Clustered mitochondria protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01320 AT1G01320 AT1G01320 |
| fragaria_vesca | FvH4_7g16420 FvH4_7g16420 |
| malus_domestica | MD01G1080500.v1.1 MD07G1149400.v1.1 |
| prunus_persica | Prupe.2G188000_v2.0.a1 Prupe.2G188000_v2.0.a1 |
| pyrus_communis | pycom01g10860 pycom03g14110 pycom07g14800 pycom14g11950 |
| rosa_chinensis | RchiOBHm_Chr1g0359431 RchiOBHm_Chr1g0359451 |
| rosa_laevigata | RLG00000027870 |
| rosa_multiflora | Rmu_ssc0000358.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00297010 |
| rosa_rugosa | Rorug01G0271200 Rorug01G0271300 |
| rosa_samantha | Rh1AG284600 Rh1BG250600 Rh1CG268700 Rh1DG279700 |
| rosa_wichuraiana | Rw1G025280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1259 |
| AatII | GACGTC | 1 cut(s) | 5279 |
| Acc16I | TGCGCA | 1 cut(s) | 447 |
| AccB1I | GGYRCC | 3 cut(s) | 4, 1541, 3482 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2198, 3479, 4877 |
| AccI | GTMKAC | 3 cut(s) | 4079, 4683, 5497 |
| AccII | CGCG | 1 cut(s) | 309 |
| AclWI | GGATC | 7 cut(s) | 1030, 1385, 2973, 4527, 4540, 4625, 4638 |
| AcoI | YGGCCR | 1 cut(s) | 4847 |
| AcsI | RAATTY | 8 cut(s) | 1025, 1320, 1517, 3288, 3727, 4183, 4256, 5192 |
| AcuI | CTGAAG | 7 cut(s) | 281, 1581, 2160, 2327, 3897, 4347, 5413 |
| AcvI | CACGTG | 2 cut(s) | 918, 4778 |
| AcyI | GRCGYC | 3 cut(s) | 5, 3832, 5276 |
| AdeI | CACNNNGTG | 2 cut(s) | 2581, 3706 |
| AflII | CTTAAG | 2 cut(s) | 1871, 3439 |
| AflIII | ACRYGT | 4 cut(s) | 249, 915, 3050, 3127 |
| AjiI | CACGTC | 3 cut(s) | 250, 541, 3901 |
| AjnI | CCWGG | 7 cut(s) | 2904, 3114, 3666, 4240, 4870, 4876, 5116 |
| AleI | CACNNNNGTG | 1 cut(s) | 3441 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4284, 4316 |
| Alw21I | GWGCWC | 3 cut(s) | 855, 3031, 4913 |
| AlwI | GGATC | 7 cut(s) | 1030, 1385, 2973, 4527, 4540, 4625, 4638 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 2081, 4877, 5470, 5603 |
| Ama87I | CYCGRG | 2 cut(s) | 4710, 5090 |
| AoxI | GGCC | 9 cut(s) | 3112, 3181, 3307, 3433, 3962, 4171, 4847, 4874, 5114 |
| ApoI | RAATTY | 8 cut(s) | 1025, 1320, 1517, 3288, 3727, 4183, 4256, 5192 |
| AseI | ATTAAT | 1 cut(s) | 3927 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1118, 5426 |
| AspLEI | GCGC | 9 cut(s) | 7, 309, 311, 319, 439, 448, 943, 1357, 2247 |
| AsuC2I | CCSGG | 1 cut(s) | 3185 |
| AsuHPI | GGTGA | 8 cut(s) | 721, 939, 2181, 3788, 4149, 4755, 4913, 5411 |
| AsuII | TTCGAA | 2 cut(s) | 646, 3372 |
| AvaI | CYCGRG | 2 cut(s) | 4710, 5090 |
