Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0005859

Physical Location & Seq

Genomic Coordinates Reverse (-)

15750515 .. 15756077

Gene Structure 5563 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012149

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGGTACCCCTCATTTCATTCCACGCCTCCACAGCACACCCTCTCCTACTAATCCCAACCTCAACCCCATTCCCCCACCTCCACCTCCCCCGCCCCAAATCCCACCTCCCCCGACGAACCCACTTCCCCATTTCCTCAATCTCCCAGAACCCAAATCAATTCACCCGCCAAAACTCACAACCCCAACCCCCAAGAACCCAGTTCCCCGGTGGCTTCAGGCGCCCAGAAATCAAGGTCCCCAACATCGTCCTCCAATTGGACCCTGAAGACGTCTTGGCTTCCGACGACGTGTTGGGTTTGGTCGATAAAGCTGTGTCCAAATGGGTTGGTATTCTTGTCCTCGATGGCCGTGAAGCTAACGGCGGCCGCCTCTATGAGGCCGCCTGTAAGTTGAAGTCGGTGGTCGGAGACCGGGCTTACTTGTTGATCTCTGAGCGCGTGGATATCGCAGCCGCAGCTAATGCGAGTGGGATTCTGCTCTCCGATCAAGGTCTTCCGACCATTGTAGCAAGAAGCACAATGATGGCTTCAAAATCTGATTCGGTAGTGCTTCCTTTGGTGGCTAGGAATGTGCAGGATGCAGATGCTGCCGCAAAAGCCTCCAGCTCCGAAGGAGCTGATTTTCTTATATATAGTGTTGATGGAGAGGAAAATGTTCCTGCTGTATTGAACTCTCTGTTTAAAAATGTGAAGATACCGATATTTGTCACGATCAGTTCATACAGCAGGTTATATACTGAGGTGCCACTACTACTCAGATCTGGGGCTAGTGGATTAGTTACATCTTTGAAGGATTTCAGGATGCTTGATGACGATGCGTTGAGCAAGTTGTTTGATATTGTGTACATGACGAATAGTAAAAGACAGGATGAAGTTGAAAGCTTCAGTAAGACCAAATTTTCGGGTGTGCGTAGTGGTGCCAAGGACACTAAAACTGTTGCTGGGTTTCTTAAACTGGAGGATAGAGAAAAGCAGTTCATCGAAACAGAGAGATCGGTGTTGCTCAAAGCAATAAGTGTTATCCAGAGAGCTGCCCCACTGATGGAGGAGGTTTCACTTCTCATTGATGCAGTTTCTCAAATTGATGAGCCATTTTTACTGGTTATAGTGGGCGAATTTAACTCTGGTAAATCAACTGTTATTAATGCACTTCTTGGAAGAAGATATCTTAAAGAGGGGGTTGTTCCCACAACTAATGAGATCACCTTCTTACGCTATTCTGAGATGGATGGTGAGGAACAACATTGTGAAAGGCATCCAGATGGTCAATATATATGCTACCTTCCAGCTCCCATTCTTAAAGAAATGAACGTTGTTGATACACCTGGAACTAATGTGATTTTGCAAAGGCAACAACGCCTTACCGAGGAATTTGTACCCCGTGCTGATTTGCTTCTTTTTGTTATCTCTGCCGATCGCCCTTTAACTGAAAGCGAGGTTGCTTTCCTTCGGTACACTCAGCAGTGGAAGAAGAAAGTAGTATTTGTCTTGAACAAATCTGATATCTATCGAAATGCTCATGAGCTTGAGGAAGGTATGTCATTCATCAAGGAGAATACCCAGAAATTGCTGAATACTGAACATGTGACATTATTTCCCATCTCTGCACGAACTGCCCTTGAAGCAAAACTGTCATCTTCTGCTTTTGGGGAAGATTACGCAAATCTATCGGTATCTGATTCTCAGTGGAAAAGCAATAACTTCTATGAGCTTGAGAACTTCTTGTATAGTTTTTTAGATGGGTCAACAAGTACAGGAATGGAAAGAATGAAACTCAAACTAGAAACACCCATTGCAATTGCAGAGAAACTACTTTCTGCTTGTGAAACTCTTGTCACACAAGACTGCCGATATGCCAAGCAGGACTTGGCCTCAATAAATGATATAGTTGGCAGCGTAAAGAACTATGCAGTGAAGATGGAAAATGAGAGCATTGCTTGGAGAAGAAGAATCCTATCTGTGATTGATAATACAAAGTCACGTGTCGTGGAGCTCATAGAAGCTACTCTGCTTATATCAAATCTTGATCTTGTTGCTTTCTATGTTTTCAAAGGGGGAAAATCTGCTACCATTCCAGCCACCTCAAGGGTTCAGAATGACATTATAGGACCTGCACTTTCAGATGTGCAAAAACTCCTTGGAGAATACGTGATATGGCTGCAATCGGACAATGTTCAGGAAGGAAGAATGTACTCAAACACATTTGGAAAGCGTTTGCCTTCATTCGTACATCCACAGAGTCAGGTGGATTTGGAGATATTTGAATCTCTGGAAAAAGTAAATAAACACAGCTTGAAAGTGATAGAGGACTTCAGTGCCAATGCTGCTTCCAAATTGTTTGAGCAAGAAATACGTGAAGCGTTTCTTGGGACATTTGGTGGGCTAGGAGCAGCTGGTTTATCTGCTTCACTTTTGACAACTGTGCTACCGACCACTTTGGAAGATCTTCTTGCTCTTGGTCTTTGCTCAGCTGGCGGGTTTATAGCTATATCAAAATTTCCAGCTCGTAGGCAAGAGATGATAGAAAAGGTAAAAAGGACTGCGGATGGCTTGGCACGTGAGGTTGAACAGTCCATGCAGAGCGATCTTTCAGAAGCCATTGAGAACATGGAAAGGTTTGTGAAAAATGTCAGCCAGCCGTACCAAGATACAGCACAGCAGAGACTAGACAAACTCCTAGAGCTTCAGGATGAAATATCCAATGTTGATAAACAACTACAAACACTACGAATTGAAATCCAAAATCTTCACGTATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009668 GO:0009707 GO:0009791 GO:0009941 GO:0009987 GO:0010027 GO:0010228 GO:0010363 GO:0010941 GO:0016020 GO:0016043 GO:0019867 GO:0022414 GO:0031090 GO:0031347 GO:0031348 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0034051 GO:0042170 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045824 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0060548 GO:0061024 GO:0061458 GO:0065007 GO:0071840 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900424 GO:1900425 GO:1902477 GO:1902478

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N TMP-TENI

Protein Analysis

920

Amino Acids

102.24

Weight (kDa)

5.55

Isoelectric Point (pI)

42.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	367 - 413	8.5e-11	Dynamin family
GTP_EFTU	PF00009	367 - 543	4.4e-07	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	368 - 499	7.2e-14	50S ribosome-binding GTPase
Dynamin_N	PF00350	423 - 499	2.5e-09	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03160 AT1G03160 AT1G03160 AT1G03160
fragaria_vesca	FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600
