Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0005859

Physical Location & Seq

Genomic Coordinates Forward (+)

56830198 .. 56836270

Gene Structure 6073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG335000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGTACCCCTCATTTCATTCCACACCTCCACAACACACCCTCTCCTACTACTAACCCCAACCCCAACCCCAACCCCGTTCCTCCCCCGCCCCAAATCCCACCTCCCCCGACGAACCCACTTCCCCATTTCCTCAATCTCCCAGAACCCAAATCAATTCACCCGCCAAAACCCACAACCCCAACCCCAGCCCCCAAGAACCCAGTTCCCCGGTGGCTTCAGGCGCCCAGAAATCAAGGTCCCCAACATCGTCCTCCAATTGGACCCTGAAGACGTCTTGGCTTCCGACGACGTGTTGGGTTTGGTCGATAAAGCTGTGTCCAAATGGGTTGGGATTCTTGTCCTCGACGGCCGTGAAGCTAACGGCGGCCGCCTCTATGAGGCCGCCTGTAAGTTGAAGTCGGTGGTCGGAGACCGGGCTTACTTGTTGATCTCTGAGCGCGTGGATATCGCAGCCGCAGCTAATGCGAGTGGGATTCTGCTCTCCGATCAAGGTCTTCCGACCATTGTAGCAAGAAGCACAATGATGGCCTCAAAATCTGATTCGGTAGTGCTTCCTTTGGTGGCTAGGAATGTGCAGGATGCAGATGCTGCAGTAAAAGCCTCCAGCTCCGAAGGAGCTGATTTTCTTATATATAGTGTTGATGGAGAGGAAAATGTTCCTGCTGTATTGAACTCTCTGTTTAAAAATGTGAAGATACCGATATTTGTCACGATCAGTTCATACAGCAGGTTATATACAGAGGTGCCTGGACTACTCAGATCTGGGGCTAGTGGATTAGTTACATCTTTGAAGGATTTCAGGATGCTTGATGACGATGCGTTGAGCAAGTTGTTTGATATTGTGTACATGGCGAATAGTAAAAGACAGGATGAAGTTGAAAGCTTTAGTAAGTTCAAATTTTCAGGTGTGCGTAGTGGTGCCAAGGACACTAAAACTGTTGCTGGGTTTCTTAAACTGGAGGATAGAGAAAAGCAGTTCATCGAAACAGAGAGATTGGTGTTGCTCAAAGCAATAAGTGTTATCCAGAGAGCTGCCCCACTGATGGAGGAGGTTTCACTTCTCATTGATGCAGTTTCTCAAATTGATGAGCCATTTTTACTGGTTATAGTGGGCGAATTTAACTCTGGTAAATCAACTGTTATTAATGCACTTCTTGGAAGAAGATATCTTAAAGAGGGGGTTGTTCCCACAACTAATGAGATCACCTTCTTACGCTATTCTGAGATGGATGGTGAGGAACAACATTGTGAAAGGCATCCAGATGGTCAATATATATGCTACCTTCCAGCTCCCATTCTTAAAGAAATGAACGTTGTTGATACACCTGGAACTAATGTGATTTTGCAAAGGCAACAACGCCTTACCGAGGAATTTGTACCCCGTGCTGATTTGCTTCTTTTTGTTATCTCTGCCGATCGCCCTTTAACTGAAAGCGAGGTTGCTTTCCTTCGGTACACTCAGCAGTGGAAGAAGAAAGTAGTATTTGTCTTGAACAAATCTGATATCTATCGGAATGCTCATGAGCTTGAGGAAGGTATGTCATTCATCAAGGAGAATACCCAGAAATTGCTGAATACTGAACATGTGACACTATTTCCCATCTCTGCACGAACTGCTCTTGAAGCAAAACTGTCATCTTCTGCTTTTGGGGAAGATTACGCAAAACTATCGGTATCTGATTCTCAGTGGAAAAGCAATAACTTCTATGAGCTTGAGAACTTCTTGTATAGTTTTTTAGATGGGTCAACAAGTACAGGAATGGAAAGAATGAAACTCAAACTAGAAACACCCATTGCAATTGCAGAGAAACTACTTTCTTCTTGTGAAACTCTTGTCACACAAGACTGCCGATATGCCAAGCAGGACTTGGCCTCAATAAATGATATAGTTGGCAGCGTAAAGAACTATGCAGTGAAGATGGAAAATGAGAGCATTGCTTGGAGAAGAAGAATCCTATCTGTGATTGATACTACAAAGTCACGTGTTGTGGAGCTCATAGAAGCTACTCTGCTTATATCAAATCTTGATCTTGTTGCTTTCTATGTTTTCAAAGGGGGAAAATCTGCTACCATTCCAGCCACCTCAAGGGTTCAGAATGACATTATAGGACCTGCACTTTCAGATGTGCAAGTAAGTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007275 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009657 GO:0009668 GO:0009707 GO:0009791 GO:0009941 GO:0009987 GO:0010027 GO:0010228 GO:0010363 GO:0010941 GO:0016020 GO:0016043 GO:0019867 GO:0022414 GO:0031090 GO:0031347 GO:0031348 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0034051 GO:0042170 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045824 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050776 GO:0050777 GO:0050789 GO:0050794 GO:0060548 GO:0061024 GO:0061458 GO:0065007 GO:0071840 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900424 GO:1900425 GO:1902477 GO:1902478

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N TMP-TENI

Protein Analysis

714

Amino Acids

79.26

Weight (kDa)

5.84

Isoelectric Point (pI)

37.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	368 - 414	6.3e-11	Dynamin family
GTP_EFTU	PF00009	368 - 544	3.3e-07	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	369 - 500	4.9e-14	50S ribosome-binding GTPase
Dynamin_N	PF00350	424 - 500	1.8e-09	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03160 AT1G03160 AT1G03160 AT1G03160
fragaria_vesca	FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600 FvH4_2g23600
malus_domestica	MD00G1063200.v1.1 MD11G1286100.v1.1 MD11G1311300.v1.1 MD11G1311400.v1.1 MD11G1311600.v1.1 MD11G1311700.v1.1 MD11G1312200.v1.1
prunus_persica	Prupe.8G241300_v2.0.a1
pyrus_communis	pycom11g25360
rosa_chinensis	RchiOBHm_Chr6g0291071
rosa_laevigata	RLG00000012149
rosa_multiflora	Rmu_co8364727.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176400
rosa_rugosa	Rorug06G0217300
rosa_samantha	Rh6AG327500 Rh6BG335000 Rh6CG341200 Rh6DG328500
rosa_wichuraiana	Rw6G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	276
