proline--tRNA ligase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD08G1148500.v1.1 |
| pyrus_communis | pycom07g12970 |
| rosa_chinensis | RchiOBHm_Chr1g0313171 RchiOBHm_Chr5g0080771 RchiOBHm_Chr6g0261551 RchiOBHm_Chr6g0261561 RchiOBHm_Chr6g0283351 |
| rosa_multiflora | Rmu_sc0006634.1_g000006 Rmu_ssc0000066.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00321550 Rroxscaffold_5G00353030 Rroxscaffold_7G00162120 |
| rosa_samantha | Rh1DG264100 Rh4AG050100 Rh4AG050200 Rh6DG261500 |
| rosa_wichuraiana | Rw4G014170 Rw4G015360 Rw5G032300 Rw5G042170 Rw5G042180 Rw7G036200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 354 |
| AcsI | RAATTY | 1 cut(s) | 139 |
| AgeI | ACCGGT | 1 cut(s) | 11 |
| AgsI | TTSAA | 2 cut(s) | 188, 364 |
| Alw26I | GTCTC | 2 cut(s) | 239, 322 |
| AlwI | GGATC | 1 cut(s) | 354 |
| AoxI | GGCC | 2 cut(s) | 109, 221 |
| ApoI | RAATTY | 1 cut(s) | 139 |
| AsiGI | ACCGGT | 1 cut(s) | 11 |
| AsuHPI | GGTGA | 4 cut(s) | 26, 55, 106, 188 |
| BcoDI | GTCTC | 2 cut(s) | 239, 322 |
| BmsI | GCATC | 1 cut(s) | 256 |
| BsaI | GGTCTC | 1 cut(s) | 239 |
| BsaJI | CCNNGG | 3 cut(s) | 39, 112, 224 |
| BsaWI | WCCGGW | 1 cut(s) | 11 |
| Bse118I | RCCGGY | 2 cut(s) | 11, 107 |
| Bse3DI | GCAATG | 1 cut(s) | 33 |
| BseDI | CCNNGG | 3 cut(s) | 39, 112, 224 |
| BseGI | GGATG | 1 cut(s) | 139 |
| BseMI | GCAATG | 1 cut(s) | 33 |
| BshFI | GGCC | 2 cut(s) | 111, 223 |
| BshTI | ACCGGT | 1 cut(s) | 11 |
| BsiSI | CCGG | 2 cut(s) | 12, 108 |
| BsmAI | GTCTC | 2 cut(s) | 239, 322 |
| BsmBI | CGTCTC | 1 cut(s) | 322 |
| BsmI | GAATGC | 1 cut(s) | 257 |
| BsnI | GGCC | 2 cut(s) | 111, 223 |
| Bso31I | GGTCTC | 1 cut(s) | 239 |
| Bsp143I | GATC | 1 cut(s) | 346 |
| Bsp19I | CCATGG | 1 cut(s) | 224 |
| BspANI | GGCC | 2 cut(s) | 111, 223 |
| BspPI | GGATC | 1 cut(s) | 354 |
| BspTNI | GGTCTC | 1 cut(s) | 239 |
| BsrDI | GCAATG | 1 cut(s) | 33 |
| BsrFI | RCCGGY | 2 cut(s) | 11, 107 |
| BssAI | RCCGGY | 2 cut(s) | 11, 107 |
| BssECI | CCNNGG | 3 cut(s) | 39, 112, 224 |
| BssMI | GATC | 1 cut(s) | 346 |
| BssT1I | CCWWGG | 2 cut(s) | 39, 224 |
| BstC8I | GCNNGC | 1 cut(s) | 255 |
| BstDSI | CCRYGG | 1 cut(s) | 224 |
| BstF5I | GGATG | 1 cut(s) | 139 |
| BstKTI | GATC | 1 cut(s) | 349 |
| BstMAI | GTCTC | 2 cut(s) | 239, 322 |
| BstMBI | GATC | 1 cut(s) | 346 |
| BsuRI | GGCC | 2 cut(s) | 111, 223 |
| BtgI | CCRYGG | 1 cut(s) | 224 |
| BtsCI | GGATG | 1 cut(s) | 139 |
| Cac8I | GCNNGC | 1 cut(s) | 255 |
| Cfr10I | RCCGGY | 2 cut(s) | 11, 107 |
