Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0005859

Physical Location & Seq

Genomic Coordinates Forward (+)

52963479 .. 52970361

Gene Structure 6883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG327500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGTACCCCTCATTTCCTTCCACACCTCCACAACACACCCTCTCCTACTAACCCCAACCTCAACCCCGTTCCTCCCCCGCCGCCCCAAATCCCACCTCCCCCGACGAACCCACTTCCCCATTTCCTCAATCTCCCAGAACCCAAATCAGTTCACCCGCCAAAACCCACAACCCCAGCCCCCAAGAACCCAGTTCCCCGGTGGCTTCAGGCGCCCAGAAATCAAGCTCCCCAACATCGTCCTCCAATTGGACCCTGAAGACGTCTTGGCTTCCGACGACGTGTTGGGTTTGGTCGATAAAGCTGTGTCCAAATGGGTTGGGATTCTTGTCCTCGACGGCCGTGAAGCTAACGGCGGCCGCCTCTATGAGGCCGCCTGTAAGTTGAAGTCGGTGGTCGGAGACCGGGCTTACTTGTTGATCTCTGAGCGCGTGGATATCGCAGCCGCAGCTAATGCGAGTGGGATTCTGCTCTCCGATCAAGGTCTTCCGACCATTGTAGCAAGAAGCACAATGATGGCTTCAAAATCTGATTCGGTAGTGCTTCCTTTGGTGGCTAGGAATGTGCAGGACGCAGATGCTGCCGTAAAAGCCTCCAGCTCTGAAGGAGCTGATTTTCTTATATATAGTGTTGATGGAGAGGAAAATGTTCCTGCTGTATTGAACTCTCTGTTTAAAAATGTGAAGATACCGATATTTGTCACGATCAGTTCATACGGCAGGTTATATACAGAGGTGCCAGGACTACTCAGATCTGGGGCTAGTGGATTAGTTACATCTTTGAAGGATTTCAGGATGCTTGATGACGATGCGTTGAACAAGTTGTTTGATATTGTGTACATGGCAAATAGTAAAAGACAGGATGAAGTTGAAAGCTTCAGTAAGACCAAATTTTCGGGTGTGCGTAGTGGTGCCAAGGACACTAAAACTGTTGCTGGGTTTCTTAAACTGGAGGATAGAGAAAAGCAGTTCATCGAAACAGAGAGATCGGTGTTGCTCAAAGCAATAAGTGTTATCCAGAGAGCTGCCCCACTGATGGAGGAGGTTTCACTTCTCATTGATGCAGTTTCTCAAATTGATGAGCCATTTTTACTGGTTATAGTGGGCGAATTTAACTCTGGTAAATCAACTGTTATTAATGCACTTCTTGGAAGAAGATATCTTGAAGAGGGGGTTGTTCCCACAACTAATGAGATCACCTTCTTACGCTATTCTGAGATGGATGGTGAGGAACAACATTGTGAAAGGCATCCAGATGGTCAATATATATGCTACCTTCCCGCTCCCATTCTTAAAGAAATGAACGTTGTTGATACACCTGGAACTAATGTGATTTTGCAAAGGCAACAACGCCTTACCGAGGAATTTGTACCCCGTGCTGATTTGCTTCTTTTTGTTATCTCTGCCGATCGCCCTTTAACTGAAAGCGAGGTTGCTTTCCTTCGGTACACCCAGCAGTGGAAGAAGAAAGTAGTGTTTGTCTTGAACAAATCTGATATCTATCGGAATGCTCATGAGCTTGAGGAAGGTATGTCATTCATCAAGGAGAATACCCAGAAATTGCTGAATACTGAACATGTGACATTATTTCCCATCTCTGCACGAACTGCTCTTGAGGCAAAACTGTCATCTTCTGCTTTTGGGGAAGATTATGCAAAACTATCTGTATCTGATTCTCAGTGGAAAAGCAATAACTTCTATGAGCTTGAGAACTTCTTGTATAGTTTTTTAGATGGGTCAACAAGTGCAGGAATGGAAAGAATGAAACTCAAACTAGAAACACCCATTGCAATTGCAGAGAAACTACTTTCTGCTTGTGAAACTCTTGTCACACAAGACTGCCGATATGCCAAGCAGGACTTGGCCTCAATAAATGATATAGTTGGCAGCGTAAAGAACTATGCAGTGAAGATGGAAAATGAGAGCATTGCTTGGAGAAGAAGAATCCTATCTGTGATTGATACTACAAAGTCACGTGTTGTGGAGCTCATAGAAGCTACTCTGCTTATATCAAATCTTGATCTTGTTGCTTTCTATGTTTTCAAAGGGGGAAAATCTGCTACCATTCCAGCCACCTCAAGGTTTCAGAATGACATTATAGGACCTGCACTTTCAGATGTGCAAGTAAGTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009668 GO:0009707 GO:0009791 GO:0009941 GO:0009987 GO:0010027 GO:0010228 GO:0010363 GO:0010941 GO:0016020 GO:0016043 GO:0019867 GO:0022414 GO:0031090 GO:0031347 GO:0031348 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0034051 GO:0042170 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045824 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0060548 GO:0061024 GO:0061458 GO:0065007 GO:0071840 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900424 GO:1900425 GO:1902477 GO:1902478

