Rh7BG090700

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0015700
Physical Location & Seq
Reverse (-)
6697599 .. 6697946
348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG090700.1

Sequence Viewer

Length: 348 bp
ATGAAGATGCCGAAATGCATAAGCATTGAGATGCTGCTAAACCTGGTAGCCTTCTTCAAGCTCATAGTTCTAATGGCACTCAACCATCTGGGTCTCTTCAAACCTTCAGAACACATGACTGACTCCACGGAAGAACAACAACATTATACCAATTATGTTGTTGTGCTCGATCATCTGTGTCCATCAATAATCCCAGTTCATGTTCTAACAGCACACATCAAGAAGCTTCCAGTAGTAGAGTTCGGTCAAGCGCTTGAAAAATGCAAAAAATACAAGGATGAGGGCAAGGCTATAGTATGCAACATTTGCTTGGACTGCATAGAAAGCAGTCATGAGGTGACAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

115

Amino Acids

13.07

Weight (kDa)

6.14

Isoelectric Point (pI)

52.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 90
AfeI AGCGCT 1 cut(s) 252
AgsI TTSAA 3 cut(s) 58, 100, 257
AjnI CCWGG 1 cut(s) 42
AluBI AGCT 2 cut(s) 61, 226
AluI AGCT 2 cut(s) 61, 226
Alw21I GWGCWC 1 cut(s) 168
Alw26I GTCTC 1 cut(s) 98
Aor51HI AGCGCT 1 cut(s) 252
ApeKI GCWGC 1 cut(s) 34
AspLEI GCGC 1 cut(s) 253
Bbv12I GWGCWC 1 cut(s) 168
BbvI GCAGC 1 cut(s) 21
BccI CCATC 2 cut(s) 93, 190
BciT130I CCWGG 1 cut(s) 44
BcoDI GTCTC 1 cut(s) 98
BfmI CTRYAG 1 cut(s) 291
BfoI RGCGCY 1 cut(s) 254
BisI GCNGC 1 cut(s) 35
BlsI GCNGC 1 cut(s) 36
Bme1390I CCNGG 1 cut(s) 44
BmrFI CCNGG 1 cut(s) 44
BmrI ACTGGG 1 cut(s) 188
BmsI GCATC 1 cut(s) 21
BmuI ACTGGG 1 cut(s) 188
BsaI GGTCTC 1 cut(s) 98
BsaJI CCNNGG 1 cut(s) 126
Bse1I ACTGG 2 cut(s) 194, 230
BseBI CCWGG 1 cut(s) 44
BseDI CCNNGG 1 cut(s) 126
BseGI GGATG 1 cut(s) 283
BseNI ACTGG 2 cut(s) 194, 230
BseXI GCAGC 1 cut(s) 21
BsiHKAI GWGCWC 1 cut(s) 168
BsmAI GTCTC 1 cut(s) 98
Bso31I GGTCTC 1 cut(s) 98
Bsp1286I GDGCHC 1 cut(s) 168
Bsp143I GATC 1 cut(s) 169
BspHI TCATGA 1 cut(s) 331
BspTNI GGTCTC 1 cut(s) 98
BsrI ACTGG 2 cut(s) 194, 230
BssECI CCNNGG 1 cut(s) 126
BssMI GATC 1 cut(s) 169
Bst2UI CCWGG 1 cut(s) 44
Bst6I CTCTTC 1 cut(s) 101
BstAPI GCANNNNNTGC 1 cut(s) 306
BstDSI CCRYGG 1 cut(s) 126
BstF5I GGATG 1 cut(s) 283
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 1 cut(s) 253
BstKTI GATC 1 cut(s) 172
BstMAI GTCTC 1 cut(s) 98
BstMBI GATC 1 cut(s) 169
BstMWI GCNNNNNNNGC 3 cut(s) 306, 315, 324
BstNI CCWGG 1 cut(s) 44
BstSCI CCNGG 1 cut(s) 42
BstSFI CTRYAG 1 cut(s) 291
BstV1I GCAGC 1 cut(s) 21
BtgI CCRYGG 1 cut(s) 126
BtsCI GGATG 1 cut(s) 283
CciI TCATGA 1 cut(s) 331
CfoI GCGC 1 cut(s) 253
