Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0005859

Physical Location & Seq

Genomic Coordinates Forward (+)

53226388 .. 53232464

Gene Structure 6077 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG341200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGTACCCCTCATTTCCTTCCACACCTCCACAACACACCCTCTCCTACTAACCCCAACCTCAACCCCGTTCCTCCCCCGCCGCCCCAAATCCCACCTCCCCCGACGAACCCACTTCCCCATTTCCTCAATCTCCCAGAACCCAAATCAATTCACCCGCCAAAACCCACAACCCCAGCCCCAGCCCCCAAGAACCCAGTTCCCCGGTGGCTTCAGGCGCCCAGAAATCAAGGTCCCCAACATCGTCCTCCAATTGGACCCTGAAGACGTCTTGGCTTCCGACGACGTGTTGGGTTTGGTCGATAAAGCTGTGTCCAAATGGGTTGGGATTCTTGTCCTCGACGGCCGTGAAGCTAACGGCGGCCTCCTCTATGAGGCCGCCTGTAAGTTGAAGTCGGTGGTCGGAGACCGGGCTTACTTGTTGATCTCTGAGCGCGTGGATATCGCAGCCGCAGCTAATGCGAGTGGGATTCTGCTCTCCGACCAAGGTCTTCCGACCATTGTAGCAAGAAGCACAATGATGGCTTCAAAATCTGATTCGGTAGTGCTTCCTTTGGTGGCTAGGAATGTGCAGGACGCAGATGCTGCCGTAAAAGCCTCCAGCTCCGAAGGAGCTGATTTTCTTATATATAGTGTTGATGGAGAGGAAAATGTTCCTGCTGTATTGAACTCTCTGTTTAAAAATGTGAAGATACCGATATTTGTCACGATCAGTTCATACGGCAGGTTATATACAGAGGTGCCAGGACTACTCAGATCTGGGGCTAGTGGATTAGTTACATCTTTGAAGGATTTCAGGATGCTTGATGACGATGCGTTGAGCAAGTTGTTTGATATTGTGTACATGGTGAATAGTAAAAGACAGGATGAAGTTGAGAGCTTCAGTAAGACCAAATTTTCGGGTGTGCGTAGTGGTGCCAAGGACACTAAAACTGTTGCTGGGTTTCTTAAACTGGAGGATAGAGAAAAGCAGTTCATCGAAACAGAGAGATCGGTGTTGCTCAAAGCAATAAGTGTTATCCAGAGAGCTGCCCCACTGATGGAGGAGGTGTCACTTCTCATTGATGCAGTTTCTCAAATTGATGAGCCATTTTTACTGGTTATAGTGGGCGAATTTAACTCTGGTAAATCAACTGTTATTAATGCACTTCTTGGAAGAAGATATCTTGAAGAGGGGGTTGTTCCCACAACTAATGAGATCACCTTCTTACGCTATTCTGAGATGGATGGTGAGGAACAACATTGTGAAAGGCATCCAGATGGTCAATATATATGCTACCTTCCAGCTCCCATTCTTAAAGAAATGAACGTTGTTGATACACCTGGAACTAATGTGATTTTGCAAAGGCAACAACGCCTTACCGAGGAATTTGTACCCCGTGCTGATTTGCTTCTTTTTGTTATCTCTGCCGATCGCCCTTTAACTGAAAGCGAGGTTGCTTTCCTTCGGTACACTCAGCAGTGGAAGAAGAAAGTAGTGTTTGTCTTGAACAAATCTGATATCTATCGGAATGCTCATGAGCTTGAGGAAGGTATGTCATTCATCAAGGAGAATACCCAGAAATTGCTGAATACTGAACATGTGACATTATTTCCCATCTCTGCACGAACTGCTCTTGAGGCAAAACTGTCATCTTCTGCTTTTGGGGAAGATTATGCAAAACTATCGGTATCTGATTCTCAGTGGAAAAGCAATAACTTCTATGAGCTTGAGAACTTCTTGTATAGTTTTTTAGATGGGTCAACAAGTACAGGAATGGAAAGAATGAAACTCAAACTAGAAACACCCATTGCAATTGCAGAGAAACTACTTTCTGGTTGTGAAACTCTTGTCACACAAGACTGCCGATATGCCAAGCAGGACTTGGCCTCAATAAATGATATAGTTGGCAGCGTAAAGAACTATGCAGTGAAGATGGAAAATGAGAGCATTGCTTGGAGAAGAAGAATCCTATCTGTGATTGATACTACAAAGTCACGTGTTGTGGAGCTCATAGAAGCTACTCTGCTTATATCAAATCTTGATCTTGTTGCTTTCTATGTTTTCAAAGGGGGAAAATCTGCTACCATTCCAGCCACCTCAAGGTTTCAGAATGACATTATAGGACCTGCACTTTTAGATGTGCAAGTAAGTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009668 GO:0009707 GO:0009791 GO:0009941 GO:0009987 GO:0010027 GO:0010228 GO:0010363 GO:0010941 GO:0016020 GO:0016043 GO:0019867 GO:0022414 GO:0031090 GO:0031347 GO:0031348 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0034051 GO:0042170 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045824 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0060548 GO:0061024 GO:0061458 GO:0065007 GO:0071840 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900424 GO:1900425 GO:1902477 GO:1902478

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N TMP-TENI

Protein Analysis

712

Amino Acids

79.03

Weight (kDa)

5.67

Isoelectric Point (pI)

38.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	366 - 412	7.4e-11	Dynamin family
GTP_EFTU	PF00009	366 - 541	4.5e-07	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	367 - 498	5.2e-14	50S ribosome-binding GTPase
Dynamin_N	PF00350	422 - 498	1.8e-09	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03160 AT1G03160 AT1G03160 AT1G03160
fragaria_vesca	FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600
malus_domestica	MD00G1063200.v1.1 MD11G1286100.v1.1 MD11G1311300.v1.1 MD11G1311400.v1.1 MD11G1311600.v1.1 MD11G1311700.v1.1 MD11G1312200.v1.1
prunus_persica	Prupe.8G241300_v2.0.a1
pyrus_communis	pycom11g25360
rosa_chinensis	RchiOBHm_Chr6g0291071
rosa_laevigata	RLG00000012149
rosa_multiflora	Rmu_co8364727.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176400
rosa_rugosa	Rorug06G0217300
rosa_samantha	Rh6AG327500 Rh6BG335000 Rh6CG341200 Rh6DG328500
rosa_wichuraiana	Rw6G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	270
Acc36I	ACCTGC	2 cut(s)	714, 2116
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	4 cut(s)	4, 216, 739, 914
AccII	CGCG	1 cut(s)	435
AciI	CCGC	6 cut(s)	79, 82, 157, 360, 378, 450
AclI	AACGTT	1 cut(s)	1308
AcoI	YGGCCR	1 cut(s)	343
AcsI	RAATTY	3 cut(s)	893, 1112, 1367
AcuI	CTGAAG	3 cut(s)	196, 282, 865
AcvI	CACGTG	1 cut(s)	1979
AcyI	GRCGYC	2 cut(s)	217, 267
AfaI	GTAC	5 cut(s)	6, 842, 1374, 1451, 1750
AfiI	CCNNNNNNNGG	5 cut(s)	253, 373, 1039, 1363, 2082
AflIII	ACRYGT	3 cut(s)	285, 1579, 1978
AgsI	TTSAA	7 cut(s)	391, 528, 667, 787, 1169, 1489, 2047
AjiI	CACGTC	1 cut(s)	286
AjnI	CCWGG	2 cut(s)	742, 1321
Alw21I	GWGCWC	1 cut(s)	1992
Alw26I	GTCTC	1 cut(s)	399
AlwNI	CAGNNNCTG	1 cut(s)	584
AoxI	GGCC	4 cut(s)	343, 361, 375, 1866
ApeKI	GCWGC	5 cut(s)	446, 452, 584, 1028, 1890
ApoI	RAATTY	3 cut(s)	893, 1112, 1367
ArsI	GACNNNNNNTTYG	2 cut(s)	880, 912
AseI	ATTAAT	1 cut(s)	1140
Asp700I	GAANNNNTTC	2 cut(s)	651, 791
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	2 cut(s)	219, 435
AspS9I	GGNCC	3 cut(s)	232, 256, 2105
AsuC2I	CCSGG	2 cut(s)	204, 410
AsuHPI	GGTGA	4 cut(s)	145, 859, 1192, 1241
AvaII	GGWCC	3 cut(s)	232, 256, 2105
BanI	GGYRCC	4 cut(s)	4, 216, 739, 914
BanII	GRGCYC	1 cut(s)	1992
BbrPI	CACGTG	1 cut(s)	1979
BbsI	GAAGAC	2 cut(s)	270, 482
Bbv12I	GWGCWC	1 cut(s)	1992
BbvI	GCAGC	5 cut(s)	458, 464, 571, 1015, 1902
BccI	CCATC	9 cut(s)	514, 632, 1033, 1216, 1220, 1253, 1604, 1730, 1909
BceAI	ACGGC	5 cut(s)	330, 358, 373, 572, 736
BcgI	CGANNNNNNTGC	2 cut(s)	1647, 1681
BciT130I	CCWGG	2 cut(s)	744, 1323
BcnI	CCSGG	2 cut(s)	204, 410
BcoDI	GTCTC	1 cut(s)	399
BfaI	CTAG	3 cut(s)	561, 765, 1778
BfoI	RGCGCY	1 cut(s)	220
BfuAI	ACCTGC	2 cut(s)	714, 2116
BglII	AGATCT	1 cut(s)	755
BisI	GCNGC	9 cut(s)	82, 361, 378, 447, 450, 453, 585, 1029, 1891
BlsI	GCNGC	9 cut(s)	83, 362, 379, 448, 451, 454, 586, 1030, 1892
Bme1390I	CCNGG	4 cut(s)	204, 410, 744, 1323
Bme18I	GGWCC	3 cut(s)	232, 256, 2105
BmgBI	CACGTC	1 cut(s)	286
BmgT120I	GGNCC	3 cut(s)	232, 256, 2105
BmiI	GGNNCC	6 cut(s)	6, 218, 234, 258, 741, 916
BmrFI	CCNGG	4 cut(s)	204, 410, 744, 1323
BmrI	ACTGGG	1 cut(s)	190
BmsI	GCATC	5 cut(s)	571, 789, 802, 1054, 1261
BmuI	ACTGGG	1 cut(s)	190
BoxI	GACNNNNGTC	1 cut(s)	486
