Rw1G040360

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0004502
Physical Location & Seq
Reverse (-)
67663357 .. 67672376
9020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G040360.1

Sequence Viewer

Length: 2220 bp
ATGGGTGTCGAGAATTATCATGTAATTGAGCTTGTGGGCGAAGGTTCCTTTGGGAAGGTATACAAGGGAAGACGCAAGTTCACAGGCCAGACCGTTGCGATGAAATTTATTATGAAACACGGGAAAAGCGACAAGGATATCCACAATTTAAGACAAGAAATAGAGATTCTAAGGAAGCTAAAGCATGAAAATATCATTGAAATGCTTGATTCCTTTGAAAGCCCACAAGAATTCTGTGTTGTCACAGAGTTTGCACAAGGTGAACTATTTGAAATTCTTGAAGATGATAAGCACCTTCCAGAAGAACAAGTTCAAGCAATTGCTAAGCAATTGGTGAGAGCATTGCATTATCTCCATTCAAACCGTATAATCCATCGTGACATGAAACCACAAAATATTCTCATTGGAGCTGGTTCTATTGTTAAGCTCTGTGACTTTGGGTTTGCACGTGCAATGTCCACAAATACTGTTGTTTTGCGATCCATAAAAGGTACTCCCCTGTACATGGCTCCTGAACTAGTACGGGAACAACCTTACAACCACACTGCAGATTTATGGTCTCTCGGAGTTATATTATATGAATTATTTGTTGGCCAGCCTCCATTTTATACAAATTCAGTATATGCACTCATTCGGCATATTGTGAAGGATCCAGTTAAATACCCTGATAACATGAGTTCAAATTTTAAAAACTTTCTGAAGGGATTGCTCAATAAGATGCCTCAAAATCGTTTGACTTGGCCAGCTCTTTTGGAACACCCATTTGTTAAGGAGACAACTGAAGAACTGGAGGCCAGGGAAATGCGTTCTGCTACTTCTGCAGAAAGGGGGTGCGTTGCAGCATGGAGGGGTGAAGGAAACAAAATCCAAACATCAGGTGGCTTGGCTGTTTCTAGTCCTGTCAACTCTCCAGCTTCTTCAGAGAACAACAGTGGAATAAGTTTCCAAAATGATGCTCAAACAAATATTCCAGACTCTAAAGCAGTCAATTCTTCTCCAAATGAGGAGTTTCCAGGGTTTGCAGATCCTGATAAAGTTAAACAGTCAGGTTGTCAAATTCTCGACAGACTGGAAAATAACTCTCGTACAGTTAAAGGTGCACAAATAATTGGTCAAGATAATGAAGCATTAGCACATGTTTTGCTACCACTAAAAAGATTAGGATCCCAAAACTCTAGCAGGGATCAAGATATTCTTACTTCAAACCAGTCTTTAAGAATCCTTTCAAACTTAGTTGCAGCTGGTGCCATCACTTCCAGTGGGCTACTTGATGAAATCATACATGAAATTCTTGTTTATACCACCTTCATTGTGGGCATCAAATCTTCTGAACTGAATGAGTTTAGAGCAAAGAGTTTCTCAGTAATTAAAGTTTTGGTAGACATTGCTGGACATGGCATTGGAGGCTCATATTTCAGGCACTGGGTTGCTTTAGCTGATATTTTTTCACAGGTTGTTGGTGGCAGTGAAGATGCATCTGGAAGAGTTTTGTTTGAGTCCATAGCTTGCATTACTGTCATGTTAACAAGAGTTAATCAGGGTCTGAAACAGGCTGTTTCTGATCCTAATGAAGCAGTGAAACAGATTTTGGATCATGCTAAAACATCTGGTTTAGTGGATCAGCTTTGTCTCTGCTTAGCTACTGCTGGAGCAAGTCTTATTTCAGGTCCTTCAAATATGTCGCGTTCAGCCTGTGAAGCATGCAGGGCTATTTGGTTGCTGGTAGATGCATCAGAGTTTTTTTCGACAAAAGGAAATGCCATTTCCTTTCCGCTAAACACTTTGCGCAGTTCATCAAGGGCTCAAGATCGAGGAGGTTCTCAGATTGGAACAGAATCAGCAAGACTAGTAGCTGTAGTTACTAGAGCATTAGTTAGATCTAAACCAGTTCAGGTTGCCATCCACTATTGCCTTCGTCAACGTCTTGAGGCTTCACTCTGTGCTGGTATTCAGCTATTGTTGAGGTGCTGCTTGCAGAGTGGAATTGTTCCTGGCATTCTTTGTGGCCTGCCTAGTTCTTTACCTGTAACTACTGTTGTCAGTGGTGGAGGTGATGGAACCATAATTTTTGAGATATTCTCTTTGTTGTCTGTGTGCATTTCATCTCAAAATAAAGATCCACAAGCAATTGAGACAACCAACTTGAAGAGCAAAATAACCGATCCCATATGTTGGTTCTGCATTCCTGCCTCATCCTTGCATCAGTTGCACAGTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0006996 