Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0005859

Physical Location & Seq

Genomic Coordinates Forward (+)

52558330 .. 52563929

Gene Structure 5600 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G028490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

ATGGTACCCCTCATTTCCTTCCACACCTCCACAACACACCCTCTCCTACTAACCCCAACCTCAACCCCGTTCCTCCCCCGCCGCCCCAAATCCCACCTCCCCCGACGAACCCACTTCCCCATTTCCTCAATCTCCCAGAACCCAAATCAGTTCACCCGCCAAAACCCACAACCCCAGCCCCCAAGAACCCAGTTCCCCGGTGGCTTCAGGCGCCCAGAAATCAAGCTCCCCAACATCGTCCTCCAATTGGACCCTGAAGACGTCTTGGCTTCCGACGACGTGTTGGGTTTGGTCGATAAAGCTGTGTCCAAATGGGTTGGGATTCTTGTCCTCGACGGCCGTGAAGCTAACGGCGGCCGCCTCTATGAGGCCGCCTGTAAGTTGAAGTCGGTGGTCGGAGACCGGGCTTACTTGTTGATCTCTGAGCGCGTGGATATCGCAGCCGCAGCTAATGCGAGTGGGATTCTGCTCTCCGATCAAGGTCTTCCGACCATTGTAGCAAGAAGCACAATGATGGCTTCAAAATCTGATTCGGTAGTGCTTCCTTTGGTGGCTAGGAATGTGCAGGACGCAGATGCTGCCGTAAAAGCCTCCAGCTCTGAAGGAGCTGATTTTCTTATATATAGTGTTGATGGAGAGGAAAATGTTCCTGCTGTATTGAACTCTCTGTTTAAAAATGTGAAGATACCGATATTTGTCACGATCAGTTCATACGGCAGGTTATATACAGAGGTGCCAGGACTACTCAGATCTGGGGCTAGTGGATTAGTTACATCTTTGAAGGATTTCAGGATGCTTGATGACGATGCGTTGAACAAGTTGTTTGATATTGTGTACATGGCAAATAGTAAAAGACAGGATGAAGTTGAAAGCTTCAGTAAGACCAAATTTTCGGGTGTGCGTAGTGGTGCCAAGGACACTAAAACTGTTGCTGGGTTTCTTAAACTGGAGGATAGAGAAAAGCAGTTCATCGAAACAGAGAGATCGGTGTTGCTCAAAGCAATAAGTGTTATCCAGAGAGCTGCCCCACTGATGGAGGAGGTTTCACTTCTCATTGATGCAGTTTCTCAAATTGATGAGCCATTTTTACTGGTTATAGTGGGCGAATTTAACTCTGGTAAATCAACTGTTATTAATGCACTTCTTGGAAGAAGATATCTTGAAGAGGGGGTTGTTCCCACAACTAATGAGATCACCTTCTTACGCTATTCTGAGATGGATGGTGAGGAACAACATTGTGAAAGGCATCCAGATGGTCAATATATATGCTACCTTCCCGCTCCCATTCTTAAAGAAATGAACGTTGTTGATACACCTGGAACTAATGTGATTTTGCAAAGGCAACAACGCCTTACCGAGGAATTTGTACCCCGTGCTGATTTGCTTCTTTTTGTTATCTCTGCCGATCGCCCTTTAACTGAAAGCGAGGTTGCTTTCCTTCGGTACACCCAGCAGTGGAAGAAGAAAGTAGTGTTTGTCTTGAACAAATCTGATATCTATCGGAATGCTCATGAGCTTGAGGAAGGTATGTCATTCATCAAGGAGAATACCCAGAAATTGCTGAATACTGAACATGTGACATTATTTCCCATCTCTGCACGAACTGCTCTTGAGGCAAAACTGTCATCTTCTGCTTTTGGGGAAGATTATGCAAAACTATCTGTATCTGATTCTCAGTGGAAAAGCAATAACTTCTATGAGCTTGAGAACTTCTTGTATAGTTTTTTAGATGGGTCAACAAGTGCAGGAATGGAAAGAATGAAACTCAAACTAGAAACACCCATTGCAATTGCAGAGAAACTACTTTCTGCTTGTGAAACTCTTGTCACACAAGACTGCCGATATGCCAAGCAGGACTTGGCCTCAATAAATGATATAGTTGGCAGCGTAAAGAACTATGCAGTGAAGATGGAAAATGAGAGCATTGCTTGGAGAAGAAGAATCCTATCTGTGATTGATACTACAAAGTCACGTGTTGTGGAGCTCATAGAAGCTACTCTGCTTATATCAAATCTTGATCTTGTTGCTTTCTATGTTTTCAAAGGGGGAAAATCTGCTACCATTCCAGCCACCTCAAGGTTTCAGAATGACATTATAGGACCTGCACTTTCAGATGTGCAAAAACTCCTTGGAGAATACGTGATATGGCTGCAATCGGACAATGTTCAGGAAGGAAGAATGTACTCAAACACATTTGGAAAGCGTTTGCCTTCATTCGTATATCCACAGAGTCAGGTGGATTTGGAGATATTTGAATCTCTGGAAAAAGTAAATAAACACAGCTTGAAAGTGATAGAGGACTTCAGTGCCAATGCTGCTTCCAAATTGTTTGAGCAAGAAATACGTGAAGCGTTTCTTGGGACATTTGGTGGGCTAGGAGCAGCTGGTTTATCTGCTTCACTTTTGACGACTGTGCTGCCGACCACTTTGGAAGATCTTCTTGCTCTTGGTCTTTGCTCAGCTGGCGGGTTTATAGCTATTTCAAAATTTCCAGCTCGTAGGCAAGAGATGATAGAAAAGGTAAAAAGGACTGCGGATGGTTTGGCACGTGAGGTTGAACAGTCCATGCAGAACGATCTTTCAGAAGCCATTGAGAACATGGAAAGGTTTGTGAAAAATGTCAGCCAGCCGTACCAAGATACAGCACAGCAGAGACTAGACAAACTCCTAGAGCTTCAGGATGAAATATCCAATGTTGATAAACAACTACAAACACTACGAATTGAAATCCAAAATCTTCACGTATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009668 GO:0009707 GO:0009791 GO:0009941 GO:0009987 GO:0010027 GO:0010228 GO:0010363 GO:0010941 GO:0016020 GO:0016043 GO:0019867 GO:0022414 GO:0031090 GO:0031347 GO:0031348 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0034051 GO:0042170 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045824 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0060548 GO:0061024 GO:0061458 GO:0065007 GO:0071840 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900424 GO:1900425 GO:1902477 GO:1902478

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N TMP-TENI

Protein Analysis

916

Amino Acids

101.99

Weight (kDa)

5.44

Isoelectric Point (pI)

43.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	364 - 410	1e-10	Dynamin family
GTP_EFTU	PF00009	364 - 540	5.3e-07	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	365 - 496	7.7e-14	50S ribosome-binding GTPase
Dynamin_N	PF00350	420 - 496	2.5e-09	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03160 AT1G03160 AT1G03160 AT1G03160
fragaria_vesca	FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600
malus_domestica	MD00G1063200.v1.1 MD11G1286100.v1.1 MD11G1311300.v1.1 MD11G1311400.v1.1 MD11G1311600.v1.1 MD11G1311700.v1.1 MD11G1312200.v1.1
