Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0002114

Physical Location & Seq

Genomic Coordinates Reverse (-)

3226153 .. 3233332

Gene Structure 7180 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1028500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGTTTGGTTTCTCTATACGGGAAGTTGCTAAACGTATTCAGAGGTTATCAAAATCCAGGCTTTCTTCAAAATTACCCAAGTGCAAGTTAGCCTCTAGGAGATATCGAGATGCTCCTGTTGGTTACAGACCTGTTCGTGTGGACTGGAAGGACCTTGATAAATGCAGTGTTTGCCACATGGATGAGTACGAAAACAACCTGTTCCTGCAGTGTGACAAATGCAGAATGATGGTCCATGCAAGATGCTATGGAGAATTGGAACCTGTTGGTGGGGTACTATGGTTATGCAACTTATGTCGGCCTGGGGCTCCTGAACCTCCACCCCCTTGCTACCTTTGTCCTGTAATAGGGGGTGCAATGAAGCCTACAACTGATGGGCGCTGGGCTCATCTGGCTTGTGCCATATGGATACCAGAAACCTGCCTGTCTGATGTTAAGAGAATGGAGCCAATTGATGGGCTTAGTAGAATCAACAAGGACCGTTGGAAGCTATTATGTAGTATCTGTGGGGTTTCATATGGAGCCTGCATTCAGTGTTCGAACCATACGTGTTGTGTGGCATATCACCCACTTTGTGCACGAGCTGCTGGTCTATGTGTTGAGCTTGAGGATGAGGACAGACTACATCTACTATCTGTAGACGATGATGAAGTAGAGCAGTGCATTCGTCTTCTTTCCTTCTGCAAGAAGCATAGGCAGCCAACAAATGACCGTTCAGCTGCTGATAACTGTTTTAGCCGAACGGTGCGCCGATGCTCAGAATACATTCCACCGTCCAATCCATCTGGTTGTGCTCGGACTGAGCCATACAACTATTTTTGTAGAAGAGGGAGAAAAGAACCTGAAGCCATAGCTGCTGCATCCTTAAAGCGTTTGTTTGTCGAAAACCAGCCTTACTTAGTTGGTGGTTACACCCAACACCAACTGTCAAGTAATTCACAGCCTCCAAATGGCTCTAGGTTCTGCTGTAGCCTTCAGAGGCTGAAAGCCTCCCAGCTTGATGCTCCTAATGACATACTATCTATGTCTGAGAAGTATAAATACATGAGGGACACCTTTCGAAAAAGACTAGCATTTGGAAAATCGGGAATTCATGGTTTTGGTATCTTTGCAAAACACCCACATAGAGCAGGGGACATGGTGATTGAGTACACGGGTGAACTTGTTAGACCTCCTGTAGCTGACAGGAGGGAGCATTTCATATATAATTCATTGGTGGGGGCTGGGACTTATATGTTCCGGATTGATGATGAACGAGTCATTGATGCCACAAGAGCTGGAAGCATTGCGCACCTTATTAATCACTCTTGTGAACCAAATTGCTACTCAAGAGTCATAAGTGTTAATAACGATGAGCATATAATTATATTTGCAAAGAGAGACATTAAACGATGGGAAGAACTTACATATGATTATAGATTCTTTTCAATAGATGAACAGCTAGCATGTTATTGTGGTTTCCCAAGATGTCAGGGGGTGGTTAATGATGTTGAATCCGAAGAGCGAGCAACCAAGCTTTGTGCCCCTCGCAGCGAGTTAATAGATTGGAGTGAAATGTCTTGTTGTAAAATATGTTCATTCAAGATCTCGAGGAGACGGATTTCTCCCAACAATCTGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000785 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005886 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008289 GO:0008757 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009909 