AT1G01320

Translation initiation factor eIF3 subunit 135

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007431
Physical Location & Seq
Reverse (-)
121067 .. 130577
9511 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G01320.3

Sequence Viewer

Length: 5394 bp
ATGGCTCCCAAGAACAACCGTGGAAAGACAAAAGGAGATAAGAAGAAGAAGGAAGAGAAAGTTCTCCCGGTTATCGTGGATGTCATTGTAAACCTTCCGGATGAAACGGAGGCTATTTTGAAGGGCATATCAACGGACAGGATCATAGATGTTCGGCGGCTGTTATCGGTTAACTTCGACACCTGCCACGTCACCAATTATTCGCTCTCCCATGAGATAAGAGGATCGCGGTTAAAAGACACAGTGGATGTGTCGGCCCTTAAACCCTGTGTTCTCACGTTAACGGAAGAGGATTACAATGAAGGAACAGCAGTGGCGCACGTTAGACGGCTGCTTGACATCGTCGCCTGTACCACTTGCTTCGGTCCGTCGCCGGAGAAATCAGACTCCGTGAAAAGTGCGCAGGTTAAGGGAGGTGGAAAGAATTCTAAACAGTCGGATACGTCGCCTCCGCCGTCTCCTGCGTCGAAGGATACTGTGGTTGATGAAGCCGGAGAGACTAGCCACTCTTTCCCTAAGCTTGGAAGTTTCTACGAGTTTTTCTCTCTCGCTCATCTCACTCCTCCTCTTCAATATATTCGGCTCGCGACTAAGCGGGAAACTGAAGATATAGCCAAGGAAGATCATCTTCTCTCCATTGATGTGAAGCTTTGTAATGGGAAGCTCGTTCATATTGAAGGTTGCAGAAAAGGATTTTACAGCATTGGGAAACAAAGAATAATATGTCACAATCTTGTTGATTTGCTTAGACAAATCAGTAGAGCCTTCGATAATGCTTACAGTGATCTTCTGAAAGCATTTTCGGAGCGCAATAAGTTTGGAAATCTTCCATATGGGTTTAGAGCTAACACATGGCTCATCCCGCCTACTGCGGCGCAGTCACCAGCAGCGTTTCCGCCTCTCCCTGTTGAGGATGAGAGATGGGGAGGGGATGGTGGTGGTCAAGGGAGAGATGGCAGCTACGACTTGGTTCCATGGTCCAACGAATTCGCCTTTATCGCATCTATGCCTTGCAAAACAGCAGAGGAGAGACAAGTCAGAGACAGAAAAGTGTTTCTTCTTCACAACCTCTTTGTTGATGTCGCGACTTTCAGAGCCATCAAGGCTGTTCAGAAAGTAATGGCTGAGCCAGTACTGGCTGAAGAAGACTCCGAAGTTCTCTATTCCGAGACAGTTAGAGACTTGACTGTTACGGTTACAAGGGATACTTCAAATGCAAGTAGTAAAGTGGATACAAAAATCGATGGAATTCAAGCCACTGGTTTGGATAAAAAGAAGCTGATGGAACGGAACCTTCTCAAGGGACTTACAGCTGATGAAAATACTGCTGCTCATGACGTTGCTACTTTAGGAACTATAAGTCTTAAGTACTGTGGTTACATTGCTGTTGTGAAATTAGAGAAGGAGAGTGAGGAGTTAAGCCCACCTTCTCAAATTGTTGACCTCCTTGAACAGCCTGAAGGTGGTGCTAATGCTCTAAATATCAATAGTTTGAGATTCCTTCTCCATAAATCCTCTCCTGAGCAGAACAAGAAAACACCTCAGCAACACGATGATGAACTTACATCTTCACGGGAATTTGTAAGTAAAATGCTGGAAGAAAGCATTGCTAAGCTTGAGGGAGAGGAGATAGACAGGGATAGTATCATGAGATGGGAGCTTGGAGCTTGTTGGATACAGCATTTACAAGACCAAAAGAATACAGAAAAGGACAAAAAACAAACCGGTGAAAAGTCTAAGAATGAATTGAAGGTTGAAGGGCTTGGGAAACCGCTTAAGTCCCTCAATAGCAGCAAAAAGAAAACAGATGTGAGCAGCCCTAAGACGCCGCAGACTGCATTATCGTCTCAAGTCGATGCGGTTTCTTCAGAGGCTGATACTGCTGCATCTTTGCAATCCGATGCTGAGAAGAATGCTCAAGAAAATGTGCTCATCTTGAAGAATTTGTTGTCTGATGCAGCCTTCACTCGCCTAAAAGAGTCAGATACTGGACTTCATCACAAGTCTTTGCAAGAACTTGTCGACTTGGCACAGAATTATTATACTGAAGTTGCTATTCCGAAACTGGTTGCAGATTTTGGTTCATTGGAGCTCTCCCCAGTCGATGGCCGGACTCTAACTGATTTTATGCACACAAGAGGTCTTCGGATGCGTTCTTTAGGATATGTTGTGAAGCTTTCAGATAAATTGTCACATGTACAATCGCTGTGTGTTCATGAGATGATAGTAAGAGCCCTTAAGCATATCCTCCAGGCGGTGATTTCTGCTGTTGCTACTGACACTGACAAAATAGCTATAAAAGTAGCTGCTGCTTTGAACATGATGCTTGGGATTCCTGAAAATGTTGCAGCAACACCACATAACCCTTGGAATGTACATCCTCTGATCTTCCGATGGTTGGAGAAATTCTTGAAGAAACGGTATGATTATGATCTTAATGCCTTCAGTTACAAGGATCTACGGAAGTTTGCCATTCTCCGAGGCTTATGCCATAAGGTTGGTATTGAGTTGATTCCAAGGGACTTTGACATGGATTCTCCTGCACCTTTCCGGAAAACAGATGTGGTTAGTCTTGTCCCAGTGCATAAGACTTTCTATTTTAAATCTATGCAGCAAGCAGCATGTTCATCTGCTGATGGAAGGCAACTTCTGGAGTCATCTAAAACAGCTTTAGACAAAGGAAAGCTTGAAGATGCAGTTACATATGGAACGAAGGCTCTTGCTAAACTCGTAGCAGTTTGCGGTCCCTATCACAGAATGACAGCCGGAGCTTACAGTTTACTTGCTGTGGTTCTATATCACACTGGTGACTTTAACCAGGCTACAATATATCAGCAAAAGGCTTTAGACATCAATGAGAGGGAACTTGGACTTGATCATCCAGATACAATGAAGAGTTATGGTGATCTTGCTGTCTTCTATTATAGGCTTCAGCATACAGAGCTGGCTCTCAAGTATGTTAAGCGTGCGTTGTATCTCTTACATCTCACATGCGGTCCATCTCATCCAAATACTGCTGCTACATACATCAATGTAGCCATGATGGAGGAAGGTCTAGGAAATGTGCATGTTGCCTTGAGGTATCTTCACAAAGCTCTCAAGTGTAATCAAAGGTTGCTTGGTCCGGACCATATCCAGACTGCTGCAAGCTACCATGCCATAGCAATTGCGCTCTCCTTGATGGAGGCATACCATTTAAGTGTTCAGCATGAGCAAACAACCTTAAGAATCCTTCGAGCAAAGCTGGGGCCAGATGATTTACGTACTCAGGATGCTGCTGCTTGGCTAGAATACTTTGAGTCCAAGGCTTTTGAACAACAAGAAGCTGCGCGAAATGGTACTCCTAAGCCAGACGCGTCTATAGCCAGCAAAGGCCACCTAAGTGTTTCCGATCTACTCGACTATATCAACCCAAGTCATAACGCAAAAGGCAAAGAGAGCGTGGCAGCAAAGAGGAAGAACTATATTCTGAAGCTAAAGGAAAAATCCAAGCAAAGCAATGTTTCTGAACACTTGGTGGAAATTCCGAGAGAAAAGCAAAAGGAGATGTCTGAAGAGGATACGGAAGAAACTGGATCAGAAGAAGGTAAATCAAGCGAAGAGAATCACGAGACAATTCTTGCACCAGTTGAAGAACCACCTTCTCCTCCAGTAATTGAGGACGCTACTATGGATAACAGTAATCCAATTACATCTAGCGACGTTTCAACCGAGCCACAACACCCTGATGGTAGTGAAGATGGATGGCAACCGGTGCAAAGACCGAGATCTGCTGGATCATATGGTCGCAGGATGAAGCAACGGCGAGCATCCATCGGGAAGGTATATACATATCAGAAGAAGAATGTTGAAGCTGATATCGATAACCCTCTTTTCCAGAATGCTACTCAGCAGAACGACAAATACTACATTCTCAAGAAGCGAACAGCATCATATTCAAGCTATGCAGATCATCATTCTCCTGGTTTAACAACTCAAGGCACCAAATTTGGCAGGAAGATAGTTAAAACCTTGGCGTATCGGGTTAAATCGACGCAGCCGTCTTCTGGTAACGCTAAGACTGCTGGTGAAACTTCAGAAGAAGATGGGTTGAAGACAGATGCTTCTTCTGTTGAGCCACCTACTCTGTCTAGTACTGTGCAAAGTGAAGCCTACCACACGAAAAACTCTGTTGTAAGTCTTGGAAAATCTCCATCCTACAAGGAAGTAGCATTGGCACCACCTGGTTCAATTGCTAAGTATCAAGTCTGGGTTCCACAAGCGGAAGTTTCAGATAAGCAAGAGGATGATGAGATGGAGAAAAAAACTGAACAGGGTACATCAATGGAGCTTACAAGGGATGAGCAAATGATAACAGGGTTAGAGGAAGAGGTAAAAAAGGAAATTTCTGCAGACCCAGAATCTAACATAACCCAAGGCGAAGAAGAGATCAAAGTAGAGTTACAACCATCTGAAGGAGTACTCGGAGGAAGTCATATAAATGAAAACGACGAATCTGGGGGTGGAATTCAGGTTGAAGAACAAGTCGAAGTTGAATTGATAAACGATGGTGTAACAGATATGATTCATTCGACCAGAGAGCAACAAGTGATAGATCAATTAGCTGCTGATTCCGAAGATCTGAAGGCAAAACTGTCAATTTCTACTACGGACTCAGGCGATGCCTCACGAGGATTGTTGCCTAACAAGAAGCTATCTGCGTCAGCTGCTCCATTCAACCCATCATCACCTCCAAGTATTATACGTCCTACTCCAATAGGCATGAACATTGGACCGTCGTGGCCAGTGAACATGACTCTTCATCACGGACCTCCTCCTCCTTACCCTTCACCTCCGACAACTCCAAACTTGATGCAGCCAATGTCCTTTGTTTACCCTCCTCCTTACAGTCAATCAGTCCCCACAAGTACTTACCCTGTAACAAGCGGTCCTTTTCATCCCAATCAGTTCCCATGGCAGCTCAATGTGTCGGATTTTGTACCAAGAACGGTTTGGCCTGGATGCCATCCCGTTGAGTTTCCCCCACCGCACATGATCACCGAGCCAATAGCTGCAACTGTGTTAGAGCCAACTGTGATTCTGCCAACGGATATTGACACTTCAGGTGTAGAAGAAACCAAAGAAGGCACGCAAGATGTGGCAGTCGCCGATGAAGTTATGGATTCTGTTAACCATGTGAACAACGCAGTTGCACGCAGTGAAACGGAGAATGGAAACCGGAAATCTGAGGAAGGTGAGAAAACTTTCAGCATTTTGTTAAGAGGGAGGAGAAACAGGAAACAAACACTGAGAATGCCAATCAGTTTGCTTAACCGGCCTTATGATTCTCAACCGTTCAAGCTTGGCTATAGCAGAGTTATCAGAGACAGCGAGGCTCCAAAGTCTGTAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLU_N TPR_12 eIF3_p135

Protein Analysis

1797

Amino Acids

198.77

Weight (kDa)

5.92

Isoelectric Point (pI)

48.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLU_N PF15044 45 - 115 1.3e-08 Mitochondrial function, CLU-N-term
eIF3_p135 PF12807 698 - 843 4.4e-23 Translation initiation factor eIF3 subunit 135
TPR_12 PF13424 883 - 945 2.6e-07 Tetratricopeptide repeat
TPR_NPHP3 PF24885 884 - 984 9.5e-08 Nephrocystin-3 TPR domain
TPR_10 PF13374 913 - 954 2e-09 Tetratricopeptide repeat
TPR_12 PF13424 913 - 983 1.3e-12 Tetratricopeptide repeat
TPR_10 PF13374 997 - 1037 1.6e-07 Tetratricopeptide repeat
TPR_12 PF13424 997 - 1071 4.5e-12 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 191
AasI GACNNNNNNGTC 1 cut(s) 4039
Acc16I TGCGCA 1 cut(s) 402
Acc36I ACCTGC 2 cut(s) 191, 394
AccB1I GGYRCC 2 cut(s) 3980, 4216
AccB7I CCANNNNNTGG 1 cut(s) 2105
AccI GTMKAC 1 cut(s) 2022
AccII CGCG 5 cut(s) 229, 587, 1085, 3331, 3356
AccIII TCCGGA 3 cut(s) 97, 2550, 3124
AclWI GGATC 5 cut(s) 149, 232, 2463, 3583, 3784
AcoI YGGCCR 2 cut(s) 2107, 4781
AcyI GRCGYC 1 cut(s) 1826
AdeI CACNNNGTG 2 cut(s) 3517, 5198
AfiI CCNNNNNNNGG 9 cut(s) 521, 910, 1300, 1463, 2105, 2254, 2398, 4046, 4454
AflII CTTAAG 4 cut(s) 1364, 1775, 2237, 3223
AflIII ACRYGT 2 cut(s) 2194, 3354
AgeI ACCGGT 2 cut(s) 1724, 3751
AjiI CACGTC 1 cut(s) 190
AjnI CCWGG 5 cut(s) 2250, 2817, 3961, 4222, 4996
AleI CACNNNNGTG 2 cut(s) 2805, 3381
Alw21I GWGCWC 2 cut(s) 1932, 2094
Alw26I GTCTC 9 cut(s) 462, 491, 1024, 1035, 1163, 1173, 1851, 3605, 5358
AlwI GGATC 5 cut(s) 149, 232, 2463, 3583, 3784
AlwNI CAGNNNCTG 2 cut(s) 1874, 1988
Aor13HI TCCGGA 3 cut(s) 97, 2550, 3124
AoxI GGCC 7 cut(s) 255, 2107, 3248, 3373, 4781, 4994, 5315
AsiGI ACCGGT 2 cut(s) 1724, 3751