GO:0007049 GO:0007112 GO:0007140 GO:0007154 GO:0007163 GO:0007165 GO:0007166 GO:0007224 GO:0007227 GO:0007228 GO:0007275 GO:0007276 GO:0007349 GO:0007584 GO:0008064 GO:0008092 GO:0008134 GO:0008144 GO:0008150 GO:0008152 GO:0008589 GO:0009524 GO:0009553 GO:0009558 GO:0009561 GO:0009605 GO:0009653 GO:0009791 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010639 GO:0010646 GO:0010647 GO:0014070 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019219 GO:0019222 GO:0019538 GO:0019894 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023056 GO:0030010 GO:0030030 GO:0030031 GO:0030554 GO:0030832 GO:0030833 GO:0030837 GO:0031156 GO:0031272 GO:0031323 GO:0031326 GO:0031333 GO:0031344 GO:0031667 GO:0032101 GO:0032104 GO:0032107 GO:0032271 GO:0032272 GO:0032501 GO:0032502 GO:0032504 GO:0032506 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032956 GO:0032970 GO:0033043 GO:0033206 GO:0033273 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043254 GO:0043326 GO:0043327 GO:0043412 GO:0043900 GO:0044085 GO:0044087 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044782 GO:0045880 GO:0048229 GO:0048232 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048609 GO:0048646 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051128 GO:0051129 GO:0051171 GO:0051252 GO:0051301 GO:0051321 GO:0051493 GO:0051494 GO:0051593 GO:0051704 GO:0051716 GO:0060176 GO:0060255 GO:0060271 GO:0060491 GO:0061640 GO:0065007 GO:0065008 GO:0065009 GO:0070925 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090066 GO:0097159 GO:0097367 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140013 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902410 GO:1902903 GO:1902904 GO:1903046 GO:1903047 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04341 map04341
Pfam Domains
Protein Families
Arm HEAT HEAT_2 Pkinase

Protein Analysis

739

Amino Acids