GO:0009987 GO:0010093 GO:0010314 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031326 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035091 GO:0036211 GO:0042054 GO:0042800 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051276 GO:0051568 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901981 GO:1903506 GO:1905392 GO:1905393 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FYRC FYRN PHD_2 PWWP SET zf-HC5HC2H_2

Protein Analysis

541

Amino Acids

61.65

Weight (kDa)

8.63

Isoelectric Point (pI)

49.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_2	PF13831	66 - 99	1.1e-06	PHD-finger
zf-HC5HC2H_2	PF13832	109 - 231	1.5e-31	PHD-zinc-finger like domain
zf-HC5HC2H	PF13771	130 - 232	4.1e-19	PHD-like zinc-binding domain
SET	PF00856	366 - 472	1.2e-25	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05830 AT1G05830 AT1G05830 AT1G05830 AT2G31650
fragaria_vesca	FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210 FvH4_4g12210
malus_domestica	MD04G1028500.v1.1 MD04G1028600.v1.1 MD13G1278800.v1.1 MD13G1279000.v1.1
prunus_persica	Prupe.1G177800_v2.0.a1 Prupe.1G177800_v2.0.a1 Prupe.1G177800_v2.0.a1 Prupe.1G177800_v2.0.a1
pyrus_communis	pycom13g29460
rosa_chinensis	RchiOBHm_Chr4g0409981
rosa_laevigata	RLG00000008508
rosa_multiflora	Rmu_sc0000706.1_g000028 Rmu_sc0003441.1_g000038
rosa_roxburghii	Rroxscaffold_1G00045570 Rroxscaffold_5G00354500 Rroxscaffold_7G00212600
rosa_rugosa	Rorug04G0100200 Rorug04G0100300 Rorug04G0100400 Rorug04G0100500
rosa_samantha	Rh4AG158800 Rh4BG158200 Rh4CG169800 Rh4DG153800
rosa_wichuraiana	Rw4G013120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1290
Acc36I	ACCTGC	1 cut(s)	428
AccB7I	CCANNNNNTGG	1 cut(s)	455
AccI	GTMKAC	1 cut(s)	639
AccIII	TCCGGA	1 cut(s)	1239
AcsI	RAATTY	1 cut(s)	1089
AcuI	CTGAAG	2 cut(s)	864, 959
AdeI	CACNNNGTG	1 cut(s)	575
AfaI	GTAC	3 cut(s)	188, 276, 1151
AfiI	CCNNNNNNNGG	4 cut(s)	269, 347, 455, 950
AflIII	ACRYGT	1 cut(s)	548
AgsI	TTSAA	4 cut(s)	69, 1428, 1493, 1582
AjnI	CCWGG	2 cut(s)	56, 301
AleI	CACNNNNGTG	1 cut(s)	1308
Alw21I	GWGCWC	2 cut(s)	580, 796