Asp700I GAANNNNTTC 2 cut(s) 424, 5243
AspLEI GCGC 6 cut(s) 319, 403, 810, 877, 3172, 3331
AsuC2I CCSGG 1 cut(s) 68
AvaII GGWCC 9 cut(s) 365, 978, 2744, 2996, 3122, 3127, 4772, 4808, 4928
BaeI ACNNNNGTAYC 2 cut(s) 465, 498
BalI TGGCCA 1 cut(s) 4783
BanI GGYRCC 2 cut(s) 3980, 4216
BanII GRGCYC 2 cut(s) 2094, 2236
BauI CACGAG 2 cut(s) 3608, 4668
BbsI GAAGAC 5 cut(s) 1152, 2135, 2908, 4035, 4100
Bbv12I GWGCWC 2 cut(s) 1932, 2094
BbvCI CCTCAGC 1 cut(s) 1542
BceAI ACGGC 4 cut(s) 344, 439, 3818, 4024
BcgI CGANNNNNNTGC 2 cut(s) 2469, 2503
BciT130I CCWGG 5 cut(s) 2252, 2819, 3963, 4224, 4998
BciVI GTATCC 6 cut(s) 433, 466, 1198, 1225, 1668, 3553
BclI TGATCA 2 cut(s) 2875, 5034
BcnI CCSGG 1 cut(s) 68
BcoDI GTCTC 9 cut(s) 462, 491, 1024, 1035, 1163, 1173, 1851, 3605, 5358
BfaI CTAG 5 cut(s) 501, 3056, 3287, 3696, 4131
BfmI CTRYAG 4 cut(s) 3360, 4389, 5347, 5385
BfrI CTTAAG 4 cut(s) 1364, 1775, 2237, 3223
BfuAI ACCTGC 2 cut(s) 191, 394
BfuI GTATCC 6 cut(s) 433, 466, 1198, 1225, 1668, 3553
BglI GCCNNNNNGGC 1 cut(s) 1103
BglII AGATCT 2 cut(s) 3767, 4618
BlpI GCTNAGC 2 cut(s) 1125, 1611
BmcAI AGTACT 5 cut(s) 1134, 1370, 4135, 4461, 4909
Bme1390I CCNGG 6 cut(s) 68, 2252, 2819, 3963, 4224, 4998
Bme18I GGWCC 9 cut(s) 365, 978, 2744, 2996, 3122, 3127, 4772, 4808, 4928
BmgBI CACGTC 1 cut(s) 190
BmiI GGNNCC 9 cut(s) 6, 972, 1292, 2746, 3249, 3982, 4218, 4254, 5376
BmrFI CCNGG 6 cut(s) 68, 2252, 2819, 3963, 4224, 4998
BmrI ACTGGG 2 cut(s) 2093, 2573
BmuI ACTGGG 2 cut(s) 2093, 2573
BpiI GAAGAC 5 cut(s) 1152, 2135, 2908, 4035, 4100
BplI GAGNNNNNCTC 2 cut(s) 527, 559
BpmI CTGGAG 3 cut(s) 2234, 2672, 3633
Bpu10I CCTNAGC 4 cut(s) 516, 1521, 1542, 3345
Bpu1102I GCTNAGC 2 cut(s) 1125, 1611
BpuEI CTTGAG 9 cut(s) 1283, 1637, 1833, 1902, 2936, 3083, 3097, 3899, 3960
BpuMI CCSGG 1 cut(s) 68
Bsa29I ATCGAT 2 cut(s) 1242, 3861
BsaAI YACGTR 1 cut(s) 3263
BsaBI GATNNNNATC 1 cut(s) 2430
BsaHI GRCGYC 1 cut(s) 1826
BsaWI WCCGGW 6 cut(s) 97, 1724, 2550, 3124, 3751, 5217
BsaXI ACNNNNNCTCC 2 cut(s) 433, 463
Bsc4I CCNNNNNNNGG 9 cut(s) 521, 910, 1300, 1463, 2105, 2254, 2398, 4046, 4454
Bse118I RCCGGY 3 cut(s) 1724, 3751, 5313
Bse3DI GCAATG 3 cut(s) 1380, 1605, 3505
Bse8I GATNNNNATC 1 cut(s) 2430
BseAI TCCGGA 3 cut(s) 97, 2550, 3124
BseBI CCWGG 5 cut(s) 2252, 2819, 3963, 4224, 4998
BseCI ATCGAT 2 cut(s) 1242, 3861
BseJI GATNNNNATC 1 cut(s) 2430
BseLI CCNNNNNNNGG 9 cut(s) 521, 910, 1300, 1463, 2105, 2254, 2398, 4046, 4454
BseMI GCAATG 3 cut(s) 1380, 1605, 3505