Acc36I	ACCTGC	2 cut(s)	720, 2122
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	4 cut(s)	4, 222, 745, 920
AccII	CGCG	1 cut(s)	441
AciI	CCGC	6 cut(s)	88, 163, 366, 370, 384, 456
AclI	AACGTT	1 cut(s)	1314
AcoI	YGGCCR	2 cut(s)	349, 367
AcsI	RAATTY	3 cut(s)	899, 1118, 1373
AcuI	CTGAAG	2 cut(s)	202, 288
AcvI	CACGTG	1 cut(s)	1985
AcyI	GRCGYC	2 cut(s)	223, 273
AfaI	GTAC	5 cut(s)	6, 848, 1380, 1457, 1756
AfiI	CCNNNNNNNGG	5 cut(s)	259, 379, 1045, 1369, 2088
AflIII	ACRYGT	3 cut(s)	291, 1585, 1984
AgsI	TTSAA	8 cut(s)	397, 673, 793, 881, 898, 1495, 1625, 2053
AjiI	CACGTC	1 cut(s)	292
AjnI	CCWGG	2 cut(s)	748, 1327
Alw21I	GWGCWC	1 cut(s)	1998
Alw26I	GTCTC	1 cut(s)	405
AlwNI	CAGNNNCTG	1 cut(s)	590
AoxI	GGCC	5 cut(s)	349, 367, 381, 528, 1872
ApeKI	GCWGC	5 cut(s)	452, 458, 590, 1034, 1896
ApoI	RAATTY	3 cut(s)	899, 1118, 1373
AseI	ATTAAT	1 cut(s)	1146
Asp700I	GAANNNNTTC	2 cut(s)	657, 797
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	2 cut(s)	225, 441
AspS9I	GGNCC	3 cut(s)	238, 262, 2111
AsuC2I	CCSGG	2 cut(s)	210, 416
AsuHPI	GGTGA	3 cut(s)	151, 1198, 1247
AvaII	GGWCC	3 cut(s)	238, 262, 2111
BanI	GGYRCC	4 cut(s)	4, 222, 745, 920
BanII	GRGCYC	1 cut(s)	1998
BbrPI	CACGTG	1 cut(s)	1985
BbsI	GAAGAC	2 cut(s)	276, 488
Bbv12I	GWGCWC	1 cut(s)	1998
BbvI	GCAGC	5 cut(s)	464, 470, 577, 1021, 1908
BccI	CCATC	9 cut(s)	520, 638, 1039, 1222, 1226, 1259, 1610, 1736, 1915
BceAI	ACGGC	3 cut(s)	336, 364, 379
BcgI	CGANNNNNNTGC	2 cut(s)	1653, 1687
BciT130I	CCWGG	2 cut(s)	750, 1329
BcnI	CCSGG	2 cut(s)	210, 416
BcoDI	GTCTC	1 cut(s)	405
BfaI	CTAG	3 cut(s)	567, 771, 1784
BfmI	CTRYAG	1 cut(s)	591
BfoI	RGCGCY	1 cut(s)	226
BfuAI	ACCTGC	2 cut(s)	720, 2122
BglII	AGATCT	1 cut(s)	761
BisI	GCNGC	9 cut(s)	367, 370, 384, 453, 456, 459, 591, 1035, 1897
BlsI	GCNGC	9 cut(s)	368, 371, 385, 454, 457, 460, 592, 1036, 1898
Bme1390I	CCNGG	4 cut(s)	210, 416, 750, 1329
Bme18I	GGWCC	3 cut(s)	238, 262, 2111
BmgBI	CACGTC	1 cut(s)	292
BmgT120I	GGNCC	3 cut(s)	238, 262, 2111
BmiI	GGNNCC	6 cut(s)	6, 224, 240, 264, 747, 922
BmrFI	CCNGG	4 cut(s)	210, 416, 750, 1329
