AT1G05830

Histone-lysine N-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002114
Physical Location & Seq
Forward (+)
1754130 .. 1761909
7780 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G05830.2

Sequence Viewer

Length: 3252 bp
ATGATTTCAATGTCGTGTGTCCCAAAAGAAGAAGAAGGAGAAGATACCCAAATCAAAACCGAACTCCACGACCACGCTGCTGATAATCCTGTTCGTTACGCCTCTCTTGAGAGCGTTTACTCCGTTTCCTCTTCCTCGTCTTCATTGTGTTGCAAGACCGCCGCTGGTTCCCACAAGAAGGTCAATGCCCTCAAGCTCCCAATGAGCGATAGTTTTGAGTTGCAGCCTCATCGGCGACCGGAGATTGTTCACGTCTATTGTCGCCGTAAGAGGAGGAGGCGGCGGCGGAGGGAGTCTTTCCTTGAGTTAGCAATACTTCAGAATGAGGGAGTGGAGAGAGATGATCGGATTGTGAAAATTGAAAGTGCGGAGCTTGATGATGAGAAGGAGGAGGAGAATAAGAAGAAGAAGCAGAAGAAAAGGAGGATTGGTAATGGCGAGCTCATGAAACTGGGCGTGGATTCGACTACTTTAAGCGTCTCTGCTACCCCGCCTTTACGGGGATGTCGAATTAAAGCTGTGTGTAGCGGAAATAAACAAGATGGATCTTCCCGGAGTAAGAGGAATACTGTCAAGAATCAGGAGAAGGTAGTTACAGCTTCTGCTACAGCTAAGAAATGGGTCAGGTTGAGTTATGATGGAGTCGATCCTAAACATTTCATTGGGCTGCAATGCAAGGTTTTTTGGCCATTGGATGCTGTTTGGTATCCTGGTTCTATCGTCGGATATAATGTAGAGACAAAGCATCACATTGTTAAATATGGAGATGGAGATGGAGAGGAATTAGCTCTTCGTCGTGAAAAGATCAAGTTTTTAATTTCTCGTGACGACATGGAGTTGCTAAACATGAAGTTTGGTACTAATGATGTGGTCGTTGATGGTCAAGATTATGATGAACTGGTTATATTGGCTGCTTCTTTTGAGGAGTGCCAAGATTTTGAGCCTAGAGACATCATATGGGCCAAACTAACTGGTCATGCTATGTGGCCAGCAATTATCGTGGATGAGTCTGTTATTGTAAAGCGGAAAGGTCTAAACAACAAGATCTCTGGAGGAAGATCAGTCCTCGTACAGTTTTTTGGCACCCATGATTTTGCTAGAATACAAGTCAAACAAGCGGTCTCATTTCTAAAAGGGCTTCTCTCACGGTCCCCCCTGAAGTGCAAGCAACCTCGGTTTGAAGAGGCCATGGAGGAGGCAAAAATGTACCTAAAAGAATATAAGCTTCCAGGAAGGATGGATCAACTTCAGAAAGTTGCTGATACTGATTGTTCGGAAAGGATTAATAGTGGAGAAGAGGACAGCTCAAACTCGGGTGATGATTACACAAAAGATGGAGAAGTCTGGTTGCGGCCAACAGAACTTGGAGATTGCTTGCATAGAATAGGCGATCTGCAAATAATTAATCTTGGAAGGATCGTGACAGACTCAGAATTTTTCAAGGATAGTAAGCATACTTGGCCTGAAGGGTATACAGCTACAAGAAAATTCATATCACTAAAAGATCCTAATGCATCTGCCATGTACAAGATGGAAGTGCTTAGAGATGCCGAGTCAAAGACTCGCCCTGTTTTCAGAGTGACGACCAATAGCGGTGAGCAGTTCAAAGGGGACACTCCATCTGCCTGCTGGAATAAAATATATAATAGGATAAAAAAGATTCAGATTGCTTCTGATAATCCTGATGTTTTGGGTGAAGGACTTCATGAATCTGGTACAGATATGTTTGGCTTCTCCAACCCAGAAGTCGATAAACTTATTCAGGGGCTATTACAATCCAGACCACCTTCCAAGGTTTCTCAGCGCAAATATAGTTCGGGAAAGTATCAAGATCATCCTACTGGTTACCGACCTGTACGGGTGGAGTGGAAAGATCTTGATAAGTGCAATGTCTGCCACATGGATGAGGAATATGAGAACAATTTGTTCCTGCAATGTGATAAATGTAGAATGATGGTCCATACTAGATGCTATGGCCAGCTGGAACCCCATAATGGCATTCTGTGGTTATGCAACTTATGTCGTCCTGTCGCTCTTGATATTCCTCCTCGATGTTGTCTTTGTCCTGTAGTAGGGGGCGCTATGAAGCCGACAACTGATGGGCGCTGGGCTCATCTGGCTTGTGCCATATGGATCCCAGAAACATGCTTATTGGATGTCAAGAAGATGGAACCGATCGATGGGGTTAAGAAAGTCAGTAAGGATCGTTGGAAACTATTGTGCAGCATCTGTGGTGTATCTTATGGAGCTTGTATCCAATGTTCAAATAATACTTGTCGAGTGGCATATCATCCGCTATGTGCACGAGCTGCTGGTCTCTGTGTTGAGCTTGCAGATGAGGATAGGCTTTTTCTTCTATCAATGGATGACGATGAAGCAGATCAGTGCATCCGCCTGCTTTCATTTTGCAAGAGGCATCGACAAACGTCAAATTACCACCTAGAAACAGAGTACATGATCAAACCTGCTCACAATATTGCCGAGTATCTCCCACCTCCTAATCCATCTGGCTGTGCTCGCACTGAGCCATATAATTATCTTGGAAGAAGAGGACGAAAGGAACCTGAAGCTCTTGCTGGTGCTTCTTCAAAGCGATTATTTGTTGAGAATCAACCGTATATTGTTGGCGGATACTCTCGACATGAATTTTCAACCTACGAACGCATTTATGGATCAAAGATGTCCCAAATAACTACTCCGAGCAATATTCTATCTATGGCCGAGAAATATACATTCATGAAGGAAACCTACAGGAAGAGATTAGCATTCGGGAAATCGGGAATTCATGGTTTTGGGATCTTTGCAAAGCTTCCGCACAGAGCCGGAGATATGGTGATTGAGTACACTGGTGAACTTGTTAGGCCACCAATAGCTGACAAGAGAGAGCATCTTATATACAACTCAATGGTGGGTGCCGGGACCTATATGTTTAGAATTGATAATGAGCGGGTCATAGACGCAACAAGGACAGGAAGCATTGCTCACCTTATCAATCATTCATGTGAGCCAAATTGCTATTCAAGAGTCATCAGTGTTAATGGTGATGAGCATATTATCATATTTGCAAAGAGAGATGTCGCAAAATGGGAGGAGCTGACCTATGATTATAGGTTCTTTTCAATTGATGAGCGCCTTGCATGTTACTGTGGTTTCCCAAGATGCCGGGGTGTTGTTAATGACACAGAAGCCGAAGAACGACAGGCAAATATTCATGCTTCTCGCTGTGAGTTAAAAGAGTGGACAGAGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000785 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005886 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008289 GO:0008757 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009909 GO:0009987 GO:0010093 GO:0010314 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031326 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035091 GO:0036211 GO:0042054 GO:0042800 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051276 GO:0051568 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901981 GO:1903506 GO:1905392 GO:1905393 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN PHD_2 PWWP SET zf-HC5HC2H_2

Protein Analysis

1083

Amino Acids

123.29

Weight (kDa)

8.19

Isoelectric Point (pI)

46.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 317 - 404 3.7e-16 PWWP domain
FYRN PF05964 461 - 515 4.5e-17 F/Y-rich N-terminus
FYRC PF05965 522 - 590 2.2e-10 F/Y rich C-terminus