prunus_persica	Prupe.8G241300_v2.0.a1
pyrus_communis	pycom11g25360
rosa_chinensis	RchiOBHm_Chr6g0291071
rosa_laevigata	RLG00000012149
rosa_multiflora	Rmu_co8364727.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176400
rosa_rugosa	Rorug06G0217300
rosa_samantha	Rh6AG327500 Rh6BG335000 Rh6CG341200 Rh6DG328500
rosa_wichuraiana	Rw6G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	264
Acc36I	ACCTGC	2 cut(s)	708, 2110
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	4 cut(s)	4, 210, 733, 908
AccBSI	CCGCTC	1 cut(s)	1280
AccII	CGCG	1 cut(s)	429
AclI	AACGTT	1 cut(s)	1302
AcoI	YGGCCR	2 cut(s)	337, 355
AcsI	RAATTY	4 cut(s)	887, 1106, 1361, 2486
AcuI	CTGAAG	6 cut(s)	190, 276, 621, 859, 2287, 2660
AcvI	CACGTG	2 cut(s)	1973, 2549
AcyI	GRCGYC	2 cut(s)	211, 261
AfaI	GTAC	6 cut(s)	6, 836, 1368, 1445, 2183, 2633
AfiI	CCNNNNNNNGG	6 cut(s)	247, 367, 1033, 1357, 1455, 2076
AflIII	ACRYGT	3 cut(s)	279, 1573, 1972
AjiI	CACGTC	1 cut(s)	280
AjnI	CCWGG	2 cut(s)	736, 1315
AjuI	GAANNNNNNNTTGG	2 cut(s)	2340, 2372
Alw21I	GWGCWC	1 cut(s)	1986
Alw26I	GTCTC	2 cut(s)	393, 2647
AlwNI	CAGNNNCTG	1 cut(s)	578
AoxI	GGCC	4 cut(s)	337, 355, 369, 1860
ApeKI	GCWGC	9 cut(s)	440, 446, 578, 1022, 1884, 2149, 2315, 2381, 2416
ApoI	RAATTY	4 cut(s)	887, 1106, 1361, 2486
ArsI	GACNNNNNNTTYG	2 cut(s)	874, 906
AseI	ATTAAT	1 cut(s)	1134
Asp700I	GAANNNNTTC	4 cut(s)	645, 785, 2352, 2436
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	2 cut(s)	213, 429
AspS9I	GGNCC	2 cut(s)	250, 2099
AsuC2I	CCSGG	2 cut(s)	198, 404
AsuHPI	GGTGA	3 cut(s)	145, 1186, 1235
AvaII	GGWCC	2 cut(s)	250, 2099
BanI	GGYRCC	4 cut(s)	4, 210, 733, 908
BanII	GRGCYC	1 cut(s)	1986
BbrPI	CACGTG	2 cut(s)	1973, 2549
BbsI	GAAGAC	2 cut(s)	264, 476
Bbv12I	GWGCWC	1 cut(s)	1986
BbvI	GCAGC	9 cut(s)	452, 458, 565, 1009, 1896, 2136, 2302, 2393, 2403
BceAI	ACGGC	6 cut(s)	324, 352, 367, 566, 730, 2614
BcgI	CGANNNNNNTGC	2 cut(s)	2398, 2432
BciT130I	CCWGG	2 cut(s)	738, 1317
BcnI	CCSGG	2 cut(s)	198, 404
BcoDI	GTCTC	2 cut(s)	393, 2647
BfaI	CTAG	6 cut(s)	555, 759, 1772, 2375, 2657, 2669
BfoI	RGCGCY	1 cut(s)	214
BfuAI	ACCTGC	2 cut(s)	708, 2110
BglII	AGATCT	2 cut(s)	749, 2434
BlpI	GCTNAGC	1 cut(s)	2458
Bme1390I	CCNGG	4 cut(s)	198, 404, 738, 1317
Bme18I	GGWCC	2 cut(s)	250, 2099
BmgBI	CACGTC	1 cut(s)	280
BmgT120I	GGNCC	2 cut(s)	250, 2099
BmiI	GGNNCC	5 cut(s)	6, 212, 252, 735, 910
BmrFI	CCNGG	4 cut(s)	198, 404, 738, 1317
BmrI	ACTGGG	1 cut(s)	184
BmsI	GCATC	5 cut(s)	565, 783, 796, 1048, 1255
BmuI	ACTGGG	1 cut(s)	184
BpiI	GAAGAC	2 cut(s)	264, 476
BpmI	CTGGAG	2 cut(s)	577, 968
Bpu1102I	GCTNAGC	1 cut(s)	2458
BpuEI	CTTGAG	4 cut(s)	1538, 1631, 1724, 2059
BpuMI	CCSGG	2 cut(s)	198, 404
BsaAI	YACGTR	5 cut(s)	1973, 2140, 2345, 2549, 2743
BsaBI	GATNNNNATC	1 cut(s)	1497
BsaHI	GRCGYC	2 cut(s)	211, 261
BsaI	GGTCTC	1 cut(s)	393
BsaJI	CCNNGG	4 cut(s)	196, 912, 1356, 2128
BsaXI	ACNNNNNCTCC	4 cut(s)	27, 57, 2124, 2154
Bsc4I	CCNNNNNNNGG	6 cut(s)	247, 367, 1033, 1357, 1455, 2076
Bse1I	ACTGG	3 cut(s)	190, 951, 1095
Bse3DI	GCAATG	2 cut(s)	1782, 1923
Bse8I	GATNNNNATC	1 cut(s)	1497
BseBI	CCWGG	2 cut(s)	738, 1317
BseDI	CCNNGG	4 cut(s)	196, 912, 1356, 2128
BseGI	GGATG	6 cut(s)	798, 865, 1225, 1246, 2542, 2686
BseJI	GATNNNNATC	1 cut(s)	1497
BseLI	CCNNNNNNNGG	6 cut(s)	247, 367, 1033, 1357, 1455, 2076
BseMI	GCAATG	2 cut(s)	1782, 1923
BseMII	CTCAG	5 cut(s)	414, 760, 1203, 1688, 2472
BseNI	ACTGG	3 cut(s)	190, 951, 1095
BseRI	GAGGAG	1 cut(s)	1052
BseX3I	CGGCCG	2 cut(s)	337, 355
BseXI	GCAGC	9 cut(s)	452, 458, 565, 1009, 1896, 2136, 2302, 2393, 2403
BseYI	CCCAGC	3 cut(s)	174, 932, 1449
BsgI	GTGCAG	4 cut(s)	584, 1581, 1764, 2088
Bsh1236I	CGCG	1 cut(s)	429
Bsh1285I	CGRYCG	3 cut(s)	340, 358, 1408
BshFI	GGCC	4 cut(s)	339, 357, 371, 1862
BshNI	GGYRCC	4 cut(s)	4, 210, 733, 908
BsiEI	CGRYCG	3 cut(s)	340, 358, 1408
BsiHKAI	GWGCWC	1 cut(s)	1986
BsiSI	CCGG	2 cut(s)	198, 403
BslFI	GGGAC	1 cut(s)	2374
BslI	CCNNNNNNNGG	6 cut(s)	247, 367, 1033, 1357, 1455, 2076
BsmAI	GTCTC	2 cut(s)	393, 2647
BsmFI	GGGAC	1 cut(s)	2374
BsmI	GAATGC	1 cut(s)	1510
BsnI	GGCC	4 cut(s)	339, 357, 371, 1862
Bso31I	GGTCTC	1 cut(s)	393
Bsp1286I	GDGCHC	1 cut(s)	1986
Bsp1407I	TGTACA	1 cut(s)	834
Bsp1720I	GCTNAGC	1 cut(s)	2458
BspANI	GGCC	4 cut(s)	339, 357, 371, 1862
