Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005859

Physical Location & Seq

Genomic Coordinates Forward (+)

761261 .. 766194

Gene Structure 4934 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G03160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGAGAACTCTAATCTCTCACCGGCAATGTGTGACGTCACCGTTTCTTATCTCCGCCGCATCTCCACCGTTTCCTGGCCGGTGCTTTAAGTTATCCTCCTTTACTCCTCCACGTCATAGGCGTTTTTCTTCTCTCTCGATCAGAAACATTTCGCATGAATCCGCCGATCAGACTTCTTCTTCTAGGCCGCGAACTCTTTATCCTGGTGGTTACAAGCGTCCCGAACTCGCCGTTCCCGGTTTACTTCTCCGGCTAGACGCCGACGAGGTTATGAGCGGGAATCGTGAAGAGACTCTTGATTTGGTCGACCGTGCTTTAGCTAAATCGGTTCAAATCGTCGTGATTGATGGCGGAGCCACCGCTGGTAAGCTCTACGAGGCGGCTTGTTTGCTGAAATCACTTGTCAAAGGCCGTGCTTACCTCTTGATCGCTGAACGTGTTGATATCGCCTCCGCCGTTGGTGCTAGTGGTGTTGCTCTCTCCGACGAAGGTCTTCCGGCGATTGTGGCGAGAAACACATTGATGGGATCCAACCCCGACTCGGTACTTCTTCCACTGGTAGCTCGGATTGTGAAGGATGTTGATTCTGCTCTAATTGCCTCAAGCTCCGAGGGTGCTGATTTCCTTATACTTGGATCTGGTGAAGAAGATACGCAAGTGGCGGATTCTTTGTTGAAGAGCGTGAAAATACCGATATATGTGACTTGCAGAGGCAATGAAGAAGCTAAAGAAGAATTGCAGTTACTGAAATCAGGTGTTTCTGGTTTTGTTATTTCGTTGAAAGATTTGCGTTCTTCTAGGGATGTAGCTCTTCGCCAGAGTCTTGATGGAGCTTATGTTGTAAATAATCATGAGACACAAAATATGAATGAACTGCCGGAGAAAAAGAATTCTGCTGGCTTCATAAAATTAGAGGACAAACAGAAACTAATAGTAGAAATGGAGAAATCTGTGTTGAGAGAGACGATTGAAATCATCCACAAGGCGGCTCCACTGATGGAGGAAGTCTCCCTTCTAATTGATGCTGTTTCTCGGATCGATGAGCCGTTTCTGATGGTTATAGTGGGGGAATTTAACTCTGGAAAATCAACGGTTATCAATGCACTTCTTGGGAAGAGATACCTGAAAGAAGGGGTAGTCCCCACTACCAATGAAATCACGTTTCTGTGCTACTCTGACTTGGAATCCGAAGAGCAACAACGTTGCCAAACACATCCAGATGGCCAATATGTATGCTATCTTCCTGCACCAATACTTAAGGATATAAATATTGTTGACACACCTGGGACCAATGTGATCCTTCAAAGGCAACAGCGTCTTACAGAAGAATTTGTTCCACGTGCAGATTTGCTTGTTTTTGTTCTTTCTGCTGACCGCCCTTTAACTGAAAGTGAGGTTGCGTTTCTCCGGTACACACAGCAGTGGAAAAAGAAATTTGTGTTTATTCTGAATAAATCTGATATCTATCGTGATGCTCGTGAGCTTGAGGAAGCTATTTCATTTGTTAAAGAGAATACACGGAAGTTGCTTAATACAGAAAATGTGATATTGTATCCGGTGTCCGCACGGTCTGCTCTTGAGGCGAAGCTTTCAACAGCTTCTTTGGTTGGCAGAGATGATCTTGAGATCGCAGATCCTGGTTCTAATTGGAGAGTCCAGAGCTTCAATGAACTTGAGAAATTTCTTTATAGCTTCTTGGATAGCTCAACAGCTACCGGGATGGAGAGAATAAGGCTTAAATTGGAGACACCCATGGCGATTGCTGAGCGTCTCCTTTCTTCTGTGGAAGCTCTTGTGAGACAAGATTGCCTAGCTGCTAGGGAAGACTTGGCTTCAGCAGACAAGATTATCAGTCGAACTAAAGAATACGCGCTTAAGATGGAATATGAGAGCATTTCTTGGAGAAGGCAGGCTCTCTCGTTGATTGATAATGCCAGATTACAAGTTGTTGATCTGATAGGAACTACCCTGCGACTATCAAGCCTTGATCTTGCGATCTCGTACGTGTTCAAAGGGGAAAAATCGGCCTCAGTAGCAGCTACATCCAAAGTTCAAGGTGAAATACTCGCTCCAGCACTCACAAATGCGAAAGAATTGCTTGGAAAATATGCTGAATGGCTACAATCAAATACTGCCCGTGAAGGGAGTCTGTCTCTGAAATCATTCGAAAACAAATGGCCAACATATGTCAATTCAAAAACGCAATTGGGCATAGACACATATGACTTACTTCAGAAAACTGATAAAGTCAGCTTGAAAACAATACAGAACTTGAGTGCCGGAACCACATCAAAACGATTGGAACAAGATATTCGAGAAGTGTTCTTTGTGACAGTTGGTGGGCTTGGAGCTGCAGGACTGTCTGCATCACTTCTAACCTCAGTGCTACCGACCACACTGGAAGATCTTCTTGCTCTTGGCCTTTGCTCCGCTGGAGGGTATGTGGCTATAGCAAACTTCCCATATCGAAGACAGGCTATAATTGGTAAGGTGAATAAAGTGGCTGATGCGTTGGCTCAACAGCTCGAAGACGCTATGCAAAAAGATCTTTCAGATGCGACGAGTAATCTAGTTAACTTTGTGAATATTGTTGCCAAGCCTTATCGAGAAGAAGCTCAGCTAAGACTTGATCGTCTTTTAGGAATCCAGAAAGAATTATCAGATATTAGAAGTAAATTACAGTTGCTACAAGTTGATATTGATAACCTTCATGTATCACGAGACGAGATGAGACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009668 GO:0009707 GO:0009791 GO:0009941 GO:0009987 GO:0010027 GO:0010228 GO:0010363 GO:0010941 GO:0016020 GO:0016043 GO:0019867 GO:0022414 GO:0031090 GO:0031347 GO:0031348 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0034051 GO:0042170 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045824 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0060548 GO:0061024 GO:0061458 GO:0065007 GO:0071840 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900424 GO:1900425 GO:1902477 GO:1902478

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N TMP-TENI

Protein Analysis

912

Amino Acids

100.73

Weight (kDa)

5.72

Isoelectric Point (pI)

35.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TMP-TENI	PF02581	95 - 174	3.2e-06	Thiamine monophosphate synthase
MMR_HSR1	PF01926	352 - 485	6.3e-13	50S ribosome-binding GTPase
GTP_EFTU	PF00009	352 - 528	3.4e-10	Elongation factor Tu GTP binding domain
Dynamin_N	PF00350	353 - 401	3.9e-10	Dynamin family
Dynamin_N	PF00350	409 - 485	8.8e-10	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03160 AT1G03160 AT1G03160 AT1G03160
fragaria_vesca	FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600
malus_domestica	MD00G1063200.v1.1 MD11G1286100.v1.1 MD11G1311300.v1.1 MD11G1311400.v1.1 MD11G1311600.v1.1 MD11G1311700.v1.1 MD11G1312200.v1.1
prunus_persica	Prupe.8G241300_v2.0.a1
pyrus_communis	pycom11g25360