80.86

Weight (kDa)

7.02

Isoelectric Point (pI)

51.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 6 - 256 3.9e-79 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 8 - 251 1.2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1787
AccB1I GGYRCC 1 cut(s) 1244
AccB7I CCANNNNNTGG 1 cut(s) 2172
AccI GTMKAC 2 cut(s) 60, 1380
AccII CGCG 1 cut(s) 1684
AciI CCGC 1 cut(s) 1772
AcoI YGGCCR 2 cut(s) 592, 740
AcsI RAATTY 7 cut(s) 104, 230, 273, 613, 682, 1056, 1287
AcuI CTGAAG 3 cut(s) 719, 801, 903
AcvI CACGTG 1 cut(s) 449
AdeI CACNNNGTG 2 cut(s) 260, 1940
AfaI GTAC 4 cut(s) 493, 503, 522, 1087
AfiI CCNNNNNNNGG 2 cut(s) 505, 2172
AflIII ACRYGT 1 cut(s) 1135
AhlI ACTAGT 2 cut(s) 517, 1846
AjnI CCWGG 3 cut(s) 794, 1012, 1990
AjuI GAANNNNNNNTTGG 6 cut(s) 33, 65, 573, 605, 1571, 1603
Alw21I GWGCWC 1 cut(s) 1102
Alw26I GTCTC 4 cut(s) 564, 767, 1634, 2126
Alw44I GTGCAC 1 cut(s) 1098
AlwNI CAGNNNCTG 3 cut(s) 1028, 1422, 1543
AoxI GGCC 5 cut(s) 85, 592, 740, 792, 2005
ApaLI GTGCAC 1 cut(s) 1098
ApeKI GCWGC 3 cut(s) 839, 1238, 1968
ApoI RAATTY 7 cut(s) 104, 230, 273, 613, 682, 1056, 1287
ArsI GACNNNNNNTTYG 4 cut(s) 425, 457, 1096, 1128
Asp700I GAANNNNTTC 2 cut(s) 309, 1222
AspLEI GCGC 1 cut(s) 1788
AspS9I GGNCC 1 cut(s) 1667
AsuHPI GGTGA 4 cut(s) 272, 346, 863, 2063
AvaII GGWCC 1 cut(s) 1667
BaeGI GKGCMC 1 cut(s) 1102
BalI TGGCCA 2 cut(s) 594, 742
BamHI GGATCC 2 cut(s) 649, 1163
BanI GGYRCC 1 cut(s) 1244
BanII GRGCYC 1 cut(s) 1804
BbrPI CACGTG 1 cut(s) 449
BbsI GAAGAC 1 cut(s) 76
Bbv12I GWGCWC 1 cut(s) 1102
BbvI GCAGC 3 cut(s) 851, 1250, 1955
BccI CCATC 4 cut(s) 381, 1256, 1907, 2048
BciT130I CCWGG 3 cut(s) 796, 1014, 1992
BcoDI GTCTC 4 cut(s) 564, 767, 1634, 2126
BcuI ACTAGT 2 cut(s) 517, 1846
BfaI CTAG 6 cut(s) 518, 894, 1176, 1847, 1863, 2013
BfmI CTRYAG 3 cut(s) 546, 819, 1854
BglII AGATCT 1 cut(s) 1877
BisI GCNGC 3 cut(s) 840, 1239, 1969
BlpI GCTNAGC 2 cut(s) 324, 1636
BlsI GCNGC 3 cut(s) 841, 1240, 1970
Bme1390I CCNGG 3 cut(s) 796, 1014, 1992
Bme18I GGWCC 1 cut(s) 1667
BmgT120I GGNCC 1 cut(s) 1667
BmiI GGNNCC 6 cut(s) 46, 510, 651, 1165, 1246, 2059
BmrFI CCNGG 3 cut(s) 796, 1014, 1992
BmrI ACTGGG 1 cut(s) 1432
BmsI GCATC 8 cut(s) 708, 943, 1326, 1462, 1484, 1717, 1739, 2209