BspCNI	CTCAG	5 cut(s)	415, 759, 1204, 1687, 2471
BspFNI	CGCG	1 cut(s)	429
BspHI	TCATGA	1 cut(s)	1510
BspLI	GGNNCC	5 cut(s)	6, 212, 252, 735, 910
BspMI	ACCTGC	2 cut(s)	708, 2110
BspT107I	GGYRCC	4 cut(s)	4, 210, 733, 908
BspTNI	GGTCTC	1 cut(s)	393
BsrBI	CCGCTC	1 cut(s)	1280
BsrDI	GCAATG	2 cut(s)	1782, 1923
BsrGI	TGTACA	1 cut(s)	834
BsrI	ACTGG	3 cut(s)	190, 951, 1095
BssECI	CCNNGG	4 cut(s)	196, 912, 1356, 2128
BssNI	GRCGYC	2 cut(s)	211, 261
BssT1I	CCWWGG	2 cut(s)	912, 2128
Bst2UI	CCWGG	2 cut(s)	738, 1317
Bst4CI	ACNGT	5 cut(s)	928, 1129, 1623, 2413, 2562
Bst6I	CTCTTC	1 cut(s)	1158
BstACI	GRCGYC	2 cut(s)	211, 261
BstAPI	GCANNNNNTGC	3 cut(s)	452, 578, 1604
BstAUI	TGTACA	1 cut(s)	834
BstBAI	YACGTR	5 cut(s)	1973, 2140, 2345, 2549, 2743
BstC8I	GCNNGC	2 cut(s)	2464, 2627
BstDEI	CTNAG	5 cut(s)	423, 746, 1212, 1674, 2458
BstENI	CCTNNNNNAGG	2 cut(s)	365, 1355
BstF5I	GGATG	6 cut(s)	798, 865, 1225, 1246, 2542, 2686
BstFNI	CGCG	1 cut(s)	429
BstH2I	RGCGCY	1 cut(s)	214
BstHHI	GCGC	2 cut(s)	213, 429
BstMAI	GTCTC	2 cut(s)	393, 2647
BstMCI	CGRYCG	3 cut(s)	340, 358, 1408
BstMWI	GCNNNNNNNGC	9 cut(s)	210, 446, 452, 578, 587, 1604, 1613, 2315, 2463
BstNI	CCWGG	2 cut(s)	738, 1317
BstNSI	RCATGY	1 cut(s)	1577
BstSCI	CCNGG	4 cut(s)	196, 402, 736, 1315
BstUI	CGCG	1 cut(s)	429
BstV1I	GCAGC	9 cut(s)	452, 458, 565, 1009, 1896, 2136, 2302, 2393, 2403
BstV2I	GAAGAC	2 cut(s)	264, 476
BstX2I	RGATCY	2 cut(s)	749, 2434
BstYI	RGATCY	2 cut(s)	749, 2434
BstZI	CGGCCG	2 cut(s)	337, 355
BsuRI	GGCC	4 cut(s)	339, 357, 371, 1862
BtrI	CACGTC	1 cut(s)	280
BtsCI	GGATG	6 cut(s)	798, 865, 1225, 1246, 2542, 2686
BtsI	GCAGTG	2 cut(s)	1460, 1908
BtsIMutI	CAGTG	5 cut(s)	1028, 1460, 1682, 1908, 2311
BveI	ACCTGC	2 cut(s)	708, 2110
Cac8I	GCNNGC	2 cut(s)	2464, 2627
CaiI	CAGNNNCTG	1 cut(s)	578
CciI	TCATGA	1 cut(s)	1510
CciNI	GCGGCCGC	1 cut(s)	355
CfoI	GCGC	2 cut(s)	213, 429
Cfr13I	GGNCC	2 cut(s)	250, 2099
CseI	GACGC	1 cut(s)	578
Csp6I	GTAC	6 cut(s)	5, 835, 1367, 1444, 2182, 2632
CviAII	CATG	5 cut(s)	838, 1511, 1574, 2566, 2599
CviQI	GTAC	6 cut(s)	5, 835, 1367, 1444, 2182, 2632
DdeI	CTNAG	5 cut(s)	423, 746, 1212, 1674, 2458
DinI	GGCGCC	1 cut(s)	212
DraI	TTTAAA	1 cut(s)	673
