Clustered mitochondria protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01320 AT1G01320 AT1G01320 |
| fragaria_vesca | FvH4_7g16420 FvH4_7g16420 |
| malus_domestica | MD01G1080500.v1.1 MD07G1149400.v1.1 |
| prunus_persica | Prupe.2G188000_v2.0.a1 Prupe.2G188000_v2.0.a1 |
| pyrus_communis | pycom01g10860 pycom03g14110 pycom07g14800 pycom14g11950 |
| rosa_chinensis | RchiOBHm_Chr1g0359431 RchiOBHm_Chr1g0359451 |
| rosa_laevigata | RLG00000027870 |
| rosa_multiflora | Rmu_ssc0000358.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00297010 |
| rosa_rugosa | Rorug01G0271200 Rorug01G0271300 |
| rosa_samantha | Rh1AG284600 Rh1BG250600 Rh1CG268700 Rh1DG279700 |
| rosa_wichuraiana | Rw1G025280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1163 |
| AatII | GACGTC | 1 cut(s) | 159 |
| Acc16I | TGCGCA | 1 cut(s) | 354 |
| Acc36I | ACCTGC | 2 cut(s) | 3547, 4589 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1991, 4655 |
| AccI | GTMKAC | 2 cut(s) | 3866, 5275 |
| AccII | CGCG | 3 cut(s) | 149, 216, 237 |
| AclI | AACGTT | 1 cut(s) | 5368 |
| AclWI | GGATC | 7 cut(s) | 1289, 2316, 2769, 4302, 4315, 4403, 4416 |
| AcoI | YGGCCR | 1 cut(s) | 387 |
| AcsI | RAATTY | 7 cut(s) | 929, 1224, 3084, 3514, 3970, 4043, 4970 |
| AcuI | CTGAAG | 7 cut(s) | 840, 1485, 1953, 2120, 3684, 3903, 5191 |
| AcvI | CACGTG | 2 cut(s) | 822, 4556 |
| AcyI | GRCGYC | 4 cut(s) | 5, 156, 1649, 3619 |
| AdeI | CACNNNGTG | 1 cut(s) | 2374 |
| AfaI | GTAC | 9 cut(s) | 831, 1925, 3149, 3423, 3805, 4033, 4660, 4760, 4885 |
| AflII | CTTAAG | 2 cut(s) | 1664, 3235 |
| AflIII | ACRYGT | 4 cut(s) | 235, 819, 2846, 5306 |
| AgeI | ACCGGT | 1 cut(s) | 5348 |
| AhlI | ACTAGT | 1 cut(s) | 4811 |
| AjiI | CACGTC | 1 cut(s) | 445 |
| AjnI | CCWGG | 7 cut(s) | 944, 2910, 3453, 4027, 4648, 4654, 4894 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 4166, 4198 |
| AleI | CACNNNNGTG | 1 cut(s) | 3237 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4071, 4103 |
| Alw21I | GWGCWC | 3 cut(s) | 243, 759, 4691 |
| AlwI | GGATC | 7 cut(s) | 1289, 2316, 2769, 4302, 4315, 4403, 4416 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1874, 4034, 4655, 5381 |
| ApoI | RAATTY | 7 cut(s) | 929, 1224, 3084, 3514, 3970, 4043, 4970 |
| AseI | ATTAAT | 1 cut(s) | 1071 |
| AsiGI | ACCGGT | 1 cut(s) | 5348 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1022, 4795, 5204 |
| AspLEI | GCGC | 8 cut(s) | 7, 216, 218, 346, 355, 2040, 2575, 4096 |
| AsuC2I | CCSGG | 1 cut(s) | 348 |
| AsuII | TTCGAA | 1 cut(s) | 550 |
| AvaII | GGWCC | 6 cut(s) | 295, 1998, 2600, 2852, 4195, 5099 |
| BamHI | GGATCC | 2 cut(s) | 4307, 4408 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 2 cut(s) | 759, 3891 |
