Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0005859

Physical Location & Seq

Genomic Coordinates Reverse (-)

15880229 .. 15888271

Gene Structure 8043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00176400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2640 bp

ATGGTACCCCTCATTTCCTTCCACACCTCCACAACACACCCTCTCCTACTAACCCCATTCCTCCACCTCCACCTCCCCCGCCCCAAATCCCACCTCCCCCGACGAACCCACTTCCCCATTTGCTCAATCTCCCAGAACCCAAATCAATTCACCCGCCAAAACCCACAACCCCACCCCCAGCCCCCAAGAACCCAGTTCCCCGGTGGCTTCAGGCGCCCAGAAATCAAGGTCCCCAACATCGTCCTCCAATTGGACCCTGAAGACGTCTTGGCTTCCGACGACGTGTTGGGTTTGGTCGATAAAGCTGTCTCCAAATGGGTTGGGATTCTTGTCCTCGACGGCCGTGAAGCTAACGGCGGCCGCCTCTATGAGGCCGCCTGTAAGTTGAAGTCGGTGGTCGGAGACCGGGCTTACTTGTTGATCTCTGAGCGCGTGGATATCGCGGCCGCAGCTAATGCGAGTGGGATTCTGCTCTCCGATCAAGGTCTTCCGACCATTGTAGCAAGAAGCACAATGATGGCTTCAAAATCTGATTCGGTATTGCTTCCTTTGGTGGCTAGGAATGTGCAGGATGCAGATGCTGCTGTAAAAGCCTCCAGCTCTGAAGGAGCTGATTTTCTTATATATAGTGTTGATGGAGAGGAAAATGTTCCTGCTGTATTGAACTCTCTGTTTAAAAATGTGAAGATACCAATATTTGTCACGATCAGTTCATACAGCGGGTTATATACAGAGTTGCCAGGACTACTCAGATCTGGGGCTAGTGGATTAGTTACATCTTTGAAGGATTTCAGGATGCTTGATGACGATGCGTTGAGCAAGTTGTTTGATATAGTGTACATGGCGAATAGTAAAAGACACGATGAAGTTGAAAGCTTCAGTAAGACCAAATTTTCGGGTGTGCGTAGTGGTGCCAAGGACACTAAAACTGTTGCTGGGTTTCTTAAACTGGAGGATAGAGAAAAGCAGTTCATCGAAACAGAGAGATCAGTGTTGCTCAAAGCAATAAGTGTTATCCAGAGAGCTGCCCCACTGATGGAGGAGGTTTCACTTCTCATTGATGCAGTTTCTCAAATTGATGAGCCATTTTTACTGGTTATAGTGGGCGAATTTAACTCTGGTAAATCAACTGTTATTAATGCACTTCTTGGAAGAAGATATCTTAAAGAGGGGTTGTTCCCACAACTAATGAGATCACCTTCTTACGCTATTCTGAGATGGATGGTGAGGAACAACATTGTGAAAGGCATCCAGATGATGAACGTTGTTGATACACCTGGAACTAATGTGATTTTGCAAAGGCAACAACGCCTTACCGAGGAATTTGTACCCCGTGCTGATTTGCTTCTGTTTGTTATCTCTGCCGATCGCCCTTTAACTGAAAGCGAGGTTGCTTTCCTTCGGTACACTCAGCAGTGGAAGAAGAAAGTAGTGTTTGTCTTGAACAAATCTGATATCTATCGGAATGCTTGTGAGCTTGAGGAAGGTATGTCATTCATCAAGGAGAATACGCAGAAATTGCTGAATACTGAACATGTGACATTATTTCCCATCTCTGCACGAACTGCTCTTGAGGCAAAACTGTCATCTTCTGCTTTTGGGGAAGATTACGCAAAACTGTCGGTATCTGATTCTCGGTGGAAAAGCAATAACTTCTATGAGCTTGAGAACTTCTTGTATAGTTTTTTAGATGGGTCAACAAGTACAGGAATGGAACGAATGAAACTCAAACTAGAAACACCCATTGCAATTGCAGAGAACCTACTTTCTGCTTGTGAAACTCTTGTCACACAAGACTGCCGATATGCCAAGCAGGACTTGGCCTCAATAAATGATATAGTTGGCAGCGTAAAGAACTATGCAGTGAAGATGGAAAATGAGAGCATTGCTTGGAGAAGAAGAATCCTATCTGTGATTGATACTACAAAGTCACGTGTTGTGGAGCTCATAGAAGCTACTCTGCTTATATCAAATCTTGATCTTGTTGCTTTCTATGTTTTCAAAGGGGGAAAATCTGCTACCATTCCAGCCACCTCAAGGGTTCAGAATGACATTATAGGACCTGCACTTTCAGATGTGCAAAAACTCCTTGGAGAATACGTGATATGGCTGCAATCGGACAATGTTCAGGAAGGAAGAATGTACTCAAACACATTTGGAAAGCGTTTGCCTTCATTCGTATATCCACAGAGTCAGGTGGATTTGGAGATATTTGAATCTCTGGAAAAAGTAAATAAACACAGCTTGAAAGTGATAGAGGACTTCAGTGCCAATGCTGCTTCCAAATTGTTTGAGCAAGAAATACGTGAAGCGTTTCTTGGGACATTTGGTGGGCTAGGAGCAGCTGGTTTATCTGCTTCACTTTTGACAACTGTGCTGCCGACCACTTTGGAAGATCTTCTTGCTCTTGGTCTTTGCTCAGCTGGCGGGTTTATAGCTATATCAAAATTGCCAGCTCGTAGGCAAGAGATGATAGAAAAGGTAAAAAGGACTGCGGATGGTTTGGCACGTGAGGTTGAACAGTCCATGCAGAACGATCTTTCAGAAACCATTGAGAACATGGAAAGGAATGCAGGAGAAGGGAAACCCGACAAACTCTTTTCCGGGAGGATGGCGGCTGGTCGGCTGGAAAGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009668 GO:0009707 GO:0009791 GO:0009941 GO:0009987 GO:0010027 GO:0010228 GO:0010363 GO:0010941 GO:0016020 GO:0016043 GO:0019867 GO:0022414 GO:0031090 GO:0031347 GO:0031348 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0034051 GO:0042170 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045824 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0060548 GO:0061024 GO:0061458 GO:0065007 GO:0071840 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900424 GO:1900425 GO:1902477 GO:1902478

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N TMP-TENI

Protein Analysis

879

Amino Acids

97.46

Weight (kDa)

6.46

Isoelectric Point (pI)

43.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	366 - 483	8.6e-14	50S ribosome-binding GTPase
Dynamin_N	PF00350	420 - 483	4.9e-08	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03160 AT1G03160 AT1G03160 AT1G03160
fragaria_vesca	FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600
malus_domestica	MD00G1063200.v1.1 MD11G1286100.v1.1 MD11G1311300.v1.1 MD11G1311400.v1.1 MD11G1311600.v1.1 MD11G1311700.v1.1 MD11G1312200.v1.1
prunus_persica	Prupe.8G241300_v2.0.a1