EaeI	YGGCCR	2 cut(s)	337, 355
EagI	CGGCCG	2 cut(s)	337, 355
Eam1104I	CTCTTC	1 cut(s)	1158
EarI	CTCTTC	1 cut(s)	1158
Ecl136II	GAGCTC	1 cut(s)	1984
EclXI	CGGCCG	2 cut(s)	337, 355
Eco130I	CCWWGG	2 cut(s)	912, 2128
Eco24I	GRGCYC	1 cut(s)	1986
Eco31I	GGTCTC	1 cut(s)	393
Eco32I	GATATC	3 cut(s)	436, 1157, 1495
Eco47I	GGWCC	2 cut(s)	250, 2099
Eco52I	CGGCCG	2 cut(s)	337, 355
Eco53kI	GAGCTC	1 cut(s)	1984
Eco57I	CTGAAG	6 cut(s)	190, 276, 621, 859, 2287, 2660
Eco72I	CACGTG	2 cut(s)	1973, 2549
EcoICRI	GAGCTC	1 cut(s)	1984
EcoNI	CCTNNNNNAGG	2 cut(s)	365, 1355
EcoO109I	RGGNCCY	1 cut(s)	2099
EcoRII	CCWGG	2 cut(s)	736, 1315
EcoRV	GATATC	3 cut(s)	436, 1157, 1495
EcoT14I	CCWWGG	2 cut(s)	912, 2128
EcoT38I	GRGCYC	1 cut(s)	1986
EgeI	GGCGCC	1 cut(s)	212
EheI	GGCGCC	1 cut(s)	212
ErhI	CCWWGG	2 cut(s)	912, 2128
FaeI	CATG	5 cut(s)	841, 1514, 1577, 2569, 2602
FalI	AAGNNNNNCTT	6 cut(s)	1841, 1873, 2340, 2372, 2424, 2456
FaqI	GGGAC	1 cut(s)	2374
FatI	CATG	5 cut(s)	837, 1510, 1573, 2565, 2598
FauI	CCCGC	4 cut(s)	86, 164, 1285, 2459
FokI	GGATG	6 cut(s)	805, 872, 1232, 1233, 2549, 2693
FriOI	GRGCYC	1 cut(s)	1986
FspBI	CTAG	6 cut(s)	555, 759, 1772, 2375, 2657, 2669
GlaI	GCGC	2 cut(s)	212, 428
GsaI	CCCAGC	3 cut(s)	178, 936, 1453
GsuI	CTGGAG	2 cut(s)	577, 968
HaeII	RGCGCY	1 cut(s)	214
HaeIII	GGCC	4 cut(s)	339, 357, 371, 1862
HapII	CCGG	2 cut(s)	198, 403
HgaI	GACGC	1 cut(s)	578
HhaI	GCGC	2 cut(s)	213, 429
Hin1I	GRCGYC	2 cut(s)	211, 261
Hin1II	CATG	5 cut(s)	841, 1514, 1577, 2569, 2602
Hin6I	GCGC	2 cut(s)	211, 427
HinP1I	GCGC	2 cut(s)	211, 427
HincII	GTYRAC	1 cut(s)	1737
HindII	GTYRAC	1 cut(s)	1737
HindIII	AAGCTT	1 cut(s)	871
HinfI	GANTC	7 cut(s)	322, 463, 530, 1670, 1941, 2230, 2255
HpaII	CCGG	2 cut(s)	198, 403
HphI	GGTGA	3 cut(s)	145, 1186, 1235
Hpy166II	GTNNAC	4 cut(s)	153, 835, 1446, 1737
Hpy8I	GTNNAC	4 cut(s)	153, 835, 1446, 1737
Hpy99I	CGWCG	4 cut(s)	108, 278, 281, 338
HpyAV	CCTTC	9 cut(s)	28, 596, 775, 1207, 1283, 1448, 1517, 2165, 2220
HpyCH4III	ACNGT	5 cut(s)	928, 1129, 1623, 2413, 2562
HpyCH4IV	ACGT	8 cut(s)	261, 279, 1302, 1972, 2139, 2344, 2548, 2742
HpyF10VI	GCNNNNNNNGC	9 cut(s)	210, 446, 452, 578, 587, 1604, 1613, 2315, 2463