| AvaII | GGWCC | 6 cut(s) | 388, 2205, 2804, 3056, 3187, 5321 |
| BalI | TGGCCA | 1 cut(s) | 4849 |
| BamHI | GGATCC | 2 cut(s) | 4532, 4630 |
| BanI | GGYRCC | 3 cut(s) | 4, 1541, 3482 |
| BanII | GRGCYC | 2 cut(s) | 855, 4104 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1963, 1995 |
| BauI | CACGAG | 1 cut(s) | 1657 |
| BbrPI | CACGTG | 2 cut(s) | 918, 4778 |
| BbsI | GAAGAC | 3 cut(s) | 2228, 3573, 4488 |
| Bbv12I | GWGCWC | 3 cut(s) | 855, 3031, 4913 |
| BbvCI | CCTCAGC | 2 cut(s) | 3696, 4741 |
| BceAI | ACGGC | 7 cut(s) | 3, 250, 330, 476, 677, 830, 2345 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 326, 360, 626, 660, 1523, 1557 |
| BciT130I | CCWGG | 7 cut(s) | 2906, 3116, 3668, 4242, 4872, 4878, 5118 |
| BciVI | GTATCC | 1 cut(s) | 1755 |
| BclI | TGATCA | 2 cut(s) | 688, 1525 |
| BcnI | CCSGG | 1 cut(s) | 3185 |
| BfmI | CTRYAG | 2 cut(s) | 1383, 2847 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BfrI | CTTAAG | 2 cut(s) | 1871, 3439 |
| BfuI | GTATCC | 1 cut(s) | 1755 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1169 |
| BglII | AGATCT | 1 cut(s) | 456 |
| BlpI | GCTNAGC | 3 cut(s) | 1698, 3562, 5160 |
| BmcAI | AGTACT | 1 cut(s) | 3353 |
| Bme1390I | CCNGG | 8 cut(s) | 2906, 3116, 3185, 3668, 4242, 4872, 4878, 5118 |
| Bme18I | GGWCC | 6 cut(s) | 388, 2205, 2804, 3056, 3187, 5321 |
| BmeT110I | CYCGRG | 2 cut(s) | 4710, 5090 |
| BmgBI | CACGTC | 3 cut(s) | 250, 541, 3901 |
| BmrFI | CCNGG | 8 cut(s) | 2906, 3116, 3185, 3668, 4242, 4872, 4878, 5118 |
| BmrI | ACTGGG | 4 cut(s) | 2657, 4169, 4261, 4716 |
| BmuI | ACTGGG | 4 cut(s) | 2657, 4169, 4261, 4716 |
| BpiI | GAAGAC | 3 cut(s) | 2228, 3573, 4488 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3662, 3694 |
| BpmI | CTGGAG | 4 cut(s) | 1353, 2504, 2886, 5199 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3696, 4741 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1698, 3562, 5160 |
| Bpu14I | TTCGAA | 2 cut(s) | 646, 3372 |
| BpuEI | CTTGAG | 6 cut(s) | 495, 566, 1724, 2018, 2996, 3368 |
| BpuMI | CCSGG | 1 cut(s) | 3185 |
| Bsa29I | ATCGAT | 2 cut(s) | 147, 1648 |
| BsaAI | YACGTR | 4 cut(s) | 918, 2564, 4426, 4778 |
| BsaBI | GATNNNNATC | 1 cut(s) | 153 |
| BsaHI | GRCGYC | 3 cut(s) | 5, 3832, 5276 |
| BsaI | GGTCTC | 1 cut(s) | 551 |
| BsaWI | WCCGGW | 5 cut(s) | 425, 521, 1195, 4439, 4786 |
| Bse118I | RCCGGY | 3 cut(s) | 379, 439, 1612 |
| Bse3DI | GCAATG | 6 cut(s) | 727, 1452, 2461, 4800, 4967, 5292 |
| Bse8I | GATNNNNATC | 1 cut(s) | 153 |
| BseBI | CCWGG | 7 cut(s) | 2906, 3116, 3668, 4242, 4872, 4878, 5118 |