BseMII CTCAG 9 cut(s) 1116, 1512, 1556, 1896, 3281, 3902, 4668, 5217, 5279
BseYI CCCAGC 1 cut(s) 3244
BsgI GTGCAG 1 cut(s) 2526
Bsh1236I CGCG 5 cut(s) 229, 587, 1085, 3331, 3356
BshFI GGCC 7 cut(s) 257, 2109, 3250, 3375, 4783, 4996, 5317
BshNI GGYRCC 2 cut(s) 3980, 4216
BshTI ACCGGT 2 cut(s) 1724, 3751
BshVI ATCGAT 2 cut(s) 1242, 3861
BsiHKAI GWGCWC 2 cut(s) 1932, 2094
BslFI GGGAC 6 cut(s) 1317, 1765, 2534, 2561, 2730, 4883
BslI CCNNNNNNNGG 9 cut(s) 521, 910, 1300, 1463, 2105, 2254, 2398, 4046, 4454
BsmAI GTCTC 9 cut(s) 462, 491, 1024, 1035, 1163, 1173, 1851, 3605, 5358
BsmBI CGTCTC 2 cut(s) 462, 1851
BsmFI GGGAC 6 cut(s) 1317, 1765, 2534, 2561, 2730, 4883
BsmI GAATGC 3 cut(s) 1918, 3886, 5298
BsnI GGCC 7 cut(s) 257, 2109, 3250, 3375, 4783, 4996, 5317
Bsp1286I GDGCHC 3 cut(s) 1932, 2094, 2236
Bsp13I TCCGGA 3 cut(s) 97, 2550, 3124
Bsp1407I TGTACA 2 cut(s) 2197, 2374
Bsp1720I GCTNAGC 2 cut(s) 1125, 1611
Bsp19I CCATGG 2 cut(s) 974, 4952
Bsp68I TCGCGA 2 cut(s) 587, 1085
BspANI GGCC 7 cut(s) 257, 2109, 3250, 3375, 4783, 4996, 5317
BspCNI CTCAG 9 cut(s) 1117, 1513, 1555, 1897, 3280, 3901, 4667, 5218, 5280
BspDI ATCGAT 2 cut(s) 1242, 3861
BspEI TCCGGA 3 cut(s) 97, 2550, 3124
BspFNI CGCG 5 cut(s) 229, 587, 1085, 3331, 3356
BspHI TCATGA 3 cut(s) 1333, 1647, 2215
BspLI GGNNCC 9 cut(s) 6, 972, 1292, 2746, 3249, 3982, 4218, 4254, 5376
BspMAI CTGCAG 1 cut(s) 4393
BspMI ACCTGC 2 cut(s) 191, 394
BspPI GGATC 5 cut(s) 149, 232, 2463, 3583, 3784
BspT107I GGYRCC 2 cut(s) 3980, 4216
BspTI CTTAAG 4 cut(s) 1364, 1775, 2237, 3223
BsrDI GCAATG 3 cut(s) 1380, 1605, 3505
BsrFI RCCGGY 3 cut(s) 1724, 3751, 5313
BsrGI TGTACA 2 cut(s) 2197, 2374
BssAI RCCGGY 3 cut(s) 1724, 3751, 5313
BssNI GRCGYC 1 cut(s) 1826
BssSI CACGAG 2 cut(s) 3608, 4668
BssT1I CCWWGG 8 cut(s) 615, 974, 2366, 2516, 3303, 4011, 4414, 4952
Bst2BI CACGAG 2 cut(s) 3608, 4668
Bst2UI CCWGG 5 cut(s) 2252, 2819, 3963, 4224, 4998
Bst6I CTCTTC 9 cut(s) 48, 282, 573, 2888, 3549, 3594, 4362, 4419, 4803
BstACI GRCGYC 1 cut(s) 1826
BstAFI CTTAAG 4 cut(s) 1364, 1775, 2237, 3223
BstAPI GCANNNNNTGC 1 cut(s) 3754
BstAUI TGTACA 2 cut(s) 2197, 2374
BstBAI YACGTR 1 cut(s) 3263
BstC8I GCNNGC 9 cut(s) 585, 2616, 2946, 2967, 3148, 3367, 3807, 5129, 5194
BstDSI CCRYGG 3 cut(s) 19, 974, 4952
BstENI CCTNNNNNAGG 1 cut(s) 1298
BstFNI CGCG 5 cut(s) 229, 587, 1085, 3331, 3356
BstHHI GCGC 6 cut(s) 319, 403, 810, 877, 3172, 3331
BstMAI GTCTC 9 cut(s) 462, 491, 1024, 1035, 1163, 1173, 1851, 3605, 5358
BstNI CCWGG 5 cut(s) 2252, 2819, 3963, 4224, 4998