pyrus_communis	pycom11g25360
rosa_chinensis	RchiOBHm_Chr6g0291071
rosa_laevigata	RLG00000012149
rosa_multiflora	Rmu_co8364727.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176400
rosa_rugosa	Rorug06G0217300
rosa_samantha	Rh6AG327500 Rh6BG335000 Rh6CG341200 Rh6DG328500
rosa_wichuraiana	Rw6G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	267
Acc36I	ACCTGC	1 cut(s)	2071
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	3 cut(s)	4, 213, 911
AccII	CGCG	2 cut(s)	432, 443
AclI	AACGTT	1 cut(s)	1263
AcoI	YGGCCR	3 cut(s)	340, 358, 444
AcsI	RAATTY	3 cut(s)	890, 1109, 1322
AcuI	CTGAAG	5 cut(s)	193, 279, 624, 862, 2248
AcvI	CACGTG	2 cut(s)	1934, 2510
AcyI	GRCGYC	2 cut(s)	214, 264
AfaI	GTAC	6 cut(s)	6, 839, 1329, 1406, 1705, 2144
AfiI	CCNNNNNNNGG	5 cut(s)	250, 370, 1036, 1318, 2037
AflIII	ACRYGT	3 cut(s)	282, 1534, 1933
AjiI	CACGTC	1 cut(s)	283
AjnI	CCWGG	2 cut(s)	739, 1276
AjuI	GAANNNNNNNTTGG	2 cut(s)	2301, 2333
Alw21I	GWGCWC	1 cut(s)	1947
Alw26I	GTCTC	2 cut(s)	313, 396
AlwNI	CAGNNNCTG	1 cut(s)	581
AoxI	GGCC	5 cut(s)	340, 358, 372, 444, 1821
ApeKI	GCWGC	8 cut(s)	449, 581, 1025, 1845, 2110, 2276, 2342, 2377
ApoI	RAATTY	3 cut(s)	890, 1109, 1322
ArsI	GACNNNNNNTTYG	2 cut(s)	877, 909
AseI	ATTAAT	1 cut(s)	1137
Asp700I	GAANNNNTTC	4 cut(s)	648, 788, 2313, 2397
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	2 cut(s)	216, 432
AspS9I	GGNCC	3 cut(s)	229, 253, 2060
AsuC2I	CCSGG	3 cut(s)	201, 407, 2605
AsuHPI	GGTGA	3 cut(s)	142, 1188, 1237
AvaII	GGWCC	3 cut(s)	229, 253, 2060
BanI	GGYRCC	3 cut(s)	4, 213, 911
BanII	GRGCYC	1 cut(s)	1947
BbrPI	CACGTG	2 cut(s)	1934, 2510
BbsI	GAAGAC	2 cut(s)	267, 479
Bbv12I	GWGCWC	1 cut(s)	1947
BbvI	GCAGC	8 cut(s)	461, 568, 1012, 1857, 2097, 2263, 2354, 2364
BceAI	ACGGC	3 cut(s)	327, 355, 370
BcgI	CGANNNNNNTGC	2 cut(s)	1602, 1636
BciT130I	CCWGG	2 cut(s)	741, 1278
BcnI	CCSGG	3 cut(s)	201, 407, 2605
BcoDI	GTCTC	2 cut(s)	313, 396
BfaI	CTAG	4 cut(s)	558, 762, 1733, 2336
BfoI	RGCGCY	1 cut(s)	217
BfuAI	ACCTGC	1 cut(s)	2071
BglII	AGATCT	2 cut(s)	752, 2395
BlpI	GCTNAGC	1 cut(s)	2419