rosa_chinensis	RchiOBHm_Chr6g0291071
rosa_laevigata	RLG00000012149
rosa_multiflora	Rmu_co8364727.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176400
rosa_rugosa	Rorug06G0217300
rosa_samantha	Rh6AG327500 Rh6BG335000 Rh6CG341200 Rh6DG328500
rosa_wichuraiana	Rw6G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2631
AatII	GACGTC	1 cut(s)	38
AccBSI	CCGCTC	1 cut(s)	276
AccI	GTMKAC	1 cut(s)	306
AccII	CGCG	2 cut(s)	190, 1871
AclI	AACGTT	1 cut(s)	1201
AclWI	GGATC	6 cut(s)	522, 535, 643, 1043, 1291, 1628
AcoI	YGGCCR	3 cut(s)	76, 1222, 2177
AcsI	RAATTY	5 cut(s)	889, 1070, 1328, 1433, 1679
AcuI	CTGAAG	2 cut(s)	1818, 2216
AcvI	CACGTG	1 cut(s)	1340
AcyI	GRCGYC	2 cut(s)	35, 258
AfaI	GTAC	3 cut(s)	546, 1412, 2003
AfiI	CCNNNNNNNGG	5 cut(s)	74, 541, 985, 2142, 2436
AflII	CTTAAG	2 cut(s)	1256, 1874
AflIII	ACRYGT	2 cut(s)	436, 2004
AjiI	CACGTC	1 cut(s)	113
AjnI	CCWGG	4 cut(s)	73, 202, 1282, 1636
AleI	CACNNNNGTG	1 cut(s)	1420
AloI	GAACNNNNNNTCC	2 cut(s)	184, 216
AlwI	GGATC	6 cut(s)	522, 535, 643, 1043, 1291, 1628
AlwNI	CAGNNNCTG	2 cut(s)	745, 1637
AoxI	GGCC	7 cut(s)	76, 185, 409, 1222, 2025, 2177, 2419
ApeKI	GCWGC	3 cut(s)	1814, 2036, 2351
ApoI	RAATTY	5 cut(s)	889, 1070, 1328, 1433, 1679
ArsI	GACNNNNNNTTYG	2 cut(s)	283, 315
Asp700I	GAANNNNTTC	5 cut(s)	148, 492, 1332, 2162, 2406
AspLEI	GCGC	1 cut(s)	1873
AspS9I	GGNCC	1 cut(s)	1287
AsuC2I	CCSGG	2 cut(s)	237, 1717
AsuHPI	GGTGA	5 cut(s)	11, 30, 653, 2069, 2503
AsuII	TTCGAA	1 cut(s)	2166
AvaII	GGWCC	1 cut(s)	1287
BaeI	ACNNNNGTAYC	2 cut(s)	642, 675
BalI	TGGCCA	2 cut(s)	1224, 2179
BamHI	GGATCC	1 cut(s)	527
BarI	GAAGNNNNNNTAC	2 cut(s)	1224, 1256
BauI	CACGAG	2 cut(s)	1476, 2718
BbrPI	CACGTG	1 cut(s)	1340
BbsI	GAAGAC	4 cut(s)	485, 1830, 2476, 2535
BbvI	GCAGC	3 cut(s)	1801, 2048, 2338
BccI	CCATC	8 cut(s)	341, 517, 821, 991, 1048, 1214, 1714, 1873
BceAI	ACGGC	4 cut(s)	215, 396, 440, 1030
BcgI	CGANNNNNNTGC	2 cut(s)	2077, 2111
BciT130I	CCWGG	4 cut(s)	75, 204, 1284, 1638
BciVI	GTATCC	1 cut(s)	1563
BcnI	CCSGG	2 cut(s)	237, 1717
BfaI	CTAG	7 cut(s)	183, 254, 465, 798, 1811, 1818, 2570
BfmI	CTRYAG	2 cut(s)	2352, 2448
BfrI	CTTAAG	2 cut(s)	1256, 1874
BfuI	GTATCC	1 cut(s)	1563
BglII	AGATCT	2 cut(s)	2404, 2545
BisI	GCNGC	7 cut(s)	57, 188, 381, 987, 1815, 2037, 2352