| BseCI | ATCGAT | 2 cut(s) | 147, 1648 |
| BseJI | GATNNNNATC | 1 cut(s) | 153 |
| BseMI | GCAATG | 6 cut(s) | 727, 1452, 2461, 4800, 4967, 5292 |
| BsePI | GCGCGC | 1 cut(s) | 307 |
| BseRI | GAGGAG | 6 cut(s) | 1106, 1727, 2560, 3672, 4903, 4929 |
| BseYI | CCCAGC | 1 cut(s) | 2416 |
| BsgI | GTGCAG | 4 cut(s) | 334, 1196, 2312, 4758 |
| Bsh1236I | CGCG | 1 cut(s) | 309 |
| Bsh1285I | CGRYCG | 2 cut(s) | 483, 5501 |
| BshFI | GGCC | 9 cut(s) | 3114, 3183, 3309, 3435, 3964, 4173, 4849, 4876, 5116 |
| BshNI | GGYRCC | 3 cut(s) | 4, 1541, 3482 |
| BshVI | ATCGAT | 2 cut(s) | 147, 1648 |
| BsiEI | CGRYCG | 2 cut(s) | 483, 5501 |
| BsiHKAI | GWGCWC | 3 cut(s) | 855, 3031, 4913 |
| BsiHKCI | CYCGRG | 2 cut(s) | 4710, 5090 |
| BsiSI | CCGG | 9 cut(s) | 380, 426, 440, 522, 1196, 1613, 3185, 4440, 4787 |
| BslFI | GGGAC | 9 cut(s) | 563, 1265, 1860, 1867, 2281, 2645, 3412, 4728, 4814 |
| BsmBI | CGTCTC | 2 cut(s) | 531, 4619 |
| BsmFI | GGGAC | 9 cut(s) | 563, 1265, 1860, 1867, 2281, 2645, 3412, 4728, 4814 |
| BsmI | GAATGC | 3 cut(s) | 1118, 2304, 5481 |
| BsnI | GGCC | 9 cut(s) | 3114, 3183, 3309, 3435, 3964, 4173, 4849, 4876, 5116 |
| Bso31I | GGTCTC | 1 cut(s) | 551 |
| BsoBI | CYCGRG | 2 cut(s) | 4710, 5090 |
| Bsp119I | TTCGAA | 2 cut(s) | 646, 3372 |
| Bsp1286I | GDGCHC | 4 cut(s) | 855, 3031, 4104, 4913 |
| Bsp1407I | TGTACA | 1 cut(s) | 3124 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1698, 3562, 5160 |
| BspANI | GGCC | 9 cut(s) | 3114, 3183, 3309, 3435, 3964, 4173, 4849, 4876, 5116 |
| BspDI | ATCGAT | 2 cut(s) | 147, 1648 |
| BspFNI | CGCG | 1 cut(s) | 309 |
| BspHI | TCATGA | 3 cut(s) | 211, 2308, 4309 |
| BspMAI | CTGCAG | 1 cut(s) | 1387 |
| BspPI | GGATC | 7 cut(s) | 1030, 1385, 2973, 4527, 4540, 4625, 4638 |
| BspQI | GCTCTTC | 3 cut(s) | 2154, 2692, 4092 |
| BspT104I | TTCGAA | 2 cut(s) | 646, 3372 |
| BspT107I | GGYRCC | 3 cut(s) | 4, 1541, 3482 |
| BspTI | CTTAAG | 2 cut(s) | 1871, 3439 |
| BspTNI | GGTCTC | 1 cut(s) | 551 |
| BsrDI | GCAATG | 6 cut(s) | 727, 1452, 2461, 4800, 4967, 5292 |
| BsrFI | RCCGGY | 3 cut(s) | 379, 439, 1612 |
| BsrGI | TGTACA | 1 cut(s) | 3124 |
| BssAI | RCCGGY | 3 cut(s) | 379, 439, 1612 |
| BssHII | GCGCGC | 1 cut(s) | 307 |
| BssNI | GRCGYC | 3 cut(s) | 5, 3832, 5276 |
| BssSI | CACGAG | 1 cut(s) | 1657 |
| BssT1I | CCWWGG | 7 cut(s) | 1040, 2178, 2600, 3363, 4012, 4611, 4844 |
| Bst2BI | CACGAG | 1 cut(s) | 1657 |
| Bst2UI | CCWGG | 7 cut(s) | 2906, 3116, 3668, 4242, 4872, 4878, 5118 |