HpyF3I	CTNAG	5 cut(s)	423, 746, 1212, 1674, 2458
HpySE526I	ACGT	8 cut(s)	261, 279, 1302, 1972, 2139, 2344, 2548, 2742
Hsp92I	GRCGYC	2 cut(s)	211, 261
Hsp92II	CATG	5 cut(s)	841, 1514, 1577, 2569, 2602
HspAI	GCGC	2 cut(s)	211, 427
KasI	GGCGCC	1 cut(s)	210
KpnI	GGTACC	1 cut(s)	8
LmnI	GCTCC	5 cut(s)	231, 605, 1285, 1981, 2378
Lsp1109I	GCAGC	9 cut(s)	452, 458, 565, 1009, 1896, 2136, 2302, 2393, 2403
LweI	GCATC	5 cut(s)	565, 783, 796, 1048, 1255
MaeI	CTAG	6 cut(s)	555, 759, 1772, 2375, 2657, 2669
MaeII	ACGT	8 cut(s)	261, 279, 1302, 1972, 2139, 2344, 2548, 2742
MaeIII	GTNAC	5 cut(s)	697, 769, 1576, 1825, 1968
MbiI	CCGCTC	1 cut(s)	1280
MfeI	CAATTG	2 cut(s)	245, 1788
MflI	RGATCY	2 cut(s)	749, 2434
MhlI	GDGCHC	1 cut(s)	1986
Mly113I	GGCGCC	1 cut(s)	211
MlyI	GAGTC	1 cut(s)	2239
MmeI	TCCRAC	3 cut(s)	297, 376, 512
MroXI	GAANNNNTTC	4 cut(s)	645, 785, 2352, 2436
MseI	TTAA	6 cut(s)	672, 942, 1110, 1134, 1290, 1415
MslI	CAYNNNNRTG	2 cut(s)	512, 1251
MspA1I	CMGCKG	2 cut(s)	2384, 2462
MspI	CCGG	2 cut(s)	198, 403
MspR9I	CCNGG	4 cut(s)	198, 404, 738, 1317
MunI	CAATTG	2 cut(s)	245, 1788
Mva1269I	GAATGC	1 cut(s)	1510
MvaI	CCWGG	2 cut(s)	738, 1317
MvnI	CGCG	1 cut(s)	429
MwoI	GCNNNNNNNGC	9 cut(s)	210, 446, 452, 578, 587, 1604, 1613, 2315, 2463
NarI	GGCGCC	1 cut(s)	211
NciI	CCSGG	2 cut(s)	198, 404
NlaIII	CATG	5 cut(s)	841, 1514, 1577, 2569, 2602
NlaIV	GGNNCC	5 cut(s)	6, 212, 252, 735, 910
NmuCI	GTSAC	4 cut(s)	697, 1576, 1825, 1968
NotI	GCGGCCGC	1 cut(s)	355
NspI	RCATGY	1 cut(s)	1577
PagI	TCATGA	1 cut(s)	1510
PciI	ACATGT	1 cut(s)	1573
PctI	GAATGC	1 cut(s)	1510
PdmI	GAANNNNTTC	4 cut(s)	645, 785, 2352, 2436
PfeI	GAWTC	6 cut(s)	322, 463, 530, 1670, 1941, 2255
Ple19I	CGATCG	1 cut(s)	1408
PleI	GAGTC	1 cut(s)	2238
PluTI	GGCGCC	1 cut(s)	214
PmaCI	CACGTG	2 cut(s)	1973, 2549
PmlI	CACGTG	2 cut(s)	1973, 2549
PpsI	GAGTC	1 cut(s)	2238
Ppu21I	YACGTR	5 cut(s)	1973, 2140, 2345, 2549, 2743
PpuMI	RGGWCCY	1 cut(s)	2099
PscI	ACATGT	1 cut(s)	1573
PshBI	ATTAAT	1 cut(s)	1134
Psp124BI	GAGCTC	1 cut(s)	1986
Psp1406I	AACGTT	1 cut(s)	1302
Psp5II	RGGWCCY	1 cut(s)	2099
Psp6I	CCWGG	2 cut(s)	736, 1315
PspCI	CACGTG	2 cut(s)	1973, 2549