Alw26I	GTCTC	2 cut(s)	1374, 1588
Alw44I	GTGCAC	1 cut(s)	576
AlwNI	CAGNNNCTG	2 cut(s)	722, 982
Ama87I	CYCGRG	1 cut(s)	1588
Aor13HI	TCCGGA	1 cut(s)	1239
AoxI	GGCC	1 cut(s)	299
ApaLI	GTGCAC	1 cut(s)	576
ApeKI	GCWGC	6 cut(s)	584, 697, 719, 854, 857, 1530
ApoI	RAATTY	1 cut(s)	1089
AseI	ATTAAT	1 cut(s)	1299
Asp700I	GAANNNNTTC	1 cut(s)	765
AspLEI	GCGC	3 cut(s)	381, 750, 1291
AspS9I	GGNCC	3 cut(s)	151, 232, 478
AsuHPI	GGTGA	3 cut(s)	557, 1153, 1169
AsuII	TTCGAA	2 cut(s)	539, 1060
AsuNHI	GCTAGC	1 cut(s)	1441
AvaI	CYCGRG	1 cut(s)	1588
AvaII	GGWCC	3 cut(s)	151, 232, 478
BaeGI	GKGCMC	2 cut(s)	580, 1525
BaeI	ACNNNNGTAYC	2 cut(s)	266, 299
BanII	GRGCYC	2 cut(s)	310, 388
BarI	GAAGNNNNNNTAC	2 cut(s)	1025, 1057
BauI	CACGAG	1 cut(s)	579
BbsI	GAAGAC	1 cut(s)	662
Bbv12I	GWGCWC	2 cut(s)	580, 796
BbvI	GCAGC	6 cut(s)	571, 706, 709, 841, 844, 1542
BccI	CCATC	5 cut(s)	223, 368, 449, 790, 1386
BcgI	CGANNNNNNTGC	2 cut(s)	647, 681
BciT130I	CCWGG	2 cut(s)	58, 303
BciVI	GTATCC	1 cut(s)	402
BcoDI	GTCTC	2 cut(s)	1374, 1588
BfaI	CTAG	4 cut(s)	96, 957, 1070, 1442
BfmI	CTRYAG	4 cut(s)	206, 636, 967, 1176
BfoI	RGCGCY	1 cut(s)	382
BfuAI	ACCTGC	1 cut(s)	428
BfuI	GTATCC	1 cut(s)	402
BglII	AGATCT	1 cut(s)	1584
BisI	GCNGC	6 cut(s)	585, 698, 720, 855, 858, 1531
BlsI	GCNGC	6 cut(s)	586, 699, 721, 856, 859, 1532
Bme1390I	CCNGG	2 cut(s)	58, 303
Bme18I	GGWCC	3 cut(s)	151, 232, 478
BmeT110I	CYCGRG	1 cut(s)	1588
BmgT120I	GGNCC	3 cut(s)	151, 232, 478
BmiI	GGNNCC	4 cut(s)	261, 309, 447, 523
BmrFI	CCNGG	2 cut(s)	58, 303
BmsI	GCATC	6 cut(s)	100, 233, 743, 869, 991, 1255
BmtI	GCTAGC	1 cut(s)	1445
BpiI	GAAGAC	1 cut(s)	662
Bpu14I	TTCGAA	2 cut(s)	539, 1060
BpuEI	CTTGAG	2 cut(s)	626, 1312
BsaAI	YACGTR	1 cut(s)	549
BsaJI	CCNNGG	1 cut(s)	302
BsaWI	WCCGGW	1 cut(s)	1239
Bsc4I	CCNNNNNNNGG	4 cut(s)	269, 347, 455, 950
Bse1I	ACTGG	1 cut(s)	149
Bse3DI	GCAATG	2 cut(s)	363, 1284
BseAI	TCCGGA	1 cut(s)	1239
BseBI	CCWGG	2 cut(s)	58, 303
BseDI	CCNNGG	1 cut(s)	302
BseGI	GGATG	3 cut(s)	187, 616, 860
BseLI	CCNNNNNNNGG	4 cut(s)	269, 347, 455, 950
BseMI	GCAATG	2 cut(s)	363, 1284
BseMII	CTCAG	3 cut(s)	771, 792, 1020
BseNI	ACTGG	1 cut(s)	149
BseRI	GAGGAG	1 cut(s)	1606
BseSI	GKGCMC	2 cut(s)	580, 1525
BseXI	GCAGC	6 cut(s)	571, 706, 709, 841, 844, 1542
BseYI	CCCAGC	3 cut(s)	381, 993, 1223
BshFI	GGCC	1 cut(s)	301
BsiHKAI	GWGCWC	2 cut(s)	580, 796
BsiHKCI	CYCGRG	1 cut(s)	1588
BsiSI	CCGG	1 cut(s)	1240
BslFI	GGGAC	3 cut(s)	1064, 1148, 1240
BslI	CCNNNNNNNGG	4 cut(s)	269, 347, 455, 950
BsmAI	GTCTC	2 cut(s)	1374, 1588
BsmBI	CGTCTC	1 cut(s)	1588
BsmFI	GGGAC	3 cut(s)	1064, 1148, 1240
BsmI	GAATGC	2 cut(s)	528, 663
BsnI	GGCC	1 cut(s)	301
BsoBI	CYCGRG	1 cut(s)	1588
Bsp119I	TTCGAA	2 cut(s)	539, 1060
Bsp1286I	GDGCHC	5 cut(s)	310, 388, 580, 796, 1525
Bsp13I	TCCGGA	1 cut(s)	1239
Bsp143I	GATC	1 cut(s)	1584
BspANI	GGCC	1 cut(s)	301
BspCNI	CTCAG	3 cut(s)	770, 793, 1021
BspEI	TCCGGA	1 cut(s)	1239
BspLI	GGNNCC	4 cut(s)	261, 309, 447, 523
BspMAI	CTGCAG	1 cut(s)	210
BspMI	ACCTGC	1 cut(s)	428
BspOI	GCTAGC	1 cut(s)	1445
BspQI	GCTCTTC	1 cut(s)	1494
BspT104I	TTCGAA	2 cut(s)	539, 1060
BsrDI	GCAATG	2 cut(s)	363, 1284
BsrI	ACTGG	1 cut(s)	149
BssECI	CCNNGG	1 cut(s)	302
BssMI	GATC	1 cut(s)	1584
BssSI	CACGAG	1 cut(s)	579
Bst2BI	CACGAG	1 cut(s)	579
Bst2UI	CCWGG	2 cut(s)	58, 303
Bst4CI	ACNGT	6 cut(s)	482, 713, 731, 745, 774, 927
Bst6I	CTCTTC	2 cut(s)	820, 1494
BstAPI	GCANNNNNTGC	2 cut(s)	171, 584
BstBAI	YACGTR	1 cut(s)	549
BstBI	TTCGAA	2 cut(s)	539, 1060
BstC8I	GCNNGC	3 cut(s)	526, 1443, 1506
BstDEI	CTNAG	5 cut(s)	461, 757, 801, 898, 1029
BstENI	CCTNNNNNAGG	1 cut(s)	345
BstF5I	GGATG	3 cut(s)	187, 616, 860
BstH2I	RGCGCY	1 cut(s)	382
BstHHI	GCGC	3 cut(s)	381, 750, 1291
BstKTI	GATC	1 cut(s)	1587
BstMAI	GTCTC	2 cut(s)	1374, 1588
BstMBI	GATC	1 cut(s)	1584
BstMWI	GCNNNNNNNGC	6 cut(s)	171, 392, 584, 697, 854, 1274
BstNI	CCWGG	2 cut(s)	58, 303
BstNSI	RCATGY	1 cut(s)	1449
BstSCI	CCNGG	2 cut(s)	56, 301
BstSFI	CTRYAG	4 cut(s)	206, 636, 967, 1176
BstSLI	GKGCMC	2 cut(s)	580, 1525
BstV1I	GCAGC	6 cut(s)	571, 706, 709, 841, 844, 1542
BstV2I	GAAGAC	1 cut(s)	662
BstX2I	RGATCY	1 cut(s)	1584
BstYI	RGATCY	1 cut(s)	1584
BsuI	GTATCC	1 cut(s)	402
BsuRI	GGCC	1 cut(s)	301
BtsCI	GGATG	3 cut(s)	187, 616, 860
BtsI	GCAGTG	3 cut(s)	172, 215, 665
BtsIMutI	CAGTG	4 cut(s)	172, 215, 539, 665
BveI	ACCTGC	1 cut(s)	428