PHD_2 PF13831 641 - 674 1.9e-06 PHD-finger
zf-HC5HC2H_2 PF13832 684 - 806 1.2e-31 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 705 - 807 4e-20 PHD-like zinc-binding domain
SET PF00856 930 - 1036 5.9e-24 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2473
AccB1I GGYRCC 2 cut(s) 1082, 2912
AccBSI CCGCTC 1 cut(s) 2947
AccI GTMKAC 1 cut(s) 1472
AcoI YGGCCR 5 cut(s) 686, 986, 1352, 1975, 2718
AcsI RAATTY 4 cut(s) 1433, 1487, 2645, 2781
AcuI CTGAAG 5 cut(s) 302, 1178, 1232, 1485, 2586
AfaI GTAC 8 cut(s) 859, 1071, 1208, 1526, 1717, 1857, 2453, 2843
AfiI CCNNNNNNNGG 5 cut(s) 178, 500, 1994, 2072, 2180
AjiI CACGTC 1 cut(s) 253
AjnI CCWGG 2 cut(s) 709, 1228
AjuI GAANNNNNNNTTGG 2 cut(s) 3001, 3033
Alw21I GWGCWC 3 cut(s) 444, 2305, 2518
Alw26I GTCTC 5 cut(s) 484, 731, 942, 1126, 2321
Alw44I GTGCAC 1 cut(s) 2301
AlwNI CAGNNNCTG 2 cut(s) 602, 2229
Ama87I CYCGRG 1 cut(s) 1312
AoxI GGCC 9 cut(s) 686, 960, 986, 1185, 1352, 1460, 1975, 2718, 2861
ApaLI GTGCAC 1 cut(s) 2301
ApeKI GCWGC 6 cut(s) 77, 223, 667, 911, 2223, 2309
ApoI RAATTY 4 cut(s) 1433, 1487, 2645, 2781
ArsI GACNNNNNNTTYG 2 cut(s) 1104, 1136
AseI ATTAAT 2 cut(s) 1284, 1404
Asp700I GAANNNNTTC 1 cut(s) 1701
AspLEI GCGC 4 cut(s) 1806, 2081, 2106, 3132
AspS9I GGNCC 4 cut(s) 960, 1149, 1957, 2919
AsuC2I CCSGG 3 cut(s) 553, 2917, 3164
AsuHPI GGTGA 7 cut(s) 1328, 1607, 1706, 2845, 2861, 2975, 3053
AvaI CYCGRG 1 cut(s) 1312
AvaII GGWCC 3 cut(s) 1149, 1957, 2919
BaeGI GKGCMC 1 cut(s) 2305
BalI TGGCCA 3 cut(s) 688, 988, 1977
BamHI GGATCC 1 cut(s) 2133
BanI GGYRCC 2 cut(s) 1082, 2912
BanII GRGCYC 2 cut(s) 444, 2113
BarI GAAGNNNNNNTAC 2 cut(s) 2732, 2764
BauI CACGAG 2 cut(s) 822, 2304
BbsI GAAGAC 1 cut(s) 132
Bbv12I GWGCWC 3 cut(s) 444, 2305, 2518
BbvI GCAGC 6 cut(s) 64, 235, 654, 898, 2235, 2296
BceAI ACGGC 1 cut(s) 249
BcgI CGANNNNNNTGC 4 cut(s) 59, 93, 212, 246
BciT130I CCWGG 2 cut(s) 711, 1230
BciVI GTATCC 3 cut(s) 717, 2264, 2624
BclI TGATCA 1 cut(s) 2457
BcnI CCSGG 3 cut(s) 553, 2917, 3164
BcoDI GTCTC 5 cut(s) 484, 731, 942, 1126, 2321
BfaI CTAG 4 cut(s) 945, 1098, 1965, 2441
BfmI CTRYAG 3 cut(s) 606, 2067, 2749
BfoI RGCGCY 3 cut(s) 2082, 2107, 3133
BfuAI ACCTGC 1 cut(s) 2473
BfuI GTATCC 3 cut(s) 717, 2264, 2624