BmuI ACTGGG 1 cut(s) 1432
BpiI GAAGAC 1 cut(s) 76
BplI GAGNNNNNCTC 2 cut(s) 2063, 2095
BpmI CTGGAG 3 cut(s) 809, 894, 1668
Bpu1102I GCTNAGC 2 cut(s) 324, 1636
BpuEI CTTGAG 2 cut(s) 1788, 1946
BsaAI YACGTR 1 cut(s) 449
BsaBI GATNNNNATC 1 cut(s) 1162
BsaI GGTCTC 1 cut(s) 564
BsaJI CCNNGG 2 cut(s) 795, 1013
Bsc4I CCNNNNNNNGG 2 cut(s) 505, 2172
Bse1I ACTGG 7 cut(s) 653, 792, 1074, 1207, 1257, 1427, 1886
Bse3DI GCAATG 3 cut(s) 341, 459, 1383
Bse8I GATNNNNATC 1 cut(s) 1162
BseBI CCWGG 3 cut(s) 796, 1014, 1992
BseDI CCNNGG 2 cut(s) 795, 1013
BseGI GGATG 2 cut(s) 1899, 2192
BseJI GATNNNNATC 1 cut(s) 1162
BseLI CCNNNNNNNGG 2 cut(s) 505, 2172
BseMI GCAATG 3 cut(s) 341, 459, 1383
BseMII CTCAG 2 cut(s) 1374, 1835
BseNI ACTGG 7 cut(s) 653, 792, 1074, 1207, 1257, 1427, 1886
BseRI GAGGAG 2 cut(s) 1019, 1827
BseSI GKGCMC 1 cut(s) 1102
BseXI GCAGC 3 cut(s) 851, 1250, 1955
Bsh1236I CGCG 1 cut(s) 1684
BshFI GGCC 5 cut(s) 87, 594, 742, 794, 2007
BshNI GGYRCC 1 cut(s) 1244
BsiHKAI GWGCWC 1 cut(s) 1102
BslI CCNNNNNNNGG 2 cut(s) 505, 2172
BsmAI GTCTC 4 cut(s) 564, 767, 1634, 2126
BsmI GAATGC 2 cut(s) 1995, 2181
BsnI GGCC 5 cut(s) 87, 594, 742, 794, 2007
Bso31I GGTCTC 1 cut(s) 564
Bsp1286I GDGCHC 2 cut(s) 1102, 1804
Bsp1407I TGTACA 1 cut(s) 501
Bsp1720I GCTNAGC 2 cut(s) 324, 1636
BspACI CCGC 1 cut(s) 1772
BspANI GGCC 5 cut(s) 87, 594, 742, 794, 2007
BspCNI CTCAG 2 cut(s) 1373, 1834
BspFNI CGCG 1 cut(s) 1684
BspLI GGNNCC 6 cut(s) 46, 510, 651, 1165, 1246, 2059
BspMAI CTGCAG 2 cut(s) 550, 823
BspQI GCTCTTC 1 cut(s) 2141
BspT107I GGYRCC 1 cut(s) 1244
BspTNI GGTCTC 1 cut(s) 564
BsrDI GCAATG 3 cut(s) 341, 459, 1383
BsrGI TGTACA 1 cut(s) 501
BsrI ACTGG 7 cut(s) 653, 792, 1074, 1207, 1257, 1427, 1886
BssECI CCNNGG 2 cut(s) 795, 1013
BssNAI GTATAC 1 cut(s) 61
Bst1107I GTATAC 1 cut(s) 61
Bst2UI CCWGG 3 cut(s) 796, 1014, 1992
Bst4CI ACNGT 9 cut(s) 94, 365, 469, 932, 1044, 1090, 1516, 2035, 2213
Bst6I CTCTTC 2 cut(s) 1477, 2141
BstAPI GCANNNNNTGC 2 cut(s) 1244, 2206
BstAUI TGTACA 1 cut(s) 501
BstBAI YACGTR 1 cut(s) 449
BstC8I GCNNGC 6 cut(s) 596, 744, 1507, 1702, 1973, 2009
BstDEI CTNAG 6 cut(s) 170, 324, 1231, 1360, 1636, 1821
BstF5I GGATG 2 cut(s) 1899, 2192