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N TMP-TENI

Protein Analysis

710

Amino Acids

78.82

Weight (kDa)

5.75

Isoelectric Point (pI)

39.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	364 - 410	7.4e-11	Dynamin family
GTP_EFTU	PF00009	364 - 540	3.3e-07	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	365 - 496	5.2e-14	50S ribosome-binding GTPase
Dynamin_N	PF00350	420 - 496	1.8e-09	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03160 AT1G03160 AT1G03160 AT1G03160
fragaria_vesca	FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600
malus_domestica	MD00G1063200.v1.1 MD11G1286100.v1.1 MD11G1311300.v1.1 MD11G1311400.v1.1 MD11G1311600.v1.1 MD11G1311700.v1.1 MD11G1312200.v1.1
prunus_persica	Prupe.8G241300_v2.0.a1
pyrus_communis	pycom11g25360
rosa_chinensis	RchiOBHm_Chr6g0291071
rosa_laevigata	RLG00000012149
rosa_multiflora	Rmu_co8364727.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176400
rosa_rugosa	Rorug06G0217300
rosa_samantha	Rh6AG327500 Rh6BG335000 Rh6CG341200 Rh6DG328500
rosa_wichuraiana	Rw6G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	264
Acc36I	ACCTGC	2 cut(s)	708, 2110
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	4 cut(s)	4, 210, 733, 908
AccBSI	CCGCTC	1 cut(s)	1280
AccII	CGCG	1 cut(s)	429
AciI	CCGC	8 cut(s)	79, 82, 157, 354, 358, 372, 444, 1278
AclI	AACGTT	1 cut(s)	1302
AcoI	YGGCCR	2 cut(s)	337, 355
AcsI	RAATTY	3 cut(s)	887, 1106, 1361
AcuI	CTGAAG	4 cut(s)	190, 276, 621, 859
AcvI	CACGTG	1 cut(s)	1973
AcyI	GRCGYC	2 cut(s)	211, 261
AfaI	GTAC	4 cut(s)	6, 836, 1368, 1445
AfiI	CCNNNNNNNGG	6 cut(s)	247, 367, 1033, 1357, 1455, 2076
AflIII	ACRYGT	3 cut(s)	279, 1573, 1972
AgsI	TTSAA	9 cut(s)	385, 522, 661, 781, 814, 869, 1163, 1483, 2041
AjiI	CACGTC	1 cut(s)	280
AjnI	CCWGG	2 cut(s)	736, 1315
Alw21I	GWGCWC	1 cut(s)	1986
Alw26I	GTCTC	1 cut(s)	393
AlwNI	CAGNNNCTG	1 cut(s)	578
AoxI	GGCC	4 cut(s)	337, 355, 369, 1860
ApeKI	GCWGC	5 cut(s)	440, 446, 578, 1022, 1884
ApoI	RAATTY	3 cut(s)	887, 1106, 1361
ArsI	GACNNNNNNTTYG	2 cut(s)	874, 906
AseI	ATTAAT	1 cut(s)	1134
Asp700I	GAANNNNTTC	2 cut(s)	645, 785
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	2 cut(s)	213, 429
AspS9I	GGNCC	2 cut(s)	250, 2099