malus_domestica	MD00G1063200.v1.1 MD11G1286100.v1.1 MD11G1311300.v1.1 MD11G1311400.v1.1 MD11G1311600.v1.1 MD11G1311700.v1.1 MD11G1312200.v1.1
prunus_persica	Prupe.8G241300_v2.0.a1
pyrus_communis	pycom11g25360
rosa_chinensis	RchiOBHm_Chr6g0291071
rosa_laevigata	RLG00000012149
rosa_multiflora	Rmu_co8364727.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176400
rosa_rugosa	Rorug06G0217300
rosa_samantha	Rh6AG327500 Rh6BG335000 Rh6CG341200 Rh6DG328500
rosa_wichuraiana	Rw6G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	273
Acc36I	ACCTGC	2 cut(s)	717, 2119
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	4 cut(s)	4, 219, 742, 917
AccII	CGCG	1 cut(s)	438
AciI	CCGC	9 cut(s)	91, 166, 363, 367, 381, 453, 591, 2475, 2543
AclI	AACGTT	1 cut(s)	1311
AcoI	YGGCCR	2 cut(s)	346, 364
AcsI	RAATTY	4 cut(s)	896, 1115, 1370, 2495
AcuI	CTGAAG	5 cut(s)	199, 285, 868, 2296, 2669
AcvI	CACGTG	2 cut(s)	1982, 2558
AcyI	GRCGYC	2 cut(s)	220, 270
AfaI	GTAC	8 cut(s)	6, 845, 1377, 1454, 1753, 2192, 2229, 2642
AfiI	CCNNNNNNNGG	5 cut(s)	256, 376, 1042, 1366, 2085
AflIII	ACRYGT	3 cut(s)	288, 1582, 1981
AjiI	CACGTC	1 cut(s)	289
AjnI	CCWGG	1 cut(s)	1324
AjuI	GAANNNNNNNTTGG	2 cut(s)	2349, 2381
Alw21I	GWGCWC	1 cut(s)	1995
Alw26I	GTCTC	2 cut(s)	402, 2656
AlwNI	CAGNNNCTG	1 cut(s)	587
AoxI	GGCC	4 cut(s)	346, 364, 378, 1869
ApeKI	GCWGC	8 cut(s)	449, 455, 587, 1031, 1893, 2158, 2324, 2390
ApoI	RAATTY	4 cut(s)	896, 1115, 1370, 2495
ArsI	GACNNNNNNTTYG	2 cut(s)	883, 915
AseI	ATTAAT	1 cut(s)	1143
Asp700I	GAANNNNTTC	4 cut(s)	654, 794, 2361, 2445
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	2 cut(s)	222, 438
AspS9I	GGNCC	3 cut(s)	235, 259, 2108
AsuC2I	CCSGG	2 cut(s)	207, 413
AsuHPI	GGTGA	3 cut(s)	154, 1195, 1244
AvaII	GGWCC	3 cut(s)	235, 259, 2108
BanI	GGYRCC	4 cut(s)	4, 219, 742, 917
BanII	GRGCYC	1 cut(s)	1995
BbrPI	CACGTG	2 cut(s)	1982, 2558
BbsI	GAAGAC	2 cut(s)	273, 485
Bbv12I	GWGCWC	1 cut(s)	1995
BbvI	GCAGC	8 cut(s)	461, 467, 574, 1018, 1905, 2145, 2311, 2402
BceAI	ACGGC	3 cut(s)	333, 376, 2623
BcgI	CGANNNNNNTGC	2 cut(s)	1650, 1684
BciT130I	CCWGG	1 cut(s)	1326
BcnI	CCSGG	2 cut(s)	207, 413