BstFNI CGCG 1 cut(s) 1684
BstHHI GCGC 1 cut(s) 1788
BstMAI GTCTC 4 cut(s) 564, 767, 1634, 2126
BstMWI GCNNNNNNNGC 6 cut(s) 818, 1244, 1404, 1697, 1706, 2206
BstNI CCWGG 3 cut(s) 796, 1014, 1992
BstNSI RCATGY 2 cut(s) 1139, 1704
BstSCI CCNGG 3 cut(s) 794, 1012, 1990
BstSFI CTRYAG 3 cut(s) 546, 819, 1854
BstSLI GKGCMC 1 cut(s) 1102
BstUI CGCG 1 cut(s) 1684
BstV1I GCAGC 3 cut(s) 851, 1250, 1955
BstV2I GAAGAC 1 cut(s) 76
BstX2I RGATCY 5 cut(s) 649, 1024, 1163, 1877, 2116
BstYI RGATCY 5 cut(s) 649, 1024, 1163, 1877, 2116
BstZ17I GTATAC 1 cut(s) 61
BsuRI GGCC 5 cut(s) 87, 594, 742, 794, 2007
BtgZI GCGATG 1 cut(s) 113
BtsCI GGATG 2 cut(s) 1899, 2192
BtsI GCAGTG 3 cut(s) 543, 1471, 1581
BtsIMutI CAGTG 8 cut(s) 543, 937, 1264, 1420, 1471, 1581, 2047, 2218
Cac8I GCNNGC 6 cut(s) 596, 744, 1507, 1702, 1973, 2009
CaiI CAGNNNCTG 3 cut(s) 1028, 1422, 1543
CfoI GCGC 1 cut(s) 1788
Cfr13I GGNCC 1 cut(s) 1667
CseI GACGC 1 cut(s) 81
Csp6I GTAC 4 cut(s) 492, 502, 521, 1086
CspCI CAANNNNNGTGG 2 cut(s) 1291, 1326
CviQI GTAC 4 cut(s) 492, 502, 521, 1086
DdeI CTNAG 6 cut(s) 170, 324, 1231, 1360, 1636, 1821
DraI TTTAAA 1 cut(s) 688
DraIII CACNNNGTG 2 cut(s) 260, 1940
EaeI YGGCCR 2 cut(s) 592, 740
Eam1104I CTCTTC 2 cut(s) 1477, 2141
EarI CTCTTC 2 cut(s) 1477, 2141
Eco24I GRGCYC 1 cut(s) 1804
Eco31I GGTCTC 1 cut(s) 564
Eco32I GATATC 1 cut(s) 139
Eco47I GGWCC 1 cut(s) 1667
Eco57I CTGAAG 3 cut(s) 719, 801, 903
Eco72I CACGTG 1 cut(s) 449
EcoO109I RGGNCCY 1 cut(s) 1667
EcoRI GAATTC 1 cut(s) 230
EcoRII CCWGG 3 cut(s) 794, 1012, 1990
EcoRV GATATC 1 cut(s) 139
EcoT22I ATGCAT 2 cut(s) 1477, 1732
EcoT38I GRGCYC 1 cut(s) 1804
FalI AAGNNNNNCTT 2 cut(s) 1179, 1211
FauNDI CATATG 1 cut(s) 2168
FblI GTMKAC 2 cut(s) 60, 1380
Fnu4HI GCNGC 3 cut(s) 840, 1239, 1969
FokI GGATG 2 cut(s) 1886, 2179
FriOI GRGCYC 1 cut(s) 1804
Fsp4HI GCNGC 3 cut(s) 840, 1239, 1969
FspBI CTAG 6 cut(s) 518, 894, 1176, 1847, 1863, 2013
FspI TGCGCA 1 cut(s) 1787
GlaI GCGC 1 cut(s) 1787
GluI GCNGC 3 cut(s) 840, 1239, 1969
GsuI CTGGAG 3 cut(s) 809, 894, 1668
HaeIII GGCC 5 cut(s) 87, 594, 742, 794, 2007
HgaI GACGC 1 cut(s) 81
HhaI GCGC 1 cut(s) 1788
Hin6I GCGC 1 cut(s) 1786
HinP1I GCGC 1 cut(s) 1786
HincII GTYRAC 3 cut(s) 904, 1524, 1919