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	6 cut(s)	571, 577, 795, 808, 1060, 1267
BmuI	ACTGGG	1 cut(s)	196
BpiI	GAAGAC	2 cut(s)	276, 488
BpmI	CTGGAG	2 cut(s)	589, 980
BpuEI	CTTGAG	3 cut(s)	1550, 1736, 2071
BpuMI	CCSGG	2 cut(s)	210, 416
BsaAI	YACGTR	1 cut(s)	1985
BsaBI	GATNNNNATC	1 cut(s)	1509
BsaHI	GRCGYC	2 cut(s)	223, 273
BsaI	GGTCTC	1 cut(s)	405
BsaJI	CCNNGG	3 cut(s)	208, 924, 1368
BsaXI	ACNNNNNCTCC	2 cut(s)	27, 57
Bsc4I	CCNNNNNNNGG	5 cut(s)	259, 379, 1045, 1369, 2088
Bse1I	ACTGG	3 cut(s)	202, 963, 1107
Bse3DI	GCAATG	2 cut(s)	1794, 1935
Bse8I	GATNNNNATC	1 cut(s)	1509
BseBI	CCWGG	2 cut(s)	750, 1329
BseDI	CCNNGG	3 cut(s)	208, 924, 1368
BseGI	GGATG	5 cut(s)	586, 810, 877, 1237, 1258
BseJI	GATNNNNATC	1 cut(s)	1509
BseLI	CCNNNNNNNGG	5 cut(s)	259, 379, 1045, 1369, 2088
BseMI	GCAATG	2 cut(s)	1794, 1935
BseMII	CTCAG	5 cut(s)	426, 772, 1215, 1475, 1700
BseNI	ACTGG	3 cut(s)	202, 963, 1107
BseRI	GAGGAG	1 cut(s)	1064
BseX3I	CGGCCG	2 cut(s)	349, 367
BseXI	GCAGC	5 cut(s)	464, 470, 577, 1021, 1908
BseYI	CCCAGC	2 cut(s)	186, 944
BsgI	GTGCAG	3 cut(s)	596, 1593, 2100
Bsh1236I	CGCG	1 cut(s)	441
Bsh1285I	CGRYCG	3 cut(s)	352, 370, 1420
BshFI	GGCC	5 cut(s)	351, 369, 383, 530, 1874
BshNI	GGYRCC	4 cut(s)	4, 222, 745, 920
BsiEI	CGRYCG	3 cut(s)	352, 370, 1420
BsiHKAI	GWGCWC	1 cut(s)	1998
BsiSI	CCGG	2 cut(s)	210, 415
BslFI	GGGAC	1 cut(s)	224
BslI	CCNNNNNNNGG	5 cut(s)	259, 379, 1045, 1369, 2088
BsmAI	GTCTC	1 cut(s)	405
BsmFI	GGGAC	1 cut(s)	224
BsmI	GAATGC	1 cut(s)	1522
BsnI	GGCC	5 cut(s)	351, 369, 383, 530, 1874
Bso31I	GGTCTC	1 cut(s)	405
Bsp1286I	GDGCHC	1 cut(s)	1998
Bsp1407I	TGTACA	1 cut(s)	846
Bsp143I	GATC	7 cut(s)	429, 487, 714, 761, 1203, 1417, 2029
BspACI	CCGC	6 cut(s)	88, 163, 366, 370, 384, 456
BspANI	GGCC	5 cut(s)	351, 369, 383, 530, 1874
BspCNI	CTCAG	5 cut(s)	427, 771, 1216, 1474, 1699
BspFNI	CGCG	1 cut(s)	441
BspHI	TCATGA	1 cut(s)	1522
BspLI	GGNNCC	6 cut(s)	6, 224, 240, 264, 747, 922
BspMAI	CTGCAG	1 cut(s)	595
BspMI	ACCTGC	2 cut(s)	720, 2122
BspT107I	GGYRCC	4 cut(s)	4, 222, 745, 920
BspTNI	GGTCTC	1 cut(s)	405
BsrDI	GCAATG	2 cut(s)	1794, 1935
BsrGI	TGTACA	1 cut(s)	846
BsrI	ACTGG	3 cut(s)	202, 963, 1107