BstNSI RCATGY 4 cut(s) 2198, 2625, 2994, 3071
BstSCI CCNGG 6 cut(s) 66, 2250, 2817, 3961, 4222, 4996
BstSFI CTRYAG 4 cut(s) 3360, 4389, 5347, 5385
BstSNI TACGTA 1 cut(s) 3263
BstUI CGCG 5 cut(s) 229, 587, 1085, 3331, 3356
BstV2I GAAGAC 5 cut(s) 1152, 2135, 2908, 4035, 4100
BstX2I RGATCY 3 cut(s) 2455, 3767, 4618
BstXI CCANNNNNNTGG 2 cut(s) 1264, 2498
BstYI RGATCY 3 cut(s) 2455, 3767, 4618
Bsu15I ATCGAT 2 cut(s) 1242, 3861
BsuI GTATCC 6 cut(s) 433, 466, 1198, 1225, 1668, 3553
BsuRI GGCC 7 cut(s) 257, 2109, 3250, 3375, 4783, 4996, 5317
BsuTUI ATCGAT 2 cut(s) 1242, 3861
BtgI CCRYGG 3 cut(s) 19, 974, 4952
BtgZI GCGATG 1 cut(s) 4674
BtrI CACGTC 1 cut(s) 190
BtsI GCAGTG 2 cut(s) 318, 5203
BtuMI TCGCGA 2 cut(s) 587, 1085
BveI ACCTGC 2 cut(s) 191, 394
Cac8I GCNNGC 9 cut(s) 585, 2616, 2946, 2967, 3148, 3367, 3807, 5129, 5194
CaiI CAGNNNCTG 2 cut(s) 1874, 1988
CciI TCATGA 3 cut(s) 1333, 1647, 2215
CfoI GCGC 6 cut(s) 319, 403, 810, 877, 3172, 3331
Cfr10I RCCGGY 3 cut(s) 1724, 3751, 5313
ClaI ATCGAT 2 cut(s) 1242, 3861
CpoI CGGWCCG 1 cut(s) 365
CseI GACGC 7 cut(s) 453, 1834, 3345, 3362, 3671, 4042, 4689
CsiI ACCWGGT 1 cut(s) 4222
CspAI ACCGGT 2 cut(s) 1724, 3751
CspI CGGWCCG 1 cut(s) 365
DraI TTTAAA 1 cut(s) 2602
DraIII CACNNNGTG 2 cut(s) 3517, 5198
DrdI GACNNNNNNGTC 1 cut(s) 4039
DseDI GACNNNNNNGTC 1 cut(s) 4039
EaeI YGGCCR 2 cut(s) 2107, 4781
Eam1104I CTCTTC 9 cut(s) 48, 282, 573, 2888, 3549, 3594, 4362, 4419, 4803
EarI CTCTTC 9 cut(s) 48, 282, 573, 2888, 3549, 3594, 4362, 4419, 4803
EciI GGCGGA 2 cut(s) 441, 885
Ecl136II GAGCTC 1 cut(s) 2092
Eco105I TACGTA 1 cut(s) 3263
Eco130I CCWWGG 8 cut(s) 615, 974, 2366, 2516, 3303, 4011, 4414, 4952
Eco24I GRGCYC 2 cut(s) 2094, 2236
Eco32I GATATC 1 cut(s) 3859
Eco47I GGWCC 9 cut(s) 365, 978, 2744, 2996, 3122, 3127, 4772, 4808, 4928
Eco53kI GAGCTC 1 cut(s) 2092
EcoICRI GAGCTC 1 cut(s) 2092
EcoNI CCTNNNNNAGG 1 cut(s) 1298
EcoRI GAATTC 4 cut(s) 424, 986, 1248, 4506
EcoRII CCWGG 5 cut(s) 2250, 2817, 3961, 4222, 4996
EcoRV GATATC 1 cut(s) 3859
EcoT14I CCWWGG 8 cut(s) 615, 974, 2366, 2516, 3303, 4011, 4414, 4952
EcoT38I GRGCYC 2 cut(s) 2094, 2236
ErhI CCWWGG 8 cut(s) 615, 974, 2366, 2516, 3303, 4011, 4414, 4952
Esp3I CGTCTC 2 cut(s) 462, 1851
FaqI GGGAC 6 cut(s) 1317, 1765, 2534, 2561, 2730, 4883
FauI CCCGC 2 cut(s) 588, 870
FauNDI CATATG 3 cut(s) 832, 2704, 3781
FbaI TGATCA 2 cut(s) 2875, 5034
FblI GTMKAC 1 cut(s) 2022
FriOI GRGCYC 2 cut(s) 2094, 2236
FspBI CTAG 5 cut(s) 501, 3056, 3287, 3696, 4131