BcoDI	GTCTC	2 cut(s)	402, 2656
BfaI	CTAG	6 cut(s)	564, 768, 1781, 2384, 2666, 2678
BfoI	RGCGCY	1 cut(s)	223
BfuAI	ACCTGC	2 cut(s)	717, 2119
BglII	AGATCT	2 cut(s)	758, 2443
BlpI	GCTNAGC	1 cut(s)	2467
Bme1390I	CCNGG	3 cut(s)	207, 413, 1326
Bme18I	GGWCC	3 cut(s)	235, 259, 2108
BmgBI	CACGTC	1 cut(s)	289
BmgT120I	GGNCC	3 cut(s)	235, 259, 2108
BmiI	GGNNCC	6 cut(s)	6, 221, 237, 261, 744, 919
BmrFI	CCNGG	3 cut(s)	207, 413, 1326
BmrI	ACTGGG	1 cut(s)	193
BmsI	GCATC	6 cut(s)	568, 574, 792, 805, 1057, 1264
BmuI	ACTGGG	1 cut(s)	193
BpiI	GAAGAC	2 cut(s)	273, 485
BpmI	CTGGAG	2 cut(s)	586, 977
Bpu1102I	GCTNAGC	1 cut(s)	2467
BpuEI	CTTGAG	3 cut(s)	1547, 1733, 2068
BpuMI	CCSGG	2 cut(s)	207, 413
BsaAI	YACGTR	5 cut(s)	1982, 2149, 2354, 2558, 2752
BsaBI	GATNNNNATC	1 cut(s)	1506
BsaHI	GRCGYC	2 cut(s)	220, 270
BsaI	GGTCTC	1 cut(s)	402
BsaJI	CCNNGG	4 cut(s)	205, 921, 1365, 2137
BsaXI	ACNNNNNCTCC	4 cut(s)	27, 57, 2133, 2163
Bsc4I	CCNNNNNNNGG	5 cut(s)	256, 376, 1042, 1366, 2085
Bse1I	ACTGG	3 cut(s)	199, 960, 1104
Bse3DI	GCAATG	2 cut(s)	1791, 1932
Bse8I	GATNNNNATC	1 cut(s)	1506
BseBI	CCWGG	1 cut(s)	1326
BseDI	CCNNGG	4 cut(s)	205, 921, 1365, 2137
BseGI	GGATG	8 cut(s)	583, 807, 874, 1234, 1255, 2230, 2551, 2695
BseJI	GATNNNNATC	1 cut(s)	1506
BseLI	CCNNNNNNNGG	5 cut(s)	256, 376, 1042, 1366, 2085
BseMI	GCAATG	2 cut(s)	1791, 1932
BseMII	CTCAG	7 cut(s)	423, 729, 769, 1212, 1472, 1697, 2481
BseNI	ACTGG	3 cut(s)	199, 960, 1104
BseRI	GAGGAG	1 cut(s)	1061
BseX3I	CGGCCG	1 cut(s)	364
BseXI	GCAGC	8 cut(s)	461, 467, 574, 1018, 1905, 2145, 2311, 2402
BseYI	CCCAGC	1 cut(s)	941
BsgI	GTGCAG	3 cut(s)	593, 1590, 2097
Bsh1236I	CGCG	1 cut(s)	438
Bsh1285I	CGRYCG	2 cut(s)	367, 1417
BshFI	GGCC	4 cut(s)	348, 366, 380, 1871
BshNI	GGYRCC	4 cut(s)	4, 219, 742, 917
BsiEI	CGRYCG	2 cut(s)	367, 1417
BsiHKAI	GWGCWC	1 cut(s)	1995
BsiSI	CCGG	2 cut(s)	207, 412
BslFI	GGGAC	2 cut(s)	221, 2383
BslI	CCNNNNNNNGG	5 cut(s)	256, 376, 1042, 1366, 2085
BsmAI	GTCTC	2 cut(s)	402, 2656
BsmFI	GGGAC	2 cut(s)	221, 2383
BsnI	GGCC	4 cut(s)	348, 366, 380, 1871
Bso31I	GGTCTC	1 cut(s)	402
Bsp1286I	GDGCHC	1 cut(s)	1995