BssECI	CCNNGG	3 cut(s)	208, 924, 1368
BssMI	GATC	7 cut(s)	429, 487, 714, 761, 1203, 1417, 2029
BssNI	GRCGYC	2 cut(s)	223, 273
BssT1I	CCWWGG	1 cut(s)	924
Bst2UI	CCWGG	2 cut(s)	750, 1329
Bst4CI	ACNGT	3 cut(s)	940, 1141, 1635
BstACI	GRCGYC	2 cut(s)	223, 273
BstAPI	GCANNNNNTGC	3 cut(s)	464, 590, 1616
BstAUI	TGTACA	1 cut(s)	846
BstBAI	YACGTR	1 cut(s)	1985
BstDEI	CTNAG	5 cut(s)	435, 758, 1224, 1461, 1686
BstENI	CCTNNNNNAGG	2 cut(s)	377, 1367
BstF5I	GGATG	5 cut(s)	586, 810, 877, 1237, 1258
BstFNI	CGCG	1 cut(s)	441
BstH2I	RGCGCY	1 cut(s)	226
BstHHI	GCGC	2 cut(s)	225, 441
BstKTI	GATC	7 cut(s)	432, 490, 717, 764, 1206, 1420, 2032
BstMAI	GTCTC	1 cut(s)	405
BstMBI	GATC	7 cut(s)	429, 487, 714, 761, 1203, 1417, 2029
BstMCI	CGRYCG	3 cut(s)	352, 370, 1420
BstMWI	GCNNNNNNNGC	7 cut(s)	222, 458, 464, 590, 599, 1616, 1625
BstNI	CCWGG	2 cut(s)	750, 1329
BstNSI	RCATGY	1 cut(s)	1589
BstSCI	CCNGG	4 cut(s)	208, 414, 748, 1327
BstSFI	CTRYAG	1 cut(s)	591
BstUI	CGCG	1 cut(s)	441
BstV1I	GCAGC	5 cut(s)	464, 470, 577, 1021, 1908
BstV2I	GAAGAC	2 cut(s)	276, 488
BstX2I	RGATCY	1 cut(s)	761
BstYI	RGATCY	1 cut(s)	761
BstZI	CGGCCG	2 cut(s)	349, 367
BsuRI	GGCC	5 cut(s)	351, 369, 383, 530, 1874
BtrI	CACGTC	1 cut(s)	292
BtsCI	GGATG	5 cut(s)	586, 810, 877, 1237, 1258
BtsI	GCAGTG	2 cut(s)	1472, 1920
BtsIMutI	CAGTG	4 cut(s)	1040, 1472, 1694, 1920
BveI	ACCTGC	2 cut(s)	720, 2122
CaiI	CAGNNNCTG	1 cut(s)	590
CciI	TCATGA	1 cut(s)	1522
CciNI	GCGGCCGC	1 cut(s)	367
CfoI	GCGC	2 cut(s)	225, 441
Cfr13I	GGNCC	3 cut(s)	238, 262, 2111
Csp6I	GTAC	5 cut(s)	5, 847, 1379, 1456, 1755
CviAII	CATG	3 cut(s)	850, 1523, 1586
CviQI	GTAC	5 cut(s)	5, 847, 1379, 1456, 1755
DdeI	CTNAG	5 cut(s)	435, 758, 1224, 1461, 1686
DinI	GGCGCC	1 cut(s)	224
DpnI	GATC	7 cut(s)	431, 489, 716, 763, 1205, 1419, 2031
DpnII	GATC	7 cut(s)	429, 487, 714, 761, 1203, 1417, 2029
DraI	TTTAAA	1 cut(s)	685
EaeI	YGGCCR	2 cut(s)	349, 367
EagI	CGGCCG	2 cut(s)	349, 367
Ecl136II	GAGCTC	1 cut(s)	1996
EclXI	CGGCCG	2 cut(s)	349, 367
Eco130I	CCWWGG	1 cut(s)	924
Eco24I	GRGCYC	1 cut(s)	1998
Eco31I	GGTCTC	1 cut(s)	405
Eco32I	GATATC	3 cut(s)	448, 1169, 1507