BlpI	GCTNAGC	2 cut(s)	1764, 2616
BlsI	GCNGC	7 cut(s)	58, 189, 382, 988, 1816, 2038, 2353
Bme1390I	CCNGG	6 cut(s)	75, 204, 237, 1284, 1638, 1717
Bme18I	GGWCC	1 cut(s)	1287
BmgBI	CACGTC	1 cut(s)	113
BmgT120I	GGNCC	1 cut(s)	1287
BmiI	GGNNCC	5 cut(s)	355, 529, 990, 1288, 2284
BmrFI	CCNGG	6 cut(s)	75, 204, 237, 1284, 1638, 1717
BmsI	GCATC	6 cut(s)	68, 1012, 1462, 2375, 2497, 2545
BoxI	GACNNNNGTC	1 cut(s)	489
BpiI	GAAGAC	4 cut(s)	485, 1830, 2476, 2535
BplI	GAGNNNNNCTC	4 cut(s)	992, 1024, 2137, 2169
BpmI	CTGGAG	2 cut(s)	2055, 2454
Bpu1102I	GCTNAGC	2 cut(s)	1764, 2616
Bpu14I	TTCGAA	1 cut(s)	2166
BpuEI	CTTGAG	6 cut(s)	586, 1505, 1598, 1643, 1694, 2293
BpuMI	CCSGG	2 cut(s)	237, 1717
Bsa29I	ATCGAT	1 cut(s)	1038
BsaAI	YACGTR	2 cut(s)	1340, 2005
BsaBI	GATNNNNATC	2 cut(s)	971, 1464
BsaHI	GRCGYC	2 cut(s)	35, 258
BsaJI	CCNNGG	3 cut(s)	609, 1283, 1752
BsaWI	WCCGGW	2 cut(s)	1407, 1555
BsaXI	ACNNNNNCTCC	4 cut(s)	822, 852, 2427, 2457
Bsc4I	CCNNNNNNNGG	5 cut(s)	74, 541, 985, 2142, 2436
Bse118I	RCCGGY	2 cut(s)	21, 78
Bse1I	ACTGG	2 cut(s)	561, 2403
Bse3DI	GCAATG	2 cut(s)	32, 721
Bse8I	GATNNNNATC	2 cut(s)	971, 1464
BseBI	CCWGG	4 cut(s)	75, 204, 1284, 1638
BseCI	ATCGAT	1 cut(s)	1038
BseDI	CCNNGG	3 cut(s)	609, 1283, 1752
BseGI	GGATG	6 cut(s)	583, 808, 975, 1213, 1725, 2042
BseJI	GATNNNNATC	2 cut(s)	971, 1464
BseLI	CCNNNNNNNGG	5 cut(s)	74, 541, 985, 2142, 2436
BseMI	GCAATG	2 cut(s)	32, 721
BseMII	CTCAG	4 cut(s)	1755, 2043, 2394, 2630
BseNI	ACTGG	2 cut(s)	561, 2403
BseRI	GAGGAG	1 cut(s)	96
BseXI	GCAGC	3 cut(s)	1801, 2048, 2338
BsgI	GTGCAG	2 cut(s)	1230, 1362
Bsh1236I	CGCG	2 cut(s)	190, 1871
Bsh1285I	CGRYCG	1 cut(s)	310
BshFI	GGCC	7 cut(s)	78, 187, 411, 1224, 2027, 2179, 2421
BshVI	ATCGAT	1 cut(s)	1038
BsiEI	CGRYCG	1 cut(s)	310
BsiWI	CGTACG	1 cut(s)	2001
BslFI	GGGAC	3 cut(s)	204, 1124, 1300
BslI	CCNNNNNNNGG	5 cut(s)	74, 541, 985, 2142, 2436
BsmBI	CGTCTC	3 cut(s)	956, 1775, 2715
BsmFI	GGGAC	3 cut(s)	204, 1124, 1300
BsnI	GGCC	7 cut(s)	78, 187, 411, 1224, 2027, 2179, 2421
Bsp119I	TTCGAA	1 cut(s)	2166
Bsp1720I	GCTNAGC	2 cut(s)	1764, 2616
Bsp19I	CCATGG	1 cut(s)	1752
BspANI	GGCC	7 cut(s)	78, 187, 411, 1224, 2027, 2179, 2421
BspCNI	CTCAG	4 cut(s)	1756, 2042, 2393, 2629
BspDI	ATCGAT	1 cut(s)	1038
BspFNI	CGCG	2 cut(s)	190, 1871