BglI GCCNNNNNGGC 1 cut(s) 232
BglII AGATCT 2 cut(s) 1044, 1873
Bme1390I CCNGG 5 cut(s) 553, 711, 1230, 2917, 3164
Bme18I GGWCC 3 cut(s) 1149, 1957, 2919
BmeT110I CYCGRG 1 cut(s) 1312
BmgBI CACGTC 1 cut(s) 253
BmgT120I GGNCC 4 cut(s) 960, 1149, 1957, 2919
BmiI GGNNCC 9 cut(s) 169, 1084, 1151, 1986, 2135, 2172, 2562, 2914, 2920
BmrFI CCNGG 5 cut(s) 553, 711, 1230, 2917, 3164
BmrI ACTGGG 1 cut(s) 461
BmuI ACTGGG 1 cut(s) 461
BoxI GACNNNNGTC 1 cut(s) 2425
BpiI GAAGAC 1 cut(s) 132
BplI GAGNNNNNCTC 2 cut(s) 1289, 1321
BpmI CTGGAG 1 cut(s) 1071
BpuEI CTTGAG 3 cut(s) 128, 176, 323
BpuMI CCSGG 3 cut(s) 553, 2917, 3164
Bsa29I ATCGAT 1 cut(s) 2178
BsaI GGTCTC 2 cut(s) 1126, 2321
BsaJI CCNNGG 4 cut(s) 1172, 1188, 1791, 3163
BsaWI WCCGGW 1 cut(s) 238
BsaXI ACNNNNNCTCC 4 cut(s) 415, 445, 2817, 2847
Bsc4I CCNNNNNNNGG 5 cut(s) 178, 500, 1994, 2072, 2180
Bse1I ACTGG 5 cut(s) 456, 903, 976, 1846, 2851
Bse3DI GCAATG 4 cut(s) 677, 1894, 1940, 2976
BseBI CCWGG 2 cut(s) 711, 1230
BseCI ATCGAT 1 cut(s) 2178
BseDI CCNNGG 4 cut(s) 1172, 1188, 1791, 3163
BseLI CCNNNNNNNGG 5 cut(s) 178, 500, 1994, 2072, 2180
BseMI GCAATG 4 cut(s) 677, 1894, 1940, 2976
BseMII CTCAG 3 cut(s) 1443, 1814, 2514
BseNI ACTGG 5 cut(s) 456, 903, 976, 1846, 2851
BseRI GAGGAG 8 cut(s) 286, 289, 404, 407, 938, 1208, 2037, 3104
BseSI GKGCMC 1 cut(s) 2305
BseXI GCAGC 6 cut(s) 64, 235, 654, 898, 2235, 2296
BseYI CCCAGC 1 cut(s) 2106
BsgI GTGCAG 1 cut(s) 2242
Bsh1285I CGRYCG 2 cut(s) 239, 2178
BshFI GGCC 9 cut(s) 688, 962, 988, 1187, 1354, 1462, 1977, 2720, 2863
BshNI GGYRCC 2 cut(s) 1082, 2912
BshVI ATCGAT 1 cut(s) 2178
BsiEI CGRYCG 2 cut(s) 239, 2178
BsiHKAI GWGCWC 3 cut(s) 444, 2305, 2518
BsiHKCI CYCGRG 1 cut(s) 1312
BsiSI CCGG 5 cut(s) 239, 553, 2823, 2916, 3163
BslFI GGGAC 5 cut(s) 5, 1135, 1625, 2668, 2932
BslI CCNNNNNNNGG 5 cut(s) 178, 500, 1994, 2072, 2180
BsmAI GTCTC 5 cut(s) 484, 731, 942, 1126, 2321
BsmBI CGTCTC 1 cut(s) 484
BsmFI GGGAC 5 cut(s) 5, 1135, 1625, 2668, 2932
BsmI GAATGC 2 cut(s) 1998, 2765
BsnI GGCC 9 cut(s) 688, 962, 988, 1187, 1354, 1462, 1977, 2720, 2863
Bso31I GGTCTC 2 cut(s) 1126, 2321
BsoBI CYCGRG 1 cut(s) 1312
Bsp1286I GDGCHC 4 cut(s) 444, 2113, 2305, 2518
Bsp1407I TGTACA 1 cut(s) 1524