| BstACI | GRCGYC | 3 cut(s) | 5, 3832, 5276 |
| BstAFI | CTTAAG | 2 cut(s) | 1871, 3439 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 2354, 3292, 3422, 4781, 5470 |
| BstAUI | TGTACA | 1 cut(s) | 3124 |
| BstBAI | YACGTR | 4 cut(s) | 918, 2564, 4426, 4778 |
| BstBI | TTCGAA | 2 cut(s) | 646, 3372 |
| BstDSI | CCRYGG | 4 cut(s) | 19, 312, 972, 4893 |
| BstFNI | CGCG | 1 cut(s) | 309 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 9 cut(s) | 7, 309, 311, 319, 439, 448, 943, 1357, 2247 |
| BstMCI | CGRYCG | 2 cut(s) | 483, 5501 |
| BstNI | CCWGG | 7 cut(s) | 2906, 3116, 3668, 4242, 4872, 4878, 5118 |
| BstNSI | RCATGY | 6 cut(s) | 1064, 1184, 2261, 3054, 3131, 5351 |
| BstSCI | CCNGG | 8 cut(s) | 2904, 3114, 3183, 3666, 4240, 4870, 4876, 5116 |
| BstSFI | CTRYAG | 2 cut(s) | 1383, 2847 |
| BstUI | CGCG | 1 cut(s) | 309 |
| BstV2I | GAAGAC | 3 cut(s) | 2228, 3573, 4488 |
| BstX2I | RGATCY | 4 cut(s) | 456, 2965, 4532, 4630 |
| BstYI | RGATCY | 4 cut(s) | 456, 2965, 4532, 4630 |
| Bsu15I | ATCGAT | 2 cut(s) | 147, 1648 |
| BsuI | GTATCC | 1 cut(s) | 1755 |
| BsuRI | GGCC | 9 cut(s) | 3114, 3183, 3309, 3435, 3964, 4173, 4849, 4876, 5116 |
| BsuTUI | ATCGAT | 2 cut(s) | 147, 1648 |
| BtgI | CCRYGG | 4 cut(s) | 19, 312, 972, 4893 |
| BtgZI | GCGATG | 1 cut(s) | 3512 |
| BtrI | CACGTC | 3 cut(s) | 250, 541, 3901 |
| BtsI | GCAGTG | 4 cut(s) | 1380, 2355, 3072, 3996 |
| CaiI | CAGNNNCTG | 4 cut(s) | 2081, 4877, 5470, 5603 |
| CciI | TCATGA | 3 cut(s) | 211, 2308, 4309 |
| CfoI | GCGC | 9 cut(s) | 7, 309, 311, 319, 439, 448, 943, 1357, 2247 |
| Cfr10I | RCCGGY | 3 cut(s) | 379, 439, 1612 |
| ClaI | ATCGAT | 2 cut(s) | 147, 1648 |
| CseI | GACGC | 3 cut(s) | 336, 357, 3821 |
| CsiI | ACCWGGT | 1 cut(s) | 4240 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1317, 1352 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DraIII | CACNNNGTG | 2 cut(s) | 2581, 3706 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1259 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1259 |
| EaeI | YGGCCR | 1 cut(s) | 4847 |
| EciI | GGCGGA | 1 cut(s) | 698 |
| Ecl136II | GAGCTC | 1 cut(s) | 853 |
| Eco130I | CCWWGG | 7 cut(s) | 1040, 2178, 2600, 3363, 4012, 4611, 4844 |
| Eco147I | AGGCCT | 1 cut(s) | 3114 |
| Eco24I | GRGCYC | 2 cut(s) | 855, 4104 |
| Eco31I | GGTCTC | 1 cut(s) | 551 |
| Eco32I | GATATC | 3 cut(s) | 2911, 3143, 3750 |
| Eco47I | GGWCC | 6 cut(s) | 388, 2205, 2804, 3056, 3187, 5321 |
| Eco53kI | GAGCTC | 1 cut(s) | 853 |
| Eco57I | CTGAAG | 7 cut(s) | 281, 1581, 2160, 2327, 3897, 4347, 5413 |
