Rw2G053140

Glucuronokinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
80987466 .. 80990226
2761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G053140.1

Sequence Viewer

Length: 1104 bp
ATGGATCATCATCATCATGATCAGAATAGCGAAACGGCGTCGTCGGAGCCGGCGGCCATAGAGCACAGGGCCTACGCCAGGGTGGGTCTGCTCGGCAACCCCAGCGATGTCTACTACGGCCGCACGATCTCTTTCAGCCTCGGCAACTTCTGGGCCTCCGTCCGATTACACCCCTCCGATGACCTCGTCATCCAGCCCCACCCCACCCACGACCTCGTCGTCTTCAGATCTCTCCCCCACCTGGTGAATCGGCTAGACAATGAGGGTTATTATGGCGGTGTTCGATTACTGATGGCGATTTGCAAAGTGTTTTTTGATTATTGCAAGGAAAAAGAGATCCATCTGGACTCGAGAAACTTCACTCTCTCATATGATACTAATATCCCTCGCCAGATGGGACTATCGGGGTCTAGTGCTATTGTGTGTGCAGCCCTTAGCTGCCTTCTTGACTTCTACAAGGTTAGGCATTTGATCAAAGTGGAGGTCAGGCCTGGCATTGTCCTCGGCGCGGAGAAACAGCTCGGCATTGTTGCTGGTCTTCAAGATCGGGTTGCACAGGTTTATGGAGGCCTTGTTTACATGGAATTTGATAAGGAACACATGGATACTTTGGGGCATGGCATTTACACACCCATGGATGTTTGTCTTCTGCCGCCTCTATATCTCATATATGCCGAGAATCCAAGCGATTCTGGGAAGGTACACAGTACAGTTCGCCAAAGGTGGCTCAATGGCGATGAGTTTATAATATCATCAATGAAAGAAGTAGCAGATATTGCACAAGAAGGAAGGAAAGCCTTACTCGAAAAGGACTACACTAAACTAGCAGCTCTCATGAACTCTAATTTTGATCTTAGAAGACGCATGTTTGGAGATGACGCTCTTGGTGCTTTAAACATAGAAATGGTAGAGGTCGCCCGAAGGGTGGGTGCAGCCTCGAAATTCACAGGTAGTGGAGGAGCTGTGGTTGTATTTTGCCCTGATGGTCCTTCACAAGTGAAGCTATTAGAGGATGCATGTCTAAGCGCCGGTTTTAAATTAGAACCAATTAAAGTTATTCCCTCCCTTCTAAATGAGGTTGATCTTCAAACCCTGTCAAAATAA

Protein Analysis

367

Amino Acids

40.73

Weight (kDa)