Bsp19I CCATGG 1 cut(s) 1188
BspANI GGCC 9 cut(s) 688, 962, 988, 1187, 1354, 1462, 1977, 2720, 2863
BspCNI CTCAG 3 cut(s) 1442, 1813, 2515
BspDI ATCGAT 1 cut(s) 2178
BspHI TCATGA 3 cut(s) 444, 1705, 2736
BspLI GGNNCC 9 cut(s) 169, 1084, 1151, 1986, 2135, 2172, 2562, 2914, 2920
BspMI ACCTGC 1 cut(s) 2473
BspQI GCTCTTC 1 cut(s) 795
BspT107I GGYRCC 2 cut(s) 1082, 2912
BspTNI GGTCTC 2 cut(s) 1126, 2321
BsrBI CCGCTC 1 cut(s) 2947
BsrDI GCAATG 4 cut(s) 677, 1894, 1940, 2976
BsrGI TGTACA 1 cut(s) 1524
BsrI ACTGG 5 cut(s) 456, 903, 976, 1846, 2851
BssECI CCNNGG 4 cut(s) 1172, 1188, 1791, 3163
BssNAI GTATAC 1 cut(s) 1473
BssSI CACGAG 2 cut(s) 822, 2304
BssT1I CCWWGG 2 cut(s) 1188, 1791
Bst1107I GTATAC 1 cut(s) 1473
Bst2BI CACGAG 2 cut(s) 822, 2304
Bst2UI CCWGG 2 cut(s) 711, 1230
Bst4CI ACNGT 5 cut(s) 571, 1074, 1149, 2616, 3146
Bst6I CTCTTC 6 cut(s) 136, 795, 1176, 1290, 2542, 2750
BstAPI GCANNNNNTGC 2 cut(s) 1893, 2309
BstAUI TGTACA 1 cut(s) 1524
BstC8I GCNNGC 9 cut(s) 440, 990, 1166, 1376, 1627, 1979, 2331, 2396, 2518
BstDEI CTNAG 5 cut(s) 612, 1429, 1541, 1800, 2523
BstDSI CCRYGG 1 cut(s) 1188
BstEII GGTNACC 1 cut(s) 1844
BstENI CCTNNNNNAGG 1 cut(s) 2070
BstH2I RGCGCY 3 cut(s) 2082, 2107, 3133
BstHHI GCGC 4 cut(s) 1806, 2081, 2106, 3132
BstMAI GTCTC 5 cut(s) 484, 731, 942, 1126, 2321
BstMCI CGRYCG 2 cut(s) 239, 2178
BstMWI GCNNNNNNNGC 6 cut(s) 232, 1459, 1893, 2117, 2309, 2517
BstNI CCWGG 2 cut(s) 711, 1230
BstNSI RCATGY 2 cut(s) 2148, 3141
BstPAI GACNNNNGTC 1 cut(s) 2425
BstPI GGTNACC 1 cut(s) 1844
BstSCI CCNGG 5 cut(s) 551, 709, 1228, 2915, 3162
BstSFI CTRYAG 3 cut(s) 606, 2067, 2749
BstSLI GKGCMC 1 cut(s) 2305
BstV1I GCAGC 6 cut(s) 64, 235, 654, 898, 2235, 2296
BstV2I GAAGAC 1 cut(s) 132
BstX2I RGATCY 6 cut(s) 545, 1044, 1504, 1873, 2133, 2796
BstYI RGATCY 6 cut(s) 545, 1044, 1504, 1873, 2133, 2796
BstZ17I GTATAC 1 cut(s) 1473
Bsu15I ATCGAT 1 cut(s) 2178
BsuI GTATCC 3 cut(s) 717, 2264, 2624
BsuRI GGCC 9 cut(s) 688, 962, 988, 1187, 1354, 1462, 1977, 2720, 2863
BsuTUI ATCGAT 1 cut(s) 2178
BtgI CCRYGG 1 cut(s) 1188
BtrI CACGTC 1 cut(s) 253
BtsIMutI CAGTG 4 cut(s) 2390, 2520, 2844, 3037
BveI ACCTGC 1 cut(s) 2473
Cac8I GCNNGC 9 cut(s) 440, 990, 1166, 1376, 1627, 1979, 2331, 2396, 2518