PspFI	CCCAGC	3 cut(s)	174, 932, 1449
PspGI	CCWGG	2 cut(s)	736, 1315
PspN4I	GGNNCC	5 cut(s)	6, 212, 252, 735, 910
PspPI	GGNCC	2 cut(s)	250, 2099
PspPPI	RGGWCCY	1 cut(s)	2099
PstNI	CAGNNNCTG	1 cut(s)	578
PsuI	RGATCY	2 cut(s)	749, 2434
PvuI	CGATCG	1 cut(s)	1408
PvuII	CAGCTG	2 cut(s)	2384, 2462
RsaI	GTAC	6 cut(s)	6, 836, 1368, 1445, 2183, 2633
RsaNI	GTAC	6 cut(s)	5, 835, 1367, 1444, 2182, 2632
RseI	CAYNNNNRTG	2 cut(s)	512, 1251
SacI	GAGCTC	1 cut(s)	1986
SaqAI	TTAA	6 cut(s)	672, 942, 1110, 1134, 1290, 1415
Sau96I	GGNCC	2 cut(s)	250, 2099
SchI	GAGTC	1 cut(s)	2239
ScrFI	CCNGG	4 cut(s)	198, 404, 738, 1317
SduI	GDGCHC	1 cut(s)	1986
SfaNI	GCATC	5 cut(s)	565, 783, 796, 1048, 1255
SfoI	GGCGCC	1 cut(s)	212
SinI	GGWCC	2 cut(s)	250, 2099
SmiMI	CAYNNNNRTG	2 cut(s)	512, 1251
SmlI	CTYRAG	4 cut(s)	1517, 1610, 1703, 2074
SmoI	CTYRAG	4 cut(s)	1517, 1610, 1703, 2074
SspDI	GGCGCC	1 cut(s)	210
SspMI	CTAG	6 cut(s)	555, 759, 1772, 2375, 2657, 2669
SstI	GAGCTC	1 cut(s)	1986
StyD4I	CCNGG	4 cut(s)	196, 402, 736, 1315
StyI	CCWWGG	2 cut(s)	912, 2128
TaaI	ACNGT	5 cut(s)	928, 1129, 1623, 2413, 2562
TaiI	ACGT	8 cut(s)	264, 282, 1305, 1975, 2142, 2347, 2551, 2745
TaqI	TCGA	3 cut(s)	294, 333, 972
TatI	WGTACW	2 cut(s)	834, 2181
TauI	GCSGC	5 cut(s)	84, 357, 360, 374, 446
TfiI	GAWTC	6 cut(s)	322, 463, 530, 1670, 1941, 2255
Tru1I	TTAA	6 cut(s)	672, 942, 1110, 1134, 1290, 1415
Tru9I	TTAA	6 cut(s)	672, 942, 1110, 1134, 1290, 1415
TscAI	CASTG	5 cut(s)	1035, 1460, 1682, 1908, 2311
TseFI	GTSAC	4 cut(s)	697, 1576, 1825, 1968
TseI	GCWGC	9 cut(s)	440, 446, 578, 1022, 1884, 2149, 2315, 2381, 2416
Tsp45I	GTSAC	4 cut(s)	697, 1576, 1825, 1968
TspDTI	ATGAA	8 cut(s)	699, 876, 958, 1313, 1525, 1775, 2202, 2697
TspRI	CASTG	5 cut(s)	1035, 1460, 1682, 1908, 2311
VpaK11BI	GGWCC	2 cut(s)	250, 2099
VspI	ATTAAT	1 cut(s)	1134
XagI	CCTNNNNNAGG	2 cut(s)	365, 1355
XapI	RAATTY	4 cut(s)	887, 1106, 1361, 2486
XceI	RCATGY	1 cut(s)	1577
XcmI	CCANNNNNNNNNTGG	3 cut(s)	197, 1855, 2596
XmnI	GAANNNNTTC	4 cut(s)	645, 785, 2352, 2436
XspI	CTAG	6 cut(s)	555, 759, 1772, 2375, 2657, 2669
ZraI	GACGTC	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.