Bme1390I	CCNGG	5 cut(s)	201, 407, 741, 1278, 2605
Bme18I	GGWCC	3 cut(s)	229, 253, 2060
BmgBI	CACGTC	1 cut(s)	283
BmgT120I	GGNCC	3 cut(s)	229, 253, 2060
BmiI	GGNNCC	5 cut(s)	6, 215, 231, 255, 913
BmrFI	CCNGG	5 cut(s)	201, 407, 741, 1278, 2605
BmrI	ACTGGG	1 cut(s)	187
BmsI	GCATC	6 cut(s)	562, 568, 786, 799, 1051, 1257
BmuI	ACTGGG	1 cut(s)	187
BpiI	GAAGAC	2 cut(s)	267, 479
BpmI	CTGGAG	2 cut(s)	580, 971
Bpu1102I	GCTNAGC	1 cut(s)	2419
BpuEI	CTTGAG	4 cut(s)	1499, 1592, 1685, 2020
BpuMI	CCSGG	3 cut(s)	201, 407, 2605
BsaAI	YACGTR	4 cut(s)	1934, 2101, 2306, 2510
BsaBI	GATNNNNATC	1 cut(s)	1458
BsaHI	GRCGYC	2 cut(s)	214, 264
BsaI	GGTCTC	1 cut(s)	396
BsaJI	CCNNGG	4 cut(s)	199, 915, 1317, 2089
BsaXI	ACNNNNNCTCC	4 cut(s)	27, 57, 2085, 2115
Bsc4I	CCNNNNNNNGG	5 cut(s)	250, 370, 1036, 1318, 2037
Bse1I	ACTGG	3 cut(s)	193, 954, 1098
Bse3DI	GCAATG	2 cut(s)	1743, 1884
Bse8I	GATNNNNATC	1 cut(s)	1458
BseBI	CCWGG	2 cut(s)	741, 1278
BseDI	CCNNGG	4 cut(s)	199, 915, 1317, 2089
BseGI	GGATG	6 cut(s)	577, 801, 1227, 1248, 2503, 2616
BseJI	GATNNNNATC	1 cut(s)	1458
BseLI	CCNNNNNNNGG	5 cut(s)	250, 370, 1036, 1318, 2037
BseMI	GCAATG	2 cut(s)	1743, 1884
BseMII	CTCAG	5 cut(s)	417, 763, 1205, 1424, 2433
BseNI	ACTGG	3 cut(s)	193, 954, 1098
BseRI	GAGGAG	1 cut(s)	1055
BseX3I	CGGCCG	3 cut(s)	340, 358, 444
BseXI	GCAGC	8 cut(s)	461, 568, 1012, 1857, 2097, 2263, 2354, 2364
BseYI	CCCAGC	2 cut(s)	177, 935
BsgI	GTGCAG	3 cut(s)	587, 1542, 2049
Bsh1236I	CGCG	2 cut(s)	432, 443
Bsh1285I	CGRYCG	4 cut(s)	343, 361, 447, 1369
BshFI	GGCC	5 cut(s)	342, 360, 374, 446, 1823
BshNI	GGYRCC	3 cut(s)	4, 213, 911
BsiEI	CGRYCG	4 cut(s)	343, 361, 447, 1369
BsiHKAI	GWGCWC	1 cut(s)	1947
BsiSI	CCGG	3 cut(s)	201, 406, 2604
BslFI	GGGAC	2 cut(s)	215, 2335
BslI	CCNNNNNNNGG	5 cut(s)	250, 370, 1036, 1318, 2037
BsmAI	GTCTC	2 cut(s)	313, 396
BsmFI	GGGAC	2 cut(s)	215, 2335
BsmI	GAATGC	2 cut(s)	1471, 2575
BsnI	GGCC	5 cut(s)	342, 360, 374, 446, 1823
Bso31I	GGTCTC	1 cut(s)	396
Bsp1286I	GDGCHC	1 cut(s)	1947
Bsp1407I	TGTACA	1 cut(s)	837
Bsp1720I	GCTNAGC	1 cut(s)	2419
BspANI	GGCC	5 cut(s)	342, 360, 374, 446, 1823