CaiI CAGNNNCTG 2 cut(s) 602, 2229
CciI TCATGA 3 cut(s) 444, 1705, 2736
CfoI GCGC 4 cut(s) 1806, 2081, 2106, 3132
Cfr13I GGNCC 4 cut(s) 960, 1149, 1957, 2919
ClaI ATCGAT 1 cut(s) 2178
CseI GACGC 2 cut(s) 466, 2966
Csp6I GTAC 8 cut(s) 858, 1070, 1207, 1525, 1716, 1856, 2452, 2842
CspCI CAANNNNNGTGG 2 cut(s) 981, 1016
CviQI GTAC 8 cut(s) 858, 1070, 1207, 1525, 1716, 1856, 2452, 2842
DdeI CTNAG 5 cut(s) 612, 1429, 1541, 1800, 2523
EaeI YGGCCR 5 cut(s) 686, 986, 1352, 1975, 2718
Eam1104I CTCTTC 6 cut(s) 136, 795, 1176, 1290, 2542, 2750
EarI CTCTTC 6 cut(s) 136, 795, 1176, 1290, 2542, 2750
EciI GGCGGA 3 cut(s) 301, 2381, 2643
Ecl136II GAGCTC 1 cut(s) 442
Eco130I CCWWGG 2 cut(s) 1188, 1791
Eco24I GRGCYC 2 cut(s) 444, 2113
Eco31I GGTCTC 2 cut(s) 1126, 2321
Eco47I GGWCC 3 cut(s) 1149, 1957, 2919
Eco53kI GAGCTC 1 cut(s) 442
Eco57I CTGAAG 5 cut(s) 302, 1178, 1232, 1485, 2586
Eco88I CYCGRG 1 cut(s) 1312
Eco91I GGTNACC 1 cut(s) 1844
EcoICRI GAGCTC 1 cut(s) 442
EcoNI CCTNNNNNAGG 1 cut(s) 2070
EcoO109I RGGNCCY 1 cut(s) 2919
EcoO65I GGTNACC 1 cut(s) 1844
EcoRI GAATTC 1 cut(s) 2781
EcoRII CCWGG 2 cut(s) 709, 1228
EcoT14I CCWWGG 2 cut(s) 1188, 1791
EcoT22I ATGCAT 1 cut(s) 1516
EcoT38I GRGCYC 2 cut(s) 444, 2113
ErhI CCWWGG 2 cut(s) 1188, 1791
Esp3I CGTCTC 1 cut(s) 484
FaqI GGGAC 5 cut(s) 5, 1135, 1625, 2668, 2932
FauI CCCGC 2 cut(s) 498, 2940
FauNDI CATATG 2 cut(s) 956, 2129
FbaI TGATCA 1 cut(s) 2457
FblI GTMKAC 1 cut(s) 1472
FriOI GRGCYC 2 cut(s) 444, 2113
FspBI CTAG 4 cut(s) 945, 1098, 1965, 2441
GlaI GCGC 4 cut(s) 1805, 2080, 2105, 3131
GsaI CCCAGC 1 cut(s) 2110
GsuI CTGGAG 1 cut(s) 1071
HaeII RGCGCY 3 cut(s) 2082, 2107, 3133
HaeIII GGCC 9 cut(s) 688, 962, 988, 1187, 1354, 1462, 1977, 2720, 2863
HapII CCGG 5 cut(s) 239, 553, 2823, 2916, 3163
HgaI GACGC 2 cut(s) 466, 2966
HhaI GCGC 4 cut(s) 1806, 2081, 2106, 3132
Hin6I GCGC 4 cut(s) 1804, 2079, 2104, 3130
HinP1I GCGC 4 cut(s) 1804, 2079, 2104, 3130
HindIII AAGCTT 2 cut(s) 1223, 2807
HpaII CCGG 5 cut(s) 239, 553, 2823, 2916, 3163
HphI GGTGA 7 cut(s) 1328, 1607, 1706, 2845, 2861, 2975, 3053
Hpy166II GTNNAC 7 cut(s) 118, 250, 1473, 2303, 2844, 2852, 3240
Hpy8I GTNNAC 7 cut(s) 118, 250, 1473, 2303, 2844, 2852, 3240
Hpy99I CGWCG 2 cut(s) 725, 798
