNNNNNNNGC 1 cut(s) 193
NdeII GATC 3 cut(s) 61, 166, 223
NlaIII CATG 1 cut(s) 62
PagI TCATGA 1 cut(s) 58
PkrI GCNGC 2 cut(s) 21, 215
PmaCI CACGTG 1 cut(s) 161
PmlI CACGTG 1 cut(s) 161
Ppu21I YACGTR 1 cut(s) 161
PshBI ATTAAT 1 cut(s) 27
PspCI CACGTG 1 cut(s) 161
PspPI GGNCC 2 cut(s) 10, 272
RsaI GTAC 1 cut(s) 208
RsaNI GTAC 1 cut(s) 207
SaqAI TTAA 2 cut(s) 27, 105
SatI GCNGC 2 cut(s) 20, 214
Sau3AI GATC 3 cut(s) 61, 166, 223
Sau96I GGNCC 2 cut(s) 10, 272
ScaI AGTACT 1 cut(s) 208
SetI ASST 5 cut(s) 24, 82, 92, 163, 189
SfaNI GCATC 1 cut(s) 78
SfcI CTRYAG 1 cut(s) 85
SinI GGWCC 1 cut(s) 10
SpeI ACTAGT 1 cut(s) 47
Sse9I AATT 1 cut(s) 277
SsiI CCGC 2 cut(s) 194, 213
SspMI CTAG 2 cut(s) 48, 258
TaaI ACNGT 3 cut(s) 35, 110, 137
TaiI ACGT 1 cut(s) 163
TasI AATT 1 cut(s) 277
TatI WGTACW 1 cut(s) 206
TauI GCSGC 1 cut(s) 216
Tru1I TTAA 2 cut(s) 27, 105
Tru9I TTAA 2 cut(s) 27, 105
TscAI CASTG 1 cut(s) 274
TseI GCWGC 1 cut(s) 19
TspRI CASTG 1 cut(s) 274
VpaK11BI GGWCC 1 cut(s) 10
VspI ATTAAT 1 cut(s) 27
XspI CTAG 2 cut(s) 48, 258
ZrmI AGTACT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.