BspCNI	CTCAG	5 cut(s)	418, 762, 1206, 1423, 2432
BspFNI	CGCG	2 cut(s)	432, 443
BspLI	GGNNCC	5 cut(s)	6, 215, 231, 255, 913
BspMI	ACCTGC	1 cut(s)	2071
BspT107I	GGYRCC	3 cut(s)	4, 213, 911
BspTNI	GGTCTC	1 cut(s)	396
BsrDI	GCAATG	2 cut(s)	1743, 1884
BsrGI	TGTACA	1 cut(s)	837
BsrI	ACTGG	3 cut(s)	193, 954, 1098
BssECI	CCNNGG	4 cut(s)	199, 915, 1317, 2089
BssNI	GRCGYC	2 cut(s)	214, 264
BssT1I	CCWWGG	2 cut(s)	915, 2089
Bst2UI	CCWGG	2 cut(s)	741, 1278
Bst4CI	ACNGT	6 cut(s)	931, 1132, 1584, 1620, 2374, 2523
BstACI	GRCGYC	2 cut(s)	214, 264
BstAPI	GCANNNNNTGC	4 cut(s)	455, 581, 1519, 1565
BstAUI	TGTACA	1 cut(s)	837
BstBAI	YACGTR	4 cut(s)	1934, 2101, 2306, 2510
BstC8I	GCNNGC	2 cut(s)	2425, 2454
BstDEI	CTNAG	5 cut(s)	426, 749, 1214, 1410, 2419
BstENI	CCTNNNNNAGG	2 cut(s)	368, 1316
BstF5I	GGATG	6 cut(s)	577, 801, 1227, 1248, 2503, 2616
BstFNI	CGCG	2 cut(s)	432, 443
BstH2I	RGCGCY	1 cut(s)	217
BstHHI	GCGC	2 cut(s)	216, 432
BstMAI	GTCTC	2 cut(s)	313, 396
BstMCI	CGRYCG	4 cut(s)	343, 361, 447, 1369
BstNI	CCWGG	2 cut(s)	741, 1278
BstNSI	RCATGY	1 cut(s)	1538
BstSCI	CCNGG	5 cut(s)	199, 405, 739, 1276, 2603
BstUI	CGCG	2 cut(s)	432, 443
BstV1I	GCAGC	8 cut(s)	461, 568, 1012, 1857, 2097, 2263, 2354, 2364
BstV2I	GAAGAC	2 cut(s)	267, 479
BstX2I	RGATCY	2 cut(s)	752, 2395
BstYI	RGATCY	2 cut(s)	752, 2395
BstZI	CGGCCG	3 cut(s)	340, 358, 444
BsuRI	GGCC	5 cut(s)	342, 360, 374, 446, 1823
BtrI	CACGTC	1 cut(s)	283
BtsCI	GGATG	6 cut(s)	577, 801, 1227, 1248, 2503, 2616
BtsI	GCAGTG	2 cut(s)	1421, 1869
BtsIMutI	CAGTG	5 cut(s)	996, 1031, 1421, 1869, 2272
BveI	ACCTGC	1 cut(s)	2071
Cac8I	GCNNGC	2 cut(s)	2425, 2454
CaiI	CAGNNNCTG	1 cut(s)	581
CciNI	GCGGCCGC	2 cut(s)	358, 444
CfoI	GCGC	2 cut(s)	216, 432
Cfr13I	GGNCC	3 cut(s)	229, 253, 2060
Csp6I	GTAC	6 cut(s)	5, 838, 1328, 1405, 1704, 2143
CviAII	CATG	4 cut(s)	841, 1535, 2527, 2560
CviQI	GTAC	6 cut(s)	5, 838, 1328, 1405, 1704, 2143
DdeI	CTNAG	5 cut(s)	426, 749, 1214, 1410, 2419
DinI	GGCGCC	1 cut(s)	215
DraI	TTTAAA	1 cut(s)	676
EaeI	YGGCCR	3 cut(s)	340, 358, 444
EagI	CGGCCG	3 cut(s)	340, 358, 444