HpyCH4III ACNGT 5 cut(s) 571, 1074, 1149, 2616, 3146
HpyCH4IV ACGT 2 cut(s) 252, 2426
HpyF10VI GCNNNNNNNGC 6 cut(s) 232, 1459, 1893, 2117, 2309, 2517
HpyF3I CTNAG 5 cut(s) 612, 1429, 1541, 1800, 2523
HpySE526I ACGT 2 cut(s) 252, 2426
HspAI GCGC 4 cut(s) 1804, 2079, 2104, 3130
Ksp22I TGATCA 1 cut(s) 2457
LguI GCTCTTC 1 cut(s) 795
LmnI GCTCC 4 cut(s) 201, 370, 2246, 3091
Lsp1109I GCAGC 6 cut(s) 64, 235, 654, 898, 2235, 2296
MaeI CTAG 4 cut(s) 945, 1098, 1965, 2441
MaeII ACGT 2 cut(s) 252, 2426
MaeIII GTNAC 7 cut(s) 95, 592, 824, 1420, 1579, 1844, 3140
MbiI CCGCTC 1 cut(s) 2947
MfeI CAATTG 1 cut(s) 3120
MflI RGATCY 6 cut(s) 545, 1044, 1504, 1873, 2133, 2796
MhlI GDGCHC 4 cut(s) 444, 2113, 2305, 2518
MlsI TGGCCA 3 cut(s) 688, 988, 1977
MluNI TGGCCA 3 cut(s) 688, 988, 1977
MlyI GAGTC 7 cut(s) 302, 651, 1016, 1421, 1555, 1562, 3033
MmeI TCCRAC 3 cut(s) 703, 1761, 2189
Mox20I TGGCCA 3 cut(s) 688, 988, 1977
Mph1103I ATGCAT 1 cut(s) 1516
MroXI GAANNNNTTC 1 cut(s) 1701
MscI TGGCCA 3 cut(s) 688, 988, 1977
MslI CAYNNNNRTG 2 cut(s) 1902, 3000
Msp20I TGGCCA 3 cut(s) 688, 988, 1977
MspA1I CMGCKG 2 cut(s) 164, 1981
MspI CCGG 5 cut(s) 239, 553, 2823, 2916, 3163
MspR9I CCNGG 5 cut(s) 553, 711, 1230, 2917, 3164
MunI CAATTG 1 cut(s) 3120
Mva1269I GAATGC 2 cut(s) 1998, 2765
MvaI CCWGG 2 cut(s) 711, 1230
MwoI GCNNNNNNNGC 6 cut(s) 232, 1459, 1893, 2117, 2309, 2517
NciI CCSGG 3 cut(s) 553, 2917, 3164
NcoI CCATGG 1 cut(s) 1188
NdeI CATATG 2 cut(s) 956, 2129
NlaIV GGNNCC 9 cut(s) 169, 1084, 1151, 1986, 2135, 2172, 2562, 2914, 2920
NmeAIII GCCGAG 3 cut(s) 1576, 2506, 2746
NmuCI GTSAC 3 cut(s) 824, 1420, 1579
NsiI ATGCAT 1 cut(s) 1516
NspI RCATGY 2 cut(s) 2148, 3141
PagI TCATGA 3 cut(s) 444, 1705, 2736
PciSI GCTCTTC 1 cut(s) 795
PcsI WCGNNNNNNNCGW 1 cut(s) 505
PctI GAATGC 2 cut(s) 1998, 2765
PdmI GAANNNNTTC 1 cut(s) 1701
PfeI GAWTC 5 cut(s) 461, 577, 1660, 1709, 2608
PflFI GACNNNGTC 1 cut(s) 3244
PfoI TCCNGGA 2 cut(s) 551, 1228
Ple19I CGATCG 1 cut(s) 2178
PleI GAGTC 7 cut(s) 301, 650, 1015, 1421, 1555, 1561, 3032
PpsI GAGTC 7 cut(s) 301, 650, 1015, 1421, 1555, 1561, 3032
PpuMI RGGWCCY 1 cut(s) 2919
PshAI GACNNNNGTC 1 cut(s) 2425
PshBI ATTAAT 2 cut(s) 1284, 1404
Psp124BI GAGCTC 1 cut(s) 444
Psp5II RGGWCCY 1 cut(s) 2919