AsuC2I	CCSGG	2 cut(s)	198, 404
AsuHPI	GGTGA	3 cut(s)	145, 1186, 1235
AvaII	GGWCC	2 cut(s)	250, 2099
BanI	GGYRCC	4 cut(s)	4, 210, 733, 908
BanII	GRGCYC	1 cut(s)	1986
BbrPI	CACGTG	1 cut(s)	1973
BbsI	GAAGAC	2 cut(s)	264, 476
Bbv12I	GWGCWC	1 cut(s)	1986
BbvI	GCAGC	5 cut(s)	452, 458, 565, 1009, 1896
BccI	CCATC	9 cut(s)	508, 626, 1027, 1210, 1214, 1247, 1598, 1724, 1903
BceAI	ACGGC	5 cut(s)	324, 352, 367, 566, 730
BciT130I	CCWGG	2 cut(s)	738, 1317
BcnI	CCSGG	2 cut(s)	198, 404
BcoDI	GTCTC	1 cut(s)	393
BfaI	CTAG	3 cut(s)	555, 759, 1772
BfoI	RGCGCY	1 cut(s)	214
BfuAI	ACCTGC	2 cut(s)	708, 2110
BglII	AGATCT	1 cut(s)	749
Bme1390I	CCNGG	4 cut(s)	198, 404, 738, 1317
Bme18I	GGWCC	2 cut(s)	250, 2099
BmgBI	CACGTC	1 cut(s)	280
BmgT120I	GGNCC	2 cut(s)	250, 2099
BmiI	GGNNCC	5 cut(s)	6, 212, 252, 735, 910
BmrFI	CCNGG	4 cut(s)	198, 404, 738, 1317
BmrI	ACTGGG	1 cut(s)	184
BmsI	GCATC	5 cut(s)	565, 783, 796, 1048, 1255
BmuI	ACTGGG	1 cut(s)	184
BpiI	GAAGAC	2 cut(s)	264, 476
BpmI	CTGGAG	2 cut(s)	577, 968
BpuEI	CTTGAG	4 cut(s)	1538, 1631, 1724, 2059
BpuMI	CCSGG	2 cut(s)	198, 404
BsaAI	YACGTR	1 cut(s)	1973
BsaBI	GATNNNNATC	1 cut(s)	1497
BsaHI	GRCGYC	2 cut(s)	211, 261
BsaI	GGTCTC	1 cut(s)	393
BsaJI	CCNNGG	3 cut(s)	196, 912, 1356
BsaXI	ACNNNNNCTCC	2 cut(s)	27, 57
Bsc4I	CCNNNNNNNGG	6 cut(s)	247, 367, 1033, 1357, 1455, 2076
Bse1I	ACTGG	3 cut(s)	190, 951, 1095
Bse3DI	GCAATG	2 cut(s)	1782, 1923
Bse8I	GATNNNNATC	1 cut(s)	1497
BseBI	CCWGG	2 cut(s)	738, 1317
BseDI	CCNNGG	3 cut(s)	196, 912, 1356
BseGI	GGATG	4 cut(s)	798, 865, 1225, 1246
BseJI	GATNNNNATC	1 cut(s)	1497
BseLI	CCNNNNNNNGG	6 cut(s)	247, 367, 1033, 1357, 1455, 2076
BseMI	GCAATG	2 cut(s)	1782, 1923
BseMII	CTCAG	4 cut(s)	414, 760, 1203, 1688
BseNI	ACTGG	3 cut(s)	190, 951, 1095
BseRI	GAGGAG	1 cut(s)	1052
BseX3I	CGGCCG	2 cut(s)	337, 355
BseXI	GCAGC	5 cut(s)	452, 458, 565, 1009, 1896
BseYI	CCCAGC	3 cut(s)	174, 932, 1449
BsgI	GTGCAG	4 cut(s)	584, 1581, 1764, 2088
Bsh1236I	CGCG	1 cut(s)	429
Bsh1285I	CGRYCG	3 cut(s)	340, 358, 1408
BshFI	GGCC	4 cut(s)	339, 357, 371, 1862
BshNI	GGYRCC	4 cut(s)	4, 210, 733, 908
BsiEI	CGRYCG	3 cut(s)	340, 358, 1408
BsiHKAI	GWGCWC	1 cut(s)	1986
BsiSI	CCGG	2 cut(s)	198, 403
BslI	CCNNNNNNNGG	6 cut(s)	247, 367, 1033, 1357, 1455, 2076