BpiI	GAAGAC	2 cut(s)	270, 482
BpmI	CTGGAG	2 cut(s)	583, 974
BpuEI	CTTGAG	4 cut(s)	1544, 1637, 1730, 2065
BpuMI	CCSGG	2 cut(s)	204, 410
BsaAI	YACGTR	1 cut(s)	1979
BsaBI	GATNNNNATC	1 cut(s)	1503
BsaHI	GRCGYC	2 cut(s)	217, 267
BsaI	GGTCTC	1 cut(s)	399
BsaJI	CCNNGG	4 cut(s)	202, 484, 918, 1362
BsaXI	ACNNNNNCTCC	4 cut(s)	27, 57, 1034, 1064
Bsc4I	CCNNNNNNNGG	5 cut(s)	253, 373, 1039, 1363, 2082
Bse1I	ACTGG	3 cut(s)	196, 957, 1101
Bse3DI	GCAATG	2 cut(s)	1788, 1929
Bse8I	GATNNNNATC	1 cut(s)	1503
BseBI	CCWGG	2 cut(s)	744, 1323
BseDI	CCNNGG	4 cut(s)	202, 484, 918, 1362
BseGI	GGATG	4 cut(s)	804, 871, 1231, 1252
BseJI	GATNNNNATC	1 cut(s)	1503
BseLI	CCNNNNNNNGG	5 cut(s)	253, 373, 1039, 1363, 2082
BseMI	GCAATG	2 cut(s)	1788, 1929
BseMII	CTCAG	5 cut(s)	420, 766, 1209, 1469, 1694
BseNI	ACTGG	3 cut(s)	196, 957, 1101
BseRI	GAGGAG	2 cut(s)	356, 1058
BseX3I	CGGCCG	1 cut(s)	343
BseXI	GCAGC	5 cut(s)	458, 464, 571, 1015, 1902
BseYI	CCCAGC	3 cut(s)	174, 180, 938
BsgI	GTGCAG	3 cut(s)	590, 1587, 2094
Bsh1236I	CGCG	1 cut(s)	435
Bsh1285I	CGRYCG	2 cut(s)	346, 1414
BshFI	GGCC	4 cut(s)	345, 363, 377, 1868
BshNI	GGYRCC	4 cut(s)	4, 216, 739, 914
BsiEI	CGRYCG	2 cut(s)	346, 1414
BsiHKAI	GWGCWC	1 cut(s)	1992
BsiSI	CCGG	2 cut(s)	204, 409
BslFI	GGGAC	1 cut(s)	218
BslI	CCNNNNNNNGG	5 cut(s)	253, 373, 1039, 1363, 2082
BsmAI	GTCTC	1 cut(s)	399
BsmFI	GGGAC	1 cut(s)	218
BsmI	GAATGC	1 cut(s)	1516
BsnI	GGCC	4 cut(s)	345, 363, 377, 1868
Bso31I	GGTCTC	1 cut(s)	399
Bsp1286I	GDGCHC	1 cut(s)	1992
Bsp1407I	TGTACA	1 cut(s)	840
Bsp143I	GATC	7 cut(s)	423, 708, 755, 989, 1197, 1411, 2023
BspACI	CCGC	6 cut(s)	79, 82, 157, 360, 378, 450
BspANI	GGCC	4 cut(s)	345, 363, 377, 1868
BspCNI	CTCAG	5 cut(s)	421, 765, 1210, 1468, 1693
BspFNI	CGCG	1 cut(s)	435
BspHI	TCATGA	1 cut(s)	1516
BspLI	GGNNCC	6 cut(s)	6, 218, 234, 258, 741, 916
BspMI	ACCTGC	2 cut(s)	714, 2116
BspT107I	GGYRCC	4 cut(s)	4, 216, 739, 914
BspTNI	GGTCTC	1 cut(s)	399
BsrDI	GCAATG	2 cut(s)	1788, 1929
BsrGI	TGTACA	1 cut(s)	840
BsrI	ACTGG	3 cut(s)	196, 957, 1101
BssECI	CCNNGG	4 cut(s)	202, 484, 918, 1362
BssMI	GATC	7 cut(s)	423, 708, 755, 989, 1197, 1411, 2023