Ecl136II	GAGCTC	1 cut(s)	1945
EclXI	CGGCCG	3 cut(s)	340, 358, 444
Eco130I	CCWWGG	2 cut(s)	915, 2089
Eco24I	GRGCYC	1 cut(s)	1947
Eco31I	GGTCTC	1 cut(s)	396
Eco32I	GATATC	3 cut(s)	439, 1160, 1456
Eco47I	GGWCC	3 cut(s)	229, 253, 2060
Eco52I	CGGCCG	3 cut(s)	340, 358, 444
Eco53kI	GAGCTC	1 cut(s)	1945
Eco57I	CTGAAG	5 cut(s)	193, 279, 624, 862, 2248
Eco72I	CACGTG	2 cut(s)	1934, 2510
EcoICRI	GAGCTC	1 cut(s)	1945
EcoNI	CCTNNNNNAGG	2 cut(s)	368, 1316
EcoO109I	RGGNCCY	2 cut(s)	229, 2060
EcoRII	CCWGG	2 cut(s)	739, 1276
EcoRV	GATATC	3 cut(s)	439, 1160, 1456
EcoT14I	CCWWGG	2 cut(s)	915, 2089
EcoT38I	GRGCYC	1 cut(s)	1947
EgeI	GGCGCC	1 cut(s)	215
EheI	GGCGCC	1 cut(s)	215
ErhI	CCWWGG	2 cut(s)	915, 2089
FaeI	CATG	4 cut(s)	844, 1538, 2530, 2563
FalI	AAGNNNNNCTT	6 cut(s)	1802, 1834, 2301, 2333, 2385, 2417
FaqI	GGGAC	2 cut(s)	215, 2335
FatI	CATG	4 cut(s)	840, 1534, 2526, 2559
FauI	CCCGC	4 cut(s)	86, 161, 713, 2420
FokI	GGATG	6 cut(s)	584, 808, 1234, 1235, 2510, 2623
FriOI	GRGCYC	1 cut(s)	1947
FspBI	CTAG	4 cut(s)	558, 762, 1733, 2336
GlaI	GCGC	2 cut(s)	215, 431
GsaI	CCCAGC	2 cut(s)	181, 939
GsuI	CTGGAG	2 cut(s)	580, 971
HaeII	RGCGCY	1 cut(s)	217
HaeIII	GGCC	5 cut(s)	342, 360, 374, 446, 1823
HapII	CCGG	3 cut(s)	201, 406, 2604
HhaI	GCGC	2 cut(s)	216, 432
Hin1I	GRCGYC	2 cut(s)	214, 264
Hin1II	CATG	4 cut(s)	844, 1538, 2530, 2563
Hin6I	GCGC	2 cut(s)	214, 430
HinP1I	GCGC	2 cut(s)	214, 430
HincII	GTYRAC	1 cut(s)	1698
HindII	GTYRAC	1 cut(s)	1698
HindIII	AAGCTT	1 cut(s)	874
HinfI	GANTC	7 cut(s)	325, 466, 533, 1631, 1902, 2191, 2216
HpaII	CCGG	3 cut(s)	201, 406, 2604
HphI	GGTGA	3 cut(s)	142, 1188, 1237
Hpy166II	GTNNAC	3 cut(s)	838, 1407, 1698
Hpy188III	TCNNGA	9 cut(s)	703, 793, 1018, 1252, 1441, 1571, 1976, 2129, 2222
Hpy8I	GTNNAC	3 cut(s)	838, 1407, 1698
Hpy99I	CGWCG	4 cut(s)	105, 281, 284, 341
HpyAV	CCTTC	9 cut(s)	28, 599, 778, 1209, 1409, 1478, 2126, 2181, 2573
HpyCH4III	ACNGT	6 cut(s)	931, 1132, 1584, 1620, 2374, 2523
HpyCH4IV	ACGT	7 cut(s)	264, 282, 1263, 1933, 2100, 2305, 2509
HpyF3I	CTNAG	5 cut(s)	426, 749, 1214, 1410, 2419