Bsp1407I	TGTACA	1 cut(s)	843
Bsp1720I	GCTNAGC	1 cut(s)	2467
BspACI	CCGC	9 cut(s)	91, 166, 363, 367, 381, 453, 591, 2475, 2543
BspANI	GGCC	4 cut(s)	348, 366, 380, 1871
BspCNI	CTCAG	7 cut(s)	424, 730, 768, 1213, 1471, 1696, 2480
BspFNI	CGCG	1 cut(s)	438
BspHI	TCATGA	1 cut(s)	1519
BspLI	GGNNCC	6 cut(s)	6, 221, 237, 261, 744, 919
BspMI	ACCTGC	2 cut(s)	717, 2119
BspT107I	GGYRCC	4 cut(s)	4, 219, 742, 917
BspTNI	GGTCTC	1 cut(s)	402
BsrDI	GCAATG	2 cut(s)	1791, 1932
BsrGI	TGTACA	1 cut(s)	843
BsrI	ACTGG	3 cut(s)	199, 960, 1104
BssECI	CCNNGG	4 cut(s)	205, 921, 1365, 2137
BssNI	GRCGYC	2 cut(s)	220, 270
BssT1I	CCWWGG	2 cut(s)	921, 2137
Bst2UI	CCWGG	1 cut(s)	1326
Bst4CI	ACNGT	5 cut(s)	937, 1138, 1632, 2422, 2571
BstACI	GRCGYC	2 cut(s)	220, 270
BstAPI	GCANNNNNTGC	3 cut(s)	461, 587, 1613
BstAUI	TGTACA	1 cut(s)	843
BstBAI	YACGTR	5 cut(s)	1982, 2149, 2354, 2558, 2752
BstC8I	GCNNGC	2 cut(s)	2473, 2636
BstDEI	CTNAG	7 cut(s)	432, 738, 755, 1221, 1458, 1683, 2467
BstENI	CCTNNNNNAGG	2 cut(s)	374, 1364
BstF5I	GGATG	8 cut(s)	583, 807, 874, 1234, 1255, 2230, 2551, 2695
BstFNI	CGCG	1 cut(s)	438
BstH2I	RGCGCY	1 cut(s)	223
BstHHI	GCGC	2 cut(s)	222, 438
BstMAI	GTCTC	2 cut(s)	402, 2656
BstMCI	CGRYCG	2 cut(s)	367, 1417
BstNI	CCWGG	1 cut(s)	1326
BstNSI	RCATGY	1 cut(s)	1586
BstSCI	CCNGG	3 cut(s)	205, 411, 1324
BstUI	CGCG	1 cut(s)	438
BstV1I	GCAGC	8 cut(s)	461, 467, 574, 1018, 1905, 2145, 2311, 2402
BstV2I	GAAGAC	2 cut(s)	273, 485
BstX2I	RGATCY	2 cut(s)	758, 2443
BstYI	RGATCY	2 cut(s)	758, 2443
BstZI	CGGCCG	1 cut(s)	364
BsuRI	GGCC	4 cut(s)	348, 366, 380, 1871
BtrI	CACGTC	1 cut(s)	289
BtsCI	GGATG	8 cut(s)	583, 807, 874, 1234, 1255, 2230, 2551, 2695
BtsI	GCAGTG	2 cut(s)	1469, 1917
BtsIMutI	CAGTG	5 cut(s)	1037, 1469, 1691, 1917, 2320
BveI	ACCTGC	2 cut(s)	717, 2119
Cac8I	GCNNGC	2 cut(s)	2473, 2636
CaiI	CAGNNNCTG	1 cut(s)	587
CciI	TCATGA	1 cut(s)	1519
CciNI	GCGGCCGC	1 cut(s)	364
CfoI	GCGC	2 cut(s)	222, 438
Cfr13I	GGNCC	3 cut(s)	235, 259, 2108
Csp6I	GTAC	8 cut(s)	5, 844, 1376, 1453, 1752, 2191, 2228, 2641
CviAII	CATG	5 cut(s)	847, 1520, 1583, 2575, 2608
CviQI	GTAC	8 cut(s)	5, 844, 1376, 1453, 1752, 2191, 2228, 2641