BssNI	GRCGYC	2 cut(s)	217, 267
BssT1I	CCWWGG	2 cut(s)	484, 918
Bst2UI	CCWGG	2 cut(s)	744, 1323
Bst4CI	ACNGT	3 cut(s)	934, 1135, 1629
Bst6I	CTCTTC	1 cut(s)	1164
BstACI	GRCGYC	2 cut(s)	217, 267
BstAPI	GCANNNNNTGC	3 cut(s)	458, 584, 1610
BstAUI	TGTACA	1 cut(s)	840
BstBAI	YACGTR	1 cut(s)	1979
BstDEI	CTNAG	5 cut(s)	429, 752, 1218, 1455, 1680
BstENI	CCTNNNNNAGG	2 cut(s)	371, 1361
BstF5I	GGATG	4 cut(s)	804, 871, 1231, 1252
BstFNI	CGCG	1 cut(s)	435
BstH2I	RGCGCY	1 cut(s)	220
BstHHI	GCGC	2 cut(s)	219, 435
BstKTI	GATC	7 cut(s)	426, 711, 758, 992, 1200, 1414, 2026
BstMAI	GTCTC	1 cut(s)	399
BstMBI	GATC	7 cut(s)	423, 708, 755, 989, 1197, 1411, 2023
BstMCI	CGRYCG	2 cut(s)	346, 1414
BstMWI	GCNNNNNNNGC	7 cut(s)	216, 452, 458, 584, 593, 1610, 1619
BstNI	CCWGG	2 cut(s)	744, 1323
BstNSI	RCATGY	1 cut(s)	1583
BstPAI	GACNNNNGTC	1 cut(s)	486
BstSCI	CCNGG	4 cut(s)	202, 408, 742, 1321
BstUI	CGCG	1 cut(s)	435
BstV1I	GCAGC	5 cut(s)	458, 464, 571, 1015, 1902
BstV2I	GAAGAC	2 cut(s)	270, 482
BstX2I	RGATCY	1 cut(s)	755
BstYI	RGATCY	1 cut(s)	755
BstZI	CGGCCG	1 cut(s)	343
BsuRI	GGCC	4 cut(s)	345, 363, 377, 1868
BtrI	CACGTC	1 cut(s)	286
BtsCI	GGATG	4 cut(s)	804, 871, 1231, 1252
BtsI	GCAGTG	2 cut(s)	1466, 1914
BtsIMutI	CAGTG	4 cut(s)	1034, 1466, 1688, 1914
BveI	ACCTGC	2 cut(s)	714, 2116
CaiI	CAGNNNCTG	1 cut(s)	584
CciI	TCATGA	1 cut(s)	1516
CfoI	GCGC	2 cut(s)	219, 435
Cfr13I	GGNCC	3 cut(s)	232, 256, 2105
CseI	GACGC	1 cut(s)	584
Csp6I	GTAC	5 cut(s)	5, 841, 1373, 1450, 1749
CviAII	CATG	3 cut(s)	844, 1517, 1580
CviQI	GTAC	5 cut(s)	5, 841, 1373, 1450, 1749
DdeI	CTNAG	5 cut(s)	429, 752, 1218, 1455, 1680
DinI	GGCGCC	1 cut(s)	218
DpnI	GATC	7 cut(s)	425, 710, 757, 991, 1199, 1413, 2025
DpnII	GATC	7 cut(s)	423, 708, 755, 989, 1197, 1411, 2023
DraI	TTTAAA	1 cut(s)	679
EaeI	YGGCCR	1 cut(s)	343
EagI	CGGCCG	1 cut(s)	343
Eam1104I	CTCTTC	1 cut(s)	1164
EarI	CTCTTC	1 cut(s)	1164
Ecl136II	GAGCTC	1 cut(s)	1990
EclXI	CGGCCG	1 cut(s)	343
Eco130I	CCWWGG	2 cut(s)	484, 918
Eco24I	GRGCYC	1 cut(s)	1992
Eco31I	GGTCTC	1 cut(s)	399
Eco32I	GATATC	3 cut(s)	442, 1163, 1501
Eco47I	GGWCC	3 cut(s)	232, 256, 2105