Eco47I	GGWCC	3 cut(s)	238, 262, 2111
Eco52I	CGGCCG	2 cut(s)	349, 367
Eco53kI	GAGCTC	1 cut(s)	1996
Eco57I	CTGAAG	2 cut(s)	202, 288
Eco72I	CACGTG	1 cut(s)	1985
EcoICRI	GAGCTC	1 cut(s)	1996
EcoNI	CCTNNNNNAGG	2 cut(s)	377, 1367
EcoO109I	RGGNCCY	2 cut(s)	238, 2111
EcoRII	CCWGG	2 cut(s)	748, 1327
EcoRV	GATATC	3 cut(s)	448, 1169, 1507
EcoT14I	CCWWGG	1 cut(s)	924
EcoT38I	GRGCYC	1 cut(s)	1998
EgeI	GGCGCC	1 cut(s)	224
EheI	GGCGCC	1 cut(s)	224
ErhI	CCWWGG	1 cut(s)	924
FaeI	CATG	3 cut(s)	853, 1526, 1589
FalI	AAGNNNNNCTT	2 cut(s)	1853, 1885
FaqI	GGGAC	1 cut(s)	224
FatI	CATG	3 cut(s)	849, 1522, 1585
FauI	CCCGC	2 cut(s)	95, 170
Fnu4HI	GCNGC	9 cut(s)	367, 370, 384, 453, 456, 459, 591, 1035, 1897
FokI	GGATG	5 cut(s)	593, 817, 884, 1244, 1245
FriOI	GRGCYC	1 cut(s)	1998
Fsp4HI	GCNGC	9 cut(s)	367, 370, 384, 453, 456, 459, 591, 1035, 1897
FspBI	CTAG	3 cut(s)	567, 771, 1784
GlaI	GCGC	2 cut(s)	224, 440
GluI	GCNGC	9 cut(s)	367, 370, 384, 453, 456, 459, 591, 1035, 1897
GsaI	CCCAGC	2 cut(s)	190, 948
GsuI	CTGGAG	2 cut(s)	589, 980
HaeII	RGCGCY	1 cut(s)	226
HaeIII	GGCC	5 cut(s)	351, 369, 383, 530, 1874
HapII	CCGG	2 cut(s)	210, 415
HhaI	GCGC	2 cut(s)	225, 441
Hin1I	GRCGYC	2 cut(s)	223, 273
Hin1II	CATG	3 cut(s)	853, 1526, 1589
Hin6I	GCGC	2 cut(s)	223, 439
HinP1I	GCGC	2 cut(s)	223, 439
HincII	GTYRAC	1 cut(s)	1749
HindII	GTYRAC	1 cut(s)	1749
HindIII	AAGCTT	1 cut(s)	883
HinfI	GANTC	5 cut(s)	334, 475, 542, 1682, 1953
HpaII	CCGG	2 cut(s)	210, 415
HphI	GGTGA	3 cut(s)	151, 1198, 1247
Hpy166II	GTNNAC	3 cut(s)	847, 1458, 1749
Hpy188III	TCNNGA	8 cut(s)	712, 802, 1027, 1262, 1492, 1523, 1622, 2027
Hpy8I	GTNNAC	3 cut(s)	847, 1458, 1749
Hpy99I	CGWCG	4 cut(s)	114, 290, 293, 350
HpyAV	CCTTC	6 cut(s)	608, 787, 1219, 1295, 1460, 1529
HpyCH4III	ACNGT	3 cut(s)	940, 1141, 1635
HpyCH4IV	ACGT	4 cut(s)	273, 291, 1314, 1984
HpyF10VI	GCNNNNNNNGC	7 cut(s)	222, 458, 464, 590, 599, 1616, 1625
HpyF3I	CTNAG	5 cut(s)	435, 758, 1224, 1461, 1686
HpySE526I	ACGT	4 cut(s)	273, 291, 1314, 1984
Hsp92I	GRCGYC	2 cut(s)	223, 273
Hsp92II	CATG	3 cut(s)	853, 1526, 1589
HspAI	GCGC	2 cut(s)	223, 439
KasI	GGCGCC	1 cut(s)	222