| Eco72I | CACGTG | 2 cut(s) | 918, 4778 |
| Eco88I | CYCGRG | 2 cut(s) | 4710, 5090 |
| EcoICRI | GAGCTC | 1 cut(s) | 853 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4874 |
| EcoRI | GAATTC | 1 cut(s) | 1320 |
| EcoRII | CCWGG | 7 cut(s) | 2904, 3114, 3666, 4240, 4870, 4876, 5116 |
| EcoRV | GATATC | 3 cut(s) | 2911, 3143, 3750 |
| EcoT14I | CCWWGG | 7 cut(s) | 1040, 2178, 2600, 3363, 4012, 4611, 4844 |
| EcoT22I | ATGCAT | 2 cut(s) | 2226, 3418 |
| EcoT38I | GRGCYC | 2 cut(s) | 855, 4104 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 7 cut(s) | 1040, 2178, 2600, 3363, 4012, 4611, 4844 |
| Esp3I | CGTCTC | 2 cut(s) | 531, 4619 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1107, 1139, 1677, 1709, 2133, 2165, 5253, 5285 |
| FaqI | GGGAC | 9 cut(s) | 563, 1265, 1860, 1867, 2281, 2645, 3412, 4728, 4814 |
| FauI | CCCGC | 5 cut(s) | 538, 774, 3840, 4813, 5033 |
| FauNDI | CATATG | 2 cut(s) | 3823, 5528 |
| FbaI | TGATCA | 2 cut(s) | 688, 1525 |
| FblI | GTMKAC | 3 cut(s) | 4079, 4683, 5497 |
| FriOI | GRGCYC | 2 cut(s) | 855, 4104 |
| FspI | TGCGCA | 1 cut(s) | 447 |
| GlaI | GCGC | 9 cut(s) | 6, 308, 310, 318, 438, 447, 942, 1356, 2246 |
| GsaI | CCCAGC | 1 cut(s) | 2420 |
| GsuI | CTGGAG | 4 cut(s) | 1353, 2504, 2886, 5199 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 9 cut(s) | 3114, 3183, 3309, 3435, 3964, 4173, 4849, 4876, 5116 |
| HapII | CCGG | 9 cut(s) | 380, 426, 440, 522, 1196, 1613, 3185, 4440, 4787 |
| HgaI | GACGC | 3 cut(s) | 336, 357, 3821 |
| HhaI | GCGC | 9 cut(s) | 7, 309, 311, 319, 439, 448, 943, 1357, 2247 |
| Hin1I | GRCGYC | 3 cut(s) | 5, 3832, 5276 |
| Hin6I | GCGC | 9 cut(s) | 5, 307, 309, 317, 437, 446, 941, 1355, 2245 |
| HinP1I | GCGC | 9 cut(s) | 5, 307, 309, 317, 437, 446, 941, 1355, 2245 |
| HincII | GTYRAC | 5 cut(s) | 496, 1414, 2031, 4997, 5498 |
| HindII | GTYRAC | 5 cut(s) | 496, 1414, 2031, 4997, 5498 |
| HindIII | AAGCTT | 9 cut(s) | 584, 713, 744, 1700, 1994, 2267, 3153, 3246, 3302 |
| HpaII | CCGG | 9 cut(s) | 380, 426, 440, 522, 1196, 1613, 3185, 4440, 4787 |
| HphI | GGTGA | 8 cut(s) | 721, 939, 2181, 3788, 4149, 4755, 4913, 5411 |
| Hpy99I | CGWCG | 3 cut(s) | 358, 373, 1145 |
| Hsp92I | GRCGYC | 3 cut(s) | 5, 3832, 5276 |
| HspAI | GCGC | 9 cut(s) | 5, 307, 309, 317, 437, 446, 941, 1355, 2245 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| KroI | GCCGGC | 1 cut(s) | 379 |
| KroNI | GCCGGC | 1 cut(s) | 381 |
| Ksp22I | TGATCA | 2 cut(s) | 688, 1525 |
| LguI | GCTCTTC | 3 cut(s) | 2154, 2692, 4092 |