BspHI	TCATGA	1 cut(s)	850
BspLI	GGNNCC	5 cut(s)	355, 529, 990, 1288, 2284
BspMAI	CTGCAG	1 cut(s)	2356
BspPI	GGATC	6 cut(s)	522, 535, 643, 1043, 1291, 1628
BspQI	GCTCTTC	3 cut(s)	671, 816, 1185
BspT104I	TTCGAA	1 cut(s)	2166
BspTI	CTTAAG	2 cut(s)	1256, 1874
BsrBI	CCGCTC	1 cut(s)	276
BsrDI	GCAATG	2 cut(s)	32, 721
BsrFI	RCCGGY	2 cut(s)	21, 78
BsrI	ACTGG	2 cut(s)	561, 2403
BssAI	RCCGGY	2 cut(s)	21, 78
BssECI	CCNNGG	3 cut(s)	609, 1283, 1752
BssNI	GRCGYC	2 cut(s)	35, 258
BssSI	CACGAG	2 cut(s)	1476, 2718
BssT1I	CCWWGG	1 cut(s)	1752
Bst2BI	CACGAG	2 cut(s)	1476, 2718
Bst2UI	CCWGG	4 cut(s)	75, 204, 1284, 1638
Bst4CI	ACNGT	8 cut(s)	42, 69, 311, 1093, 1569, 2335, 2361, 2682
Bst6I	CTCTTC	5 cut(s)	282, 671, 816, 1109, 1185
BstACI	GRCGYC	2 cut(s)	35, 258
BstAFI	CTTAAG	2 cut(s)	1256, 1874
BstAPI	GCANNNNNTGC	1 cut(s)	1571
BstBAI	YACGTR	2 cut(s)	1340, 2005
BstBI	TTCGAA	1 cut(s)	2166
BstC8I	GCNNGC	2 cut(s)	898, 1911
BstDEI	CTNAG	5 cut(s)	1764, 2029, 2380, 2616, 2621
BstDSI	CCRYGG	1 cut(s)	1752
BstF5I	GGATG	6 cut(s)	583, 808, 975, 1213, 1725, 2042
BstFNI	CGCG	2 cut(s)	190, 1871
BstHHI	GCGC	1 cut(s)	1873
BstMCI	CGRYCG	1 cut(s)	310
BstMWI	GCNNNNNNNGC	6 cut(s)	461, 506, 596, 1571, 1580, 2033
BstNI	CCWGG	4 cut(s)	75, 204, 1284, 1638
BstPAI	GACNNNNGTC	1 cut(s)	489
BstSCI	CCNGG	6 cut(s)	73, 202, 235, 1282, 1636, 1715
BstSFI	CTRYAG	2 cut(s)	2352, 2448
BstUI	CGCG	2 cut(s)	190, 1871
BstV1I	GCAGC	3 cut(s)	1801, 2048, 2338
BstV2I	GAAGAC	4 cut(s)	485, 1830, 2476, 2535
BstX2I	RGATCY	5 cut(s)	527, 635, 1633, 2404, 2545
BstYI	RGATCY	5 cut(s)	527, 635, 1633, 2404, 2545
Bsu15I	ATCGAT	1 cut(s)	1038
BsuI	GTATCC	1 cut(s)	1563
BsuRI	GGCC	7 cut(s)	78, 187, 411, 1224, 2027, 2179, 2421
BsuTUI	ATCGAT	1 cut(s)	1038
BtgI	CCRYGG	1 cut(s)	1752
BtrI	CACGTC	1 cut(s)	113
BtsCI	GGATG	6 cut(s)	583, 808, 975, 1213, 1725, 2042
BtsI	GCAGTG	1 cut(s)	1427
BtsIMutI	CAGTG	5 cut(s)	554, 992, 1427, 2388, 2396
Cac8I	GCNNGC	2 cut(s)	898, 1911
CaiI	CAGNNNCTG	2 cut(s)	745, 1637
CciI	TCATGA	1 cut(s)	850
CfoI	GCGC	1 cut(s)	1873
Cfr10I	RCCGGY	2 cut(s)	21, 78
Cfr13I	GGNCC	1 cut(s)	1287
ClaI	ATCGAT	1 cut(s)	1038
CseI	GACGC	5 cut(s)	206, 266, 1304, 1757, 2540
Csp6I	GTAC	3 cut(s)	545, 1411, 2002
CviAII	CATG	4 cut(s)	155, 851, 1753, 2711