Eco52I	CGGCCG	1 cut(s)	343
Eco53kI	GAGCTC	1 cut(s)	1990
Eco57I	CTGAAG	3 cut(s)	196, 282, 865
Eco72I	CACGTG	1 cut(s)	1979
EcoICRI	GAGCTC	1 cut(s)	1990
EcoNI	CCTNNNNNAGG	2 cut(s)	371, 1361
EcoO109I	RGGNCCY	2 cut(s)	232, 2105
EcoRII	CCWGG	2 cut(s)	742, 1321
EcoRV	GATATC	3 cut(s)	442, 1163, 1501
EcoT14I	CCWWGG	2 cut(s)	484, 918
EcoT38I	GRGCYC	1 cut(s)	1992
EgeI	GGCGCC	1 cut(s)	218
EheI	GGCGCC	1 cut(s)	218
ErhI	CCWWGG	2 cut(s)	484, 918
FaeI	CATG	3 cut(s)	847, 1520, 1583
FalI	AAGNNNNNCTT	2 cut(s)	1847, 1879
FaqI	GGGAC	1 cut(s)	218
FatI	CATG	3 cut(s)	843, 1516, 1579
FauI	CCCGC	2 cut(s)	86, 164
Fnu4HI	GCNGC	9 cut(s)	82, 361, 378, 447, 450, 453, 585, 1029, 1891
FokI	GGATG	4 cut(s)	811, 878, 1238, 1239
FriOI	GRGCYC	1 cut(s)	1992
Fsp4HI	GCNGC	9 cut(s)	82, 361, 378, 447, 450, 453, 585, 1029, 1891
FspBI	CTAG	3 cut(s)	561, 765, 1778
GlaI	GCGC	2 cut(s)	218, 434
GluI	GCNGC	9 cut(s)	82, 361, 378, 447, 450, 453, 585, 1029, 1891
GsaI	CCCAGC	3 cut(s)	178, 184, 942
GsuI	CTGGAG	2 cut(s)	583, 974
HaeII	RGCGCY	1 cut(s)	220
HaeIII	GGCC	4 cut(s)	345, 363, 377, 1868
HapII	CCGG	2 cut(s)	204, 409
HgaI	GACGC	1 cut(s)	584
HhaI	GCGC	2 cut(s)	219, 435
Hin1I	GRCGYC	2 cut(s)	217, 267
Hin1II	CATG	3 cut(s)	847, 1520, 1583
Hin6I	GCGC	2 cut(s)	217, 433
HinP1I	GCGC	2 cut(s)	217, 433
HincII	GTYRAC	1 cut(s)	1743
HindII	GTYRAC	1 cut(s)	1743
HinfI	GANTC	5 cut(s)	328, 469, 536, 1676, 1947
HpaII	CCGG	2 cut(s)	204, 409
HphI	GGTGA	4 cut(s)	145, 859, 1192, 1241
Hpy166II	GTNNAC	3 cut(s)	841, 1452, 1743
Hpy188III	TCNNGA	9 cut(s)	706, 796, 1021, 1166, 1256, 1486, 1517, 1616, 2021
Hpy8I	GTNNAC	3 cut(s)	841, 1452, 1743
Hpy99I	CGWCG	4 cut(s)	108, 284, 287, 344
HpyAV	CCTTC	7 cut(s)	28, 602, 781, 1213, 1289, 1454, 1523
HpyCH4III	ACNGT	3 cut(s)	934, 1135, 1629
HpyCH4IV	ACGT	4 cut(s)	267, 285, 1308, 1978
HpyF10VI	GCNNNNNNNGC	7 cut(s)	216, 452, 458, 584, 593, 1610, 1619
HpyF3I	CTNAG	5 cut(s)	429, 752, 1218, 1455, 1680
HpySE526I	ACGT	4 cut(s)	267, 285, 1308, 1978
Hsp92I	GRCGYC	2 cut(s)	217, 267
Hsp92II	CATG	3 cut(s)	847, 1520, 1583
HspAI	GCGC	2 cut(s)	217, 433
KasI	GGCGCC	1 cut(s)	216