KpnI	GGTACC	1 cut(s)	8
Kzo9I	GATC	7 cut(s)	429, 487, 714, 761, 1203, 1417, 2029
LmnI	GCTCC	4 cut(s)	614, 617, 1297, 1993
Lsp1109I	GCAGC	5 cut(s)	464, 470, 577, 1021, 1908
LweI	GCATC	6 cut(s)	571, 577, 795, 808, 1060, 1267
MaeI	CTAG	3 cut(s)	567, 771, 1784
MaeII	ACGT	4 cut(s)	273, 291, 1314, 1984
MaeIII	GTNAC	5 cut(s)	709, 781, 1588, 1837, 1980
MalI	GATC	7 cut(s)	431, 489, 716, 763, 1205, 1419, 2031
MboI	GATC	7 cut(s)	429, 487, 714, 761, 1203, 1417, 2029
MfeI	CAATTG	2 cut(s)	257, 1800
MflI	RGATCY	1 cut(s)	761
MhlI	GDGCHC	1 cut(s)	1998
MluCI	AATT	8 cut(s)	155, 257, 899, 1083, 1118, 1373, 1568, 1800
Mly113I	GGCGCC	1 cut(s)	223
MmeI	TCCRAC	3 cut(s)	309, 388, 524
MroXI	GAANNNNTTC	2 cut(s)	657, 797
MseI	TTAA	7 cut(s)	684, 954, 1122, 1146, 1173, 1302, 1427
MslI	CAYNNNNRTG	2 cut(s)	524, 1263
MspI	CCGG	2 cut(s)	210, 415
MspR9I	CCNGG	4 cut(s)	210, 416, 750, 1329
MunI	CAATTG	2 cut(s)	257, 1800
Mva1269I	GAATGC	1 cut(s)	1522
MvaI	CCWGG	2 cut(s)	750, 1329
MvnI	CGCG	1 cut(s)	441
MwoI	GCNNNNNNNGC	7 cut(s)	222, 458, 464, 590, 599, 1616, 1625
NarI	GGCGCC	1 cut(s)	223
NciI	CCSGG	2 cut(s)	210, 416
NdeII	GATC	7 cut(s)	429, 487, 714, 761, 1203, 1417, 2029
NlaIII	CATG	3 cut(s)	853, 1526, 1589
NlaIV	GGNNCC	6 cut(s)	6, 224, 240, 264, 747, 922
NmuCI	GTSAC	4 cut(s)	709, 1588, 1837, 1980
NotI	GCGGCCGC	1 cut(s)	367
NspI	RCATGY	1 cut(s)	1589
PagI	TCATGA	1 cut(s)	1522
PciI	ACATGT	1 cut(s)	1585
PctI	GAATGC	1 cut(s)	1522
PdmI	GAANNNNTTC	2 cut(s)	657, 797
PfeI	GAWTC	5 cut(s)	334, 475, 542, 1682, 1953
PkrI	GCNGC	9 cut(s)	368, 371, 385, 454, 457, 460, 592, 1036, 1898
Ple19I	CGATCG	1 cut(s)	1420
PluTI	GGCGCC	1 cut(s)	226
PmaCI	CACGTG	1 cut(s)	1985
PmlI	CACGTG	1 cut(s)	1985
Ppu21I	YACGTR	1 cut(s)	1985
PpuMI	RGGWCCY	2 cut(s)	238, 2111
PscI	ACATGT	1 cut(s)	1585
PshBI	ATTAAT	1 cut(s)	1146
Psp124BI	GAGCTC	1 cut(s)	1998
Psp1406I	AACGTT	1 cut(s)	1314
Psp5II	RGGWCCY	2 cut(s)	238, 2111
Psp6I	CCWGG	2 cut(s)	748, 1327
PspCI	CACGTG	1 cut(s)	1985
PspFI	CCCAGC	2 cut(s)	186, 944
PspGI	CCWGG	2 cut(s)	748, 1327
PspN4I	GGNNCC	6 cut(s)	6, 224, 240, 264, 747, 922
PspPI	GGNCC	3 cut(s)	238, 262, 2111
PspPPI	RGGWCCY	2 cut(s)	238, 2111