CviQI	GTAC	3 cut(s)	545, 1411, 2002
DdeI	CTNAG	5 cut(s)	1764, 2029, 2380, 2616, 2621
DrdI	GACNNNNNNGTC	1 cut(s)	2631
DseDI	GACNNNNNNGTC	1 cut(s)	2631
EaeI	YGGCCR	3 cut(s)	76, 1222, 2177
Eam1104I	CTCTTC	5 cut(s)	282, 671, 816, 1109, 1185
EarI	CTCTTC	5 cut(s)	282, 671, 816, 1109, 1185
EciI	GGCGGA	5 cut(s)	43, 151, 366, 442, 677
Eco130I	CCWWGG	1 cut(s)	1752
Eco32I	GATATC	2 cut(s)	445, 1462
Eco47I	GGWCC	1 cut(s)	1287
Eco57I	CTGAAG	2 cut(s)	1818, 2216
Eco72I	CACGTG	1 cut(s)	1340
EcoRI	GAATTC	1 cut(s)	889
EcoRII	CCWGG	4 cut(s)	73, 202, 1282, 1636
EcoRV	GATATC	2 cut(s)	445, 1462
EcoT14I	CCWWGG	1 cut(s)	1752
ErhI	CCWWGG	1 cut(s)	1752
Esp3I	CGTCTC	3 cut(s)	956, 1775, 2715
FaeI	CATG	4 cut(s)	158, 854, 1756, 2714
FalI	AAGNNNNNCTT	8 cut(s)	279, 311, 996, 1028, 2082, 2114, 2394, 2426
FaqI	GGGAC	3 cut(s)	204, 1124, 1300
FatI	CATG	4 cut(s)	154, 850, 1752, 2710
FauI	CCCGC	1 cut(s)	269
FauNDI	CATATG	2 cut(s)	2185, 2221
FblI	GTMKAC	1 cut(s)	306
Fnu4HI	GCNGC	7 cut(s)	57, 188, 381, 987, 1815, 2037, 2352
FokI	GGATG	6 cut(s)	590, 815, 962, 1200, 1732, 2029
Fsp4HI	GCNGC	7 cut(s)	57, 188, 381, 987, 1815, 2037, 2352
FspBI	CTAG	7 cut(s)	183, 254, 465, 798, 1811, 1818, 2570
GlaI	GCGC	1 cut(s)	1872
GluI	GCNGC	7 cut(s)	57, 188, 381, 987, 1815, 2037, 2352
GsuI	CTGGAG	2 cut(s)	2055, 2454
HaeIII	GGCC	7 cut(s)	78, 187, 411, 1224, 2027, 2179, 2421
HgaI	GACGC	5 cut(s)	206, 266, 1304, 1757, 2540
HhaI	GCGC	1 cut(s)	1873
Hin1I	GRCGYC	2 cut(s)	35, 258
Hin1II	CATG	4 cut(s)	158, 854, 1756, 2714
Hin6I	GCGC	1 cut(s)	1871
HinP1I	GCGC	1 cut(s)	1871
HincII	GTYRAC	3 cut(s)	307, 1276, 2575
HindII	GTYRAC	3 cut(s)	307, 1276, 2575
HindIII	AAGCTT	1 cut(s)	1586
HpaI	GTTAAC	1 cut(s)	2575
HphI	GGTGA	5 cut(s)	11, 30, 653, 2069, 2503
Hpy166II	GTNNAC	5 cut(s)	242, 307, 1276, 1413, 2575
Hpy8I	GTNNAC	5 cut(s)	242, 307, 1276, 1413, 2575
Hpy99I	CGWCG	4 cut(s)	266, 341, 488, 2563
HpyAV	CCTTC	8 cut(s)	482, 568, 1022, 1124, 1310, 1899, 2135, 2717
HpyCH4III	ACNGT	8 cut(s)	42, 69, 311, 1093, 1569, 2335, 2361, 2682
HpyCH4IV	ACGT	7 cut(s)	35, 112, 436, 1160, 1201, 1339, 2004
HpyCH4V	TGCA	8 cut(s)	708, 739, 1103, 1247, 1343, 2354, 2366, 2539
HpyF10VI	GCNNNNNNNGC	6 cut(s)	461, 506, 596, 1571, 1580, 2033
HpyF3I	CTNAG	5 cut(s)	1764, 2029, 2380, 2616, 2621