KpnI	GGTACC	1 cut(s)	8
Kzo9I	GATC	7 cut(s)	423, 708, 755, 989, 1197, 1411, 2023
LmnI	GCTCC	4 cut(s)	608, 611, 1291, 1987
Lsp1109I	GCAGC	5 cut(s)	458, 464, 571, 1015, 1902
LweI	GCATC	5 cut(s)	571, 789, 802, 1054, 1261
MaeI	CTAG	3 cut(s)	561, 765, 1778
MaeII	ACGT	4 cut(s)	267, 285, 1308, 1978
MaeIII	GTNAC	6 cut(s)	703, 775, 1050, 1582, 1831, 1974
MalI	GATC	7 cut(s)	425, 710, 757, 991, 1199, 1413, 2025
MboI	GATC	7 cut(s)	423, 708, 755, 989, 1197, 1411, 2023
MfeI	CAATTG	2 cut(s)	251, 1794
MflI	RGATCY	1 cut(s)	755
MhlI	GDGCHC	1 cut(s)	1992
MluCI	AATT	8 cut(s)	149, 251, 893, 1077, 1112, 1367, 1562, 1794
Mly113I	GGCGCC	1 cut(s)	217
MmeI	TCCRAC	4 cut(s)	303, 382, 504, 518
MroXI	GAANNNNTTC	2 cut(s)	651, 791
MseI	TTAA	6 cut(s)	678, 948, 1116, 1140, 1296, 1421
MslI	CAYNNNNRTG	2 cut(s)	518, 1257
MspI	CCGG	2 cut(s)	204, 409
MspR9I	CCNGG	4 cut(s)	204, 410, 744, 1323
MunI	CAATTG	2 cut(s)	251, 1794
Mva1269I	GAATGC	1 cut(s)	1516
MvaI	CCWGG	2 cut(s)	744, 1323
MvnI	CGCG	1 cut(s)	435
MwoI	GCNNNNNNNGC	7 cut(s)	216, 452, 458, 584, 593, 1610, 1619
NarI	GGCGCC	1 cut(s)	217
NciI	CCSGG	2 cut(s)	204, 410
NdeII	GATC	7 cut(s)	423, 708, 755, 989, 1197, 1411, 2023
NlaIII	CATG	3 cut(s)	847, 1520, 1583
NlaIV	GGNNCC	6 cut(s)	6, 218, 234, 258, 741, 916
NmuCI	GTSAC	5 cut(s)	703, 1050, 1582, 1831, 1974
NspI	RCATGY	1 cut(s)	1583
PagI	TCATGA	1 cut(s)	1516
PciI	ACATGT	1 cut(s)	1579
PctI	GAATGC	1 cut(s)	1516
PdmI	GAANNNNTTC	2 cut(s)	651, 791
PfeI	GAWTC	5 cut(s)	328, 469, 536, 1676, 1947
PkrI	GCNGC	9 cut(s)	83, 362, 379, 448, 451, 454, 586, 1030, 1892
Ple19I	CGATCG	1 cut(s)	1414
PluTI	GGCGCC	1 cut(s)	220
PmaCI	CACGTG	1 cut(s)	1979
PmlI	CACGTG	1 cut(s)	1979
Ppu21I	YACGTR	1 cut(s)	1979
PpuMI	RGGWCCY	2 cut(s)	232, 2105
PscI	ACATGT	1 cut(s)	1579
PshAI	GACNNNNGTC	1 cut(s)	486
PshBI	ATTAAT	1 cut(s)	1140
Psp124BI	GAGCTC	1 cut(s)	1992
Psp1406I	AACGTT	1 cut(s)	1308
Psp5II	RGGWCCY	2 cut(s)	232, 2105
Psp6I	CCWGG	2 cut(s)	742, 1321
PspCI	CACGTG	1 cut(s)	1979
PspFI	CCCAGC	3 cut(s)	174, 180, 938
PspGI	CCWGG	2 cut(s)	742, 1321
PspN4I	GGNNCC	6 cut(s)	6, 218, 234, 258, 741, 916
PspPI	GGNCC	3 cut(s)	232, 256, 2105