| BbrPI | CACGTG | 2 cut(s) | 822, 4556 |
| BbsI | GAAGAC | 3 cut(s) | 2021, 3360, 4263 |
| Bbv12I | GWGCWC | 3 cut(s) | 243, 759, 4691 |
| BbvCI | CCTCAGC | 3 cut(s) | 993, 3483, 4519 |
| BceAI | ACGGC | 7 cut(s) | 3, 237, 402, 581, 734, 2138, 3476 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 233, 267, 530, 564, 1427, 1461, 4572, 4606 |
| BciT130I | CCWGG | 7 cut(s) | 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| BclI | TGATCA | 2 cut(s) | 592, 1429 |
| BcnI | CCSGG | 1 cut(s) | 348 |
| BcuI | ACTAGT | 1 cut(s) | 4811 |
| BfmI | CTRYAG | 4 cut(s) | 1287, 1776, 2643, 3975 |
| BfoI | RGCGCY | 2 cut(s) | 8, 2576 |
| BfrI | CTTAAG | 2 cut(s) | 1664, 3235 |
| BfuAI | ACCTGC | 2 cut(s) | 3547, 4589 |
| BlpI | GCTNAGC | 2 cut(s) | 3349, 4938 |
| BmcAI | AGTACT | 2 cut(s) | 1925, 3149 |
| Bme1390I | CCNGG | 8 cut(s) | 348, 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| Bme18I | GGWCC | 6 cut(s) | 295, 1998, 2600, 2852, 4195, 5099 |
| BmgBI | CACGTC | 1 cut(s) | 445 |
| BmiI | GGNNCC | 8 cut(s) | 6, 430, 1969, 2391, 4023, 4309, 4410, 4965 |
| BmrFI | CCNGG | 8 cut(s) | 348, 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| BmrI | ACTGGG | 4 cut(s) | 2450, 3956, 4494, 4864 |
| BmuI | ACTGGG | 4 cut(s) | 2450, 3956, 4494, 4864 |
| BoxI | GACNNNNGTC | 1 cut(s) | 188 |
| BpiI | GAAGAC | 3 cut(s) | 2021, 3360, 4263 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3449, 3481 |
| BpmI | CTGGAG | 5 cut(s) | 1257, 2297, 2682, 4236, 4977 |
| Bpu10I | CCTNAGC | 4 cut(s) | 306, 993, 3483, 4519 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3349, 4938 |
| Bpu14I | TTCGAA | 1 cut(s) | 550 |
| BpuEI | CTTGAG | 6 cut(s) | 152, 399, 470, 1811, 2792, 3164 |
| BpuMI | CCSGG | 1 cut(s) | 348 |
| Bsa29I | ATCGAT | 3 cut(s) | 136, 1552, 3555 |
| BsaAI | YACGTR | 2 cut(s) | 822, 4556 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1558 |
| BsaHI | GRCGYC | 4 cut(s) | 5, 156, 1649, 3619 |
| BsaI | GGTCTC | 1 cut(s) | 455 |
| BsaWI | WCCGGW | 4 cut(s) | 425, 1099, 3472, 5348 |
| Bse118I | RCCGGY | 3 cut(s) | 286, 1516, 5348 |
| Bse3DI | GCAATG | 6 cut(s) | 631, 1356, 4578, 4745, 5070, 5077 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1558 |
| BseBI | CCWGG | 7 cut(s) | 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| BseCI | ATCGAT | 3 cut(s) | 136, 1552, 3555 |
| BseJI | GATNNNNATC | 1 cut(s) | 1558 |
| BseMI | GCAATG | 6 cut(s) | 631, 1356, 4578, 4745, 5070, 5077 |
| BsePI | GCGCGC | 1 cut(s) | 214 |
| BseRI | GAGGAG | 4 cut(s) | 1010, 2353, 4681, 4707 |
| BseX3I | CGGCCG | 1 cut(s) | 387 |
| BseYI | CCCAGC | 1 cut(s) | 2209 |
| BsgI | GTGCAG | 3 cut(s) | 1100, 2105, 4617 |
| Bsh1236I | CGCG | 3 cut(s) | 149, 216, 237 |