| CspAI | ACCGGT | 1 cut(s) | 11 |
| CviAII | CATG | 3 cut(s) | 56, 225, 250 |
| CviJI | RGCY | 4 cut(s) | 5, 25, 111, 223 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 25, 111, 223 |
| DpnI | GATC | 1 cut(s) | 348 |
| DpnII | GATC | 1 cut(s) | 346 |
| Eco130I | CCWWGG | 2 cut(s) | 39, 224 |
| Eco31I | GGTCTC | 1 cut(s) | 239 |
| EcoT14I | CCWWGG | 2 cut(s) | 39, 224 |
| ErhI | CCWWGG | 2 cut(s) | 39, 224 |
| Esp3I | CGTCTC | 1 cut(s) | 322 |
| FaeI | CATG | 3 cut(s) | 59, 228, 253 |
| FaiI | YATR | 9 cut(s) | 57, 195, 200, 213, 226, 241, 251, 351, 353 |
| FatI | CATG | 3 cut(s) | 55, 224, 249 |
| FokI | GGATG | 1 cut(s) | 146 |
| HaeIII | GGCC | 2 cut(s) | 111, 223 |
| HapII | CCGG | 2 cut(s) | 12, 108 |
| Hin1II | CATG | 3 cut(s) | 59, 228, 253 |
| HpaII | CCGG | 2 cut(s) | 12, 108 |
| HphI | GGTGA | 4 cut(s) | 26, 55, 106, 188 |
| Hpy188I | TCNGA | 2 cut(s) | 120, 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 332 |
| HpyAV | CCTTC | 3 cut(s) | 82, 124, 337 |
| HpyCH4V | TGCA | 2 cut(s) | 253, 269 |
| Hsp92II | CATG | 3 cut(s) | 59, 228, 253 |
| Kzo9I | GATC | 1 cut(s) | 346 |
| LpnPI | CCDG | 5 cut(s) | 25, 121, 189, 317, 336 |
| LweI | GCATC | 1 cut(s) | 256 |
| MaeIII | GTNAC | 1 cut(s) | 14 |
| MalI | GATC | 1 cut(s) | 348 |
| MboI | GATC | 1 cut(s) | 346 |
| MboII | GAAGA | 6 cut(s) | 94, 97, 109, 139, 253, 298 |
| MluCI | AATT | 2 cut(s) | 139, 295 |
| MnlI | CCTC | 6 cut(s) | 53, 85, 122, 154, 213, 349 |
| MseI | TTAA | 1 cut(s) | 291 |
| MslI | CAYNNNNRTG | 1 cut(s) | 60 |
| MspI | CCGG | 2 cut(s) | 12, 108 |
| Mva1269I | GAATGC | 1 cut(s) | 257 |
| NcoI | CCATGG | 1 cut(s) | 224 |
| NdeII | GATC | 1 cut(s) | 346 |
| NlaIII | CATG | 3 cut(s) | 59, 228, 253 |
| NmuCI | GTSAC | 1 cut(s) | 14 |
| PctI | GAATGC | 1 cut(s) | 257 |
| PinAI | ACCGGT | 1 cut(s) | 11 |
| RseI | CAYNNNNRTG | 1 cut(s) | 60 |
| SaqAI | TTAA | 1 cut(s) | 291 |
| Sau3AI | GATC | 1 cut(s) | 346 |
| SetI | ASST | 4 cut(s) | 45, 64, 96, 165 |
| SfaNI | GCATC | 1 cut(s) | 256 |
| SgrAI | CRCCGGYG | 1 cut(s) | 11 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 60 |
| Sse9I | AATT | 2 cut(s) | 139, 295 |
| StyI | CCWWGG | 2 cut(s) | 39, 224 |
| TaqI | TCGA | 1 cut(s) | 264 |
| TaqII | GACCGA | 1 cut(s) | 104 |
| TasI | AATT | 2 cut(s) | 139, 295 |
| Tru1I | TTAA | 1 cut(s) | 291 |
| Tru9I | TTAA | 1 cut(s) | 291 |
| TseFI | GTSAC | 1 cut(s) | 14 |
| Tsp45I | GTSAC | 1 cut(s) | 14 |
| TspDTI | ATGAA | 1 cut(s) | 299 |
| XapI | RAATTY | 1 cut(s) | 139 |