PspPPI	RGGWCCY	2 cut(s)	232, 2105
PstNI	CAGNNNCTG	1 cut(s)	584
PsuI	RGATCY	1 cut(s)	755
PvuI	CGATCG	1 cut(s)	1414
RsaI	GTAC	5 cut(s)	6, 842, 1374, 1451, 1750
RsaNI	GTAC	5 cut(s)	5, 841, 1373, 1450, 1749
RseI	CAYNNNNRTG	2 cut(s)	518, 1257
SacI	GAGCTC	1 cut(s)	1992
SaqAI	TTAA	6 cut(s)	678, 948, 1116, 1140, 1296, 1421
SatI	GCNGC	9 cut(s)	82, 361, 378, 447, 450, 453, 585, 1029, 1891
Sau3AI	GATC	7 cut(s)	423, 708, 755, 989, 1197, 1411, 2023
Sau96I	GGNCC	3 cut(s)	232, 256, 2105
ScrFI	CCNGG	4 cut(s)	204, 410, 744, 1323
SduI	GDGCHC	1 cut(s)	1992
SfaNI	GCATC	5 cut(s)	571, 789, 802, 1054, 1261
SfoI	GGCGCC	1 cut(s)	218
SinI	GGWCC	3 cut(s)	232, 256, 2105
SmiMI	CAYNNNNRTG	2 cut(s)	518, 1257
SmlI	CTYRAG	4 cut(s)	1523, 1616, 1709, 2080
SmoI	CTYRAG	4 cut(s)	1523, 1616, 1709, 2080
Sse9I	AATT	8 cut(s)	149, 251, 893, 1077, 1112, 1367, 1562, 1794
SsiI	CCGC	6 cut(s)	79, 82, 157, 360, 378, 450
SspDI	GGCGCC	1 cut(s)	216
SspMI	CTAG	3 cut(s)	561, 765, 1778
SstI	GAGCTC	1 cut(s)	1992
StyD4I	CCNGG	4 cut(s)	202, 408, 742, 1321
StyI	CCWWGG	2 cut(s)	484, 918
TaaI	ACNGT	3 cut(s)	934, 1135, 1629
TaiI	ACGT	4 cut(s)	270, 288, 1311, 1981
TaqI	TCGA	3 cut(s)	300, 339, 978
TasI	AATT	8 cut(s)	149, 251, 893, 1077, 1112, 1367, 1562, 1794
TatI	WGTACW	2 cut(s)	840, 1748
TauI	GCSGC	4 cut(s)	84, 363, 380, 452
TfiI	GAWTC	5 cut(s)	328, 469, 536, 1676, 1947
Tru1I	TTAA	6 cut(s)	678, 948, 1116, 1140, 1296, 1421
Tru9I	TTAA	6 cut(s)	678, 948, 1116, 1140, 1296, 1421
TscAI	CASTG	4 cut(s)	1041, 1466, 1688, 1914
TseFI	GTSAC	5 cut(s)	703, 1050, 1582, 1831, 1974
TseI	GCWGC	5 cut(s)	446, 452, 584, 1028, 1890
Tsp45I	GTSAC	5 cut(s)	703, 1050, 1582, 1831, 1974
TspDTI	ATGAA	7 cut(s)	705, 882, 964, 1319, 1531, 1781, 2124
TspRI	CASTG	4 cut(s)	1041, 1466, 1688, 1914
VpaK11BI	GGWCC	3 cut(s)	232, 256, 2105
VspI	ATTAAT	1 cut(s)	1140
XagI	CCTNNNNNAGG	2 cut(s)	371, 1361
XapI	RAATTY	3 cut(s)	893, 1112, 1367
XceI	RCATGY	1 cut(s)	1583
XcmI	CCANNNNNNNNNTGG	2 cut(s)	203, 1861
XmnI	GAANNNNTTC	2 cut(s)	651, 791
XspI	CTAG	3 cut(s)	561, 765, 1778
ZraI	GACGTC	1 cut(s)	268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.