| Bsh1285I | CGRYCG | 2 cut(s) | 390, 5279 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BshTI | ACCGGT | 1 cut(s) | 5348 |
| BshVI | ATCGAT | 3 cut(s) | 136, 1552, 3555 |
| BsiEI | CGRYCG | 2 cut(s) | 390, 5279 |
| BsiHKAI | GWGCWC | 3 cut(s) | 243, 759, 4691 |
| BsiSI | CCGG | 8 cut(s) | 287, 347, 426, 1100, 1517, 2622, 3473, 5349 |
| BslFI | GGGAC | 8 cut(s) | 1169, 1653, 1660, 2074, 2438, 3208, 3252, 4592 |
| BsmBI | CGTCTC | 3 cut(s) | 163, 435, 4397 |
| BsmFI | GGGAC | 8 cut(s) | 1169, 1653, 1660, 2074, 2438, 3208, 3252, 4592 |
| BsmI | GAATGC | 3 cut(s) | 1022, 2097, 5259 |
| Bso31I | GGTCTC | 1 cut(s) | 455 |
| Bsp119I | TTCGAA | 1 cut(s) | 550 |
| Bsp1286I | GDGCHC | 4 cut(s) | 243, 759, 3891, 4691 |
| Bsp1407I | TGTACA | 1 cut(s) | 4883 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3349, 4938 |
| Bsp19I | CCATGG | 1 cut(s) | 876 |
| BspDI | ATCGAT | 3 cut(s) | 136, 1552, 3555 |
| BspFNI | CGCG | 3 cut(s) | 149, 216, 237 |
| BspHI | TCATGA | 1 cut(s) | 2101 |
| BspLI | GGNNCC | 8 cut(s) | 6, 430, 1969, 2391, 4023, 4309, 4410, 4965 |
| BspMAI | CTGCAG | 1 cut(s) | 1291 |
| BspMI | ACCTGC | 2 cut(s) | 3547, 4589 |
| BspPI | GGATC | 7 cut(s) | 1289, 2316, 2769, 4302, 4315, 4403, 4416 |
| BspQI | GCTCTTC | 2 cut(s) | 1947, 3879 |
| BspT104I | TTCGAA | 1 cut(s) | 550 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTI | CTTAAG | 2 cut(s) | 1664, 3235 |
| BspTNI | GGTCTC | 1 cut(s) | 455 |
| BsrDI | GCAATG | 6 cut(s) | 631, 1356, 4578, 4745, 5070, 5077 |
| BsrFI | RCCGGY | 3 cut(s) | 286, 1516, 5348 |
| BsrGI | TGTACA | 1 cut(s) | 4883 |
| BssAI | RCCGGY | 3 cut(s) | 286, 1516, 5348 |
| BssHII | GCGCGC | 1 cut(s) | 214 |
| BssNI | GRCGYC | 4 cut(s) | 5, 156, 1649, 3619 |
| BssT1I | CCWWGG | 7 cut(s) | 876, 1971, 2393, 2700, 3159, 3799, 4622 |
| Bst2UI | CCWGG | 7 cut(s) | 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| Bst6I | CTCTTC | 8 cut(s) | 48, 189, 913, 1947, 2744, 3396, 3492, 3879 |
| BstACI | GRCGYC | 4 cut(s) | 5, 156, 1649, 3619 |
| BstAFI | CTTAAG | 2 cut(s) | 1664, 3235 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2147, 3088, 3218, 4559 |
| BstAUI | TGTACA | 1 cut(s) | 4883 |
| BstBAI | YACGTR | 2 cut(s) | 822, 4556 |
| BstBI | TTCGAA | 1 cut(s) | 550 |
| BstDSI | CCRYGG | 6 cut(s) | 19, 219, 384, 876, 3492, 4671 |
| BstFNI | CGCG | 3 cut(s) | 149, 216, 237 |
| BstH2I | RGCGCY | 2 cut(s) | 8, 2576 |
| BstHHI | GCGC | 8 cut(s) | 7, 216, 218, 346, 355, 2040, 2575, 4096 |
| BstMCI | CGRYCG | 2 cut(s) | 390, 5279 |
| BstNI | CCWGG | 7 cut(s) | 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| BstNSI | RCATGY | 8 cut(s) | 258, 1820, 2054, 2850, 2927, 3491, 5129, 5310 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 188 |