Cac8I	GCNNGC	3 cut(s)	526, 1443, 1506
CaiI	CAGNNNCTG	2 cut(s)	722, 982
CfoI	GCGC	3 cut(s)	381, 750, 1291
Cfr13I	GGNCC	3 cut(s)	151, 232, 478
Csp6I	GTAC	3 cut(s)	187, 275, 1150
CviAII	CATG	6 cut(s)	178, 236, 1045, 1094, 1138, 1446
CviQI	GTAC	3 cut(s)	187, 275, 1150
DdeI	CTNAG	5 cut(s)	461, 757, 801, 898, 1029
DpnI	GATC	1 cut(s)	1586
DpnII	GATC	1 cut(s)	1584
DraIII	CACNNNGTG	1 cut(s)	575
Eam1104I	CTCTTC	2 cut(s)	820, 1494
EarI	CTCTTC	2 cut(s)	820, 1494
Eco24I	GRGCYC	2 cut(s)	310, 388
Eco32I	GATATC	1 cut(s)	104
Eco47I	GGWCC	3 cut(s)	151, 232, 478
Eco57I	CTGAAG	2 cut(s)	864, 959
Eco88I	CYCGRG	1 cut(s)	1588
EcoNI	CCTNNNNNAGG	1 cut(s)	345
EcoO109I	RGGNCCY	1 cut(s)	151
EcoRI	GAATTC	1 cut(s)	1089
EcoRII	CCWGG	2 cut(s)	56, 301
EcoRV	GATATC	1 cut(s)	104
EcoT38I	GRGCYC	2 cut(s)	310, 388
Esp3I	CGTCTC	1 cut(s)	1588
FaeI	CATG	6 cut(s)	181, 239, 1048, 1097, 1141, 1449
FaqI	GGGAC	3 cut(s)	1064, 1148, 1240
FatI	CATG	6 cut(s)	177, 235, 1044, 1093, 1137, 1445
FauNDI	CATATG	3 cut(s)	404, 517, 1408
FblI	GTMKAC	1 cut(s)	639
Fnu4HI	GCNGC	6 cut(s)	585, 698, 720, 855, 858, 1531
FokI	GGATG	3 cut(s)	194, 623, 847
FriOI	GRGCYC	2 cut(s)	310, 388
Fsp4HI	GCNGC	6 cut(s)	585, 698, 720, 855, 858, 1531
FspBI	CTAG	4 cut(s)	96, 957, 1070, 1442
FspI	TGCGCA	1 cut(s)	1290
GlaI	GCGC	3 cut(s)	380, 749, 1290
GluI	GCNGC	6 cut(s)	585, 698, 720, 855, 858, 1531
GsaI	CCCAGC	3 cut(s)	385, 997, 1227
HaeII	RGCGCY	1 cut(s)	382
HaeIII	GGCC	1 cut(s)	301
HapII	CCGG	1 cut(s)	1240
HhaI	GCGC	3 cut(s)	381, 750, 1291
Hin1II	CATG	6 cut(s)	181, 239, 1048, 1097, 1141, 1449
Hin6I	GCGC	3 cut(s)	379, 748, 1289
HinP1I	GCGC	3 cut(s)	379, 748, 1289
HindIII	AAGCTT	1 cut(s)	1514
HinfI	GANTC	5 cut(s)	468, 1257, 1332, 1419, 1493
HpaII	CCGG	1 cut(s)	1240
HphI	GGTGA	3 cut(s)	557, 1153, 1169
Hpy166II	GTNNAC	6 cut(s)	142, 578, 640, 1152, 1160, 1313
Hpy188I	TCNGA	7 cut(s)	42, 430, 760, 798, 978, 1030, 1498
Hpy188III	TCNNGA	7 cut(s)	107, 311, 1086, 1240, 1329, 1582, 1588
Hpy8I	GTNNAC	6 cut(s)	142, 578, 640, 1152, 1160, 1313
HpyAV	CCTTC	3 cut(s)	142, 688, 983
HpyCH4III	ACNGT	6 cut(s)	482, 713, 731, 745, 774, 927
HpyCH4IV	ACGT	2 cut(s)	34, 548