HindII GTYRAC 3 cut(s) 904, 1524, 1919
HinfI GANTC 6 cut(s) 166, 209, 974, 1218, 1496, 1835
HpaI GTTAAC 1 cut(s) 1524
HphI GGTGA 4 cut(s) 272, 346, 863, 2063
Hpy166II GTNNAC 9 cut(s) 61, 81, 263, 459, 904, 1100, 1381, 1524, 1919
Hpy188I TCNGA 8 cut(s) 566, 699, 922, 1330, 1545, 1561, 1735, 1824
Hpy8I GTNNAC 9 cut(s) 61, 81, 263, 459, 904, 1100, 1381, 1524, 1919
HpyAV CCTTC 9 cut(s) 35, 49, 305, 640, 694, 848, 1315, 1680, 1922
HpyCH4III ACNGT 9 cut(s) 94, 365, 469, 932, 1044, 1090, 1516, 2035, 2213
HpyCH4IV ACGT 2 cut(s) 448, 1921
HpyF10VI GCNNNNNNNGC 6 cut(s) 818, 1244, 1404, 1697, 1706, 2206
HpyF3I CTNAG 6 cut(s) 170, 324, 1231, 1360, 1636, 1821
HpySE526I ACGT 2 cut(s) 448, 1921
HspAI GCGC 1 cut(s) 1786
KspAI GTTAAC 1 cut(s) 1524
LguI GCTCTTC 1 cut(s) 2141
LmnI GCTCC 3 cut(s) 407, 514, 1649
Lsp1109I GCAGC 3 cut(s) 851, 1250, 1955
LweI GCATC 8 cut(s) 708, 943, 1326, 1462, 1484, 1717, 1739, 2209
MaeI CTAG 6 cut(s) 518, 894, 1176, 1847, 1863, 2013
MaeII ACGT 2 cut(s) 448, 1921
MaeIII GTNAC 5 cut(s) 241, 377, 431, 1858, 2026
MfeI CAATTG 3 cut(s) 318, 329, 2127
MflI RGATCY 5 cut(s) 649, 1024, 1163, 1877, 2116
MhlI GDGCHC 2 cut(s) 1102, 1804
MlsI TGGCCA 2 cut(s) 594, 742
MluNI TGGCCA 2 cut(s) 594, 742
MlyI GAGTC 2 cut(s) 968, 1505
Mox20I TGGCCA 2 cut(s) 594, 742
Mph1103I ATGCAT 2 cut(s) 1477, 1732
MroXI GAANNNNTTC 2 cut(s) 309, 1222
MscI TGGCCA 2 cut(s) 594, 742
MslI CAYNNNNRTG 1 cut(s) 200
Msp20I TGGCCA 2 cut(s) 594, 742
MspA1I CMGCKG 1 cut(s) 1241
MspR9I CCNGG 3 cut(s) 796, 1014, 1992
MunI CAATTG 3 cut(s) 318, 329, 2127
Mva1269I GAATGC 2 cut(s) 1995, 2181
MvaI CCWGG 3 cut(s) 796, 1014, 1992
MvnI CGCG 1 cut(s) 1684
MwoI GCNNNNNNNGC 6 cut(s) 818, 1244, 1404, 1697, 1706, 2206
NdeI CATATG 1 cut(s) 2168
NlaIV GGNNCC 6 cut(s) 46, 510, 651, 1165, 1246, 2059
NmuCI GTSAC 3 cut(s) 241, 377, 431
NsbI TGCGCA 1 cut(s) 1787
NsiI ATGCAT 2 cut(s) 1477, 1732
NspI RCATGY 2 cut(s) 1139, 1704
PaeI GCATGC 1 cut(s) 1704
PciI ACATGT 1 cut(s) 1135
PciSI GCTCTTC 1 cut(s) 2141
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PctI GAATGC 2 cut(s) 1995, 2181
PdmI GAANNNNTTC 2 cut(s) 309, 1222
PfeI GAWTC 4 cut(s) 166, 209, 1218, 1835
PflMI CCANNNNNTGG 1 cut(s) 2172