FspI TGCGCA 1 cut(s) 402
GlaI GCGC 6 cut(s) 318, 402, 809, 876, 3171, 3330
GsaI CCCAGC 1 cut(s) 3248
GsuI CTGGAG 3 cut(s) 2234, 2672, 3633
HaeIII GGCC 7 cut(s) 257, 2109, 3250, 3375, 4783, 4996, 5317
HgaI GACGC 7 cut(s) 453, 1834, 3345, 3362, 3671, 4042, 4689
HhaI GCGC 6 cut(s) 319, 403, 810, 877, 3172, 3331
Hin1I GRCGYC 1 cut(s) 1826
Hin6I GCGC 6 cut(s) 317, 401, 808, 875, 3170, 3329
HinP1I GCGC 6 cut(s) 317, 401, 808, 875, 3170, 3329
HincII GTYRAC 5 cut(s) 172, 282, 1441, 2023, 5170
HindII GTYRAC 5 cut(s) 172, 282, 1441, 2023, 5170
HindIII AAGCTT 6 cut(s) 518, 647, 1613, 2174, 2684, 5339
HpaI GTTAAC 3 cut(s) 172, 282, 5170
Hpy99I CGWCG 8 cut(s) 347, 373, 448, 469, 3704, 4036, 4493, 4780
HpyCH4IV ACGT 8 cut(s) 189, 278, 321, 443, 1338, 3262, 3702, 4744
HpySE526I ACGT 8 cut(s) 189, 278, 321, 443, 1338, 3262, 3702, 4744
Hsp92I GRCGYC 1 cut(s) 1826
HspAI GCGC 6 cut(s) 317, 401, 808, 875, 3170, 3329
Kpn2I TCCGGA 3 cut(s) 97, 2550, 3124
Ksp22I TGATCA 2 cut(s) 2875, 5034
KspAI GTTAAC 3 cut(s) 172, 282, 5170
LmnI GCTCC 9 cut(s) 10, 805, 1657, 1664, 2089, 2768, 4327, 4714, 5380
MabI ACCWGGT 1 cut(s) 4222
MaeI CTAG 5 cut(s) 501, 3056, 3287, 3696, 4131
MaeII ACGT 8 cut(s) 189, 278, 321, 443, 1338, 3262, 3702, 4744
MfeI CAATTG 2 cut(s) 3165, 4230
MflI RGATCY 3 cut(s) 2455, 3767, 4618
MhlI GDGCHC 3 cut(s) 1932, 2094, 2236
MlsI TGGCCA 1 cut(s) 4783
MluI ACGCGT 1 cut(s) 3354
MluNI TGGCCA 1 cut(s) 4783
MlyI GAGTC 8 cut(s) 380, 1142, 1988, 2107, 2663, 3308, 4646, 4789
MmeI TCCRAC 6 cut(s) 417, 1005, 1652, 2379, 4859, 4950
Mox20I TGGCCA 1 cut(s) 4783
MroI TCCGGA 3 cut(s) 97, 2550, 3124
MroXI GAANNNNTTC 2 cut(s) 424, 5243
MscI TGGCCA 1 cut(s) 4783
MslI CAYNNNNRTG 7 cut(s) 641, 1554, 2805, 3198, 3381, 3726, 4479
Msp20I TGGCCA 1 cut(s) 4783
MspA1I CMGCKG 2 cut(s) 1313, 4706
MspCI CTTAAG 4 cut(s) 1364, 1775, 2237, 3223
MspR9I CCNGG 6 cut(s) 68, 2252, 2819, 3963, 4224, 4998
MunI CAATTG 2 cut(s) 3165, 4230
Mva1269I GAATGC 3 cut(s) 1918, 3886, 5298
MvaI CCWGG 5 cut(s) 2252, 2819, 3963, 4224, 4998
MvnI CGCG 5 cut(s) 229, 587, 1085, 3331, 3356
NciI CCSGG 1 cut(s) 68
NcoI CCATGG 2 cut(s) 974, 4952
NdeI CATATG 3 cut(s) 832, 2704, 3781
NlaIV GGNNCC 9 cut(s) 6, 972, 1292, 2746, 3249, 3982, 4218, 4254, 5376
NmuCI GTSAC 5 cut(s) 190, 725, 879, 2190, 2807
NruI TCGCGA 2 cut(s) 587, 1085
NsbI TGCGCA 1 cut(s) 402
NspI RCATGY 4 cut(s) 2198, 2625, 2994, 3071
OliI CACNNNNGTG 2 cut(s) 2805, 3381
PagI TCATGA 3 cut(s) 1333, 1647, 2215
PaqCI CACCTGC 1 cut(s) 191
PciI ACATGT 1 cut(s) 2194