5.96

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GHMP_kinases_N PF00288 112 - 190 3.9e-09 GHMP kinases N terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010934)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 746
AasI GACNNNNNNGTC 1 cut(s) 218
AccI GTMKAC 1 cut(s) 111
AccII CGCG 1 cut(s) 509
AciI CCGC 5 cut(s) 53, 121, 276, 509, 653
AclWI GGATC 2 cut(s) 12, 331
AcoI YGGCCR 2 cut(s) 54, 118
AcsI RAATTY 2 cut(s) 584, 941
AcuI CTGAAG 1 cut(s) 208
AcyI GRCGYC 1 cut(s) 38
AdeI CACNNNGTG 1 cut(s) 244
AfaI GTAC 2 cut(s) 702, 709
AfiI CCNNNNNNNGG 4 cut(s) 78, 241, 508, 925
AgsI TTSAA 2 cut(s) 542, 1088
AjnI CCWGG 3 cut(s) 77, 240, 490
AluBI AGCT 5 cut(s) 438, 520, 830, 962, 1003
AluI AGCT 5 cut(s) 438, 520, 830, 962, 1003
Alw21I GWGCWC 1 cut(s) 66
AlwI GGATC 2 cut(s) 12, 331
Ama87I CYCGRG 1 cut(s) 349
AoxI GGCC 6 cut(s) 54, 69, 118, 153, 488, 568
ApeKI GCWGC 4 cut(s) 428, 438, 827, 932
ApoI RAATTY 2 cut(s) 584, 941
ArsI GACNNNNNNTTYG 2 cut(s) 468, 500
AspLEI GCGC 2 cut(s) 509, 1028
AspS9I GGNCC 3 cut(s) 69, 153, 986
AsuHPI GGTGA 1 cut(s) 256
AvaI CYCGRG 1 cut(s) 349
AvaII GGWCC 1 cut(s) 986
BbsI GAAGAC 4 cut(s) 214, 530, 638, 865
Bbv12I GWGCWC 1 cut(s) 66
BbvI GCAGC 4 cut(s) 425, 440, 839, 944
BccI CCATC 4 cut(s) 286, 348, 388, 977
BceAI ACGGC 2 cut(s) 51, 133
BcgI CGANNNNNNTGC 2 cut(s) 484, 518
BciT130I CCWGG 3 cut(s) 79, 242, 492
BciVI GTATCC 1 cut(s) 598
BclI TGATCA 2 cut(s) 19, 471
BfaI CTAG 3 cut(s) 254, 411, 824
BfoI RGCGCY 1 cut(s) 1029
BfuI GTATCC 1 cut(s) 598
BglII AGATCT 1 cut(s) 227
BisI GCNGC 7 cut(s) 54, 121, 429, 439, 653, 828, 933
BlsI GCNGC 7 cut(s) 55, 122, 430, 440, 654, 829, 934
Bme1390I CCNGG 3 cut(s) 79, 242, 492
Bme18I GGWCC 1 cut(s) 986
BmeT110I CYCGRG 1 cut(s) 349
BmgT120I GGNCC 3 cut(s) 69, 153, 986
BmiI GGNNCC 1 cut(s) 48
BmrFI CCNGG 3 cut(s) 79, 242, 492
BmsI GCATC 1 cut(s) 1003
BpiI GAAGAC 4 cut(s) 214, 530, 638, 865
Bpu10I CCTNAGC 1 cut(s) 434
BsaBI GATNNNNATC 1 cut(s) 9
BsaHI GRCGYC 1 cut(s) 38
BsaJI CCNNGG 4 cut(s) 78, 139, 502, 633
BsaXI ACNNNNNCTCC 6 cut(s) 558, 588, 948, 951, 978, 981
Bsc4I CCNNNNNNNGG 4 cut(s) 78, 241, 508, 925
Bse118I RCCGGY 2 cut(s) 49, 1028
Bse8I GATNNNNATC 1 cut(s) 9
BseBI CCWGG 3 cut(s) 79, 242, 492
BseDI CCNNGG 4 cut(s) 78, 139, 502, 633
BseGI GGATG 3 cut(s) 189, 643, 1018
BseJI GATNNNNATC 1 cut(s) 9
BseLI CCNNNNNNNGG 4 cut(s) 78, 241, 508, 925
BseRI GAGGAG 1 cut(s) 972
BseX3I CGGCCG 1 cut(s) 118
BseXI GCAGC 4 cut(s) 425, 440, 839, 944
BseYI CCCAGC 1 cut(s) 101
BsgI GTGCAG 2 cut(s) 447, 951
Bsh1236I CGCG 1 cut(s) 509
Bsh1285I CGRYCG 1 cut(s) 121