HpyF10VI	GCNNNNNNNGC	6 cut(s)	171, 392, 584, 697, 854, 1274
HpyF3I	CTNAG	5 cut(s)	461, 757, 801, 898, 1029
HpySE526I	ACGT	2 cut(s)	34, 548
Hsp92II	CATG	6 cut(s)	181, 239, 1048, 1097, 1141, 1449
HspAI	GCGC	3 cut(s)	379, 748, 1289
Kpn2I	TCCGGA	1 cut(s)	1239
Kzo9I	GATC	1 cut(s)	1584
LguI	GCTCTTC	1 cut(s)	1494
LmnI	GCTCC	6 cut(s)	118, 313, 445, 521, 1009, 1192
Lsp1109I	GCAGC	6 cut(s)	571, 706, 709, 841, 844, 1542
LweI	GCATC	6 cut(s)	100, 233, 743, 869, 991, 1255
MaeI	CTAG	4 cut(s)	96, 957, 1070, 1442
MaeII	ACGT	2 cut(s)	34, 548
MaeIII	GTNAC	3 cut(s)	122, 212, 908
MalI	GATC	1 cut(s)	1586
MboI	GATC	1 cut(s)	1584
MboII	GAAGA	5 cut(s)	57, 662, 837, 1409, 1511
MfeI	CAATTG	1 cut(s)	450
MflI	RGATCY	1 cut(s)	1584
MhlI	GDGCHC	5 cut(s)	310, 388, 580, 796, 1525
MluCI	AATT	8 cut(s)	71, 254, 450, 934, 1089, 1207, 1318, 1362
MlyI	GAGTC	2 cut(s)	1266, 1341
MmeI	TCCRAC	1 cut(s)	464
MroI	TCCGGA	1 cut(s)	1239
MroXI	GAANNNNTTC	1 cut(s)	765
MseI	TTAA	7 cut(s)	435, 866, 1299, 1344, 1386, 1482, 1538
MslI	CAYNNNNRTG	2 cut(s)	180, 1308
MspA1I	CMGCKG	1 cut(s)	719
MspI	CCGG	1 cut(s)	1240
MspR9I	CCNGG	2 cut(s)	58, 303
MunI	CAATTG	1 cut(s)	450
Mva1269I	GAATGC	2 cut(s)	528, 663
MvaI	CCWGG	2 cut(s)	58, 303
MwoI	GCNNNNNNNGC	6 cut(s)	171, 392, 584, 697, 854, 1274
NdeI	CATATG	3 cut(s)	404, 517, 1408
NdeII	GATC	1 cut(s)	1584
NheI	GCTAGC	1 cut(s)	1441
NlaIII	CATG	6 cut(s)	181, 239, 1048, 1097, 1141, 1449
NlaIV	GGNNCC	4 cut(s)	261, 309, 447, 523
NmuCI	GTSAC	1 cut(s)	212
NsbI	TGCGCA	1 cut(s)	1290
NspI	RCATGY	1 cut(s)	1449
NspV	TTCGAA	2 cut(s)	539, 1060
OliI	CACNNNNGTG	1 cut(s)	1308
PaeR7I	CTCGAG	1 cut(s)	1588
PciSI	GCTCTTC	1 cut(s)	1494
PcsI	WCGNNNNNNNCGW	1 cut(s)	545
PctI	GAATGC	2 cut(s)	528, 663
PdmI	GAANNNNTTC	1 cut(s)	765
PfeI	GAWTC	3 cut(s)	468, 1419, 1493
PflMI	CCANNNNNTGG	1 cut(s)	455
PkrI	GCNGC	6 cut(s)	586, 699, 721, 856, 859, 1532
PleI	GAGTC	2 cut(s)	1265, 1340
PpsI	GAGTC	2 cut(s)	1265, 1340
Ppu21I	YACGTR	1 cut(s)	549
PpuMI	RGGWCCY	1 cut(s)	151
PshBI	ATTAAT	1 cut(s)	1299
Psp5II	RGGWCCY	1 cut(s)	151
Psp6I	CCWGG	2 cut(s)	56, 301
PspFI	CCCAGC	3 cut(s)	381, 993, 1223
PspGI	CCWGG	2 cut(s)	56, 301