PkrI GCNGC 3 cut(s) 841, 1240, 1970
PleI GAGTC 2 cut(s) 968, 1504
PmaCI CACGTG 1 cut(s) 449
PmlI CACGTG 1 cut(s) 449
PpsI GAGTC 2 cut(s) 968, 1504
Ppu21I YACGTR 1 cut(s) 449
PpuMI RGGWCCY 1 cut(s) 1667
PscI ACATGT 1 cut(s) 1135
Psp5II RGGWCCY 1 cut(s) 1667
Psp6I CCWGG 3 cut(s) 794, 1012, 1990
PspCI CACGTG 1 cut(s) 449
PspGI CCWGG 3 cut(s) 794, 1012, 1990
PspN4I GGNNCC 6 cut(s) 46, 510, 651, 1165, 1246, 2059
PspPI GGNCC 1 cut(s) 1667
PspPPI RGGWCCY 1 cut(s) 1667
PstI CTGCAG 2 cut(s) 550, 823
PstNI CAGNNNCTG 3 cut(s) 1028, 1422, 1543
PsuI RGATCY 5 cut(s) 649, 1024, 1163, 1877, 2116
PvuII CAGCTG 1 cut(s) 1241
RsaI GTAC 4 cut(s) 493, 503, 522, 1087
RsaNI GTAC 4 cut(s) 492, 502, 521, 1086
RseI CAYNNNNRTG 1 cut(s) 200
SapI GCTCTTC 1 cut(s) 2141
SatI GCNGC 3 cut(s) 840, 1239, 1969
Sau96I GGNCC 1 cut(s) 1667
SchI GAGTC 2 cut(s) 968, 1505
ScrFI CCNGG 3 cut(s) 796, 1014, 1992
SduI GDGCHC 2 cut(s) 1102, 1804
SfaNI GCATC 8 cut(s) 708, 943, 1326, 1462, 1484, 1717, 1739, 2209
SfcI CTRYAG 3 cut(s) 546, 819, 1854
SinI GGWCC 1 cut(s) 1667
SmiMI CAYNNNNRTG 1 cut(s) 200
SmlI CTYRAG 2 cut(s) 1803, 1925
SmoI CTYRAG 2 cut(s) 1803, 1925
SpeI ACTAGT 2 cut(s) 517, 1846
SphI GCATGC 1 cut(s) 1704
SsiI CCGC 1 cut(s) 1772
SspI AATATT 2 cut(s) 397, 967
SspMI CTAG 6 cut(s) 518, 894, 1176, 1847, 1863, 2013
StyD4I CCNGG 3 cut(s) 794, 1012, 1990
TaaI ACNGT 9 cut(s) 94, 365, 469, 932, 1044, 1090, 1516, 2035, 2213
TaiI ACGT 2 cut(s) 451, 1924
TaqI TCGA 4 cut(s) 9, 1062, 1745, 1810
TatI WGTACW 1 cut(s) 501
TfiI GAWTC 4 cut(s) 166, 209, 1218, 1835
TscAI CASTG 8 cut(s) 550, 937, 1264, 1427, 1471, 1581, 2047, 2218
TseFI GTSAC 3 cut(s) 241, 377, 431
TseI GCWGC 3 cut(s) 839, 1238, 1968
Tsp45I GTSAC 3 cut(s) 241, 377, 431
TspRI CASTG 8 cut(s) 550, 937, 1264, 1427, 1471, 1581, 2047, 2218
Van91I CCANNNNNTGG 1 cut(s) 2172
VneI GTGCAC 1 cut(s) 1098
VpaK11BI GGWCC 1 cut(s) 1667
XapI RAATTY 7 cut(s) 104, 230, 273, 613, 682, 1056, 1287
XceI RCATGY 2 cut(s) 1139, 1704
XcmI CCANNNNNNNNNTGG 2 cut(s) 875, 1309
XmiI GTMKAC 2 cut(s) 60, 1380
XmnI GAANNNNTTC 2 cut(s) 309, 1222
XspI CTAG 6 cut(s) 518, 894, 1176, 1847, 1863, 2013
Zsp2I ATGCAT 2 cut(s) 1477, 1732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.