BshFI GGCC 6 cut(s) 56, 71, 120, 155, 490, 570
BsiEI CGRYCG 1 cut(s) 121
BsiHKAI GWGCWC 1 cut(s) 66
BsiHKCI CYCGRG 1 cut(s) 349
BsiSI CCGG 2 cut(s) 50, 1029
BslFI GGGAC 1 cut(s) 411
BslI CCNNNNNNNGG 4 cut(s) 78, 241, 508, 925
BsmFI GGGAC 1 cut(s) 411
BsnI GGCC 6 cut(s) 56, 71, 120, 155, 490, 570
BsoBI CYCGRG 1 cut(s) 349
Bsp1286I GDGCHC 1 cut(s) 66
Bsp143I GATC 9 cut(s) 4, 19, 126, 227, 336, 471, 544, 850, 1081
Bsp19I CCATGG 1 cut(s) 633
BspACI CCGC 5 cut(s) 53, 121, 276, 509, 653
BspANI GGCC 6 cut(s) 56, 71, 120, 155, 490, 570
BspFNI CGCG 1 cut(s) 509
BspHI TCATGA 2 cut(s) 16, 834
BspLI GGNNCC 1 cut(s) 48
BspPI GGATC 2 cut(s) 12, 331
BsrFI RCCGGY 2 cut(s) 49, 1028
BssAI RCCGGY 2 cut(s) 49, 1028
BssECI CCNNGG 4 cut(s) 78, 139, 502, 633
BssMI GATC 9 cut(s) 4, 19, 126, 227, 336, 471, 544, 850, 1081
BssNI GRCGYC 1 cut(s) 38
BssT1I CCWWGG 1 cut(s) 633
Bst2UI CCWGG 3 cut(s) 79, 242, 492
Bst4CI ACNGT 2 cut(s) 707, 712
BstACI GRCGYC 1 cut(s) 38
BstAPI GCANNNNNTGC 1 cut(s) 776
BstC8I GCNNGC 1 cut(s) 51
BstDEI CTNAG 3 cut(s) 434, 854, 1022
BstDSI CCRYGG 1 cut(s) 633
BstENI CCTNNNNNAGG 1 cut(s) 76
BstF5I GGATG 3 cut(s) 189, 643, 1018
BstFNI CGCG 1 cut(s) 509
BstH2I RGCGCY 1 cut(s) 1029
BstHHI GCGC 2 cut(s) 509, 1028
BstKTI GATC 9 cut(s) 7, 22, 129, 230, 339, 474, 547, 853, 1084
BstMBI GATC 9 cut(s) 4, 19, 126, 227, 336, 471, 544, 850, 1081
BstMCI CGRYCG 1 cut(s) 121
BstMWI GCNNNNNNNGC 3 cut(s) 102, 776, 887
BstNI CCWGG 3 cut(s) 79, 242, 492
BstNSI RCATGY 2 cut(s) 868, 1020
BstSCI CCNGG 3 cut(s) 77, 240, 490
BstUI CGCG 1 cut(s) 509
BstV1I GCAGC 4 cut(s) 425, 440, 839, 944
BstV2I GAAGAC 4 cut(s) 214, 530, 638, 865
BstX2I RGATCY 2 cut(s) 227, 336
BstYI RGATCY 2 cut(s) 227, 336
BstZI CGGCCG 1 cut(s) 118
BsuI GTATCC 1 cut(s) 598
BsuRI GGCC 6 cut(s) 56, 71, 120, 155, 490, 570
BtgI CCRYGG 1 cut(s) 633
BtgZI GCGATG 2 cut(s) 120, 750
BtsCI GGATG 3 cut(s) 189, 643, 1018
Cac8I GCNNGC 1 cut(s) 51
CciI TCATGA 2 cut(s) 16, 834
CfoI GCGC 2 cut(s) 509, 1028
Cfr10I RCCGGY 2 cut(s) 49, 1028
Cfr13I GGNCC 3 cut(s) 69, 153, 986
CseI GACGC 3 cut(s) 27, 870, 887
CsiI ACCWGGT 1 cut(s) 240
Csp6I GTAC 2 cut(s) 701, 708
CviAII CATG 8 cut(s) 17, 580, 601, 617, 634, 835, 865, 1017
CviQI GTAC 2 cut(s) 701, 708
DdeI CTNAG 3 cut(s) 434, 854, 1022
DpnI GATC 9 cut(s) 6, 21, 128, 229, 338, 473, 546, 852, 1083
DpnII GATC 9 cut(s) 4, 19, 126, 227, 336, 471, 544, 850, 1081
DraI TTTAAA 2 cut(s) 894, 1036
DraIII CACNNNGTG 1 cut(s) 244
DrdI GACNNNNNNGTC 1 cut(s) 218
DseDI GACNNNNNNGTC 1 cut(s) 218
EaeI YGGCCR 2 cut(s) 54, 118
EagI CGGCCG 1 cut(s) 118