DdeI	CTNAG	7 cut(s)	432, 738, 755, 1221, 1458, 1683, 2467
DinI	GGCGCC	1 cut(s)	221
DraI	TTTAAA	1 cut(s)	682
EaeI	YGGCCR	2 cut(s)	346, 364
EagI	CGGCCG	1 cut(s)	364
Ecl136II	GAGCTC	1 cut(s)	1993
EclXI	CGGCCG	1 cut(s)	364
Eco130I	CCWWGG	2 cut(s)	921, 2137
Eco24I	GRGCYC	1 cut(s)	1995
Eco31I	GGTCTC	1 cut(s)	402
Eco32I	GATATC	3 cut(s)	445, 1166, 1504
Eco47I	GGWCC	3 cut(s)	235, 259, 2108
Eco52I	CGGCCG	1 cut(s)	364
Eco53kI	GAGCTC	1 cut(s)	1993
Eco57I	CTGAAG	5 cut(s)	199, 285, 868, 2296, 2669
Eco72I	CACGTG	2 cut(s)	1982, 2558
EcoICRI	GAGCTC	1 cut(s)	1993
EcoNI	CCTNNNNNAGG	2 cut(s)	374, 1364
EcoO109I	RGGNCCY	2 cut(s)	235, 2108
EcoRII	CCWGG	1 cut(s)	1324
EcoRV	GATATC	3 cut(s)	445, 1166, 1504
EcoT14I	CCWWGG	2 cut(s)	921, 2137
EcoT38I	GRGCYC	1 cut(s)	1995
EgeI	GGCGCC	1 cut(s)	221
EheI	GGCGCC	1 cut(s)	221
ErhI	CCWWGG	2 cut(s)	921, 2137
FaeI	CATG	5 cut(s)	850, 1523, 1586, 2578, 2611
FalI	AAGNNNNNCTT	6 cut(s)	1850, 1882, 2349, 2381, 2433, 2465
FaqI	GGGAC	2 cut(s)	221, 2383
FatI	CATG	5 cut(s)	846, 1519, 1582, 2574, 2607
FauI	CCCGC	3 cut(s)	98, 173, 2468
FokI	GGATG	8 cut(s)	590, 814, 881, 1241, 1242, 2217, 2558, 2702
FriOI	GRGCYC	1 cut(s)	1995
FspBI	CTAG	6 cut(s)	564, 768, 1781, 2384, 2666, 2678
GlaI	GCGC	2 cut(s)	221, 437
GsaI	CCCAGC	1 cut(s)	945
GsuI	CTGGAG	2 cut(s)	586, 977
HaeII	RGCGCY	1 cut(s)	223
HaeIII	GGCC	4 cut(s)	348, 366, 380, 1871
HapII	CCGG	2 cut(s)	207, 412
HhaI	GCGC	2 cut(s)	222, 438
Hin1I	GRCGYC	2 cut(s)	220, 270
Hin1II	CATG	5 cut(s)	850, 1523, 1586, 2578, 2611
Hin6I	GCGC	2 cut(s)	220, 436
HinP1I	GCGC	2 cut(s)	220, 436
HincII	GTYRAC	1 cut(s)	1746
HindII	GTYRAC	1 cut(s)	1746
HindIII	AAGCTT	1 cut(s)	880
HinfI	GANTC	6 cut(s)	472, 539, 1679, 1950, 2239, 2264
HpaII	CCGG	2 cut(s)	207, 412
HphI	GGTGA	3 cut(s)	154, 1195, 1244
Hpy166II	GTNNAC	3 cut(s)	844, 1455, 1746
Hpy8I	GTNNAC	3 cut(s)	844, 1455, 1746
Hpy99I	CGWCG	3 cut(s)	117, 287, 290
HpyAV	CCTTC	8 cut(s)	605, 784, 1216, 1292, 1457, 1526, 2174, 2229
HpyCH4III	ACNGT	5 cut(s)	937, 1138, 1632, 2422, 2571
HpyCH4IV	ACGT	8 cut(s)	270, 288, 1311, 1981, 2148, 2353, 2557, 2751