| BstSCI | CCNGG | 8 cut(s) | 346, 944, 2910, 3453, 4027, 4648, 4654, 4894 |
| BstSFI | CTRYAG | 4 cut(s) | 1287, 1776, 2643, 3975 |
| BstUI | CGCG | 3 cut(s) | 149, 216, 237 |
| BstV2I | GAAGAC | 3 cut(s) | 2021, 3360, 4263 |
| BstX2I | RGATCY | 4 cut(s) | 2308, 2761, 4307, 4408 |
| BstYI | RGATCY | 4 cut(s) | 2308, 2761, 4307, 4408 |
| BstZI | CGGCCG | 1 cut(s) | 387 |
| Bsu15I | ATCGAT | 3 cut(s) | 136, 1552, 3555 |
| BsuTUI | ATCGAT | 3 cut(s) | 136, 1552, 3555 |
| BtgI | CCRYGG | 6 cut(s) | 19, 219, 384, 876, 3492, 4671 |
| BtrI | CACGTC | 1 cut(s) | 445 |
| BtsI | GCAGTG | 7 cut(s) | 115, 1284, 1882, 2148, 2868, 3635, 3783 |
| BveI | ACCTGC | 2 cut(s) | 3547, 4589 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1874, 4034, 4655, 5381 |
| CciI | TCATGA | 1 cut(s) | 2101 |
| CfoI | GCGC | 8 cut(s) | 7, 216, 218, 346, 355, 2040, 2575, 4096 |
| Cfr10I | RCCGGY | 3 cut(s) | 286, 1516, 5348 |
| ClaI | ATCGAT | 3 cut(s) | 136, 1552, 3555 |
| CseI | GACGC | 6 cut(s) | 155, 166, 243, 264, 1657, 3608 |
| CsiI | ACCWGGT | 1 cut(s) | 4027 |
| Csp6I | GTAC | 9 cut(s) | 830, 1924, 3148, 3422, 3804, 4032, 4659, 4759, 4884 |
| CspAI | ACCGGT | 1 cut(s) | 5348 |
| CviQI | GTAC | 9 cut(s) | 830, 1924, 3148, 3422, 3804, 4032, 4659, 4759, 4884 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DraIII | CACNNNGTG | 1 cut(s) | 2374 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1163 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1163 |
| EaeI | YGGCCR | 1 cut(s) | 387 |
| EagI | CGGCCG | 1 cut(s) | 387 |
| Eam1104I | CTCTTC | 8 cut(s) | 48, 189, 913, 1947, 2744, 3396, 3492, 3879 |
| EarI | CTCTTC | 8 cut(s) | 48, 189, 913, 1947, 2744, 3396, 3492, 3879 |
| EciI | GGCGGA | 3 cut(s) | 167, 602, 700 |
| Ecl136II | GAGCTC | 1 cut(s) | 757 |
| EclXI | CGGCCG | 1 cut(s) | 387 |
| Eco130I | CCWWGG | 7 cut(s) | 876, 1971, 2393, 2700, 3159, 3799, 4622 |
| Eco147I | AGGCCT | 2 cut(s) | 2699, 2910 |
| Eco24I | GRGCYC | 2 cut(s) | 759, 3891 |
| Eco31I | GGTCTC | 1 cut(s) | 455 |
| Eco32I | GATATC | 2 cut(s) | 2707, 2939 |
| Eco47I | GGWCC | 6 cut(s) | 295, 1998, 2600, 2852, 4195, 5099 |
| Eco52I | CGGCCG | 1 cut(s) | 387 |
| Eco53kI | GAGCTC | 1 cut(s) | 757 |
| Eco57I | CTGAAG | 7 cut(s) | 840, 1485, 1953, 2120, 3684, 3903, 5191 |
| Eco72I | CACGTG | 2 cut(s) | 822, 4556 |
| EcoICRI | GAGCTC | 1 cut(s) | 757 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4652 |
| EcoRI | GAATTC | 1 cut(s) | 1224 |
| EcoRII | CCWGG | 7 cut(s) | 944, 2910, 3453, 4027, 4648, 4654, 4894 |
| EcoRV | GATATC | 2 cut(s) | 2707, 2939 |
| EcoT14I | CCWWGG | 7 cut(s) | 876, 1971, 2393, 2700, 3159, 3799, 4622 |
| EcoT22I | ATGCAT | 2 cut(s) | 2019, 3214 |