EclXI CGGCCG 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 633
Eco147I AGGCCT 2 cut(s) 490, 570
Eco47I GGWCC 1 cut(s) 986
Eco52I CGGCCG 1 cut(s) 118
Eco57I CTGAAG 1 cut(s) 208
Eco88I CYCGRG 1 cut(s) 349
EcoNI CCTNNNNNAGG 1 cut(s) 76
EcoO109I RGGNCCY 1 cut(s) 69
EcoRII CCWGG 3 cut(s) 77, 240, 490
EcoT14I CCWWGG 1 cut(s) 633
EcoT22I ATGCAT 1 cut(s) 1018
ErhI CCWWGG 1 cut(s) 633
FaeI CATG 8 cut(s) 20, 583, 604, 620, 637, 838, 868, 1020
FaqI GGGAC 1 cut(s) 411
FatI CATG 8 cut(s) 16, 579, 600, 616, 633, 834, 864, 1016
FauNDI CATATG 1 cut(s) 370
FbaI TGATCA 2 cut(s) 19, 471
FblI GTMKAC 1 cut(s) 111
Fnu4HI GCNGC 7 cut(s) 54, 121, 429, 439, 653, 828, 933
FokI GGATG 3 cut(s) 176, 650, 1025
Fsp4HI GCNGC 7 cut(s) 54, 121, 429, 439, 653, 828, 933
FspBI CTAG 3 cut(s) 254, 411, 824
GlaI GCGC 2 cut(s) 508, 1027
GluI GCNGC 7 cut(s) 54, 121, 429, 439, 653, 828, 933
GsaI CCCAGC 1 cut(s) 105
HaeII RGCGCY 1 cut(s) 1029
HaeIII GGCC 6 cut(s) 56, 71, 120, 155, 490, 570
HapII CCGG 2 cut(s) 50, 1029
HgaI GACGC 3 cut(s) 27, 870, 887
HhaI GCGC 2 cut(s) 509, 1028
Hin1I GRCGYC 1 cut(s) 38
Hin1II CATG 8 cut(s) 20, 583, 604, 620, 637, 838, 868, 1020
Hin6I GCGC 2 cut(s) 507, 1026
HinP1I GCGC 2 cut(s) 507, 1026
HinfI GANTC 4 cut(s) 247, 347, 679, 689
HpaII CCGG 2 cut(s) 50, 1029
HphI GGTGA 1 cut(s) 256
Hpy166II GTNNAC 3 cut(s) 112, 577, 703
Hpy188I TCNGA 5 cut(s) 24, 46, 164, 178, 227
Hpy188III TCNNGA 6 cut(s) 17, 344, 351, 446, 542, 835
Hpy8I GTNNAC 3 cut(s) 112, 577, 703
Hpy99I CGWCG 3 cut(s) 43, 46, 221
HpyAV CCTTC 7 cut(s) 452, 691, 779, 783, 915, 999, 1076
HpyCH4III ACNGT 2 cut(s) 707, 712
HpyCH4V TGCA 7 cut(s) 303, 324, 428, 554, 779, 932, 1016
HpyF10VI GCNNNNNNNGC 3 cut(s) 102, 776, 887
HpyF3I CTNAG 3 cut(s) 434, 854, 1022
Hsp92I GRCGYC 1 cut(s) 38
Hsp92II CATG 8 cut(s) 20, 583, 604, 620, 637, 838, 868, 1020
HspAI GCGC 2 cut(s) 507, 1026
KroI GCCGGC 1 cut(s) 49
KroNI GCCGGC 1 cut(s) 51
Ksp22I TGATCA 2 cut(s) 19, 471
Kzo9I GATC 9 cut(s) 4, 19, 126, 227, 336, 471, 544, 850, 1081
LmnI GCTCC 2 cut(s) 46, 959
Lsp1109I GCAGC 4 cut(s) 425, 440, 839, 944
LweI GCATC 1 cut(s) 1003
MabI ACCWGGT 1 cut(s) 240
MaeI CTAG 3 cut(s) 254, 411, 824
MalI GATC 9 cut(s) 6, 21, 128, 229, 338, 473, 546, 852, 1083
MboI GATC 9 cut(s) 4, 19, 126, 227, 336, 471, 544, 850, 1081
MboII GAAGA 5 cut(s) 214, 530, 638, 870, 1076
MflI RGATCY 2 cut(s) 227, 336
MhlI GDGCHC 1 cut(s) 66
MluCI AATT 5 cut(s) 584, 844, 941, 1037, 1047
MlyI GAGTC 1 cut(s) 341
MmeI TCCRAC 1 cut(s) 24
Mph1103I ATGCAT 1 cut(s) 1018
MroNI GCCGGC 1 cut(s) 49
MseI TTAA 3 cut(s) 893, 1035, 1050
MslI CAYNNNNRTG 3 cut(s) 15, 632, 902