| MabI | ACCWGGT | 1 cut(s) | 4240 |
| MfeI | CAATTG | 3 cut(s) | 230, 2391, 3225 |
| MflI | RGATCY | 4 cut(s) | 456, 2965, 4532, 4630 |
| MhlI | GDGCHC | 4 cut(s) | 855, 3031, 4104, 4913 |
| MlsI | TGGCCA | 1 cut(s) | 4849 |
| MluNI | TGGCCA | 1 cut(s) | 4849 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MmeI | TCCRAC | 4 cut(s) | 495, 2183, 4377, 4686 |
| Mox20I | TGGCCA | 1 cut(s) | 4849 |
| Mph1103I | ATGCAT | 2 cut(s) | 2226, 3418 |
| MroNI | GCCGGC | 1 cut(s) | 379 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1118, 5426 |
| MscI | TGGCCA | 1 cut(s) | 4849 |
| MslI | CAYNNNNRTG | 7 cut(s) | 86, 1268, 1941, 3092, 3441, 5202, 5438 |
| Msp20I | TGGCCA | 1 cut(s) | 4849 |
| MspA1I | CMGCKG | 7 cut(s) | 160, 781, 3815, 3844, 4539, 5040, 5574 |
| MspCI | CTTAAG | 2 cut(s) | 1871, 3439 |
| MspI | CCGG | 9 cut(s) | 380, 426, 440, 522, 1196, 1613, 3185, 4440, 4787 |
| MspR9I | CCNGG | 8 cut(s) | 2906, 3116, 3185, 3668, 4242, 4872, 4878, 5118 |
| MunI | CAATTG | 3 cut(s) | 230, 2391, 3225 |
| Mva1269I | GAATGC | 3 cut(s) | 1118, 2304, 5481 |
| MvaI | CCWGG | 7 cut(s) | 2906, 3116, 3668, 4242, 4872, 4878, 5118 |
| MvnI | CGCG | 1 cut(s) | 309 |
| NaeI | GCCGGC | 1 cut(s) | 381 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NciI | CCSGG | 1 cut(s) | 3185 |
| NdeI | CATATG | 2 cut(s) | 3823, 5528 |
| NgoMIV | GCCGGC | 1 cut(s) | 379 |
| NmeAIII | GCCGAG | 2 cut(s) | 1114, 3159 |
| NmuCI | GTSAC | 5 cut(s) | 791, 945, 1261, 2573, 3896 |
| NsbI | TGCGCA | 1 cut(s) | 447 |
| NsiI | ATGCAT | 2 cut(s) | 2226, 3418 |
| NspI | RCATGY | 6 cut(s) | 1064, 1184, 2261, 3054, 3131, 5351 |
| NspV | TTCGAA | 2 cut(s) | 646, 3372 |
| OliI | CACNNNNGTG | 1 cut(s) | 3441 |
| PagI | TCATGA | 3 cut(s) | 211, 2308, 4309 |
| PauI | GCGCGC | 1 cut(s) | 307 |
| PceI | AGGCCT | 1 cut(s) | 3114 |
| PciI | ACATGT | 2 cut(s) | 3050, 3127 |
| PciSI | GCTCTTC | 3 cut(s) | 2154, 2692, 4092 |
| PctI | GAATGC | 3 cut(s) | 1118, 2304, 5481 |
| PdiI | GCCGGC | 1 cut(s) | 381 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1118, 5426 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2198, 3479, 4877 |
| PfoI | TCCNGGA | 1 cut(s) | 3666 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PmaCI | CACGTG | 2 cut(s) | 918, 4778 |
| PmlI | CACGTG | 2 cut(s) | 918, 4778 |
| Ppu21I | YACGTR | 4 cut(s) | 918, 2564, 4426, 4778 |
| PscI | ACATGT | 2 cut(s) | 3050, 3127 |
| PshBI | ATTAAT | 1 cut(s) | 3927 |
| Psp124BI | GAGCTC | 1 cut(s) | 855 |
| Psp6I | CCWGG | 7 cut(s) | 2904, 3114, 3666, 4240, 4870, 4876, 5116 |