HpyF3I	CTNAG	7 cut(s)	432, 738, 755, 1221, 1458, 1683, 2467
HpySE526I	ACGT	8 cut(s)	270, 288, 1311, 1981, 2148, 2353, 2557, 2751
Hsp92I	GRCGYC	2 cut(s)	220, 270
Hsp92II	CATG	5 cut(s)	850, 1523, 1586, 2578, 2611
HspAI	GCGC	2 cut(s)	220, 436
KasI	GGCGCC	1 cut(s)	219
KpnI	GGTACC	1 cut(s)	8
LmnI	GCTCC	5 cut(s)	611, 614, 1294, 1990, 2387
Lsp1109I	GCAGC	8 cut(s)	461, 467, 574, 1018, 1905, 2145, 2311, 2402
LweI	GCATC	6 cut(s)	568, 574, 792, 805, 1057, 1264
MaeI	CTAG	6 cut(s)	564, 768, 1781, 2384, 2666, 2678
MaeII	ACGT	8 cut(s)	270, 288, 1311, 1981, 2148, 2353, 2557, 2751
MaeIII	GTNAC	5 cut(s)	706, 778, 1585, 1834, 1977
MfeI	CAATTG	2 cut(s)	254, 1797
MflI	RGATCY	2 cut(s)	758, 2443
MhlI	GDGCHC	1 cut(s)	1995
Mly113I	GGCGCC	1 cut(s)	220
MlyI	GAGTC	1 cut(s)	2248
MmeI	TCCRAC	3 cut(s)	306, 385, 521
MroXI	GAANNNNTTC	4 cut(s)	654, 794, 2361, 2445
MseI	TTAA	7 cut(s)	681, 951, 1119, 1143, 1170, 1299, 1424
MslI	CAYNNNNRTG	2 cut(s)	521, 1260
MspA1I	CMGCKG	2 cut(s)	2393, 2471
MspI	CCGG	2 cut(s)	207, 412
MspR9I	CCNGG	3 cut(s)	207, 413, 1326
MunI	CAATTG	2 cut(s)	254, 1797
MvaI	CCWGG	1 cut(s)	1326
MvnI	CGCG	1 cut(s)	438
NarI	GGCGCC	1 cut(s)	220
NciI	CCSGG	2 cut(s)	207, 413
NlaIII	CATG	5 cut(s)	850, 1523, 1586, 2578, 2611
NlaIV	GGNNCC	6 cut(s)	6, 221, 237, 261, 744, 919
NmuCI	GTSAC	4 cut(s)	706, 1585, 1834, 1977
NotI	GCGGCCGC	1 cut(s)	364
NspI	RCATGY	1 cut(s)	1586
PagI	TCATGA	1 cut(s)	1519
PciI	ACATGT	1 cut(s)	1582
PdmI	GAANNNNTTC	4 cut(s)	654, 794, 2361, 2445
PfeI	GAWTC	5 cut(s)	472, 539, 1679, 1950, 2264
Ple19I	CGATCG	1 cut(s)	1417
PleI	GAGTC	1 cut(s)	2247
PluTI	GGCGCC	1 cut(s)	223
PmaCI	CACGTG	2 cut(s)	1982, 2558
PmlI	CACGTG	2 cut(s)	1982, 2558
PpsI	GAGTC	1 cut(s)	2247
Ppu21I	YACGTR	5 cut(s)	1982, 2149, 2354, 2558, 2752
PpuMI	RGGWCCY	2 cut(s)	235, 2108
PscI	ACATGT	1 cut(s)	1582
PshBI	ATTAAT	1 cut(s)	1143
Psp124BI	GAGCTC	1 cut(s)	1995
Psp1406I	AACGTT	1 cut(s)	1311
Psp5II	RGGWCCY	2 cut(s)	235, 2108
Psp6I	CCWGG	1 cut(s)	1324
PspCI	CACGTG	2 cut(s)	1982, 2558
PspFI	CCCAGC	1 cut(s)	941
PspGI	CCWGG	1 cut(s)	1324
PspN4I	GGNNCC	6 cut(s)	6, 221, 237, 261, 744, 919
PspPI	GGNCC	3 cut(s)	235, 259, 2108