HpySE526I	ACGT	7 cut(s)	35, 112, 436, 1160, 1201, 1339, 2004
Hsp92I	GRCGYC	2 cut(s)	35, 258
Hsp92II	CATG	4 cut(s)	158, 854, 1756, 2714
HspAI	GCGC	1 cut(s)	1871
KspAI	GTTAAC	1 cut(s)	2575
LguI	GCTCTTC	3 cut(s)	671, 816, 1185
LmnI	GCTCC	7 cut(s)	353, 611, 830, 994, 2074, 2348, 2432
Lsp1109I	GCAGC	3 cut(s)	1801, 2048, 2338
LweI	GCATC	6 cut(s)	68, 1012, 1462, 2375, 2497, 2545
MaeI	CTAG	7 cut(s)	183, 254, 465, 798, 1811, 1818, 2570
MaeII	ACGT	7 cut(s)	35, 112, 436, 1160, 1201, 1339, 2004
MaeIII	GTNAC	6 cut(s)	31, 36, 209, 700, 741, 2329
MbiI	CCGCTC	1 cut(s)	276
MfeI	CAATTG	1 cut(s)	2204
MflI	RGATCY	5 cut(s)	527, 635, 1633, 2404, 2545
MlsI	TGGCCA	2 cut(s)	1224, 2179
MluNI	TGGCCA	2 cut(s)	1224, 2179
MlyI	GAGTC	5 cut(s)	286, 533, 829, 1662, 2155
MmeI	TCCRAC	2 cut(s)	507, 555
Mox20I	TGGCCA	2 cut(s)	1224, 2179
MroXI	GAANNNNTTC	5 cut(s)	148, 492, 1332, 2162, 2406
MscI	TGGCCA	2 cut(s)	1224, 2179
MseI	TTAA	9 cut(s)	87, 1074, 1257, 1382, 1506, 1530, 1737, 1875, 2574
MslI	CAYNNNNRTG	3 cut(s)	521, 1218, 1420
Msp20I	TGGCCA	2 cut(s)	1224, 2179
MspA1I	CMGCKG	2 cut(s)	362, 2432
MspCI	CTTAAG	2 cut(s)	1256, 1874
MspR9I	CCNGG	6 cut(s)	75, 204, 237, 1284, 1638, 1717
MunI	CAATTG	1 cut(s)	2204
MvaI	CCWGG	4 cut(s)	75, 204, 1284, 1638
MvnI	CGCG	2 cut(s)	190, 1871
MwoI	GCNNNNNNNGC	6 cut(s)	461, 506, 596, 1571, 1580, 2033
NciI	CCSGG	2 cut(s)	237, 1717
NcoI	CCATGG	1 cut(s)	1752
NdeI	CATATG	2 cut(s)	2185, 2221
NlaIII	CATG	4 cut(s)	158, 854, 1756, 2714
NlaIV	GGNNCC	5 cut(s)	355, 529, 990, 1288, 2284
NmuCI	GTSAC	4 cut(s)	31, 36, 700, 2329
NspV	TTCGAA	1 cut(s)	2166
OliI	CACNNNNGTG	1 cut(s)	1420
PagI	TCATGA	1 cut(s)	850
PciSI	GCTCTTC	3 cut(s)	671, 816, 1185
PcsI	WCGNNNNNNNCGW	3 cut(s)	118, 453, 1474
PdmI	GAANNNNTTC	5 cut(s)	148, 492, 1332, 2162, 2406
PfeI	GAWTC	6 cut(s)	158, 280, 584, 665, 1184, 2643
Pfl23II	CGTACG	1 cut(s)	2001
PkrI	GCNGC	7 cut(s)	58, 189, 382, 988, 1816, 2038, 2353
PleI	GAGTC	5 cut(s)	286, 533, 828, 1661, 2154
PmaCI	CACGTG	1 cut(s)	1340
PmlI	CACGTG	1 cut(s)	1340
PpsI	GAGTC	5 cut(s)	286, 533, 828, 1661, 2154
Ppu21I	YACGTR	2 cut(s)	1340, 2005
PshAI	GACNNNNGTC	1 cut(s)	489
Psp1406I	AACGTT	1 cut(s)	1201
Psp6I	CCWGG	4 cut(s)	73, 202, 1282, 1636
PspCI	CACGTG	1 cut(s)	1340
PspGI	CCWGG	4 cut(s)	73, 202, 1282, 1636