PcsI WCGNNNNNNNCGW 3 cut(s) 452, 3708, 4037
PctI GAATGC 3 cut(s) 1918, 3886, 5298
PdmI GAANNNNTTC 2 cut(s) 424, 5243
PflFI GACNNNGTC 1 cut(s) 341
PflMI CCANNNNNTGG 1 cut(s) 2105
PinAI ACCGGT 2 cut(s) 1724, 3751
PleI GAGTC 8 cut(s) 380, 1142, 1987, 2107, 2662, 3307, 4646, 4789
PpsI GAGTC 8 cut(s) 380, 1142, 1987, 2107, 2662, 3307, 4646, 4789
Ppu21I YACGTR 1 cut(s) 3263
PscI ACATGT 1 cut(s) 2194
Psp124BI GAGCTC 1 cut(s) 2094
Psp6I CCWGG 5 cut(s) 2250, 2817, 3961, 4222, 4996
PspFI CCCAGC 1 cut(s) 3244
PspGI CCWGG 5 cut(s) 2250, 2817, 3961, 4222, 4996
PspN4I GGNNCC 9 cut(s) 6, 972, 1292, 2746, 3249, 3982, 4218, 4254, 5376
PsrI GAACNNNNNNTAC 2 cut(s) 3887, 3919
PstI CTGCAG 1 cut(s) 4393
PstNI CAGNNNCTG 2 cut(s) 1874, 1988
PsuI RGATCY 3 cut(s) 2455, 3767, 4618
PsyI GACNNNGTC 1 cut(s) 341
PvuII CAGCTG 2 cut(s) 1313, 4706
RruI TCGCGA 2 cut(s) 587, 1085
RseI CAYNNNNRTG 7 cut(s) 641, 1554, 2805, 3198, 3381, 3726, 4479
Rsr2I CGGWCCG 1 cut(s) 365
RsrII CGGWCCG 1 cut(s) 365
SacI GAGCTC 1 cut(s) 2094
SalI GTCGAC 1 cut(s) 2021
ScaI AGTACT 5 cut(s) 1134, 1370, 4135, 4461, 4909
SchI GAGTC 8 cut(s) 380, 1142, 1988, 2107, 2663, 3308, 4646, 4789
ScrFI CCNGG 6 cut(s) 68, 2252, 2819, 3963, 4224, 4998
SduI GDGCHC 3 cut(s) 1932, 2094, 2236
SexAI ACCWGGT 1 cut(s) 4222
SfcI CTRYAG 4 cut(s) 3360, 4389, 5347, 5385
SinI GGWCC 9 cut(s) 365, 978, 2744, 2996, 3122, 3127, 4772, 4808, 4928
SmiMI CAYNNNNRTG 7 cut(s) 641, 1554, 2805, 3198, 3381, 3726, 4479
SnaBI TACGTA 1 cut(s) 3263
SspMI CTAG 5 cut(s) 501, 3056, 3287, 3696, 4131
SstI GAGCTC 1 cut(s) 2094
StyD4I CCNGG 6 cut(s) 66, 2250, 2817, 3961, 4222, 4996
StyI CCWWGG 8 cut(s) 615, 974, 2366, 2516, 3303, 4011, 4414, 4952
TaiI ACGT 8 cut(s) 192, 281, 324, 446, 1341, 3265, 3705, 4747
TaqII GACCGA 2 cut(s) 353, 3778
TatI WGTACW 7 cut(s) 1132, 1368, 2197, 2374, 4133, 4459, 4907
TauI GCSGC 3 cut(s) 160, 875, 1831
TseFI GTSAC 5 cut(s) 190, 725, 879, 2190, 2807
Tsp45I GTSAC 5 cut(s) 190, 725, 879, 2190, 2807
Tth111I GACNNNGTC 1 cut(s) 341
Van91I CCANNNNNTGG 1 cut(s) 2105
Vha464I CTTAAG 4 cut(s) 1364, 1775, 2237, 3223
VpaK11BI GGWCC 9 cut(s) 365, 978, 2744, 2996, 3122, 3127, 4772, 4808, 4928
XagI CCTNNNNNAGG 1 cut(s) 1298
XceI RCATGY 4 cut(s) 2198, 2625, 2994, 3071
XcmI CCANNNNNNNNNTGG 2 cut(s) 2364, 4989
XmiI GTMKAC 1 cut(s) 2022
XmnI GAANNNNTTC 2 cut(s) 424, 5243
XspI CTAG 5 cut(s) 501, 3056, 3287, 3696, 4131
ZrmI AGTACT 5 cut(s) 1134, 1370, 4135, 4461, 4909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.