PstI	CTGCAG	1 cut(s)	595
PstNI	CAGNNNCTG	1 cut(s)	590
PsuI	RGATCY	1 cut(s)	761
PvuI	CGATCG	1 cut(s)	1420
RsaI	GTAC	5 cut(s)	6, 848, 1380, 1457, 1756
RsaNI	GTAC	5 cut(s)	5, 847, 1379, 1456, 1755
RseI	CAYNNNNRTG	2 cut(s)	524, 1263
SacI	GAGCTC	1 cut(s)	1998
SaqAI	TTAA	7 cut(s)	684, 954, 1122, 1146, 1173, 1302, 1427
SatI	GCNGC	9 cut(s)	367, 370, 384, 453, 456, 459, 591, 1035, 1897
Sau3AI	GATC	7 cut(s)	429, 487, 714, 761, 1203, 1417, 2029
Sau96I	GGNCC	3 cut(s)	238, 262, 2111
ScrFI	CCNGG	4 cut(s)	210, 416, 750, 1329
SduI	GDGCHC	1 cut(s)	1998
SfaNI	GCATC	6 cut(s)	571, 577, 795, 808, 1060, 1267
SfcI	CTRYAG	1 cut(s)	591
SfoI	GGCGCC	1 cut(s)	224
SinI	GGWCC	3 cut(s)	238, 262, 2111
SmiMI	CAYNNNNRTG	2 cut(s)	524, 1263
SmlI	CTYRAG	3 cut(s)	1529, 1715, 2086
SmoI	CTYRAG	3 cut(s)	1529, 1715, 2086
Sse9I	AATT	8 cut(s)	155, 257, 899, 1083, 1118, 1373, 1568, 1800
SsiI	CCGC	6 cut(s)	88, 163, 366, 370, 384, 456
SspDI	GGCGCC	1 cut(s)	222
SspMI	CTAG	3 cut(s)	567, 771, 1784
SstI	GAGCTC	1 cut(s)	1998
StyD4I	CCNGG	4 cut(s)	208, 414, 748, 1327
StyI	CCWWGG	1 cut(s)	924
TaaI	ACNGT	3 cut(s)	940, 1141, 1635
TaiI	ACGT	4 cut(s)	276, 294, 1317, 1987
TaqI	TCGA	3 cut(s)	306, 345, 984
TasI	AATT	8 cut(s)	155, 257, 899, 1083, 1118, 1373, 1568, 1800
TatI	WGTACW	2 cut(s)	846, 1754
TauI	GCSGC	4 cut(s)	369, 372, 386, 458
TfiI	GAWTC	5 cut(s)	334, 475, 542, 1682, 1953
Tru1I	TTAA	7 cut(s)	684, 954, 1122, 1146, 1173, 1302, 1427
Tru9I	TTAA	7 cut(s)	684, 954, 1122, 1146, 1173, 1302, 1427
TscAI	CASTG	4 cut(s)	1047, 1472, 1694, 1920
TseFI	GTSAC	4 cut(s)	709, 1588, 1837, 1980
TseI	GCWGC	5 cut(s)	452, 458, 590, 1034, 1896
Tsp45I	GTSAC	4 cut(s)	709, 1588, 1837, 1980
TspDTI	ATGAA	8 cut(s)	6, 711, 888, 970, 1325, 1537, 1787, 2130
TspRI	CASTG	4 cut(s)	1047, 1472, 1694, 1920
VpaK11BI	GGWCC	3 cut(s)	238, 262, 2111
VspI	ATTAAT	1 cut(s)	1146
XagI	CCTNNNNNAGG	2 cut(s)	377, 1367
XapI	RAATTY	3 cut(s)	899, 1118, 1373
XceI	RCATGY	1 cut(s)	1589
XcmI	CCANNNNNNNNNTGG	2 cut(s)	209, 1867
XmnI	GAANNNNTTC	2 cut(s)	657, 797
XspI	CTAG	3 cut(s)	567, 771, 1784
ZraI	GACGTC	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.