PspLI	CGTACG	1 cut(s)	2001
PspN4I	GGNNCC	5 cut(s)	355, 529, 990, 1288, 2284
PspPI	GGNCC	1 cut(s)	1287
PstI	CTGCAG	1 cut(s)	2356
PstNI	CAGNNNCTG	2 cut(s)	745, 1637
PsuI	RGATCY	5 cut(s)	527, 635, 1633, 2404, 2545
RsaI	GTAC	3 cut(s)	546, 1412, 2003
RsaNI	GTAC	3 cut(s)	545, 1411, 2002
RseI	CAYNNNNRTG	3 cut(s)	521, 1218, 1420
SalI	GTCGAC	1 cut(s)	305
SapI	GCTCTTC	3 cut(s)	671, 816, 1185
SaqAI	TTAA	9 cut(s)	87, 1074, 1257, 1382, 1506, 1530, 1737, 1875, 2574
SatI	GCNGC	7 cut(s)	57, 188, 381, 987, 1815, 2037, 2352
Sau96I	GGNCC	1 cut(s)	1287
SchI	GAGTC	5 cut(s)	286, 533, 829, 1662, 2155
ScrFI	CCNGG	6 cut(s)	75, 204, 237, 1284, 1638, 1717
SfaNI	GCATC	6 cut(s)	68, 1012, 1462, 2375, 2497, 2545
SfcI	CTRYAG	2 cut(s)	2352, 2448
SfuI	TTCGAA	1 cut(s)	2166
SinI	GGWCC	1 cut(s)	1287
SmiMI	CAYNNNNRTG	3 cut(s)	521, 1218, 1420
SmlI	CTYRAG	8 cut(s)	601, 1256, 1484, 1577, 1622, 1673, 1874, 2272
SmoI	CTYRAG	8 cut(s)	601, 1256, 1484, 1577, 1622, 1673, 1874, 2272
SspI	AATATT	2 cut(s)	1270, 2587
SspMI	CTAG	7 cut(s)	183, 254, 465, 798, 1811, 1818, 2570
StyD4I	CCNGG	6 cut(s)	73, 202, 235, 1282, 1636, 1715
StyI	CCWWGG	1 cut(s)	1752
TaaI	ACNGT	8 cut(s)	42, 69, 311, 1093, 1569, 2335, 2361, 2682
TaiI	ACGT	7 cut(s)	38, 115, 439, 1163, 1204, 1342, 2007
TaqI	TCGA	9 cut(s)	137, 306, 1038, 1855, 2166, 2314, 2467, 2526, 2605
TauI	GCSGC	4 cut(s)	59, 190, 383, 989
TfiI	GAWTC	6 cut(s)	158, 280, 584, 665, 1184, 2643
Tru1I	TTAA	9 cut(s)	87, 1074, 1257, 1382, 1506, 1530, 1737, 1875, 2574
Tru9I	TTAA	9 cut(s)	87, 1074, 1257, 1382, 1506, 1530, 1737, 1875, 2574
TscAI	CASTG	5 cut(s)	561, 999, 1427, 2388, 2403
TseFI	GTSAC	4 cut(s)	31, 36, 700, 2329
TseI	GCWGC	3 cut(s)	1814, 2036, 2351
Tsp45I	GTSAC	4 cut(s)	31, 36, 700, 2329
TspDTI	ATGAA	9 cut(s)	171, 732, 881, 885, 892, 1167, 1488, 1683, 2699
TspGWI	ACGGA	1 cut(s)	1534
TspRI	CASTG	5 cut(s)	561, 999, 1427, 2388, 2403
Vha464I	CTTAAG	2 cut(s)	1256, 1874
VpaK11BI	GGWCC	1 cut(s)	1287
XapI	RAATTY	5 cut(s)	889, 1070, 1328, 1433, 1679
XcmI	CCANNNNNNNNNTGG	1 cut(s)	824
XmiI	GTMKAC	1 cut(s)	306
XmnI	GAANNNNTTC	5 cut(s)	148, 492, 1332, 2162, 2406
XspI	CTAG	7 cut(s)	183, 254, 465, 798, 1811, 1818, 2570
ZraI	GACGTC	1 cut(s)	36

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.