HpySE526I	ACGT	7 cut(s)	264, 282, 1263, 1933, 2100, 2305, 2509
Hsp92I	GRCGYC	2 cut(s)	214, 264
Hsp92II	CATG	4 cut(s)	844, 1538, 2530, 2563
HspAI	GCGC	2 cut(s)	214, 430
KasI	GGCGCC	1 cut(s)	213
KpnI	GGTACC	1 cut(s)	8
LmnI	GCTCC	3 cut(s)	608, 1942, 2339
Lsp1109I	GCAGC	8 cut(s)	461, 568, 1012, 1857, 2097, 2263, 2354, 2364
LweI	GCATC	6 cut(s)	562, 568, 786, 799, 1051, 1257
MaeI	CTAG	4 cut(s)	558, 762, 1733, 2336
MaeII	ACGT	7 cut(s)	264, 282, 1263, 1933, 2100, 2305, 2509
MaeIII	GTNAC	5 cut(s)	700, 772, 1537, 1786, 1929
MfeI	CAATTG	2 cut(s)	248, 1749
MflI	RGATCY	2 cut(s)	752, 2395
MhlI	GDGCHC	1 cut(s)	1947
Mly113I	GGCGCC	1 cut(s)	214
MlyI	GAGTC	1 cut(s)	2200
MmeI	TCCRAC	3 cut(s)	300, 379, 515
MroXI	GAANNNNTTC	4 cut(s)	648, 788, 2313, 2397
MseI	TTAA	6 cut(s)	675, 945, 1113, 1137, 1164, 1376
MslI	CAYNNNNRTG	2 cut(s)	515, 1253
MspA1I	CMGCKG	3 cut(s)	720, 2345, 2423
MspI	CCGG	3 cut(s)	201, 406, 2604
MspR9I	CCNGG	5 cut(s)	201, 407, 741, 1278, 2605
MunI	CAATTG	2 cut(s)	248, 1749
Mva1269I	GAATGC	2 cut(s)	1471, 2575
MvaI	CCWGG	2 cut(s)	741, 1278
MvnI	CGCG	2 cut(s)	432, 443
NarI	GGCGCC	1 cut(s)	214
NciI	CCSGG	3 cut(s)	201, 407, 2605
NlaIII	CATG	4 cut(s)	844, 1538, 2530, 2563
NlaIV	GGNNCC	5 cut(s)	6, 215, 231, 255, 913
NmuCI	GTSAC	4 cut(s)	700, 1537, 1786, 1929
NotI	GCGGCCGC	2 cut(s)	358, 444
NspI	RCATGY	1 cut(s)	1538
PciI	ACATGT	1 cut(s)	1534
PctI	GAATGC	2 cut(s)	1471, 2575
PdmI	GAANNNNTTC	4 cut(s)	648, 788, 2313, 2397
PfeI	GAWTC	6 cut(s)	325, 466, 533, 1631, 1902, 2216
PfoI	TCCNGGA	1 cut(s)	2603
Ple19I	CGATCG	1 cut(s)	1369
PleI	GAGTC	1 cut(s)	2199
PluTI	GGCGCC	1 cut(s)	217
PmaCI	CACGTG	2 cut(s)	1934, 2510
PmlI	CACGTG	2 cut(s)	1934, 2510
PpsI	GAGTC	1 cut(s)	2199
Ppu21I	YACGTR	4 cut(s)	1934, 2101, 2306, 2510
PpuMI	RGGWCCY	2 cut(s)	229, 2060
PscI	ACATGT	1 cut(s)	1534
PshBI	ATTAAT	1 cut(s)	1137
Psp124BI	GAGCTC	1 cut(s)	1947
Psp1406I	AACGTT	1 cut(s)	1263
Psp5II	RGGWCCY	2 cut(s)	229, 2060
Psp6I	CCWGG	2 cut(s)	739, 1276
PspCI	CACGTG	2 cut(s)	1934, 2510
PspFI	CCCAGC	2 cut(s)	177, 935
PspGI	CCWGG	2 cut(s)	739, 1276
PspN4I	GGNNCC	5 cut(s)	6, 215, 231, 255, 913