| EcoT38I | GRGCYC | 2 cut(s) | 759, 3891 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 7 cut(s) | 876, 1971, 2393, 2700, 3159, 3799, 4622 |
| Esp3I | CGTCTC | 3 cut(s) | 163, 435, 4397 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 603, 635, 1926, 1958, 5031, 5063 |
| FaqI | GGGAC | 8 cut(s) | 1169, 1653, 1660, 2074, 2438, 3208, 3252, 4592 |
| FauI | CCCGC | 3 cut(s) | 3627, 4811, 5108 |
| FauNDI | CATATG | 2 cut(s) | 1527, 3610 |
| FbaI | TGATCA | 2 cut(s) | 592, 1429 |
| FblI | GTMKAC | 2 cut(s) | 3866, 5275 |
| FriOI | GRGCYC | 2 cut(s) | 759, 3891 |
| FspI | TGCGCA | 1 cut(s) | 354 |
| GlaI | GCGC | 8 cut(s) | 6, 215, 217, 345, 354, 2039, 2574, 4095 |
| GsaI | CCCAGC | 1 cut(s) | 2213 |
| GsuI | CTGGAG | 5 cut(s) | 1257, 2297, 2682, 4236, 4977 |
| HaeII | RGCGCY | 2 cut(s) | 8, 2576 |
| HapII | CCGG | 8 cut(s) | 287, 347, 426, 1100, 1517, 2622, 3473, 5349 |
| HgaI | GACGC | 6 cut(s) | 155, 166, 243, 264, 1657, 3608 |
| HhaI | GCGC | 8 cut(s) | 7, 216, 218, 346, 355, 2040, 2575, 4096 |
| Hin1I | GRCGYC | 4 cut(s) | 5, 156, 1649, 3619 |
| Hin6I | GCGC | 8 cut(s) | 5, 214, 216, 344, 353, 2038, 2573, 4094 |
| HinP1I | GCGC | 8 cut(s) | 5, 214, 216, 344, 353, 2038, 2573, 4094 |
| HincII | GTYRAC | 3 cut(s) | 1318, 3478, 5276 |
| HindII | GTYRAC | 3 cut(s) | 1318, 3478, 5276 |
| HindIII | AAGCTT | 9 cut(s) | 488, 617, 648, 1195, 1787, 2060, 2949, 3042, 3098 |
| HpaII | CCGG | 8 cut(s) | 287, 347, 426, 1100, 1517, 2622, 3473, 5349 |
| Hpy99I | CGWCG | 6 cut(s) | 265, 280, 710, 1049, 1606, 4195 |
| HpyCH4IV | ACGT | 8 cut(s) | 156, 185, 228, 444, 821, 2471, 4555, 5368 |
| HpySE526I | ACGT | 8 cut(s) | 156, 185, 228, 444, 821, 2471, 4555, 5368 |
| Hsp92I | GRCGYC | 4 cut(s) | 5, 156, 1649, 3619 |
| HspAI | GCGC | 8 cut(s) | 5, 214, 216, 344, 353, 2038, 2573, 4094 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| KroI | GCCGGC | 1 cut(s) | 286 |
| KroNI | GCCGGC | 1 cut(s) | 288 |
| Ksp22I | TGATCA | 2 cut(s) | 592, 1429 |
| LguI | GCTCTTC | 2 cut(s) | 1947, 3879 |
| MabI | ACCWGGT | 1 cut(s) | 4027 |
| MaeII | ACGT | 8 cut(s) | 156, 185, 228, 444, 821, 2471, 4555, 5368 |
| MfeI | CAATTG | 4 cut(s) | 2184, 3021, 4110, 4611 |
| MflI | RGATCY | 4 cut(s) | 2308, 2761, 4307, 4408 |
| MhlI | GDGCHC | 4 cut(s) | 243, 759, 3891, 4691 |
| MluI | ACGCGT | 1 cut(s) | 235 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 7 cut(s) | 449, 3164, 3190, 3374, 3855, 4430, 5239 |
| MmeI | TCCRAC | 3 cut(s) | 402, 1976, 4464 |
| Mph1103I | ATGCAT | 2 cut(s) | 2019, 3214 |
| MroNI | GCCGGC | 1 cut(s) | 286 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1022, 4795, 5204 |
| MslI | CAYNNNNRTG | 5 cut(s) | 86, 1172, 1734, 3237, 4980 |
| MspA1I | CMGCKG | 4 cut(s) | 992, 3602, 4314, 5006 |