| PspCI | CACGTG | 2 cut(s) | 918, 4778 |
| PspFI | CCCAGC | 1 cut(s) | 2416 |
| PspGI | CCWGG | 7 cut(s) | 2904, 3114, 3666, 4240, 4870, 4876, 5116 |
| PstI | CTGCAG | 1 cut(s) | 1387 |
| PstNI | CAGNNNCTG | 4 cut(s) | 2081, 4877, 5470, 5603 |
| PsuI | RGATCY | 4 cut(s) | 456, 2965, 4532, 4630 |
| PteI | GCGCGC | 1 cut(s) | 307 |
| PvuII | CAGCTG | 3 cut(s) | 160, 3815, 5574 |
| RseI | CAYNNNNRTG | 7 cut(s) | 86, 1268, 1941, 3092, 3441, 5202, 5438 |
| SacI | GAGCTC | 1 cut(s) | 855 |
| SalI | GTCGAC | 1 cut(s) | 5496 |
| SapI | GCTCTTC | 3 cut(s) | 2154, 2692, 4092 |
| ScaI | AGTACT | 1 cut(s) | 3353 |
| ScrFI | CCNGG | 8 cut(s) | 2906, 3116, 3185, 3668, 4242, 4872, 4878, 5118 |
| SduI | GDGCHC | 4 cut(s) | 855, 3031, 4104, 4913 |
| SexAI | ACCWGGT | 1 cut(s) | 4240 |
| SfcI | CTRYAG | 2 cut(s) | 1383, 2847 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| SfuI | TTCGAA | 2 cut(s) | 646, 3372 |
| SinI | GGWCC | 6 cut(s) | 388, 2205, 2804, 3056, 3187, 5321 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 86, 1268, 1941, 3092, 3441, 5202, 5438 |
| SmlI | CTYRAG | 8 cut(s) | 510, 581, 1703, 1871, 1997, 3011, 3347, 3439 |
| SmoI | CTYRAG | 8 cut(s) | 510, 581, 1703, 1871, 1997, 3011, 3347, 3439 |
| SseBI | AGGCCT | 1 cut(s) | 3114 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspI | AATATT | 1 cut(s) | 3925 |
| SstI | GAGCTC | 1 cut(s) | 855 |
| StuI | AGGCCT | 1 cut(s) | 3114 |
| StyD4I | CCNGG | 8 cut(s) | 2904, 3114, 3183, 3666, 4240, 4870, 4876, 5116 |
| StyI | CCWWGG | 7 cut(s) | 1040, 2178, 2600, 3363, 4012, 4611, 4844 |
| TaqII | GACCGA | 1 cut(s) | 575 |
| TatI | WGTACW | 5 cut(s) | 3124, 3351, 3634, 4269, 4372 |
| TauI | GCSGC | 7 cut(s) | 488, 491, 656, 683, 1403, 3832, 3847 |
| TseFI | GTSAC | 5 cut(s) | 791, 945, 1261, 2573, 3896 |
| Tsp45I | GTSAC | 5 cut(s) | 791, 945, 1261, 2573, 3896 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2198, 3479, 4877 |
| Vha464I | CTTAAG | 2 cut(s) | 1871, 3439 |
| VpaK11BI | GGWCC | 6 cut(s) | 388, 2205, 2804, 3056, 3187, 5321 |
| VspI | ATTAAT | 1 cut(s) | 3927 |
| XapI | RAATTY | 8 cut(s) | 1025, 1320, 1517, 3288, 3727, 4183, 4256, 5192 |
| XbaI | TCTAGA | 1 cut(s) | 703 |
| XceI | RCATGY | 6 cut(s) | 1064, 1184, 2261, 3054, 3131, 5351 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 5239 |
| XmiI | GTMKAC | 3 cut(s) | 4079, 4683, 5497 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1118, 5426 |
| ZraI | GACGTC | 1 cut(s) | 5277 |
| ZrmI | AGTACT | 1 cut(s) | 3353 |
| Zsp2I | ATGCAT | 2 cut(s) | 2226, 3418 |