PspPPI	RGGWCCY	2 cut(s)	235, 2108
PstNI	CAGNNNCTG	1 cut(s)	587
PsuI	RGATCY	2 cut(s)	758, 2443
PvuI	CGATCG	1 cut(s)	1417
PvuII	CAGCTG	2 cut(s)	2393, 2471
RsaI	GTAC	8 cut(s)	6, 845, 1377, 1454, 1753, 2192, 2229, 2642
RsaNI	GTAC	8 cut(s)	5, 844, 1376, 1453, 1752, 2191, 2228, 2641
RseI	CAYNNNNRTG	2 cut(s)	521, 1260
SacI	GAGCTC	1 cut(s)	1995
SaqAI	TTAA	7 cut(s)	681, 951, 1119, 1143, 1170, 1299, 1424
Sau96I	GGNCC	3 cut(s)	235, 259, 2108
SchI	GAGTC	1 cut(s)	2248
ScrFI	CCNGG	3 cut(s)	207, 413, 1326
SduI	GDGCHC	1 cut(s)	1995
SfaNI	GCATC	6 cut(s)	568, 574, 792, 805, 1057, 1264
SfoI	GGCGCC	1 cut(s)	221
SinI	GGWCC	3 cut(s)	235, 259, 2108
SmiMI	CAYNNNNRTG	2 cut(s)	521, 1260
SmlI	CTYRAG	3 cut(s)	1526, 1712, 2083
SmoI	CTYRAG	3 cut(s)	1526, 1712, 2083
SsiI	CCGC	9 cut(s)	91, 166, 363, 367, 381, 453, 591, 2475, 2543
SspDI	GGCGCC	1 cut(s)	219
SspMI	CTAG	6 cut(s)	564, 768, 1781, 2384, 2666, 2678
SstI	GAGCTC	1 cut(s)	1995
StyD4I	CCNGG	3 cut(s)	205, 411, 1324
StyI	CCWWGG	2 cut(s)	921, 2137
TaaI	ACNGT	5 cut(s)	937, 1138, 1632, 2422, 2571
TaiI	ACGT	8 cut(s)	273, 291, 1314, 1984, 2151, 2356, 2560, 2754
TaqI	TCGA	4 cut(s)	303, 342, 981, 1510
TatI	WGTACW	3 cut(s)	843, 1751, 2190
TauI	GCSGC	5 cut(s)	366, 369, 383, 455, 593
TfiI	GAWTC	5 cut(s)	472, 539, 1679, 1950, 2264
Tru1I	TTAA	7 cut(s)	681, 951, 1119, 1143, 1170, 1299, 1424
Tru9I	TTAA	7 cut(s)	681, 951, 1119, 1143, 1170, 1299, 1424
TscAI	CASTG	5 cut(s)	1044, 1469, 1691, 1917, 2320
TseFI	GTSAC	4 cut(s)	706, 1585, 1834, 1977
TseI	GCWGC	8 cut(s)	449, 455, 587, 1031, 1893, 2158, 2324, 2390
Tsp45I	GTSAC	4 cut(s)	706, 1585, 1834, 1977
TspDTI	ATGAA	9 cut(s)	6, 708, 885, 967, 1322, 1534, 1784, 2211, 2706
TspRI	CASTG	5 cut(s)	1044, 1469, 1691, 1917, 2320
VpaK11BI	GGWCC	3 cut(s)	235, 259, 2108
VspI	ATTAAT	1 cut(s)	1143
XagI	CCTNNNNNAGG	2 cut(s)	374, 1364
XapI	RAATTY	4 cut(s)	896, 1115, 1370, 2495
XceI	RCATGY	1 cut(s)	1586
XcmI	CCANNNNNNNNNTGG	3 cut(s)	206, 1864, 2605
XmnI	GAANNNNTTC	4 cut(s)	654, 794, 2361, 2445
XspI	CTAG	6 cut(s)	564, 768, 1781, 2384, 2666, 2678
ZraI	GACGTC	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.