| MspCI | CTTAAG | 2 cut(s) | 1664, 3235 |
| MspI | CCGG | 8 cut(s) | 287, 347, 426, 1100, 1517, 2622, 3473, 5349 |
| MspR9I | CCNGG | 8 cut(s) | 348, 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| MunI | CAATTG | 4 cut(s) | 2184, 3021, 4110, 4611 |
| Mva1269I | GAATGC | 3 cut(s) | 1022, 2097, 5259 |
| MvaI | CCWGG | 7 cut(s) | 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| MvnI | CGCG | 3 cut(s) | 149, 216, 237 |
| NaeI | GCCGGC | 1 cut(s) | 288 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NciI | CCSGG | 1 cut(s) | 348 |
| NcoI | CCATGG | 1 cut(s) | 876 |
| NdeI | CATATG | 2 cut(s) | 1527, 3610 |
| NgoMIV | GCCGGC | 1 cut(s) | 286 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 430, 1969, 2391, 4023, 4309, 4410, 4965 |
| NmeAIII | GCCGAG | 1 cut(s) | 2955 |
| NmuCI | GTSAC | 9 cut(s) | 695, 1165, 2366, 2467, 3563, 3683, 4433, 5302, 5344 |
| NsbI | TGCGCA | 1 cut(s) | 354 |
| NsiI | ATGCAT | 2 cut(s) | 2019, 3214 |
| NspI | RCATGY | 8 cut(s) | 258, 1820, 2054, 2850, 2927, 3491, 5129, 5310 |
| NspV | TTCGAA | 1 cut(s) | 550 |
| OliI | CACNNNNGTG | 1 cut(s) | 3237 |
| PaeI | GCATGC | 2 cut(s) | 258, 3491 |
| PagI | TCATGA | 1 cut(s) | 2101 |
| PasI | CCCWGGG | 1 cut(s) | 945 |
| PauI | GCGCGC | 1 cut(s) | 214 |
| PceI | AGGCCT | 2 cut(s) | 2699, 2910 |
| PciI | ACATGT | 2 cut(s) | 2846, 5306 |
| PciSI | GCTCTTC | 2 cut(s) | 1947, 3879 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 153, 234 |
| PctI | GAATGC | 3 cut(s) | 1022, 2097, 5259 |
| PdiI | GCCGGC | 1 cut(s) | 288 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1022, 4795, 5204 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1991, 4655 |
| PfoI | TCCNGGA | 1 cut(s) | 3453 |
| PinAI | ACCGGT | 1 cut(s) | 5348 |
| PleI | GAGTC | 7 cut(s) | 449, 3163, 3190, 3373, 3854, 4430, 5239 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PmaCI | CACGTG | 2 cut(s) | 822, 4556 |
| PmlI | CACGTG | 2 cut(s) | 822, 4556 |
| PpsI | GAGTC | 7 cut(s) | 449, 3163, 3190, 3373, 3854, 4430, 5239 |
| Ppu21I | YACGTR | 2 cut(s) | 822, 4556 |
| PscI | ACATGT | 2 cut(s) | 2846, 5306 |
| PshAI | GACNNNNGTC | 1 cut(s) | 188 |
| PshBI | ATTAAT | 1 cut(s) | 1071 |
| Psp124BI | GAGCTC | 1 cut(s) | 759 |
| Psp1406I | AACGTT | 1 cut(s) | 5368 |
| Psp6I | CCWGG | 7 cut(s) | 944, 2910, 3453, 4027, 4648, 4654, 4894 |
| PspCI | CACGTG | 2 cut(s) | 822, 4556 |
| PspFI | CCCAGC | 1 cut(s) | 2209 |
| PspGI | CCWGG | 7 cut(s) | 944, 2910, 3453, 4027, 4648, 4654, 4894 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 430, 1969, 2391, 4023, 4309, 4410, 4965 |
| PstI | CTGCAG | 1 cut(s) | 1291 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1874, 4034, 4655, 5381 |