BsmAI	GTCTC	1 cut(s)	393
BsmI	GAATGC	1 cut(s)	1510
BsnI	GGCC	4 cut(s)	339, 357, 371, 1862
Bso31I	GGTCTC	1 cut(s)	393
Bsp1286I	GDGCHC	1 cut(s)	1986
Bsp1407I	TGTACA	1 cut(s)	834
Bsp143I	GATC	8 cut(s)	417, 475, 702, 749, 983, 1191, 1405, 2017
BspACI	CCGC	8 cut(s)	79, 82, 157, 354, 358, 372, 444, 1278
BspANI	GGCC	4 cut(s)	339, 357, 371, 1862
BspCNI	CTCAG	4 cut(s)	415, 759, 1204, 1687
BspFNI	CGCG	1 cut(s)	429
BspHI	TCATGA	1 cut(s)	1510
BspLI	GGNNCC	5 cut(s)	6, 212, 252, 735, 910
BspMI	ACCTGC	2 cut(s)	708, 2110
BspT107I	GGYRCC	4 cut(s)	4, 210, 733, 908
BspTNI	GGTCTC	1 cut(s)	393
BsrBI	CCGCTC	1 cut(s)	1280
BsrDI	GCAATG	2 cut(s)	1782, 1923
BsrGI	TGTACA	1 cut(s)	834
BsrI	ACTGG	3 cut(s)	190, 951, 1095
BssECI	CCNNGG	3 cut(s)	196, 912, 1356
BssMI	GATC	8 cut(s)	417, 475, 702, 749, 983, 1191, 1405, 2017
BssNI	GRCGYC	2 cut(s)	211, 261
BssT1I	CCWWGG	1 cut(s)	912
Bst2UI	CCWGG	2 cut(s)	738, 1317
Bst4CI	ACNGT	3 cut(s)	928, 1129, 1623
Bst6I	CTCTTC	1 cut(s)	1158
BstACI	GRCGYC	2 cut(s)	211, 261
BstAPI	GCANNNNNTGC	3 cut(s)	452, 578, 1604
BstAUI	TGTACA	1 cut(s)	834
BstBAI	YACGTR	1 cut(s)	1973
BstDEI	CTNAG	4 cut(s)	423, 746, 1212, 1674
BstENI	CCTNNNNNAGG	2 cut(s)	365, 1355
BstF5I	GGATG	4 cut(s)	798, 865, 1225, 1246
BstFNI	CGCG	1 cut(s)	429
BstH2I	RGCGCY	1 cut(s)	214
BstHHI	GCGC	2 cut(s)	213, 429
BstKTI	GATC	8 cut(s)	420, 478, 705, 752, 986, 1194, 1408, 2020
BstMAI	GTCTC	1 cut(s)	393
BstMBI	GATC	8 cut(s)	417, 475, 702, 749, 983, 1191, 1405, 2017
BstMCI	CGRYCG	3 cut(s)	340, 358, 1408
BstMWI	GCNNNNNNNGC	7 cut(s)	210, 446, 452, 578, 587, 1604, 1613
BstNI	CCWGG	2 cut(s)	738, 1317
BstNSI	RCATGY	1 cut(s)	1577
BstSCI	CCNGG	4 cut(s)	196, 402, 736, 1315
BstUI	CGCG	1 cut(s)	429
BstV1I	GCAGC	5 cut(s)	452, 458, 565, 1009, 1896
BstV2I	GAAGAC	2 cut(s)	264, 476
BstX2I	RGATCY	1 cut(s)	749
BstYI	RGATCY	1 cut(s)	749
BstZI	CGGCCG	2 cut(s)	337, 355
BsuRI	GGCC	4 cut(s)	339, 357, 371, 1862
BtrI	CACGTC	1 cut(s)	280
BtsCI	GGATG	4 cut(s)	798, 865, 1225, 1246
BtsI	GCAGTG	2 cut(s)	1460, 1908
BtsIMutI	CAGTG	4 cut(s)	1028, 1460, 1682, 1908
BveI	ACCTGC	2 cut(s)	708, 2110
CaiI	CAGNNNCTG	1 cut(s)	578
CciI	TCATGA	1 cut(s)	1510
CciNI	GCGGCCGC	1 cut(s)	355
CfoI	GCGC	2 cut(s)	213, 429
Cfr13I	GGNCC	2 cut(s)	250, 2099
CseI	GACGC	1 cut(s)	578
Csp6I	GTAC	4 cut(s)	5, 835, 1367, 1444
CviAII	CATG	3 cut(s)	838, 1511, 1574
CviQI	GTAC	4 cut(s)	5, 835, 1367, 1444
DdeI	CTNAG	4 cut(s)	423, 746, 1212, 1674
DinI	GGCGCC	1 cut(s)	212
DpnI	GATC	8 cut(s)	419, 477, 704, 751, 985, 1193, 1407, 2019
DpnII	GATC	8 cut(s)	417, 475, 702, 749, 983, 1191, 1405, 2017
DraI	TTTAAA	1 cut(s)	673
EaeI	YGGCCR	2 cut(s)	337, 355
EagI	CGGCCG	2 cut(s)	337, 355
Eam1104I	CTCTTC	1 cut(s)	1158
EarI	CTCTTC	1 cut(s)	1158
Ecl136II	GAGCTC	1 cut(s)	1984
EclXI	CGGCCG	2 cut(s)	337, 355
Eco130I	CCWWGG	1 cut(s)	912
Eco24I	GRGCYC	1 cut(s)	1986
Eco31I	GGTCTC	1 cut(s)	393
Eco32I	GATATC	3 cut(s)	436, 1157, 1495
Eco47I	GGWCC	2 cut(s)	250, 2099
Eco52I	CGGCCG	2 cut(s)	337, 355
Eco53kI	GAGCTC	1 cut(s)	1984
Eco57I	CTGAAG	4 cut(s)	190, 276, 621, 859
Eco72I	CACGTG	1 cut(s)	1973
EcoICRI	GAGCTC	1 cut(s)	1984
EcoNI	CCTNNNNNAGG	2 cut(s)	365, 1355
EcoO109I	RGGNCCY	1 cut(s)	2099
EcoRII	CCWGG	2 cut(s)	736, 1315
EcoRV	GATATC	3 cut(s)	436, 1157, 1495
EcoT14I	CCWWGG	1 cut(s)	912
EcoT38I	GRGCYC	1 cut(s)	1986
EgeI	GGCGCC	1 cut(s)	212
EheI	GGCGCC	1 cut(s)	212
ErhI	CCWWGG	1 cut(s)	912
FaeI	CATG	3 cut(s)	841, 1514, 1577
FalI	AAGNNNNNCTT	2 cut(s)	1841, 1873
FatI	CATG	3 cut(s)	837, 1510, 1573
FauI	CCCGC	3 cut(s)	86, 164, 1285
FokI	GGATG	4 cut(s)	805, 872, 1232, 1233
FriOI	GRGCYC	1 cut(s)	1986
FspBI	CTAG	3 cut(s)	555, 759, 1772
GlaI	GCGC	2 cut(s)	212, 428
GsaI	CCCAGC	3 cut(s)	178, 936, 1453
GsuI	CTGGAG	2 cut(s)	577, 968
HaeII	RGCGCY	1 cut(s)	214
HaeIII	GGCC	4 cut(s)	339, 357, 371, 1862
HapII	CCGG	2 cut(s)	198, 403
HgaI	GACGC	1 cut(s)	578
HhaI	GCGC	2 cut(s)	213, 429
Hin1I	GRCGYC	2 cut(s)	211, 261
Hin1II	CATG	3 cut(s)	841, 1514, 1577
Hin6I	GCGC	2 cut(s)	211, 427
HinP1I	GCGC	2 cut(s)	211, 427
HincII	GTYRAC	1 cut(s)	1737
HindII	GTYRAC	1 cut(s)	1737
HindIII	AAGCTT	1 cut(s)	871
HinfI	GANTC	5 cut(s)	322, 463, 530, 1670, 1941
HpaII	CCGG	2 cut(s)	198, 403
HphI	GGTGA	3 cut(s)	145, 1186, 1235
Hpy166II	GTNNAC	4 cut(s)	153, 835, 1446, 1737
Hpy188III	TCNNGA	9 cut(s)	700, 790, 1015, 1160, 1250, 1480, 1511, 1610, 2015
Hpy8I	GTNNAC	4 cut(s)	153, 835, 1446, 1737
Hpy99I	CGWCG	4 cut(s)	108, 278, 281, 338