CsiI ACCWGGT 1 cut(s) 42
CviAII CATG 3 cut(s) 115, 200, 332
CviJI RGCY 4 cut(s) 50, 61, 226, 290
CviKI_1 RGCY 4 cut(s) 50, 61, 226, 290
DpnI GATC 1 cut(s) 171
DpnII GATC 1 cut(s) 169
Eam1104I CTCTTC 1 cut(s) 101
EarI CTCTTC 1 cut(s) 101
Eco31I GGTCTC 1 cut(s) 98
Eco47III AGCGCT 1 cut(s) 252
Eco57I CTGAAG 1 cut(s) 90
EcoRII CCWGG 1 cut(s) 42
EcoT22I ATGCAT 1 cut(s) 20
FaeI CATG 3 cut(s) 118, 203, 335
FatI CATG 3 cut(s) 114, 199, 331
Fnu4HI GCNGC 1 cut(s) 35
FokI GGATG 1 cut(s) 290
Fsp4HI GCNGC 1 cut(s) 35
GlaI GCGC 1 cut(s) 252
GluI GCNGC 1 cut(s) 35
HaeII RGCGCY 1 cut(s) 254
HhaI GCGC 1 cut(s) 253
Hin1II CATG 3 cut(s) 118, 203, 335
Hin6I GCGC 1 cut(s) 251
HinP1I GCGC 1 cut(s) 251
HindIII AAGCTT 1 cut(s) 224
HinfI GANTC 1 cut(s) 122
Hpy188I TCNGA 1 cut(s) 109
Hpy188III TCNNGA 2 cut(s) 220, 332
HpyAV CCTTC 2 cut(s) 61, 114
HpyCH4V TGCA 4 cut(s) 18, 264, 300, 318
HpyF10VI GCNNNNNNNGC 3 cut(s) 306, 315, 324
Hsp92II CATG 3 cut(s) 118, 203, 335
HspAI GCGC 1 cut(s) 251
Kzo9I GATC 1 cut(s) 169
LpnPI CCDG 5 cut(s) 29, 56, 74, 207, 243
Lsp1109I GCAGC 1 cut(s) 21
LweI GCATC 1 cut(s) 21
MabI ACCWGGT 1 cut(s) 42
MaeIII GTNAC 1 cut(s) 337
MalI GATC 1 cut(s) 171
MboI GATC 1 cut(s) 169
MboII GAAGA 4 cut(s) 16, 46, 88, 143
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 1 cut(s) 151
MlyI GAGTC 1 cut(s) 116
MnlI CCTC 2 cut(s) 274, 328
Mph1103I ATGCAT 1 cut(s) 20
MslI CAYNNNNRTG 1 cut(s) 29
MspR9I CCNGG 1 cut(s) 44
MvaI CCWGG 1 cut(s) 44
MwoI GCNNNNNNNGC 3 cut(s) 306, 315, 324
NdeII GATC 1 cut(s) 169
NlaIII CATG 3 cut(s) 118, 203, 335
NmuCI GTSAC 1 cut(s) 337
NsiI ATGCAT 1 cut(s) 20
PagI TCATGA 1 cut(s) 331
PkrI GCNGC 1 cut(s) 36
PleI GAGTC 1 cut(s) 116
PpsI GAGTC 1 cut(s) 116
Psp6I CCWGG 1 cut(s) 42
PspGI CCWGG 1 cut(s) 42
RseI CAYNNNNRTG 1 cut(s) 29
SatI GCNGC 1 cut(s) 35
Sau3AI GATC 1 cut(s) 169
SchI GAGTC 1 cut(s) 116
ScrFI CCNGG 1 cut(s) 44
SduI GDGCHC 1 cut(s) 168
SetI ASST 5 cut(s) 45, 63, 106, 228, 339
SexAI ACCWGGT 1 cut(s) 42
SfaNI GCATC 1 cut(s) 21
SfcI CTRYAG 1 cut(s) 291
SmiMI CAYNNNNRTG 1 cut(s) 29
Sse9I AATT 1 cut(s) 151
StyD4I CCNGG 1 cut(s) 42
TaqI TCGA 1 cut(s) 168
TaqII GACCGA 1 cut(s) 233
TasI AATT 1 cut(s) 151
TseFI GTSAC 1 cut(s) 337
TseI GCWGC 1 cut(s) 34
Tsp45I GTSAC 1 cut(s) 337
TspDTI ATGAA 2 cut(s) 17, 188
TspGWI ACGGA 1 cut(s) 143
Zsp2I ATGCAT 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.