Psp6I CCWGG 2 cut(s) 709, 1228
PspEI GGTNACC 1 cut(s) 1844
PspFI CCCAGC 1 cut(s) 2106
PspGI CCWGG 2 cut(s) 709, 1228
PspN4I GGNNCC 9 cut(s) 169, 1084, 1151, 1986, 2135, 2172, 2562, 2914, 2920
PspPI GGNCC 4 cut(s) 960, 1149, 1957, 2919
PspPPI RGGWCCY 1 cut(s) 2919
PsrI GAACNNNNNNTAC 2 cut(s) 2245, 2277
PstNI CAGNNNCTG 2 cut(s) 602, 2229
PsuI RGATCY 6 cut(s) 545, 1044, 1504, 1873, 2133, 2796
PsyI GACNNNGTC 1 cut(s) 3244
PvuI CGATCG 1 cut(s) 2178
PvuII CAGCTG 1 cut(s) 1981
RsaI GTAC 8 cut(s) 859, 1071, 1208, 1526, 1717, 1857, 2453, 2843
RsaNI GTAC 8 cut(s) 858, 1070, 1207, 1525, 1716, 1856, 2452, 2842
RseI CAYNNNNRTG 2 cut(s) 1902, 3000
SacI GAGCTC 1 cut(s) 444
SapI GCTCTTC 1 cut(s) 795
Sau96I GGNCC 4 cut(s) 960, 1149, 1957, 2919
SchI GAGTC 7 cut(s) 302, 651, 1016, 1421, 1555, 1562, 3033
ScrFI CCNGG 5 cut(s) 553, 711, 1230, 2917, 3164
SduI GDGCHC 4 cut(s) 444, 2113, 2305, 2518
SfcI CTRYAG 3 cut(s) 606, 2067, 2749
SinI GGWCC 3 cut(s) 1149, 1957, 2919
SmiMI CAYNNNNRTG 2 cut(s) 1902, 3000
SmlI CTYRAG 3 cut(s) 107, 191, 302
SmoI CTYRAG 3 cut(s) 107, 191, 302
SspI AATATT 3 cut(s) 2476, 2707, 3208
SspMI CTAG 4 cut(s) 945, 1098, 1965, 2441
SstI GAGCTC 1 cut(s) 444
StyD4I CCNGG 5 cut(s) 551, 709, 1228, 2915, 3162
StyI CCWWGG 2 cut(s) 1188, 1791
TaaI ACNGT 5 cut(s) 571, 1074, 1149, 2616, 3146
TaiI ACGT 2 cut(s) 255, 2429
TaqI TCGA 9 cut(s) 464, 508, 645, 1749, 2050, 2178, 2278, 2419, 2638
TatI WGTACW 3 cut(s) 1524, 2451, 2841
TauI GCSGC 4 cut(s) 164, 283, 286, 1354
TfiI GAWTC 5 cut(s) 461, 577, 1660, 1709, 2608
TscAI CASTG 4 cut(s) 2390, 2527, 2851, 3037
TseFI GTSAC 3 cut(s) 824, 1420, 1579
TseI GCWGC 6 cut(s) 77, 223, 667, 911, 2223, 2309
Tsp45I GTSAC 3 cut(s) 824, 1420, 1579
TspGWI ACGGA 1 cut(s) 112
TspRI CASTG 4 cut(s) 2390, 2527, 2851, 3037
Tth111I GACNNNGTC 1 cut(s) 3244
VneI GTGCAC 1 cut(s) 2301
VpaK11BI GGWCC 3 cut(s) 1149, 1957, 2919
VspI ATTAAT 2 cut(s) 1284, 1404
XagI CCTNNNNNAGG 1 cut(s) 2070
XapI RAATTY 4 cut(s) 1433, 1487, 2645, 2781
XceI RCATGY 2 cut(s) 2148, 3141
XcmI CCANNNNNNNNNTGG 2 cut(s) 1528, 1626
XmiI GTMKAC 1 cut(s) 1472
XmnI GAANNNNTTC 1 cut(s) 1701
XspI CTAG 4 cut(s) 945, 1098, 1965, 2441
Zsp2I ATGCAT 1 cut(s) 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.