HpyAV	CCTTC	7 cut(s)	28, 596, 775, 1207, 1283, 1448, 1517
HpyCH4III	ACNGT	3 cut(s)	928, 1129, 1623
HpyCH4IV	ACGT	4 cut(s)	261, 279, 1302, 1972
HpyF10VI	GCNNNNNNNGC	7 cut(s)	210, 446, 452, 578, 587, 1604, 1613
HpyF3I	CTNAG	4 cut(s)	423, 746, 1212, 1674
HpySE526I	ACGT	4 cut(s)	261, 279, 1302, 1972
Hsp92I	GRCGYC	2 cut(s)	211, 261
Hsp92II	CATG	3 cut(s)	841, 1514, 1577
HspAI	GCGC	2 cut(s)	211, 427
KasI	GGCGCC	1 cut(s)	210
KpnI	GGTACC	1 cut(s)	8
Kzo9I	GATC	8 cut(s)	417, 475, 702, 749, 983, 1191, 1405, 2017
LmnI	GCTCC	4 cut(s)	231, 605, 1285, 1981
Lsp1109I	GCAGC	5 cut(s)	452, 458, 565, 1009, 1896
LweI	GCATC	5 cut(s)	565, 783, 796, 1048, 1255
MaeI	CTAG	3 cut(s)	555, 759, 1772
MaeII	ACGT	4 cut(s)	261, 279, 1302, 1972
MaeIII	GTNAC	5 cut(s)	697, 769, 1576, 1825, 1968
MalI	GATC	8 cut(s)	419, 477, 704, 751, 985, 1193, 1407, 2019
MbiI	CCGCTC	1 cut(s)	1280
MboI	GATC	8 cut(s)	417, 475, 702, 749, 983, 1191, 1405, 2017
MfeI	CAATTG	2 cut(s)	245, 1788
MflI	RGATCY	1 cut(s)	749
MhlI	GDGCHC	1 cut(s)	1986
MluCI	AATT	7 cut(s)	245, 887, 1071, 1106, 1361, 1556, 1788
Mly113I	GGCGCC	1 cut(s)	211
MmeI	TCCRAC	3 cut(s)	297, 376, 512
MroXI	GAANNNNTTC	2 cut(s)	645, 785
MseI	TTAA	6 cut(s)	672, 942, 1110, 1134, 1290, 1415
MslI	CAYNNNNRTG	2 cut(s)	512, 1251
MspI	CCGG	2 cut(s)	198, 403
MspR9I	CCNGG	4 cut(s)	198, 404, 738, 1317
MunI	CAATTG	2 cut(s)	245, 1788
Mva1269I	GAATGC	1 cut(s)	1510
MvaI	CCWGG	2 cut(s)	738, 1317
MvnI	CGCG	1 cut(s)	429
MwoI	GCNNNNNNNGC	7 cut(s)	210, 446, 452, 578, 587, 1604, 1613
NarI	GGCGCC	1 cut(s)	211
NciI	CCSGG	2 cut(s)	198, 404
NdeII	GATC	8 cut(s)	417, 475, 702, 749, 983, 1191, 1405, 2017
NlaIII	CATG	3 cut(s)	841, 1514, 1577
NlaIV	GGNNCC	5 cut(s)	6, 212, 252, 735, 910
NmuCI	GTSAC	4 cut(s)	697, 1576, 1825, 1968
NotI	GCGGCCGC	1 cut(s)	355
NspI	RCATGY	1 cut(s)	1577
PagI	TCATGA	1 cut(s)	1510
PciI	ACATGT	1 cut(s)	1573
PctI	GAATGC	1 cut(s)	1510
PdmI	GAANNNNTTC	2 cut(s)	645, 785
PfeI	GAWTC	5 cut(s)	322, 463, 530, 1670, 1941
Ple19I	CGATCG	1 cut(s)	1408
PluTI	GGCGCC	1 cut(s)	214
PmaCI	CACGTG	1 cut(s)	1973
PmlI	CACGTG	1 cut(s)	1973
Ppu21I	YACGTR	1 cut(s)	1973
PpuMI	RGGWCCY	1 cut(s)	2099
PscI	ACATGT	1 cut(s)	1573
PshBI	ATTAAT	1 cut(s)	1134
Psp124BI	GAGCTC	1 cut(s)	1986
Psp1406I	AACGTT	1 cut(s)	1302