MspI CCGG 2 cut(s) 50, 1029
MspR9I CCNGG 3 cut(s) 79, 242, 492
MvaI CCWGG 3 cut(s) 79, 242, 492
MvnI CGCG 1 cut(s) 509
MwoI GCNNNNNNNGC 3 cut(s) 102, 776, 887
NaeI GCCGGC 1 cut(s) 51
NcoI CCATGG 1 cut(s) 633
NdeI CATATG 1 cut(s) 370
NdeII GATC 9 cut(s) 4, 19, 126, 227, 336, 471, 544, 850, 1081
NgoMIV GCCGGC 1 cut(s) 49
NlaIII CATG 8 cut(s) 20, 583, 604, 620, 637, 838, 868, 1020
NlaIV GGNNCC 1 cut(s) 48
NmeAIII GCCGAG 5 cut(s) 72, 120, 483, 501, 700
NsiI ATGCAT 1 cut(s) 1018
NspI RCATGY 2 cut(s) 868, 1020
PaeR7I CTCGAG 1 cut(s) 349
PagI TCATGA 2 cut(s) 16, 834
PceI AGGCCT 2 cut(s) 490, 570
PcsI WCGNNNNNNNCGW 1 cut(s) 216
PdiI GCCGGC 1 cut(s) 51
PfeI GAWTC 3 cut(s) 247, 679, 689
PflFI GACNNNGTC 2 cut(s) 185, 215
PkrI GCNGC 7 cut(s) 55, 122, 430, 440, 654, 829, 934
PleI GAGTC 1 cut(s) 341
PpsI GAGTC 1 cut(s) 341
PsiI TTATAA 1 cut(s) 746
Psp6I CCWGG 3 cut(s) 77, 240, 490
PspFI CCCAGC 1 cut(s) 101
PspGI CCWGG 3 cut(s) 77, 240, 490
PspN4I GGNNCC 1 cut(s) 48
PspPI GGNCC 3 cut(s) 69, 153, 986
PsuI RGATCY 2 cut(s) 227, 336
PsyI GACNNNGTC 2 cut(s) 185, 215
RsaI GTAC 2 cut(s) 702, 709
RsaNI GTAC 2 cut(s) 701, 708
RseI CAYNNNNRTG 3 cut(s) 15, 632, 902
SaqAI TTAA 3 cut(s) 893, 1035, 1050
SatI GCNGC 7 cut(s) 54, 121, 429, 439, 653, 828, 933
Sau3AI GATC 9 cut(s) 4, 19, 126, 227, 336, 471, 544, 850, 1081
Sau96I GGNCC 3 cut(s) 69, 153, 986
SchI GAGTC 1 cut(s) 341
ScrFI CCNGG 3 cut(s) 79, 242, 492
SduI GDGCHC 1 cut(s) 66
SexAI ACCWGGT 1 cut(s) 240
SfaNI GCATC 1 cut(s) 1003
Sfr274I CTCGAG 1 cut(s) 349
SinI GGWCC 1 cut(s) 986
SlaI CTCGAG 1 cut(s) 349
SmiMI CAYNNNNRTG 3 cut(s) 15, 632, 902
SmlI CTYRAG 1 cut(s) 349
SmoI CTYRAG 1 cut(s) 349
Sse9I AATT 5 cut(s) 584, 844, 941, 1037, 1047
SseBI AGGCCT 2 cut(s) 490, 570
SsiI CCGC 5 cut(s) 53, 121, 276, 509, 653
SspMI CTAG 3 cut(s) 254, 411, 824
StuI AGGCCT 2 cut(s) 490, 570
StyD4I CCNGG 3 cut(s) 77, 240, 490
StyI CCWWGG 1 cut(s) 633
TaaI ACNGT 2 cut(s) 707, 712
TaqI TCGA 4 cut(s) 283, 350, 804, 938
TasI AATT 5 cut(s) 584, 844, 941, 1037, 1047
TatI WGTACW 1 cut(s) 707
TauI GCSGC 3 cut(s) 56, 123, 655
TfiI GAWTC 3 cut(s) 247, 679, 689
Tru1I TTAA 3 cut(s) 893, 1035, 1050
Tru9I TTAA 3 cut(s) 893, 1035, 1050
TseI GCWGC 4 cut(s) 428, 438, 827, 932
TspDTI ATGAA 2 cut(s) 773, 851
TspGWI ACGGA 1 cut(s) 148
Tth111I GACNNNGTC 2 cut(s) 185, 215
VpaK11BI GGWCC 1 cut(s) 986
XagI CCTNNNNNAGG 1 cut(s) 76
XapI RAATTY 2 cut(s) 584, 941
XceI RCATGY 2 cut(s) 868, 1020
XhoI CTCGAG 1 cut(s) 349
XmiI GTMKAC 1 cut(s) 111
XspI CTAG 3 cut(s) 254, 411, 824
Zsp2I ATGCAT 1 cut(s) 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.