| PsuI | RGATCY | 4 cut(s) | 2308, 2761, 4307, 4408 |
| PteI | GCGCGC | 1 cut(s) | 214 |
| PvuII | CAGCTG | 2 cut(s) | 992, 3602 |
| RsaI | GTAC | 9 cut(s) | 831, 1925, 3149, 3423, 3805, 4033, 4660, 4760, 4885 |
| RsaNI | GTAC | 9 cut(s) | 830, 1924, 3148, 3422, 3804, 4032, 4659, 4759, 4884 |
| RseI | CAYNNNNRTG | 5 cut(s) | 86, 1172, 1734, 3237, 4980 |
| SacI | GAGCTC | 1 cut(s) | 759 |
| SalI | GTCGAC | 1 cut(s) | 5274 |
| SapI | GCTCTTC | 2 cut(s) | 1947, 3879 |
| ScaI | AGTACT | 2 cut(s) | 1925, 3149 |
| SchI | GAGTC | 7 cut(s) | 449, 3164, 3190, 3374, 3855, 4430, 5239 |
| ScrFI | CCNGG | 8 cut(s) | 348, 946, 2912, 3455, 4029, 4650, 4656, 4896 |
| SduI | GDGCHC | 4 cut(s) | 243, 759, 3891, 4691 |
| SexAI | ACCWGGT | 1 cut(s) | 4027 |
| SfcI | CTRYAG | 4 cut(s) | 1287, 1776, 2643, 3975 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| SfuI | TTCGAA | 1 cut(s) | 550 |
| SinI | GGWCC | 6 cut(s) | 295, 1998, 2600, 2852, 4195, 5099 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 86, 1172, 1734, 3237, 4980 |
| SmlI | CTYRAG | 8 cut(s) | 167, 414, 485, 1664, 1790, 2807, 3143, 3235 |
| SmoI | CTYRAG | 8 cut(s) | 167, 414, 485, 1664, 1790, 2807, 3143, 3235 |
| SpeI | ACTAGT | 1 cut(s) | 4811 |
| SphI | GCATGC | 2 cut(s) | 258, 3491 |
| SseBI | AGGCCT | 2 cut(s) | 2699, 2910 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SstI | GAGCTC | 1 cut(s) | 759 |
| StuI | AGGCCT | 2 cut(s) | 2699, 2910 |
| StyD4I | CCNGG | 8 cut(s) | 346, 944, 2910, 3453, 4027, 4648, 4654, 4894 |
| StyI | CCWWGG | 7 cut(s) | 876, 1971, 2393, 2700, 3159, 3799, 4622 |
| TaiI | ACGT | 8 cut(s) | 159, 188, 231, 447, 824, 2474, 4558, 5371 |
| TaqII | GACCGA | 1 cut(s) | 479 |
| TatI | WGTACW | 4 cut(s) | 1923, 3147, 3421, 4883 |
| TauI | GCSGC | 7 cut(s) | 152, 392, 395, 560, 685, 2153, 3619 |
| TseFI | GTSAC | 9 cut(s) | 695, 1165, 2366, 2467, 3563, 3683, 4433, 5302, 5344 |
| Tsp45I | GTSAC | 9 cut(s) | 695, 1165, 2366, 2467, 3563, 3683, 4433, 5302, 5344 |
| TspGWI | ACGGA | 9 cut(s) | 793, 2316, 2810, 3832, 4208, 4320, 4374, 4421, 4421 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1991, 4655 |
| Vha464I | CTTAAG | 2 cut(s) | 1664, 3235 |
| VpaK11BI | GGWCC | 6 cut(s) | 295, 1998, 2600, 2852, 4195, 5099 |
| VspI | ATTAAT | 1 cut(s) | 1071 |
| XapI | RAATTY | 7 cut(s) | 929, 1224, 3084, 3514, 3970, 4043, 4970 |
| XceI | RCATGY | 8 cut(s) | 258, 1820, 2054, 2850, 2927, 3491, 5129, 5310 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3671 |
| XmiI | GTMKAC | 2 cut(s) | 3866, 5275 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1022, 4795, 5204 |
| ZraI | GACGTC | 1 cut(s) | 157 |
| ZrmI | AGTACT | 2 cut(s) | 1925, 3149 |
| Zsp2I | ATGCAT | 2 cut(s) | 2019, 3214 |