Psp5II	RGGWCCY	1 cut(s)	2099
Psp6I	CCWGG	2 cut(s)	736, 1315
PspCI	CACGTG	1 cut(s)	1973
PspFI	CCCAGC	3 cut(s)	174, 932, 1449
PspGI	CCWGG	2 cut(s)	736, 1315
PspN4I	GGNNCC	5 cut(s)	6, 212, 252, 735, 910
PspPI	GGNCC	2 cut(s)	250, 2099
PspPPI	RGGWCCY	1 cut(s)	2099
PstNI	CAGNNNCTG	1 cut(s)	578
PsuI	RGATCY	1 cut(s)	749
PvuI	CGATCG	1 cut(s)	1408
RsaI	GTAC	4 cut(s)	6, 836, 1368, 1445
RsaNI	GTAC	4 cut(s)	5, 835, 1367, 1444
RseI	CAYNNNNRTG	2 cut(s)	512, 1251
SacI	GAGCTC	1 cut(s)	1986
SaqAI	TTAA	6 cut(s)	672, 942, 1110, 1134, 1290, 1415
Sau3AI	GATC	8 cut(s)	417, 475, 702, 749, 983, 1191, 1405, 2017
Sau96I	GGNCC	2 cut(s)	250, 2099
ScrFI	CCNGG	4 cut(s)	198, 404, 738, 1317
SduI	GDGCHC	1 cut(s)	1986
SfaNI	GCATC	5 cut(s)	565, 783, 796, 1048, 1255
SfoI	GGCGCC	1 cut(s)	212
SinI	GGWCC	2 cut(s)	250, 2099
SmiMI	CAYNNNNRTG	2 cut(s)	512, 1251
SmlI	CTYRAG	4 cut(s)	1517, 1610, 1703, 2074
SmoI	CTYRAG	4 cut(s)	1517, 1610, 1703, 2074
Sse9I	AATT	7 cut(s)	245, 887, 1071, 1106, 1361, 1556, 1788
SsiI	CCGC	8 cut(s)	79, 82, 157, 354, 358, 372, 444, 1278
SspDI	GGCGCC	1 cut(s)	210
SspMI	CTAG	3 cut(s)	555, 759, 1772
SstI	GAGCTC	1 cut(s)	1986
StyD4I	CCNGG	4 cut(s)	196, 402, 736, 1315
StyI	CCWWGG	1 cut(s)	912
TaaI	ACNGT	3 cut(s)	928, 1129, 1623
TaiI	ACGT	4 cut(s)	264, 282, 1305, 1975
TaqI	TCGA	3 cut(s)	294, 333, 972
TasI	AATT	7 cut(s)	245, 887, 1071, 1106, 1361, 1556, 1788
TatI	WGTACW	1 cut(s)	834
TauI	GCSGC	5 cut(s)	84, 357, 360, 374, 446
TfiI	GAWTC	5 cut(s)	322, 463, 530, 1670, 1941
Tru1I	TTAA	6 cut(s)	672, 942, 1110, 1134, 1290, 1415
Tru9I	TTAA	6 cut(s)	672, 942, 1110, 1134, 1290, 1415
TscAI	CASTG	4 cut(s)	1035, 1460, 1682, 1908
TseFI	GTSAC	4 cut(s)	697, 1576, 1825, 1968
TseI	GCWGC	5 cut(s)	440, 446, 578, 1022, 1884
Tsp45I	GTSAC	4 cut(s)	697, 1576, 1825, 1968
TspDTI	ATGAA	7 cut(s)	699, 876, 958, 1313, 1525, 1775, 2118
TspRI	CASTG	4 cut(s)	1035, 1460, 1682, 1908
VpaK11BI	GGWCC	2 cut(s)	250, 2099
VspI	ATTAAT	1 cut(s)	1134
XagI	CCTNNNNNAGG	2 cut(s)	365, 1355
XapI	RAATTY	3 cut(s)	887, 1106, 1361
XceI	RCATGY	1 cut(s)	1577
XcmI	CCANNNNNNNNNTGG	2 cut(s)	197, 1855
XmnI	GAANNNNTTC	2 cut(s)	645, 785
XspI	CTAG	3 cut(s)	555, 759, 1772
ZraI	GACGTC	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.