PspPI	GGNCC	3 cut(s)	229, 253, 2060
PspPPI	RGGWCCY	2 cut(s)	229, 2060
PstNI	CAGNNNCTG	1 cut(s)	581
PsuI	RGATCY	2 cut(s)	752, 2395
PvuI	CGATCG	1 cut(s)	1369
PvuII	CAGCTG	2 cut(s)	2345, 2423
RsaI	GTAC	6 cut(s)	6, 839, 1329, 1406, 1705, 2144
RsaNI	GTAC	6 cut(s)	5, 838, 1328, 1405, 1704, 2143
RseI	CAYNNNNRTG	2 cut(s)	515, 1253
SacI	GAGCTC	1 cut(s)	1947
SaqAI	TTAA	6 cut(s)	675, 945, 1113, 1137, 1164, 1376
Sau96I	GGNCC	3 cut(s)	229, 253, 2060
SchI	GAGTC	1 cut(s)	2200
ScrFI	CCNGG	5 cut(s)	201, 407, 741, 1278, 2605
SduI	GDGCHC	1 cut(s)	1947
SfaNI	GCATC	6 cut(s)	562, 568, 786, 799, 1051, 1257
SfoI	GGCGCC	1 cut(s)	215
SinI	GGWCC	3 cut(s)	229, 253, 2060
SmiMI	CAYNNNNRTG	2 cut(s)	515, 1253
SmlI	CTYRAG	4 cut(s)	1478, 1571, 1664, 2035
SmoI	CTYRAG	4 cut(s)	1478, 1571, 1664, 2035
SspDI	GGCGCC	1 cut(s)	213
SspI	AATATT	1 cut(s)	696
SspMI	CTAG	4 cut(s)	558, 762, 1733, 2336
SstI	GAGCTC	1 cut(s)	1947
StyD4I	CCNGG	5 cut(s)	199, 405, 739, 1276, 2603
StyI	CCWWGG	2 cut(s)	915, 2089
TaaI	ACNGT	6 cut(s)	931, 1132, 1584, 1620, 2374, 2523
TaiI	ACGT	7 cut(s)	267, 285, 1266, 1936, 2103, 2308, 2512
TaqI	TCGA	3 cut(s)	297, 336, 975
TatI	WGTACW	3 cut(s)	837, 1703, 2142
TauI	GCSGC	6 cut(s)	360, 363, 377, 446, 449, 2618
TfiI	GAWTC	6 cut(s)	325, 466, 533, 1631, 1902, 2216
Tru1I	TTAA	6 cut(s)	675, 945, 1113, 1137, 1164, 1376
Tru9I	TTAA	6 cut(s)	675, 945, 1113, 1137, 1164, 1376
TscAI	CASTG	5 cut(s)	996, 1038, 1421, 1869, 2272
TseFI	GTSAC	4 cut(s)	700, 1537, 1786, 1929
TseI	GCWGC	8 cut(s)	449, 581, 1025, 1845, 2110, 2276, 2342, 2377
Tsp45I	GTSAC	4 cut(s)	700, 1537, 1786, 1929
TspDTI	ATGAA	7 cut(s)	702, 879, 961, 1274, 1486, 1736, 2163
TspRI	CASTG	5 cut(s)	996, 1038, 1421, 1869, 2272
VpaK11BI	GGWCC	3 cut(s)	229, 253, 2060
VspI	ATTAAT	1 cut(s)	1137
XagI	CCTNNNNNAGG	2 cut(s)	368, 1316
XapI	RAATTY	3 cut(s)	890, 1109, 1322
XceI	RCATGY	1 cut(s)	1538
XcmI	CCANNNNNNNNNTGG	3 cut(s)	200, 1816, 2557
XmnI	GAANNNNTTC	4 cut(s)	648, 788, 2313, 2397
XspI	CTAG	4 cut(s)	558, 762, 1733, 2336
ZraI	GACGTC	1 cut(s)	265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.