PspN4I	GGNNCC	4 cut(s)	261, 309, 447, 523
PspPI	GGNCC	3 cut(s)	151, 232, 478
PspPPI	RGGWCCY	1 cut(s)	151
PsrI	GAACNNNNNNTAC	2 cut(s)	1558, 1590
PstI	CTGCAG	1 cut(s)	210
PstNI	CAGNNNCTG	2 cut(s)	722, 982
PsuI	RGATCY	1 cut(s)	1584
PvuII	CAGCTG	1 cut(s)	719
RsaI	GTAC	3 cut(s)	188, 276, 1151
RsaNI	GTAC	3 cut(s)	187, 275, 1150
RseI	CAYNNNNRTG	2 cut(s)	180, 1308
SapI	GCTCTTC	1 cut(s)	1494
SaqAI	TTAA	7 cut(s)	435, 866, 1299, 1344, 1386, 1482, 1538
SatI	GCNGC	6 cut(s)	585, 698, 720, 855, 858, 1531
Sau3AI	GATC	1 cut(s)	1584
Sau96I	GGNCC	3 cut(s)	151, 232, 478
SchI	GAGTC	2 cut(s)	1266, 1341
ScrFI	CCNGG	2 cut(s)	58, 303
SduI	GDGCHC	5 cut(s)	310, 388, 580, 796, 1525
SfaNI	GCATC	6 cut(s)	100, 233, 743, 869, 991, 1255
SfcI	CTRYAG	4 cut(s)	206, 636, 967, 1176
Sfr274I	CTCGAG	1 cut(s)	1588
SfuI	TTCGAA	2 cut(s)	539, 1060
SinI	GGWCC	3 cut(s)	151, 232, 478
SlaI	CTCGAG	1 cut(s)	1588
SmiMI	CAYNNNNRTG	2 cut(s)	180, 1308
SmlI	CTYRAG	3 cut(s)	605, 1327, 1588
SmoI	CTYRAG	3 cut(s)	605, 1327, 1588
Sse9I	AATT	8 cut(s)	71, 254, 450, 934, 1089, 1207, 1318, 1362
SspMI	CTAG	4 cut(s)	96, 957, 1070, 1442
StyD4I	CCNGG	2 cut(s)	56, 301
TaaI	ACNGT	6 cut(s)	482, 713, 731, 745, 774, 927
TaiI	ACGT	2 cut(s)	37, 551
TaqI	TCGA	5 cut(s)	106, 539, 882, 1060, 1589
TasI	AATT	8 cut(s)	71, 254, 450, 934, 1089, 1207, 1318, 1362
TatI	WGTACW	1 cut(s)	1149
TfiI	GAWTC	3 cut(s)	468, 1419, 1493
Tru1I	TTAA	7 cut(s)	435, 866, 1299, 1344, 1386, 1482, 1538
Tru9I	TTAA	7 cut(s)	435, 866, 1299, 1344, 1386, 1482, 1538
TscAI	CASTG	4 cut(s)	172, 215, 539, 665
TseFI	GTSAC	1 cut(s)	212
TseI	GCWGC	6 cut(s)	584, 697, 719, 854, 857, 1530
Tsp45I	GTSAC	1 cut(s)	212
TspDTI	ATGAA	9 cut(s)	374, 504, 663, 1082, 1189, 1200, 1266, 1449, 1566
TspGWI	ACGGA	1 cut(s)	1612
TspRI	CASTG	4 cut(s)	172, 215, 539, 665
Van91I	CCANNNNNTGG	1 cut(s)	455
VneI	GTGCAC	1 cut(s)	576
VpaK11BI	GGWCC	3 cut(s)	151, 232, 478
VspI	ATTAAT	1 cut(s)	1299
XagI	CCTNNNNNAGG	1 cut(s)	345
XapI	RAATTY	1 cut(s)	1089
XceI	RCATGY	1 cut(s)	1449
XhoI	CTCGAG	1 cut(s)	1588
XmiI	GTMKAC	1 cut(s)	639
XmnI	GAANNNNTTC	1 cut(s)	765
XspI	CTAG	4 cut(s)	96, 957, 1070, 1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.